isoform	chrom	strand	length	exons	structural_category	associated_gene	associated_transcript	ref_length	ref_exons	diff_to_TSS	diff_to_TTS	diff_to_gene_TSS	diff_to_gene_TTS	subcategory	RTS_stage	all_canonical	min_sample_cov	min_cov	min_cov_pos	sd_cov	FL	n_indels	n_indels_junc	bite	iso_exp	gene_exp	ratio_exp	FSM_class	coding	ORF_length	CDS_length	CDS_start	CDS_end	CDS_genomic_start	CDS_genomic_end	predicted_NMD	perc_A_downstream_TTS	seq_A_downstream_TTS	dist_to_cage_peak	within_cage_peak	pos_cage_peak	dist_to_polya_site	within_polya_site	polyA_motif	polyA_dist	ORF_seq	TSS_genomic_coord	TTS_genomic_coord	experiment_id	entry_id	LRGASP_id
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000008	chr1	-	177	1	Intergenic	novelGene_1	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	270	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTTTTCACTGGGAAGG	NA	False	NA	-1	True	NA	NA	NA	4835416	4835239	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_4835200_4835400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000043	chr1	+	196	1	Intergenic	novelGene_2	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCAAAAATCACAAGCCGG	NA	False	NA	NA	False	NA	NA	NA	4942371	4942567	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_4942400_4942600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000071	chr1	+	1844	13	FSM	ENSMUSG00000033793.13	ENSMUST00000192698.3	1811	13	-4	-29	-4	29	multi-exon	FALSE	canonical	3	60	junction_6	140.296783640966	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTCTTAAATTTTGCTT	NA	False	NA	17	True	ATTAAA	-17	NA	5153372	5232671	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_5153502_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000082	chr1	-	177	1	Intergenic	novelGene_3	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAGGAAGATATAA	NA	False	NA	NA	False	NA	NA	NA	6278450	6278273	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_6278300_6278400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000084	chr1	+	6003	15	ISM	ENSMUSG00000025907.15	ENSMUST00000027040.13	7607	24	-12	24766	-12	624	5prime_fragment	FALSE	canonical	3	127	junction_3	10.2869542903344	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGTTTCACATGATGC	NA	False	NA	NA	False	AATAAA	-25	NA	6284856	6322106	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000090	chr1	+	6128	24	FSM	ENSMUSG00000025907.15	ENSMUST00000027040.13	7607	24	-1	1480	-1	-407	multi-exon	FALSE	canonical	3	76	junction_19	28.8457209021846	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGCCTTTTAAAGGT	NA	False	NA	NA	False	AATAAA	-17	NA	6284867	6345392	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6338921_6338981_6340914_6341052_6342924_6342996_6344421
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000106	chr1	-	179	1	Intergenic	novelGene_4	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAATGTGGATTCTGGG	NA	False	NA	NA	False	NA	NA	NA	6417523	6417344	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_6417300_6417500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000114	chr1	+	177	1	Intergenic	novelGene_5	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATAGATATTCAA	NA	False	NA	NA	False	NA	NA	NA	7067204	7067381	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_7067200_7067400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000124	chr1	+	213	1	Intergenic	novelGene_6	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTATTGGTAGGCACTG	5069	False	NA	NA	False	NA	NA	NA	7116722	7116935	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_7116700_7116900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000151	chr1	+	195	1	Intergenic	novelGene_7	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGTAAACACAAGATAGT	NA	False	NA	NA	False	NA	NA	NA	8560275	8560470	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_8560300_8560500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000161	chr1	+	188	1	Intergenic	novelGene_8	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAATTTTTGCTATCTTA	NA	False	NA	NA	False	NA	NA	NA	9321221	9321409	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_9321200_9321400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000169	chr1	+	199	1	Intergenic	novelGene_9	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	456	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTGCAGGAAAACACAAC	6233	False	NA	NA	False	NA	NA	NA	9456824	9457023	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_9456800_9457000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000180	chr1	+	2075	1	FSM	ENSMUSG00000061024.9	ENSMUST00000072079.9	2048	1	-24	-3	-24	3	mono-exon	FALSE	NA	NA	NA	NA	NA	653	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTATTTTTGTAAGT	NA	False	NA	22	True	AATAAA	-22	NA	9615608	9617683	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_9615600_9617700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000192	chr1	+	1841	13	FSM	ENSMUSG00000025911.15	ENSMUST00000027044.15	2022	13	18	163	18	-163	multi-exon	FALSE	canonical	0	0	junction_3	21.4416197045735	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCTGTTTCATAAAAGC	NA	False	NA	NA	False	AATAAA	-23	NA	9618297	9646963	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_9618377_9620131_9620170_9623147_9623202_9623542_9623698_9623847_9624045_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000202	chr1	+	177	1	Intergenic	novelGene_10	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTTTTTTAAAGTTAT	NA	False	NA	NA	False	NA	NA	NA	9777917	9778094	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_9777900_9778100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000211	chr1	-	5233	3	FSM	ENSMUSG00000045210.9	ENSMUST00000057438.7	9749	3	-54	4570	-54	-4570	multi-exon	FALSE	canonical	3	96	junction_2	5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCTGTTCATTCGAA	NA	False	NA	NA	False	AATACA	-21	NA	9818661	9793416	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_9795576_9807190_9807278_9815674
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000217	chr1	+	202	1	Intergenic	novelGene_11	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAAGCCTCCATTATATC	3987	False	NA	NA	False	NA	NA	NA	9810997	9811199	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_9811000_9811200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000223	chr1	+	180	1	Intergenic	novelGene_12	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAAGCCGGGCGGTGGTG	NA	False	NA	NA	False	NA	NA	NA	9833778	9833958	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_9833800_9834000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000231	chr1	+	206	1	Intergenic	novelGene_13	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTTTTAAAAAACAACAATA	8118	False	NA	NA	False	NA	NA	NA	9844168	9844374	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_9844200_9844400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000254	chr1	-	403	4	FSM	ENSMUSG00000098234.8	ENSMUST00000182742.2	400	4	-1	-2	0	0	multi-exon	FALSE	canonical	3	144	junction_1	223.143202649977	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTGGGCAGTAATTTC	NA	False	NA	-13	True	AATAAA	-14	NA	10014343	10012247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_10012375_10012547_10012617_10012834_10012943_10014244
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000257	chr1	-	409	4	FSM	ENSMUSG00000098234.8	ENSMUST00000182580.8	473	4	0	64	0	0	multi-exon	TRUE	canonical	3	370	junction_3	129.892263049036	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTGGGCAGTAATTTC	NA	False	NA	-13	True	AATAAA	-14	NA	10014343	10012247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_10012381_10012547_10012617_10012834_10012943_10014244
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000259	chr1	-	1756	3	FSM	ENSMUSG00000098234.8	ENSMUST00000182819.8	816	3	-940	0	-45	0	multi-exon	FALSE	canonical	3	538	junction_1	75	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTGGGCAGTAATTTC	NA	False	NA	-13	True	AATAAA	-14	NA	10014388	10012247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_10012381_10012547_10012617_10012834
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000286	chr1	+	183	1	Intergenic	novelGene_14	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGCACTTGAAATAATAA	7217	False	NA	NA	False	NA	NA	NA	10066480	10066663	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_10066500_10066700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000295	chr1	-	1314	8	NIC	ENSMUSG00000025917.10	novel	1698	8	NA	NA	-14	18	combination_of_known_junctions	FALSE	canonical	3	100	junction_7	313.343653036022	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTGGTTTTGTAGTTG	NA	False	NA	-7	True	AATAAA	-20	NA	10108184	10095049	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10107886
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000304	chr1	-	1257	8	NIC	ENSMUSG00000025917.10	novel	1698	8	NA	NA	4	13	combination_of_known_junctions	FALSE	canonical	3	86	junction_7	318.204272730071	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCCTTCTGTGGTTTTGT	NA	False	NA	-12	True	AATAAA	-15	NA	10108389	10095054	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10108143
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000313	chr1	+	4356	30	FSM	ENSMUSG00000056763.17	ENSMUST00000071087.12	4355	30	0	-1	0	1	multi-exon	FALSE	canonical	2	35	junction_1	28.6386316840114	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCAGTGTCGGTTTCTTTC	NA	False	NA	5	True	AATAAA	-18	NA	10108441	10206994	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_10108570_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000353	chr1	+	180	1	Intergenic	novelGene_15	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAGAGAGAACAGAA	NA	False	NA	NA	False	NA	NA	NA	10677665	10677845	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_10677700_10677800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000363	chr1	-	202	1	Intergenic	novelGene_16	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAATTCTCTGTTTAGCT	NA	False	NA	NA	False	NA	NA	NA	11512205	11512003	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_11512000_11512200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000375	chr1	+	237	1	Intergenic	novelGene_17	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTTAAACTATTGCTTTA	NA	False	NA	NA	False	AAGAAA	-38	NA	12705425	12705662	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_12705400_12705700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000386	chr1	-	179	1	Intergenic	novelGene_18	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGAGAGCTGTAGGTTTT	7702	False	NA	NA	False	NA	NA	NA	13088405	13088226	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_13088200_13088400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000388	chr1	+	208	1	Intergenic	novelGene_19	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATAGTACGGGGCTGGTG	NA	False	NA	NA	False	NA	NA	NA	13121896	13122104	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_13121900_13122100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000401	chr1	+	180	1	Intergenic	novelGene_20	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAGAAAGAAATAGT	NA	False	NA	NA	False	NA	NA	NA	13122114	13122294	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_13122100_13122300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000407	chr1	+	186	1	Intergenic	novelGene_21	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCGTGTGTGCCTGTGTGT	NA	False	NA	9	True	NA	NA	NA	13140119	13140305	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_13140100_13140300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000409	chr1	+	169	1	Intergenic	novelGene_22	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTTTTTTTTGTTT	NA	False	NA	10	True	NA	NA	NA	13160435	13160604	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_13160400_13160600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000418	chr1	-	2643	8	NNC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	-834	32	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_7	143.424871893096	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTTCCTCTTTTCTTTC	NA	False	NA	-26	True	AATAAA	-42	NA	13198221	13183648	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13198120
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000420	chr1	-	4683	7	ISM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	-834	-32	-834	32	intron_retention	FALSE	canonical	3	343	junction_5	37.0135110466435	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTTCCTCTTTTCTTTC	NA	False	NA	-26	True	AATAAA	-42	NA	13198221	13183648	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000424	chr1	-	3434	8	NNC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	-834	32	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_7	143.424871893096	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTTCCTCTTTTCTTTC	NA	False	NA	-26	True	AATAAA	-42	NA	13198221	13183648	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13197329
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000435	chr1	+	178	1	Intergenic	novelGene_23	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAACACAGACTGTGAT	NA	False	NA	NA	False	NA	NA	NA	13188443	13188621	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_13188400_13188600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000448	chr1	+	180	1	Intergenic	novelGene_24	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAGAAGCAGAAAGGTT	NA	False	NA	NA	False	NA	NA	NA	13421527	13421707	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_13421500_13421700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000455	chr1	+	177	1	Intergenic	novelGene_25	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAACTGAGTAGTA	NA	False	NA	NA	False	NA	NA	NA	13447654	13447831	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_13447700_13447800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000464	chr1	+	199	1	Intergenic	novelGene_26	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGTAGGCAGTGTTTGA	NA	False	NA	NA	False	NA	NA	NA	13586269	13586468	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_13586300_13586500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000467	chr1	-	2927	11	FSM	ENSMUSG00000025935.11	ENSMUST00000027068.11	2938	11	16	-5	16	5	multi-exon	FALSE	canonical	3	1226	junction_5	62.5811473208985	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTATTTTTTGTAAGCAAA	9672	False	NA	-4	True	ATTAAA	-20	NA	13660118	13634916	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13659823
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000476	chr1	-	1541	1	ISM	ENSMUSG00000025935.11	ENSMUST00000027068.11	2938	11	23590	82	13478	-82	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTGTTTCCTGAACAAT	NA	False	NA	-7	True	AATAAA	-16	NA	13636544	13635003	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr1_-_13635000_13636500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000482	chr1	-	2982	7	FSM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	-3	1515	-3	-1515	multi-exon	FALSE	canonical	3	2151	junction_5	155.94015946296	1154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTCTCATCTTTAACCA	NA	False	NA	NA	False	NA	NA	NA	13730773	13695068	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000492	chr1	-	3378	6	NIC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	52	-1515	intron_retention	FALSE	canonical	3	2151	junction_4	166.606842596575	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTCTCATCTTTAACCA	NA	False	NA	NA	False	NA	NA	NA	13730718	13695068	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_-_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000524	chr1	+	184	1	Intergenic	novelGene_27	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAGATTGAAAATATTGA	3074	False	NA	NA	False	NA	NA	NA	16056373	16056557	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_16056400_16056600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000535	chr1	-	955	7	FSM	ENSMUSG00000043716.14	ENSMUST00000058437.14	1163	7	208	0	-52	0	multi-exon	FALSE	canonical	3	5309	junction_1	773.772953348289	972	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGAGTCTTTGTTGG	NA	False	NA	-5	True	AATAAA	-25	NA	16174678	16171518	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_16171584_16171950_16172161_16172713_16172824_16172915_16173054_16173391_16173559_16173733_16173909_16174588
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000546	chr1	+	159	1	Intergenic	novelGene_28	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAGAGGAGAAGCTTAA	NA	False	NA	NA	False	NA	NA	NA	16373824	16373983	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_16373800_16374000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000560	chr1	-	3001	11	FSM	ENSMUSG00000025920.20	ENSMUST00000162007.8	2964	11	-37	0	-7	0	multi-exon	FALSE	canonical	3	67	junction_9	11.3207773584679	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTGATTCATATAGTGA	NA	False	NA	NA	False	AATAAA	-18	NA	16589501	16414514	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16579565_16579633_16589396
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000578	chr1	-	1530	6	NIC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	-9	-351	combination_of_known_junctions	FALSE	canonical	3	127	junction_3	123.769139933992	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGGACATTTTTATTT	NA	False	NA	NA	False	AATACA	-32	NA	16689492	16640356	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_-_16641507_16652150_16652227_16655499_16655577_16668174_16668278_16672485_16672578_16689460
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000596	chr1	-	2000	4	FSM	ENSMUSG00000079658.10	ENSMUST00000115352.10	960	4	0	-1040	0	-2	multi-exon	TRUE	canonical	3	1066	junction_3	717.825574603995	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGATCAGCACTTGGTCTT	NA	False	NA	-2	True	AATAAA	-21	NA	16727266	16711950	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727215
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000602	chr1	-	2017	4	FSM	ENSMUSG00000079658.10	ENSMUST00000188641.7	2014	4	-7	4	-7	-4	multi-exon	FALSE	canonical	3	1161	junction_3	673.864641864785	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACGATCAGCACTTGGTC	NA	False	NA	-4	True	AATAAA	-19	NA	16727115	16711952	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727045
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000614	chr1	+	192	1	Intergenic	novelGene_29	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGCTTTTATATACCTC	6803	False	NA	NA	False	NA	NA	NA	16716278	16716470	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_16716300_16716500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000621	chr1	+	1739	3	FSM	ENSMUSG00000025940.7	ENSMUST00000065373.6	1710	3	-27	-2	-24	2	multi-exon	FALSE	canonical	3	512	junction_1	10.5	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTTTTGTTTGCCTCCA	NA	False	NA	24	True	ATTAAA	-14	NA	16735406	16748501	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_16735730_16737891_16737998_16747191
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000642	chr1	-	3422	17	FSM	ENSMUSG00000041859.11	ENSMUST00000053266.11	3031	17	21	-412	21	412	multi-exon	FALSE	canonical	3	2257	junction_11	181.480370839383	1264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGTCCCTTTGTCCTTC	NA	False	NA	2	True	AATAAA	-24	NA	20890515	20872779	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000651	chr1	+	2221	11	FSM	ENSMUSG00000041809.6	ENSMUST00000038447.6	2146	11	-75	0	-13	0	multi-exon	FALSE	canonical	3	9	junction_5	4.06939798987516	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGTGCCTTATTTGGAG	NA	False	NA	12	True	NA	NA	NA	21021836	21061065	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_21022021_21025558_21025781_21030353_21030642_21031376_21031527_21037547_21037741_21042998_21043220_21045122_21045264_21048866_21049081_21049633_21049782_21059591_21059827_21060840
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000657	chr1	-	1435	11	FSM	ENSMUSG00000041779.6	ENSMUST00000037998.6	6492	11	-15	5072	-15	2942	multi-exon	FALSE	canonical	3	66	junction_1	7.25534285888682	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCCTGAGCCGCCAGAT	NA	False	NA	-2	True	AATAAA	-21	NA	21149468	21071594	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_21071860_21073193_21073358_21074061_21074206_21074449_21074555_21075790_21075862_21076373_21076459_21077076_21077136_21083016_21083134_21083625_21083736_21107620_21107685_21149217
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000673	chr1	-	187	1	Antisense	novelGene_ENSMUSG00000102633.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACCACAGTTGATTTTCA	NA	False	NA	NA	False	NA	NA	NA	21306602	21306415	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr1_-_21306400_21306600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000688	chr1	+	195	1	Intergenic	novelGene_30	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTGGCAATCATGCCAG	NA	False	NA	NA	False	NA	NA	NA	21405207	21405402	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_21405200_21405400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000700	chr1	+	244	1	Intergenic	novelGene_31	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	252	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGACCAGGCTCTCATAT	NA	False	NA	NA	False	AAAACA	-37	NA	22446157	22446401	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_22446200_22446400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000707	chr1	-	3822	1	Intergenic	novelGene_32	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTTTGTTGCGTCT	NA	False	NA	NA	False	NA	NA	NA	23825272	23821450	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_23821400_23825300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000724	chr1	+	191	1	Intergenic	novelGene_33	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATTAGTCTGCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	23895716	23895907	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_23895700_23895900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000733	chr1	-	94	1	ISM	ENSMUSG00000026154.5	ENSMUST00000027338.4	683	3	9618	6	9592	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAGATTTATTATTTTA	NA	False	NA	-7	True	AATAAA	-17	NA	24035119	24035025	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr1_-_24035000_24035100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000746	chr1	-	2044	1	FSM	ENSMUSG00000101111.2	ENSMUST00000190277.2	783	1	-843	-418	-843	418	mono-exon	FALSE	NA	NA	NA	NA	NA	3548	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGTAATTAGTTTAAAAAAA	NA	False	NA	NA	False	AGTAAA	-1	NA	24653895	24651851	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_24651900_24653900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000761	chr1	-	690	1	FSM	ENSMUSG00000102070.2	ENSMUST00000188231.2	681	1	-1	-8	-1	8	mono-exon	FALSE	NA	NA	NA	NA	NA	848	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGAAGCTAAGAGCGTTA	NA	False	NA	NA	False	ACTAAA	-40	NA	24654647	24653957	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_24654000_24654600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000784	chr1	+	202	1	Intergenic	novelGene_34	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAAATTCTACTATC	NA	False	NA	NA	False	NA	NA	NA	25093346	25093548	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_25093300_25093500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000790	chr1	+	196	1	Intergenic	novelGene_35	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAAATAGCTAATTATT	NA	False	NA	NA	False	NA	NA	NA	28380257	28380453	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_28380300_28380500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000802	chr1	+	217	1	Intergenic	novelGene_36	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAACTACACTCTATA	NA	False	NA	NA	False	TTTAAA	-10	NA	28488030	28488247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_28488000_28488200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000817	chr1	-	7127	16	FSM	ENSMUSG00000048874.16	ENSMUST00000186733.7	7567	16	-324	764	-11	443	multi-exon	FALSE	canonical	3	122	junction_14	21.375375240371	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTGTGTGATTTGAA	NA	False	NA	-1	True	GATAAA	-16	NA	30912986	30842183	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30902067_30902337_30912658
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000829	chr1	-	4143	6	FSM	ENSMUSG00000117310.3	ENSMUST00000233506.2	4145	6	1	1	1	0	multi-exon	FALSE	canonical	3	1976	junction_5	190.472465201666	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTGTTTCTGCATTTG	NA	False	NA	-1	True	ATTAAA	-18	NA	30988850	30979383	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018_30984112_30985118_30985721_30988629
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000843	chr1	-	2851	6	FSM	ENSMUSG00000117310.3	ENSMUST00000076587.6	2851	6	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_5	787.975024984929	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCCTTTTCCTAGTTCA	NA	False	NA	NA	False	AATAAA	-24	NA	30988838	30980660	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018_30984112_30985118_30985718_30988629
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000852	chr1	+	190	1	Intergenic	novelGene_37	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAACAACAAAATCGCAG	NA	False	NA	NA	False	NA	NA	NA	33029836	33030026	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_33029800_33030000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000862	chr1	-	1974	14	FSM	ENSMUSG00000026134.12	ENSMUST00000027312.11	1975	14	3	-2	3	2	multi-exon	FALSE	canonical	3	132	junction_10	82.0868352460372	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCAAGTGGGAGTCTT	NA	False	NA	0	True	AATAAA	-20	NA	33708873	33492888	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_33493386_33503133_33503203_33519538_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33667475_33667614_33669418_33669515_33701326_33701448_33702857_33702938_33706125_33706230_33707938_33708102_33708704
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000892	chr1	+	184	1	Intergenic	novelGene_38	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGACCTCATAAAATTGCA	5824	False	NA	NA	False	NA	NA	NA	33744765	33744949	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_33744800_33744900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000900	chr1	+	200	1	Intergenic	novelGene_39	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTGCTTGAAGCAACAAG	NA	False	NA	NA	False	NA	NA	NA	33757020	33757220	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_33757000_33757200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000913	chr1	+	4321	8	FSM	ENSMUSG00000004768.15	ENSMUST00000088287.10	4322	8	1	0	1	0	multi-exon	FALSE	canonical	2	71	junction_6	20.1190335305671	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTGTGTGTGGTGTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	33758976	33781645	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_33759255_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000923	chr1	+	195	1	Intergenic	novelGene_40	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGAGGAAATTGACTTTC	NA	False	NA	NA	False	NA	NA	NA	33761854	33762049	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_33761900_33762000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000939	chr1	-	4009	15	FSM	ENSMUSG00000042197.14	ENSMUST00000019861.13	3958	15	-50	-1	-7	1	multi-exon	FALSE	canonical	3	234	junction_7	31.7753594690564	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGGAAATTTTTTCTAT	NA	False	NA	-1	True	AATAAA	-18	NA	33853658	33800624	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000961	chr1	+	179	1	Intergenic	novelGene_41	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAGAATTCTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33888547	33888726	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_33888500_33888700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000972	chr1	+	188	1	Intergenic	novelGene_42	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGATGGGGTCCTCAGCAG	6699	False	NA	NA	False	NA	NA	NA	34131323	34131511	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_34131300_34131500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000981	chr1	+	173	1	Intergenic	novelGene_43	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTAAAAAAAAAAAGAGGTT	4697	False	NA	NA	False	NA	NA	NA	34168346	34168519	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_34168300_34168500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000982	chr1	-	185	1	FSM	ENSMUSG00000096992.4	ENSMUST00000187268.2	3416	1	3250	-19	3075	19	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTACAAAAATGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	34214277	34214092	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_34214100_34214300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000000987	chr1	-	1405	5	FSM	ENSMUSG00000042111.10	ENSMUST00000042493.10	1705	5	300	0	300	0	multi-exon	FALSE	canonical	3	256	junction_1	5.33853912601566	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCTCTCATTTTATTTT	7504	False	NA	1	True	AATAAA	-23	NA	34478453	34475750	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_34476692_34476807_34476940_34477930_34478014_34478123_34478228_34478308
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001000	chr1	+	1471	9	FSM	ENSMUSG00000026127.14	ENSMUST00000027303.14	5836	9	2	4363	2	479	multi-exon	FALSE	canonical	3	439	junction_1	56.5552826887109	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTTGTTTGTTTTGTGA	5615	False	NA	49	True	NA	NA	NA	34478933	34484074	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_34479009_34479121_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276_34483351_34483438
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001012	chr1	+	187	1	Intergenic	novelGene_44	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCAGAAAGCTTTGCCA	NA	False	NA	NA	False	NA	NA	NA	34568101	34568288	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_34568100_34568300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001018	chr1	+	177	1	Intergenic	novelGene_45	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTGAGTAGGGCCGGAGT	NA	False	NA	NA	False	NA	NA	NA	34835607	34835784	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_34835600_34835800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001047	chr1	-	5003	7	FSM	ENSMUSG00000037503.13	ENSMUST00000170092.8	941	7	-53	-4009	-4	0	multi-exon	FALSE	canonical	3	35	junction_3	164.703521516694	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGACCTTTTCGTGGG	NA	False	NA	-7	True	AATAAA	-18	NA	34882098	34852306	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_34856486_34857077_34857208_34858672_34858872_34858947_34859091_34867847_34867929_34875813_34875895_34881908
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001056	chr1	+	3332	8	FSM	ENSMUSG00000026123.12	ENSMUST00000027297.11	3279	8	-48	-5	-32	5	multi-exon	FALSE	canonical	3	235	junction_4	21.365621823817	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATTGTGACTTCTGTCG	NA	False	NA	23	True	ATTAAA	-23	NA	34889024	34918666	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_34889145_34900953_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001064	chr1	+	3436	8	NNC	ENSMUSG00000026123.12	novel	302	2	NA	NA	8616	5	intron_retention	FALSE	canonical	3	35	junction_1	85.0965837823621	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATTGTGACTTCTGTCG	NA	False	NA	23	True	ATTAAA	-23	NA	34899533	34918666	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr1_+_34899758_34900953_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001071	chr1	+	3563	8	NNC	ENSMUSG00000026123.12	novel	302	2	NA	NA	8616	5	intron_retention	FALSE	canonical	3	27	junction_1	87.8121836184293	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATTGTGACTTCTGTCG	NA	False	NA	23	True	ATTAAA	-23	NA	34899533	34918666	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr1_+_34899885_34900953_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001076	chr1	+	198	1	Intergenic	novelGene_46	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCACTGGATGGTTTTTAC	NA	False	NA	NA	False	NA	NA	NA	34985329	34985527	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_34985300_34985500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001083	chr1	+	201	1	Intergenic	novelGene_47	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCAAAACGGGCTGGAG	NA	False	NA	NA	False	NA	NA	NA	36019589	36019790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_36019600_36019800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001093	chr1	+	222	1	Intergenic	novelGene_48	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	571	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTAACAAAGCATAG	NA	False	NA	NA	False	AAAAAG	-18	NA	36090763	36090985	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_36090800_36091000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001105	chr1	+	3795	2	FSM	ENSMUSG00000045216.8	ENSMUST00000088174.4	3719	2	-75	-1	-75	1	multi-exon	FALSE	canonical	3	381	junction_1	0	381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTGTGGTCTGTGGT	1688	False	NA	21	True	AATAAA	-16	NA	36107405	36145528	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_36108266_36142593
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001118	chr1	-	5588	41	FSM	ENSMUSG00000037470.15	ENSMUST00000046875.14	9033	41	-10	3455	-10	0	multi-exon	FALSE	canonical	3	131	junction_21	76.4630261956719	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTTTTCTTCTTAC	NA	False	NA	-1	True	NA	NA	NA	36283396	36182562	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36215856_36215881_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001127	chr1	-	5564	40	NIC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	115	junction_20	72.0100347306307	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTTTTCTTCTTAC	NA	False	NA	-1	True	NA	NA	NA	36283396	36182562	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001140	chr1	+	193	1	Intergenic	novelGene_49	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGGAACAGGAGCA	4853	False	NA	NA	False	NA	NA	NA	36313127	36313320	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_36313100_36313300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001143	chr1	+	203	1	Intergenic	novelGene_50	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCCACACACATTAAACAAA	NA	False	NA	NA	False	NA	NA	NA	36344697	36344900	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_36344700_36344900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001192	chr1	-	2246	8	FSM	ENSMUSG00000001143.14	ENSMUST00000125304.8	3378	8	14	1118	0	3	multi-exon	FALSE	canonical	3	121	junction_1	29.2707278728098	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGCTCAGTGGCCTTC	NA	False	NA	0	True	CATAAA	-24	NA	36484338	36462263	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001201	chr1	+	4174	8	FSM	ENSMUSG00000001138.14	ENSMUST00000001166.14	5193	8	0	1019	0	-1019	multi-exon	FALSE	canonical	3	58	junction_3	12.7918979460135	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGTGTGAAGACTGGTGT	NA	False	NA	30	True	NA	NA	NA	36550947	36566299	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_36552235_36558032_36558177_36559158_36559309_36559599_36559770_36559899_36559997_36560285_36560420_36560781_36560921_36564246
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001205	chr1	+	4148	8	NNC	ENSMUSG00000001138.14	novel	5193	8	NA	NA	21	-1021	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	25.5957585772107	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACGGTGTGAAGACTGGT	NA	False	NA	28	True	NA	NA	NA	36550968	36566297	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr1_+_36552235_36558032_36558177_36559161_36559309_36559599_36559770_36559899_36559997_36560285_36560420_36560781_36560921_36564246
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001217	chr1	+	201	1	Intergenic	novelGene_51	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAACAACAACAACCAGA	NA	False	NA	NA	False	NA	NA	NA	36583553	36583754	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_36583600_36583800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001226	chr1	-	2236	15	FSM	ENSMUSG00000046337.18	ENSMUST00000170295.8	2286	15	44	6	44	-2	multi-exon	FALSE	canonical	3	61	junction_5	44.2795502622663	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGGTTCTGGAGTTCCT	NA	False	NA	-3	True	ATTAAA	-16	NA	36722220	36601778	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_36602102_36603410_36603564_36603911_36603990_36617599_36617726_36624996_36625085_36639203_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36698444_36698507_36699815_36700131_36721948
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001283	chr1	+	180	1	Intergenic	novelGene_52	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAATGCCTTCGGTGTGT	NA	False	NA	NA	False	NA	NA	NA	36830368	36830548	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_36830400_36830500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001300	chr1	-	6594	41	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-99	-3	at_least_one_novel_splicesite	TRUE	canonical	3	30	junction_6	55.9871413808564	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGAATTGTTTTGTTTT	7122	False	NA	-4	True	AATAAA	-19	NA	36978707	36831277	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835361_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001318	chr1	+	182	1	Intergenic	novelGene_53	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTGTTTTTGTACAAAC	NA	False	NA	NA	False	NA	NA	NA	36937778	36937960	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_36937800_36938000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001326	chr1	-	3831	3	FSM	ENSMUSG00000026112.8	ENSMUST00000027286.7	3863	3	32	0	32	0	multi-exon	FALSE	canonical	3	395	junction_2	27.5	225	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTCTGTTTCAAGATTA	6304	False	NA	-3	True	NA	NA	NA	37469152	37456164	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_37459709_37467422_37467507_37468949
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001348	chr1	+	1059	6	FSM	ENSMUSG00000026111.16	ENSMUST00000114925.10	1094	6	38	-3	0	0	multi-exon	FALSE	canonical	3	315	junction_1	76.7739539166767	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACTGTTTATTTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	37469257	37478068	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_37469364_37470373_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001351	chr1	+	1267	6	FSM	ENSMUSG00000026111.16	ENSMUST00000027285.13	1414	6	10	137	3	0	multi-exon	FALSE	canonical	3	180	junction_1	129.498416978741	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACTGTTTATTTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	37469260	37478068	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_37469575_37470373_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001358	chr1	+	2255	5	ISM	ENSMUSG00000026111.16	ENSMUST00000114925.10	1094	6	45	-3	-2	0	intron_retention	FALSE	canonical	3	315	junction_1	77.3413699128739	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACTGTTTATTTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	37469264	37478068	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr1_+_37469364_37470373_37470658_37471631_37471753_37476242_37476383_37476457
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001381	chr1	+	1494	2	FSM	ENSMUSG00000037216.6	ENSMUST00000041621.5	1485	2	-9	0	-9	0	multi-exon	FALSE	canonical	3	65	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCCTTTTCCTTAAGG	NA	False	NA	15	True	ATTAAA	-15	NA	37911277	37915309	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_37911407_37913944
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001389	chr1	-	1217	7	FSM	ENSMUSG00000026088.16	ENSMUST00000027257.10	1231	7	14	0	10	0	multi-exon	FALSE	canonical	3	173	junction_5	18.2543754267908	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGATCCACTCACCTG	NA	False	NA	0	True	AATAAA	-19	NA	37929478	37917968	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_37918445_37918640_37918702_37920013_37920130_37920779_37920867_37921642_37921780_37924295_37924398_37929240
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001398	chr1	+	641	5	FSM	ENSMUSG00000026087.12	ENSMUST00000193673.6	662	5	-5	26	-5	0	multi-exon	FALSE	canonical	3	190	junction_1	367.71796257458	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGCTGATGGAGTCCTG	NA	False	NA	20	True	ATTAAA	-20	NA	37929607	37937419	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_37929666_37933019_37933097_37934410_37934492_37936768_37936916_37937141
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001408	chr1	+	709	6	FSM	ENSMUSG00000026087.12	ENSMUST00000027256.12	969	6	63	197	-3	0	multi-exon	FALSE	canonical	3	545	junction_1	191.904559612324	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGCTGATGGAGTCCTG	NA	False	NA	20	True	ATTAAA	-20	NA	37929620	37937419	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_37929666_37932023_37932105_37933019_37933097_37934410_37934492_37936768_37936916_37937141
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001412	chr1	+	187	1	Intergenic	novelGene_54	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAAATTGATTTCATCA	NA	False	NA	NA	False	NA	NA	NA	37943804	37943991	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_37943800_37944000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001418	chr1	+	179	1	Intergenic	novelGene_55	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAACCTGAATTTT	NA	False	NA	NA	False	NA	NA	NA	37974027	37974206	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_37974000_37974200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001439	chr1	-	2543	4	ISM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	110	3151	19	-697	5prime_fragment	FALSE	canonical	3	765	junction_3	81.3183046224321	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTTATTGATTAATGT	NA	False	NA	NA	False	ATTAAA	-20	NA	38036286	38027420	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr1_-_38029539_38033072_38033192_38034713_38034923_38036189
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001458	chr1	+	214	1	Intergenic	novelGene_56	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAGTCTCAGAGCCATT	6565	False	NA	NA	False	NA	NA	NA	38055818	38056032	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_38055800_38056000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001464	chr1	-	193	1	Intergenic	novelGene_57	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACTCAATGTCGACCTTT	NA	False	NA	NA	False	NA	NA	NA	38062081	38061888	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_38061900_38062100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001473	chr1	-	5029	24	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	10	0	intron_retention	TRUE	canonical	3	30	junction_14	57.1871203128697	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTTTTTTTTTTCTTGTG	NA	False	NA	0	True	AATAAA	-22	NA	38168733	38091866	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38114105_38118370_38118477_38120239_38120440_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001492	chr1	+	186	1	Intergenic	novelGene_58	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAACTTCAAGATAGG	NA	False	NA	NA	False	NA	NA	NA	38192591	38192777	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_38192600_38192800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001496	chr1	+	188	1	Intergenic	novelGene_59	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATAGGACTCTGCCTCGA	NA	False	NA	NA	False	NA	NA	NA	38229858	38230046	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_38229900_38230000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001499	chr1	-	3114	7	FSM	ENSMUSG00000026080.15	ENSMUST00000027249.13	2975	7	-139	0	4	0	multi-exon	FALSE	canonical	2	9	junction_6	2.75378527364305	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTATCTGGGTTTGATTGT	NA	False	NA	NA	False	ATTAAA	-26	NA	38937230	38902947	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_38905117_38907061_38907168_38910681_38910917_38913029_38913122_38923430_38923563_38935017_38935138_38936970
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001503	chr1	-	179	1	Intergenic	novelGene_60	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAGGAAGAAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	38948506	38948327	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_38948300_38948500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001511	chr1	+	1757	6	FSM	ENSMUSG00000026078.11	ENSMUST00000027247.11	3914	6	2158	-1	-75	1	multi-exon	FALSE	canonical	3	825	junction_1	70.5532423067856	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTGTAAGATTTATTT	NA	False	NA	4	True	AATACA	-14	NA	39026846	39036320	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_39026931_39030326_39030457_39033995_39034087_39034325_39034470_39034815_39035025_39035221
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001518	chr1	+	306	1	Intergenic	novelGene_61	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGGAAGGCAGCCAGGC	8017	False	NA	NA	False	NA	NA	NA	39360461	39360767	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_39360500_39360800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001537	chr1	+	500	5	FSM	ENSMUSG00000073702.12	ENSMUST00000178079.8	487	5	-6	-7	-6	5	multi-exon	FALSE	canonical	3	1086	junction_1	4596.75456164455	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTGGTTTTCCTTTCTGT	NA	False	NA	31	True	AATAAA	-20	NA	39407003	39410452	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_39407088_39407229_39407337_39409094_39409221_39410034_39410148_39410382
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001546	chr1	+	500	5	NNC	ENSMUSG00000073702.12	novel	487	5	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	5012.72253246676	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGGTTTGGTTTTCCTT	NA	False	NA	26	True	AATAAA	-15	NA	39407003	39410447	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr1_+_39407093_39407229_39407337_39409094_39409221_39410034_39410148_39410382
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001549	chr1	+	641	4	FSM	ENSMUSG00000073702.12	ENSMUST00000179954.8	630	4	-6	-5	-6	4	multi-exon	FALSE	canonical	3	8615	junction_3	1758.8270712798	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTTGGTTTTCCTTTCTG	NA	False	NA	30	True	AATAAA	-19	NA	39407003	39410451	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_39407337_39409094_39409221_39410034_39410148_39410382
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001567	chr1	+	196	1	Intergenic	novelGene_62	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAACACACACACATATAT	NA	False	NA	NA	False	NA	NA	NA	39468565	39468761	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_39468600_39468800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001572	chr1	+	177	1	Intergenic	novelGene_63	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAAAAGTAATCTC	5333	False	NA	NA	False	NA	NA	NA	39498684	39498861	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_39498700_39498900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001578	chr1	+	167	1	Intergenic	novelGene_64	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAACAAAAACCCAGTAA	6753	False	NA	NA	False	NA	NA	NA	39562231	39562398	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_39562200_39562400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001585	chr1	+	3222	7	FSM	ENSMUSG00000003135.16	ENSMUST00000003219.14	3162	7	-44	-16	-44	0	multi-exon	FALSE	canonical	3	674	junction_2	52.6289421854131	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAGAGTTTATATTATTT	NA	False	NA	NA	False	NA	NA	NA	39574838	39585970	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_39575419_39576496_39576662_39577351_39577505_39578953_39579157_39581480_39581684_39583972_39584070_39584149
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001598	chr1	-	1268	1	FSM	ENSMUSG00000077704.3	ENSMUST00000104516.3	110	1	3	-1161	3	1161	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGTGGTTATTCAGT	NA	False	NA	-13	True	AATAAA	-8	NA	39587932	39586664	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_39586700_39587900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001618	chr1	+	190	1	Intergenic	novelGene_65	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTTGATTCACAACAGT	9348	False	NA	NA	False	NA	NA	NA	39861803	39861993	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_39861800_39862000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001630	chr1	+	202	1	Intergenic	novelGene_66	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAATATCAGACAGCCCA	4061	False	NA	NA	False	NA	NA	NA	40014115	40014317	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_40014100_40014300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001634	chr1	-	3178	6	FSM	ENSMUSG00000041945.13	ENSMUST00000039672.6	3160	6	-14	-4	10	4	multi-exon	FALSE	canonical	3	9	junction_2	1.46969384566991	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTCGTGTTCTT	NA	False	NA	NA	False	ATTAAA	-18	NA	40829837	40811193	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_40813707_40820540_40820751_40823536_40823667_40825326_40825371_40826689_40826778_40829644
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001638	chr1	+	191	1	Intergenic	novelGene_67	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGAGATGGTAG	NA	False	NA	NA	False	NA	NA	NA	42552574	42552765	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_42552600_42552800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001653	chr1	+	1395	11	FSM	ENSMUSG00000060679.15	ENSMUST00000057208.13	1418	11	27	-4	-16	3	multi-exon	FALSE	canonical	3	624	junction_3	42.3685024517034	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTTTTTTTTAAACCTT	NA	False	NA	18	True	AATAAA	-20	NA	42890419	42944846	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42934509_42934578_42935252_42935329_42937599_42937769_42938600_42938710_42942454_42942625_42944564
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001675	chr1	+	3445	4	FSM	ENSMUSG00000010290.8	ENSMUST00000010434.8	3458	4	18	-5	18	5	multi-exon	FALSE	canonical	3	151	junction_3	24.6080384337223	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGCCTGTCATTTGCAAT	NA	False	NA	NA	False	AATAAA	-20	NA	43137887	43155112	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_43138023_43139874_43140042_43150157_43150534_43152345
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001683	chr1	+	230	1	Intergenic	novelGene_68	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAGCTGAGCAAGCCAGA	NA	False	NA	NA	False	NA	NA	NA	43160577	43160807	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_43160600_43160800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001686	chr1	+	722	1	FSM	ENSMUSG00000094497.2	ENSMUST00000178557.2	483	1	-104	-135	-104	135	mono-exon	FALSE	NA	NA	NA	NA	NA	456	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGAGGCAGATGTGTTA	NA	False	NA	NA	False	AATAAA	-35	NA	43228211	43228933	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_43228200_43228900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001697	chr1	+	2798	5	FSM	ENSMUSG00000066877.12	ENSMUST00000086421.9	2772	5	-23	-3	-23	3	multi-exon	FALSE	canonical	3	156	junction_4	15.4757875405422	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTGTGTTTGTGTTTTG	NA	False	NA	14	True	AATAAA	-18	NA	43484887	43609678	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_43485188_43548780_43548944_43572711_43572954_43593020_43593743_43608307
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001723	chr1	-	185	1	Intergenic	novelGene_69	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTATGTGGGTTCATGTT	2801	False	NA	NA	False	NA	NA	NA	43931074	43930889	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_43930900_43931100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001746	chr1	+	204	1	Intergenic	novelGene_70	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTTGTATCTAATTTT	NA	False	NA	NA	False	NA	NA	NA	44093470	44093674	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_44093500_44093700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001750	chr1	+	184	1	Intergenic	novelGene_71	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATAACTAAAATTGATCT	4707	False	NA	NA	False	NA	NA	NA	44124802	44124986	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_44124800_44125000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001752	chr1	-	1258	7	NIC	ENSMUSG00000026049.12	novel	1272	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	144	junction_6	127.50348579113	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTTTGTTTTACTCT	NA	False	NA	0	True	ATTAAA	-20	NA	44141593	44125772	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44141059_44141118_44141487
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001759	chr1	-	1189	6	FSM	ENSMUSG00000026049.12	ENSMUST00000150911.8	960	6	19	-248	1	0	multi-exon	FALSE	canonical	3	213	junction_5	82.045353311446	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTTTGTTTTACTCT	NA	False	NA	0	True	ATTAAA	-20	NA	44141582	44125772	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44141487
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001776	chr1	-	2018	10	FSM	ENSMUSG00000026047.14	ENSMUST00000065767.9	2359	10	2	339	2	0	multi-exon	FALSE	canonical	3	275	junction_6	34.7545183135931	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGTTTTGTTACAGTT	NA	False	NA	-5	True	AATAAA	-17	NA	44157966	44146044	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152043_44152162_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157477
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001778	chr1	-	2097	9	FSM	ENSMUSG00000026047.14	ENSMUST00000141125.8	2085	9	-12	0	0	0	multi-exon	FALSE	canonical	3	275	junction_5	36.3145976158349	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGTTTTGTTACAGTT	NA	False	NA	-5	True	AATAAA	-17	NA	44157925	44146044	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157477
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001796	chr1	+	144	1	NIC	ENSMUSG00000100894.2	novel	584	2	NA	NA	287	-297	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCTGAATTTTTGCTGC	NA	False	NA	NA	False	NA	NA	NA	45641472	45641616	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_+_45641500_45641600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001803	chr1	-	206	1	Intergenic	novelGene_72	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGAAAAGACCATGAATTT	NA	False	NA	NA	False	NA	NA	NA	45708325	45708119	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_45708100_45708300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001810	chr1	+	2983	21	FSM	ENSMUSG00000025995.17	ENSMUST00000027139.15	2953	21	-1	-29	-1	29	multi-exon	FALSE	canonical	3	530	junction_5	51.2145243070752	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTTGCTAAGTACCT	NA	False	NA	37	True	ATTAAA	-23	NA	45834324	45862808	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45841290_45843036_45843162_45844536_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001817	chr1	+	142	1	Intergenic	novelGene_73	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTCATCTGGTTACCAA	NA	False	NA	NA	False	AATAAA	-28	NA	45846295	45846437	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_45846300_45846400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001822	chr1	+	219	1	Intergenic	novelGene_74	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATACAATCAGGTTACCT	NA	False	NA	NA	False	NA	NA	NA	46825079	46825298	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_46825100_46825300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001850	chr1	+	200	1	Intergenic	novelGene_75	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCATGAAATGCTGCTTTT	NA	False	NA	NA	False	NA	NA	NA	46922012	46922212	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_46922000_46922200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001858	chr1	-	2838	6	FSM	ENSMUSG00000026107.12	ENSMUST00000027279.12	2838	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	8.25590697622012	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATAGGAGTAACAGAACT	NA	False	NA	-1	True	AATAAA	-32	NA	51517558	51508646	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_51510571_51511487_51511540_51512164_51512241_51513692_51513765_51516636_51516776_51516983
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001882	chr1	+	2593	24	FSM	ENSMUSG00000062939.12	ENSMUST00000027277.7	2982	24	392	-3	9	-1	multi-exon	TRUE	canonical	3	8	junction_15	7.16402480577569	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTTTCTGGTTTTATT	NA	False	NA	NA	False	AATATA	-21	NA	52047793	52146346	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_52047888_52050941_52051071_52052948_52053094_52104473_52104573_52107904_52107998_52111019_52111099_52113835_52113922_52115691_52115844_52117652_52117812_52118899_52118993_52121676_52121737_52122020_52122039_52122136_52122231_52123237_52123283_52135943_52136028_52137545_52137645_52139482_52139619_52141010_52141061_52141275_52141371_52141639_52141777_52142006_52142199_52144364_52144432_52144826_52144936_52146068
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001896	chr1	-	4413	15	FSM	ENSMUSG00000026103.15	ENSMUST00000114510.8	5596	15	8	1175	-1	1	multi-exon	FALSE	canonical	3	106	junction_8	52.7471829211992	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGTTTTTTTTAATAT	NA	False	NA	1	True	AATAAA	-17	NA	52272383	52224437	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001908	chr1	-	4471	15	NIC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	64.5226190366366	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGTTTTTTTTAATA	NA	False	NA	0	True	AATAAA	-16	NA	52272383	52224438	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_-_52227013_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001935	chr1	+	201	1	Intergenic	novelGene_76	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACAAGCCATCACTGCTG	NA	False	NA	NA	False	NA	NA	NA	52730565	52730766	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_52730600_52730800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001939	chr1	+	1717	14	FSM	ENSMUSG00000041426.13	ENSMUST00000044478.7	1830	14	-11	124	-9	-119	multi-exon	FALSE	canonical	3	80	junction_5	8.39836557781919	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGTGTGTTGATGCCTTA	NA	False	NA	7	True	AATAAA	-17	NA	52884193	52960021	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_52884304_52892826_52892870_52899186_52899325_52901426_52901512_52904707_52904789_52908064_52908118_52924261_52924341_52940346_52940493_52942005_52942093_52943800_52943860_52944529_52944612_52952889_52953010_52955795_52955830_52959421
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001961	chr1	-	3051	13	FSM	ENSMUSG00000026098.14	ENSMUST00000027267.14	3054	13	3	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	15.4495145554804	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTCACGTCCAACC	6055	False	NA	NA	False	AATAAA	-18	NA	53336174	53228345	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53336044
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001971	chr1	+	1855	4	FSM	ENSMUSG00000026097.10	ENSMUST00000027266.4	1910	4	-9	64	-9	-64	multi-exon	FALSE	canonical	3	184	junction_2	12.7104506432917	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGTTTTCCAAGACAG	NA	False	NA	29	True	AATAAA	-23	NA	53336244	53349404	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_53336348_53338130_53338312_53344613_53344766_53347985
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001986	chr1	+	1657	8	FSM	ENSMUSG00000026096.15	ENSMUST00000027265.10	1868	8	29	182	-1	-6	multi-exon	FALSE	canonical	3	122	junction_2	14.7537611946159	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTCAAGAATCATTTCGT	NA	False	NA	5	True	AATAAA	-25	NA	53352811	53365320	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_53353018_53354014_53354259_53357060_53357449_53359101_53359456_53360238_53360370_53360654_53360727_53362325_53362430_53365162
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000001989	chr1	-	2403	6	FSM	ENSMUSG00000026095.16	ENSMUST00000027264.10	2442	6	41	-2	41	2	multi-exon	FALSE	canonical	3	502	junction_1	45.94344349306	296	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTAATTTTTACCTTT	NA	False	NA	0	True	AATAAA	-43	NA	53391870	53383773	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_53384139_53385738_53385921_53386173_53387718_53389145_53389222_53390038_53390093_53391688
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002011	chr1	+	182	1	Intergenic	novelGene_77	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCCTGGAGAGCCTGTA	9098	False	NA	NA	False	NA	NA	NA	54259926	54260108	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_54259900_54260100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002016	chr1	-	4620	18	FSM	ENSMUSG00000041303.8	ENSMUST00000041638.8	4582	18	-38	0	-38	0	multi-exon	FALSE	canonical	3	130	junction_11	22.8358062796764	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCACCTTTTAAACTTT	6662	False	NA	-6	True	AATAAA	-19	NA	54478168	54435162	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_54437162_54438287_54438441_54442669_54442795_54444138_54444330_54444995_54445234_54455042_54455179_54455880_54455983_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920_54468113_54469657_54469782_54473212_54473398_54476990_54477103_54477971
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002026	chr1	-	239	1	Intergenic	novelGene_78	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGGCAAGAAAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	54926537	54926298	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_54926300_54926500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002038	chr1	+	206	1	Intergenic	novelGene_79	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATAAGTACACTGTAGTT	NA	False	NA	NA	False	NA	NA	NA	54987090	54987296	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_54987100_54987300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002049	chr1	-	6220	25	FSM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	-24	-1	-24	1	multi-exon	TRUE	canonical	2	1032	junction_2	157.733865172392	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGTATACCAGTTCTTA	NA	False	NA	-8	True	AATAAA	-18	NA	55066664	55024326	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002060	chr1	-	6152	24	NIC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	2	-1850	intron_retention	FALSE	canonical	2	1032	junction_2	150.157661314426	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTGTTTTTTGAAT	NA	False	NA	0	True	AATAAA	-22	NA	55066638	55026181	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55055650_55055937_55056043_55058392_55058560_55066497
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002082	chr1	+	1684	5	FSM	ENSMUSG00000025981.14	ENSMUST00000027125.7	1733	5	49	0	49	0	multi-exon	FALSE	canonical	3	135	junction_4	22.7486263321547	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGTTATTTAAATCTTT	3608	False	NA	22	True	AATAAA	-28	NA	55091977	55111861	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_55092150_55100433_55100584_55103339_55103533_55106655_55106758_55110794
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002091	chr1	-	2363	12	FSM	ENSMUSG00000025980.15	ENSMUST00000027123.15	2423	12	64	-4	64	4	multi-exon	FALSE	canonical	2	4506	junction_7	645.86437693097	4465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTACCCTTTCCATG	4519	False	NA	-2	True	AATAAA	-20	NA	55127119	55116989	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002098	chr1	-	2434	12	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	2	335	junction_11	1793.34097000842	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGTGTTACCCTTTCCA	4236	False	NA	-4	True	AATAAA	-18	NA	55127402	55116991	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55127147
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002137	chr1	+	194	1	Intergenic	novelGene_80	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAGCCAGTAA	NA	False	NA	NA	False	NA	NA	NA	55144250	55144444	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_55144200_55144400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002151	chr1	+	184	1	Intergenic	novelGene_81	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAAAAACAGGACTGTAT	8751	False	NA	NA	False	NA	NA	NA	55245974	55246158	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_55246000_55246200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002157	chr1	+	2861	1	FSM	ENSMUSG00000046994.10	ENSMUST00000061334.10	11294	1	21	8412	21	-8412	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTTTGGTTACACTCA	NA	False	NA	25	True	ATTAAA	-25	NA	55276356	55279217	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_55276400_55279200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002183	chr1	-	1189	8	FSM	ENSMUSG00000048495.17	ENSMUST00000079998.13	1398	8	203	6	0	-6	multi-exon	FALSE	canonical	3	102	junction_6	15.7025930524684	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAAGTCTATTGGTGGAG	NA	False	NA	-24	True	AATAAA	-37	NA	57445630	57427404	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_57427912_57429800_57429918_57430607_57430696_57432508_57432647_57433205_57433251_57435885_57435956_57440546_57440683_57445542
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002192	chr1	+	1087	5	FSM	ENSMUSG00000025971.7	ENSMUST00000027114.6	3540	5	407	2046	-24	-2046	multi-exon	FALSE	canonical	3	301	junction_4	18.5926732881531	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTAGTGTTCTTTAAAGG	NA	False	NA	12	True	AATAAA	-15	NA	57445893	57455066	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_57446382_57449070_57449143_57450881_57451009_57452398_57452547_57454814
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002207	chr1	+	149	1	Intergenic	novelGene_82	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCGCAAAATTTTTTAAACT	NA	False	NA	NA	False	NA	NA	NA	57993365	57993514	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_57993400_57993500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002215	chr1	-	2436	7	FSM	ENSMUSG00000054770.17	ENSMUST00000114410.10	2512	7	71	5	-5	0	multi-exon	FALSE	canonical	3	34	junction_6	14.3372087784044	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTTTTCTGTGACTAC	NA	False	NA	-4	True	AATAAA	-20	NA	58009216	57994411	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004487_58004700_58006655_58006883_58009179
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002242	chr1	-	215	1	Intergenic	novelGene_83	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAATCCAGTGGTATTCTT	NA	False	NA	NA	False	NA	NA	NA	58189416	58189201	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_58189200_58189400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002256	chr1	+	3676	12	FSM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	202	-2	-24	2	multi-exon	FALSE	canonical	3	1694	junction_11	87.7965341283964	598	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGTGTCTGTGCTTTAT	859	False	NA	15	True	NA	NA	NA	58432258	58446514	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002280	chr1	-	1802	13	FSM	ENSMUSG00000026034.18	ENSMUST00000034868.14	1796	13	-6	0	-6	0	multi-exon	FALSE	canonical	3	45	junction_9	59.1577458063514	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTCTATAGCTTGGTG	NA	False	NA	-12	True	AATAAA	-20	NA	58463231	58451158	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456171_58456339_58456425_58456543_58458825_58458893_58459279_58459371_58460241_58460468_58460932_58461094_58463078
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002292	chr1	+	183	1	Intergenic	novelGene_84	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCATCCTTGAATCTTC	NA	False	NA	NA	False	NA	NA	NA	58474565	58474748	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_58474600_58474700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002304	chr1	+	199	1	Intergenic	novelGene_85	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGACTGGGCTGGGTGT	NA	False	NA	NA	False	NA	NA	NA	58495681	58495880	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_58495700_58495900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002327	chr1	+	210	1	Intergenic	novelGene_86	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGACTGCACTTCCA	5266	False	NA	NA	False	NA	NA	NA	58510414	58510624	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_58510400_58510600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002336	chr1	-	179	1	Intergenic	novelGene_87	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGGAGAACTT	NA	False	NA	NA	False	NA	NA	NA	58516171	58515992	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_58516000_58516200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002341	chr1	-	201	1	Intergenic	novelGene_88	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACAGTATTCACTTAGTA	NA	False	NA	NA	False	NA	NA	NA	58540415	58540214	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_58540200_58540400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002346	chr1	+	545	3	FSM	ENSMUSG00000026032.9	ENSMUST00000027193.9	763	3	218	0	218	0	multi-exon	FALSE	canonical	3	979	junction_1	90.5	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTCCCTCTAACCTCA	NA	False	NA	52	True	AATAAA	-20	NA	58625760	58635123	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_58625830_58630248_58630409_58634807
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002352	chr1	+	1739	1	FSM	ENSMUSG00000059647.6	ENSMUST00000081455.6	552	1	-93	-1094	-93	1094	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGAGACGCAGTCCTGGT	NA	False	NA	NA	False	AATAAA	-33	NA	58685753	58687492	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_58685800_58687500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002363	chr1	+	222	1	FSM	ENSMUSG00000102719.2	ENSMUST00000194726.2	3841	1	3096	523	3096	-523	mono-exon	FALSE	NA	NA	NA	NA	NA	238	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTATCTCTTTGGAATTT	8429	False	NA	NA	False	NA	NA	NA	58840037	58840259	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_58840000_58840300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002370	chr1	-	6191	16	FSM	ENSMUSG00000026028.13	ENSMUST00000027186.12	6189	16	-3	1	-3	-1	multi-exon	FALSE	canonical	3	42	junction_7	7.62335592475883	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTCCTTGTGATTT	1544	False	NA	-1	True	AATAAA	-40	NA	59012592	58939608	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_58943342_58945864_58945971_58947681_58947949_58949108_58949408_58950794_58950996_58951344_58951422_58954844_58954983_58957930_58958006_58958379_58958511_58960232_58960312_58960838_58961049_58962680_58962798_58965809_58965887_58974904_58975100_58985405_58985695_59012395
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002409	chr1	+	4865	1	FSM	ENSMUSG00000041075.9	ENSMUST00000114246.4	4532	1	-333	0	-333	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTGAATGTTTATTTAC	5021	False	NA	NA	False	AATAAA	-15	NA	59521249	59526114	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_59521200_59526100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002419	chr1	-	200	1	Intergenic	novelGene_89	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCGTGGTAGTGAATG	NA	False	NA	NA	False	NA	NA	NA	59626355	59626155	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_59626200_59626400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002430	chr1	+	189	1	Intergenic	novelGene_90	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGACTTGTCGGGCCTGGT	NA	False	NA	NA	False	TTTAAA	-2	NA	59663589	59663778	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_59663600_59663800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002439	chr1	-	1213	5	FSM	ENSMUSG00000026021.16	ENSMUST00000091374.9	1215	5	2	0	2	0	multi-exon	FALSE	canonical	3	3231	junction_1	432.6531520745	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGCTCCTTTTATTTTA	591	False	NA	0	True	AATAAA	-21	NA	59709991	59678592	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_59679428_59681576_59681649_59683675_59683754_59694616_59694692_59709838
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002448	chr1	-	1266	6	NNC	ENSMUSG00000026021.16	novel	1215	5	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_4	1439.42688595149	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGAAGCTCCTTTTATT	632	False	NA	-3	True	AATAAA	-18	NA	59709950	59678595	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr1_-_59679428_59681576_59681649_59683675_59683754_59691930_59692028_59694616_59694692_59709838
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002461	chr1	+	208	1	Intergenic	novelGene_91	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	276	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATCAAACCTCTCTTTCC	-7	True	NA	NA	False	NA	NA	NA	59698060	59698268	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_59698100_59698300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002467	chr1	+	2066	15	FSM	ENSMUSG00000026020.10	ENSMUST00000191142.7	9507	15	-89	7530	-51	4	multi-exon	FALSE	canonical	3	1434	junction_3	210.570471503931	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTGATCTCTTTATAT	NA	False	NA	NA	False	AATAAA	-25	NA	59724078	59750673	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002494	chr1	+	2160	16	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	614.893580675189	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTTTTGTGATCTCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	59724157	59750669	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59731710_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002500	chr1	+	177	1	ISM	ENSMUSG00000026020.10	ENSMUST00000186044.2	725	2	5567	240	394	-240	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTAATGTAAGTAA	NA	False	NA	NA	False	NA	NA	NA	59729731	59729908	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr1_+_59729700_59729900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002507	chr1	-	210	1	Intergenic	novelGene_92	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGGGCAGTCTATAGCCT	NA	False	NA	NA	False	NA	NA	NA	59734668	59734458	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_59734500_59734700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002514	chr1	+	197	1	Intergenic	novelGene_93	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGAAAGTGAAGAAGAGTT	NA	False	NA	NA	False	NA	NA	NA	59776517	59776714	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_59776500_59776700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002520	chr1	+	223	1	Intergenic	novelGene_94	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCATACGTGGTGGCAC	NA	False	NA	NA	False	NA	NA	NA	59794998	59795221	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_59795000_59795200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002535	chr1	-	205	1	Intergenic	novelGene_95	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTGAATTTTTAAGAAAAT	NA	False	NA	NA	False	TATAAA	-8	NA	59881453	59881248	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_59881200_59881500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002571	chr1	-	1526	14	FSM	ENSMUSG00000026019.16	ENSMUST00000117438.8	3251	14	451	1274	-48	-1274	multi-exon	FALSE	canonical	3	160	junction_13	218.809771208535	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTGTTGGGTCTTGTCT	NA	False	NA	-21	True	AATGAA	-16	NA	60137353	60117300	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137301
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002578	chr1	+	178	1	Intergenic	novelGene_96	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAGTAATACTTAA	NA	False	NA	9	True	NA	NA	NA	60140050	60140228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_60140000_60140200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002582	chr1	+	200	1	Intergenic	novelGene_97	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTGTGGCCTTATTGAAA	NA	False	NA	NA	False	NA	NA	NA	60200121	60200321	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_60200100_60200300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002601	chr1	-	187	1	Intergenic	novelGene_98	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGGATGAAAGCGGCCC	NA	False	NA	NA	False	AATAAA	-7	NA	60399627	60399440	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_60399400_60399600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002620	chr1	+	1808	1	FSM	ENSMUSG00000101188.2	ENSMUST00000122226.2	1218	1	-17	-573	-17	573	mono-exon	FALSE	NA	NA	NA	NA	NA	619	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAAGTGCTTAGATGGCT	NA	False	NA	124	True	AATAAA	-45	NA	60743073	60744881	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_60743100_60744900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002630	chr1	+	197	1	Intergenic	novelGene_99	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGGTGGCATATGTACA	NA	False	NA	NA	False	NA	NA	NA	62462626	62462823	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_62462600_62462800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002634	chr1	+	378	1	Intergenic	novelGene_100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATAAAGCCACTCTTTG	NA	False	NA	NA	False	NA	NA	NA	63085201	63085579	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_63085200_63085600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002641	chr1	-	2760	20	NIC	ENSMUSG00000025968.17	novel	2661	19	NA	NA	11	6	combination_of_known_junctions	FALSE	canonical	3	163	junction_19	199.298478811329	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGTGTGAAGTTTTTTT	NA	False	NA	NA	False	AATAAA	-37	NA	63215970	63182748	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63215744
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002651	chr1	-	2656	19	FSM	ENSMUSG00000025968.17	ENSMUST00000027111.15	2661	19	11	-6	11	6	multi-exon	FALSE	canonical	3	367	junction_18	130.918608680223	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGTGTGAAGTTTTTTT	NA	False	NA	NA	False	AATAAA	-37	NA	63215970	63182748	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215744
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002663	chr1	-	2700	19	FSM	ENSMUSG00000025968.17	ENSMUST00000168099.9	2590	19	33	-143	-9	4	multi-exon	FALSE	canonical	3	212	junction_18	163.056757519704	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAAGTGTGAAGTTTTT	NA	False	NA	NA	False	AATAAA	-35	NA	63215858	63182750	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215586
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002682	chr1	-	181	1	Intergenic	novelGene_101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAACTGGACTATAAAAT	NA	False	NA	NA	False	NA	NA	NA	63188465	63188284	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_63188300_63188500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002686	chr1	+	1100	6	FSM	ENSMUSG00000025967.17	ENSMUST00000129339.8	1939	6	9	830	9	0	multi-exon	FALSE	canonical	3	2982	junction_1	199.182730175083	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGCTCTTCATTTTGC	NA	False	NA	30	True	AATAAA	-15	NA	63215992	63218815	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_63216451_63216912_63217036_63217597_63217725_63217990_63218058_63218406_63218533_63218616
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002692	chr1	-	207	1	Intergenic	novelGene_102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAATGTTTAGATATCAAA	NA	False	NA	NA	False	AGTAAA	-8	NA	63219903	63219696	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_63219700_63219900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002703	chr1	+	231	1	Intergenic	novelGene_103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCCTAAAATAAATTAAAGC	24	False	NA	NA	False	AAAAAG	-31	NA	63273240	63273471	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_63273200_63273500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002720	chr1	+	2297	12	FSM	ENSMUSG00000025962.16	ENSMUST00000027103.7	4486	12	8	2181	8	9	multi-exon	FALSE	canonical	3	308	junction_4	54.5943720043143	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTGGCTGATCACTGCA	NA	False	NA	14	True	AATAAA	-25	NA	63769780	63791633	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_63769851_63770558_63771381_63773890_63773995_63774621_63774731_63775003_63775128_63776937_63777078_63778340_63778514_63785000_63785165_63787116_63787330_63788844_63788930_63790422_63790538_63791455
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002745	chr1	+	3475	10	FSM	ENSMUSG00000070871.11	ENSMUST00000094898.5	2923	10	-546	-6	-23	2	multi-exon	FALSE	canonical	3	63	junction_5	18.3632752128592	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGAGTGTGTTTGTACTA	NA	False	NA	NA	False	AATAAA	-20	NA	64729957	64764805	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_64730560_64740127_64740203_64741504_64741540_64747536_64747638_64750576_64750613_64752269_64752322_64753727_64753848_64757289_64757457_64760785_64760949_64762681
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002756	chr1	-	6915	2	FSM	ENSMUSG00000045005.10	ENSMUST00000063982.7	6915	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGGCGTTGAGTCTTTCT	NA	False	NA	NA	False	ATTAAA	-22	NA	64776910	64769716	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_64776013_64776291
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002781	chr1	-	179	1	Intergenic	novelGene_104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAACAAACAAACACCATTT	NA	False	NA	NA	False	NA	NA	NA	65143326	65143147	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_65143100_65143300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002786	chr1	-	2268	9	FSM	ENSMUSG00000025950.17	ENSMUST00000097709.11	2302	9	39	-5	39	5	multi-exon	FALSE	canonical	3	773	junction_5	91.7393556495793	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATGTGTTTTTATTTAA	NA	False	NA	-1	True	ATTAAA	-33	NA	65218301	65197769	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65218148
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002797	chr1	-	2346	10	NIC	ENSMUSG00000025950.17	novel	2283	9	NA	NA	4	-4	combination_of_known_junctions	FALSE	canonical	3	34	junction_9	367.996712277316	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGTGTTTATTATGTG	NA	False	NA	-12	True	ATTAAA	-22	NA	65225634	65197780	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65220786_65220858_65225463
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002822	chr1	+	2427	6	FSM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	-24	289	-24	-289	multi-exon	FALSE	canonical	3	708	junction_1	56.5840967056999	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGTAAGTATTGAATTTA	NA	False	NA	21	True	NA	NA	NA	66739965	66758675	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002853	chr1	-	1405	10	NIC	ENSMUSG00000026000.17	novel	1385	10	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_9	146.548774167089	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCGAGTTTTTATTTCC	NA	False	NA	-5	True	AATGAA	-16	NA	67078043	67042533	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653_67077751_67077960
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002867	chr1	+	2283	13	ISM	ENSMUSG00000025991.9	ENSMUST00000027144.8	5555	38	81478	-4	81478	4	3prime_fragment	FALSE	canonical	0	0	junction_2	3.27448045073142	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTTGAATTCTTTTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	67243662	67270422	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr1_+_67243862_67244290_67244359_67245914_67245991_67248754_67248833_67251561_67251670_67253175_67253266_67254568_67254740_67257010_67257086_67259661_67259761_67266282_67266343_67267394_67267508_67268547_67268678_67269406
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002873	chr1	+	189	1	Intergenic	novelGene_105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCCAAAAGAAAACTACTTT	NA	False	NA	NA	False	NA	NA	NA	70500455	70500644	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_70500500_70500600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002893	chr1	+	192	1	Intergenic	novelGene_106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTTGATGCATATGTTC	5691	False	NA	NA	False	NA	NA	NA	71621200	71621392	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_71621200_71621400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002907	chr1	-	10519	44	NIC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	0	1	intron_retention	TRUE	canonical	3	1514	junction_35	376.877721094857	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGACGTCATTTCTTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	71692331	71624677	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002908	chr1	-	8047	45	NIC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	0	1	intron_retention	FALSE	canonical	3	134	junction_13	462.096137608357	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGACGTCATTTCTTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	71692331	71624677	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002912	chr1	-	7774	44	FSM	ENSMUSG00000026193.16	ENSMUST00000186129.7	7797	44	28	-5	0	1	multi-exon	FALSE	canonical	3	134	junction_13	520.876343765833	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGACGTCATTTCTTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	71692331	71624677	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002914	chr1	-	8044	45	FSM	ENSMUSG00000026193.16	ENSMUST00000188894.7	8043	45	0	-1	0	1	multi-exon	FALSE	canonical	3	355	junction_21	441.858289425336	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGACGTCATTTCTTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	71692331	71624677	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002933	chr1	-	8239	46	NIC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	0	1	intron_retention	FALSE	canonical	3	235	junction_7	446.060812994023	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACGTCATTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	71692331	71624680	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636832_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002967	chr1	+	204	1	Intergenic	novelGene_107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATTTATTTATTTATG	NA	False	NA	NA	False	TTTAAA	-4	NA	72278482	72278686	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_72278500_72278700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002977	chr1	-	1205	8	FSM	ENSMUSG00000026189.14	ENSMUST00000027381.13	1186	8	-19	0	-19	0	multi-exon	FALSE	canonical	1	70	junction_5	66.3254191429636	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTTATCTTTTAAGGATT	NA	False	NA	-6	True	AATAAA	-19	NA	72323492	72298330	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_72298593_72301110_72301223_72306565_72306677_72309435_72309533_72314044_72314127_72315324_72315491_72316445_72316580_72323251
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002985	chr1	+	2556	21	FSM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	-6	-1	-6	1	multi-exon	FALSE	canonical	3	464	junction_5	74.8852455427636	290	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGAAGTCTCAT	316	False	NA	23	True	TATAAA	-29	NA	72346579	72434112	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_72346727_72349593_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374_72365514_72369084_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72393496_72395975_72396046_72420777_72420888_72422516_72422614_72422860_72422929_72433054_72433127_72433866
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000002995	chr1	+	3069	17	FSM	ENSMUSG00000039354.17	ENSMUST00000047615.15	3059	17	-10	0	-10	0	multi-exon	FALSE	canonical	3	73	junction_6	11.1563813017483	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTATTCCGTTTGTCAC	NA	False	NA	9	True	AATAAA	-16	NA	72622399	72672293	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_72622598_72624796_72625564_72626209_72626261_72630221_72630435_72630983_72631035_72634946_72635134_72636537_72636689_72637929_72638089_72640527_72640594_72650453_72650595_72651967_72652184_72655666_72655738_72659190_72659294_72665621_72665805_72667259_72667361_72668533_72668631_72671979
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003004	chr1	+	172	1	Intergenic	novelGene_108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTTTAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	72676135	72676307	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_72676100_72676300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003007	chr1	+	203	1	Intergenic	novelGene_109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGTGCGGTCCCCAGTA	NA	False	NA	NA	False	NA	NA	NA	72743457	72743660	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_72743500_72743700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003019	chr1	+	712	3	FSM	ENSMUSG00000046330.11	ENSMUST00000212432.2	665	3	-24	-23	0	2	multi-exon	FALSE	canonical	2	15690	junction_1	1470.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTTTGCCTTGT	NA	False	NA	0	True	AATAAA	-17	NA	72750448	72752778	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_72750960_72751300_72751384_72752660
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003042	chr1	-	6291	33	FSM	ENSMUSG00000055322.17	ENSMUST00000191104.7	9904	33	-66	3679	-66	0	multi-exon	FALSE	canonical	3	25	junction_32	13.8921276605673	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGTCCCTTGTGATA	NA	False	NA	-4	True	NA	NA	NA	74163674	73953069	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73976383_73976477_73980136_73980213_73981068_73981266_73991579_73993110_74020072_74020190_74021391_74021458_74024177_74024308_74024861_74024938_74025033_74025095_74025421_74025535_74029469_74029554_74030833_74030899_74031258_74031382_74032321_74032373_74034359_74034541_74036207_74036264_74041445_74041497_74042675_74042718_74055303_74055346_74107767_74107806_74118357_74118473_74163450
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003060	chr1	+	1651	10	FSM	ENSMUSG00000006304.15	ENSMUST00000006467.14	1404	10	-20	-227	0	5	multi-exon	TRUE	canonical	3	1867	junction_3	197.32307280632	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGTTGATTTTTCTCG	7828	False	NA	19	True	AATAAA	-24	NA	74275655	74307373	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003069	chr1	+	359	1	Intergenic	novelGene_110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAGAAAAGTAGA	1127	False	NA	NA	False	NA	NA	NA	74282353	74282712	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_74282400_74282700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003071	chr1	+	216	1	Intergenic	novelGene_111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTGGGCTAAATGTAGA	929	False	NA	NA	False	NA	NA	NA	74296928	74297144	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_74296900_74297100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003077	chr1	-	1795	11	FSM	ENSMUSG00000006299.14	ENSMUST00000178235.8	1756	11	-33	-6	25	0	multi-exon	FALSE	canonical	3	93	junction_10	361.877106211487	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTGTGCATTTTGTG	NA	False	NA	1	True	AATAAA	-19	NA	74323872	74318998	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323204_74323661
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003078	chr1	-	1823	11	FSM	ENSMUSG00000006299.14	ENSMUST00000006462.14	1817	11	-6	0	-6	0	multi-exon	FALSE	canonical	3	1233	junction_8	50.6802722960325	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTGTGCATTTTGTG	NA	False	NA	1	True	AATAAA	-19	NA	74323903	74318998	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323201_74323661
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003098	chr1	+	625	3	FSM	ENSMUSG00000026179.15	ENSMUST00000113805.8	740	3	115	0	0	0	multi-exon	FALSE	canonical	3	1381	junction_1	89	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCCAGGTTGAATTTGT	NA	False	NA	6	True	AATAAA	-24	NA	74324203	74326613	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_74324297_74325000_74325170_74326250
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003108	chr1	+	2934	10	FSM	ENSMUSG00000026179.15	ENSMUST00000027370.13	2937	10	5	-2	0	0	multi-exon	FALSE	canonical	3	54	junction_2	408.826988068106	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGTCTGAGCTCTCAAT	NA	False	NA	5	True	NA	NA	NA	74324208	74392845	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_74324297_74325000_74325170_74386543_74386660_74386810_74386924_74387921_74387981_74388466_74388560_74388872_74389037_74389775_74389863_74390695_74390812_74390916
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003129	chr1	+	2850	9	FSM	ENSMUSG00000026179.15	ENSMUST00000087225.6	2859	9	13	-4	13	4	multi-exon	FALSE	canonical	3	63	junction_1	11.428445869846	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGAGCTCTCAATGGCT	9376	False	NA	9	True	NA	NA	NA	74371781	74392849	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_74371951_74386543_74386660_74386810_74386924_74387921_74387981_74388466_74388560_74388872_74389037_74389775_74389863_74390695_74390812_74390916
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003134	chr1	+	191	1	Intergenic	novelGene_112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAATTAAATCAAACTTAAA	3271	False	NA	NA	False	NA	NA	NA	74396545	74396736	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_74396500_74396700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003141	chr1	+	190	1	Intergenic	novelGene_113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAATGAAGAGGGA	NA	False	NA	NA	False	NA	NA	NA	74447258	74447448	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_74447300_74447400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003174	chr1	+	3276	8	FSM	ENSMUSG00000026174.10	ENSMUST00000087215.7	3268	8	-4	-4	-4	4	multi-exon	FALSE	canonical	3	963	junction_5	46.4318680148337	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTTTTTAAATTCTT	856	False	NA	42	True	AATAAA	-27	NA	74545212	74570005	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_74545621_74556228_74556409_74558059_74558176_74561476_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003184	chr1	+	186	1	Intergenic	novelGene_114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGAGAAGGAACCTGA	NA	False	NA	NA	False	NA	NA	NA	74571777	74571963	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_74571800_74572000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003205	chr1	-	1449	10	FSM	ENSMUSG00000026171.13	ENSMUST00000113721.8	1451	10	3	-1	-2	1	multi-exon	FALSE	canonical	3	22	junction_3	27.6463557752974	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCCTATGTGGTATGAC	NA	False	NA	NA	False	AATAAA	-26	NA	74640533	74632910	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_74633562_74633718_74633854_74634367_74634458_74634789_74634928_74635024_74635097_74637520_74637591_74637688_74637757_74637851_74637952_74638224_74638300_74640483
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003206	chr1	-	1452	10	FSM	ENSMUSG00000026171.13	ENSMUST00000027357.12	1479	10	23	4	-2	1	multi-exon	FALSE	canonical	3	94	junction_3	8.63384096891663	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCCTATGTGGTATGAC	NA	False	NA	NA	False	AATAAA	-26	NA	74640533	74632910	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_74633562_74633718_74633854_74634367_74634461_74634789_74634928_74635024_74635097_74637520_74637591_74637688_74637757_74637851_74637952_74638224_74638300_74640483
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003207	chr1	-	1547	9	NIC	ENSMUSG00000026171.13	novel	1479	10	NA	NA	-2	1	intron_retention	FALSE	canonical	3	94	junction_3	8.63767185067828	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCCTATGTGGTATGAC	NA	False	NA	NA	False	AATAAA	-26	NA	74640533	74632910	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_-_74633562_74633718_74633854_74634367_74634461_74634789_74634928_74635024_74635097_74637520_74637591_74637688_74637952_74638224_74638300_74640483
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003217	chr1	+	194	1	Intergenic	novelGene_115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCAAGACTCATCGTCAC	9040	False	NA	NA	False	NA	NA	NA	74635356	74635550	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_74635400_74635600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003219	chr1	-	220	1	Intergenic	novelGene_116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGATGAAAGGGAACCAAGCC	NA	False	NA	NA	False	NA	NA	NA	74690587	74690367	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_74690400_74690600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003236	chr1	+	227	1	Intergenic	novelGene_117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATGGAGAATGAATTAC	6167	False	NA	NA	False	NA	NA	NA	74722440	74722667	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_74722400_74722700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003245	chr1	+	207	1	Intergenic	novelGene_118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACTTGATATGCACTCAC	NA	False	NA	NA	False	NA	NA	NA	74749455	74749662	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_74749500_74749700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003251	chr1	-	174	1	Intergenic	novelGene_119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATGTAAATTTAACACA	NA	False	NA	NA	False	NA	NA	NA	74756770	74756596	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_74756600_74756800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003258	chr1	+	182	1	Intergenic	novelGene_120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGTATGGATAC	NA	False	NA	NA	False	NA	NA	NA	74958862	74959044	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_74958900_74959000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003270	chr1	+	186	1	Intergenic	novelGene_121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATCACTGCCCAGCTATAA	NA	False	NA	NA	False	NA	NA	NA	75028083	75028269	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_75028100_75028300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003278	chr1	+	189	1	Intergenic	novelGene_122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGCTGAGAACTTAGCA	NA	False	NA	NA	False	NA	NA	NA	75067430	75067619	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_75067400_75067600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003282	chr1	-	2503	9	FSM	ENSMUSG00000033159.15	ENSMUST00000168720.8	3669	9	-45	1211	14	3	multi-exon	TRUE	canonical	3	100	junction_8	23.1405353222435	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTTTTCCTTCTGTAGC	9322	False	NA	-10	True	AATAAA	-20	NA	75119327	75112408	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541_75117651_75118059_75118148_75118701
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003316	chr1	+	1200	10	FSM	ENSMUSG00000026197.13	ENSMUST00000160439.8	1206	10	3	3	3	1	multi-exon	FALSE	canonical	3	87	junction_1	30.0361921605614	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGAGTGCTGTTTCTTT	2035	False	NA	13	True	AGTAAA	-19	NA	75145292	75148270	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_75145352_75145474_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147619_75147693_75147879
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003334	chr1	-	2995	19	FSM	ENSMUSG00000026198.16	ENSMUST00000027396.15	2966	19	-27	-2	-27	2	multi-exon	TRUE	canonical	3	123	junction_18	16.1765910736914	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTGGTTTGGTTGTGTG	NA	False	NA	0	True	AATAAA	-17	NA	75157063	75148358	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_75148633_75148757_75148827_75148909_75149005_75149198_75149312_75149434_75149610_75150188_75150294_75150505_75150564_75150782_75150869_75150969_75151034_75151121_75151199_75151345_75151472_75151616_75151683_75152151_75152262_75152733_75152856_75153946_75154131_75154308_75154411_75154565_75154747_75155574_75155713_75156213
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003354	chr1	+	1514	8	FSM	ENSMUSG00000026201.13	ENSMUST00000027401.11	2876	8	0	1362	0	2	multi-exon	FALSE	canonical	3	167	junction_4	30.7265756142723	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAGGTCAATGTGTCT	NA	False	NA	11	True	AATAAA	-19	NA	75187481	75190888	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75189776_75189873_75190219_75190342_75190457
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003373	chr1	-	2057	4	FSM	ENSMUSG00000026202.14	ENSMUST00000186213.7	2840	4	39	744	-12	0	multi-exon	FALSE	canonical	3	248	junction_2	27.6526068692749	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTGCTTTCTTTTGGC	NA	False	NA	-2	True	ATTAAA	-20	NA	75195899	75191615	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_75193238_75193470_75193620_75193855_75194079_75195836
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003385	chr1	-	174	1	Intergenic	novelGene_123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGTCTTTATTAAAA	10	True	NA	NA	False	NA	NA	NA	75209442	75209268	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_75209300_75209400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003396	chr1	-	1843	15	FSM	ENSMUSG00000026209.16	ENSMUST00000185797.7	2510	15	-1	668	-1	1	multi-exon	FALSE	canonical	3	522	junction_14	119.683362013511	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGTGCTTTTTCTGAA	NA	False	NA	0	True	ATTAAA	-18	NA	75294304	75285207	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293978
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003407	chr1	-	1719	14	FSM	ENSMUSG00000026209.16	ENSMUST00000187836.7	1862	14	143	0	-13	0	multi-exon	FALSE	canonical	3	848	junction_13	52.2384156632446	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCTTTTTCTGA	NA	False	NA	-1	True	ATTAAA	-17	NA	75293650	75285208	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003411	chr1	-	1634	15	FSM	ENSMUSG00000026209.16	ENSMUST00000113605.10	1571	15	-63	0	13	0	multi-exon	FALSE	canonical	3	252	junction_14	185.094639334056	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCTTTTTCTGA	NA	False	NA	-1	True	ATTAAA	-17	NA	75293652	75285208	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293534
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003420	chr1	+	1644	8	ISM	ENSMUSG00000026208.10	ENSMUST00000027409.10	3028	9	1692	857	-9	-857	3prime_fragment	FALSE	canonical	3	24	junction_7	3.01695886884898	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTGTCATCTTGACTG	NA	False	NA	10	True	AATAAA	-21	NA	75338664	75344366	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr1_+_75338863_75338956_75339053_75339208_75339371_75339537_75339664_75340114_75340336_75341971_75342016_75343403_75343487_75343652
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003428	chr1	+	1523	13	FSM	ENSMUSG00000033021.17	ENSMUST00000037796.14	1539	13	21	-5	8	0	multi-exon	FALSE	canonical	3	122	junction_1	48.5514475124641	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGACTCCTACTTGCGC	NA	False	NA	18	True	AATAAA	-22	NA	75412594	75419823	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_75412656_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003434	chr1	+	1805	13	NIC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	-1	1	intron_retention	FALSE	canonical	3	82	junction_1	58.385869199852	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTTGGACTCCTACTT	NA	False	NA	14	True	AATAAA	-18	NA	75412609	75419819	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_+_75412957_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003453	chr1	-	2962	4	FSM	ENSMUSG00000032997.17_ENSMUSG00000026211.19	ENSMUST00000079205.14	2892	4	-73	3	-37	3	multi-exon	FALSE	canonical	3	112	junction_1	2.16024689946929	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAGTGGAAACTGGTAA	NA	False	NA	NA	False	AATAAA	-17	NA	75455988	75451215	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_75452871_75453203_75453384_75453888_75454463_75455435
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003463	chr1	-	3779	8	ISM	ENSMUSG00000026211.19	ENSMUST00000155084.8	4131	12	-742	5807	-22	-4	5prime_fragment	FALSE	canonical	3	33	junction_3	4.13546137889432	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACCTCATGGTAAATAAG	NA	False	NA	NA	False	AATAAA	-21	NA	75483027	75472984	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr1_-_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75481856
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003472	chr1	+	4048	25	FSM	ENSMUSG00000026213.16	ENSMUST00000027414.16	4458	25	10	400	10	0	multi-exon	FALSE	canonical	3	17	junction_1	11.130538571376	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGACTCTGGAAGTCAC	2750	False	NA	18	True	AATAAA	-17	NA	75498182	75513579	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_75498287_75498407_75498494_75501326_75501533_75501731_75501807_75502062_75502159_75502495_75502604_75502730_75502803_75503701_75503829_75504006_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75504952_75505038_75505554_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003490	chr1	-	6341	18	FSM	ENSMUSG00000026235.15	ENSMUST00000027451.13	6328	18	-10	-3	-10	3	multi-exon	TRUE	canonical	3	112	junction_15	30.5422731607683	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTTGTCTTTGTTCTGT	NA	False	NA	0	True	AATAAA	-26	NA	77491735	77343818	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_77346309_77349546_77350485_77351407_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184_77483849_77488319_77488388_77491577
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003495	chr1	+	269	1	Intergenic	novelGene_124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGTCATTTATGAGGAG	NA	False	NA	NA	False	NA	NA	NA	77392063	77392332	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_77392100_77392300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003503	chr1	-	2034	18	FSM	ENSMUSG00000026245.17	ENSMUST00000170217.8	2036	18	3	-1	3	1	multi-exon	FALSE	canonical	3	22	junction_1	335.563627493931	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGGCTCTGCTACTATC	NA	False	NA	NA	False	AATAAA	-19	NA	78465493	78394610	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_78394860_78401829_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456749_78458944_78459001_78465421
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003509	chr1	-	1920	17	FSM	ENSMUSG00000026245.17	ENSMUST00000068333.14	1951	17	15	16	15	1	multi-exon	FALSE	canonical	3	979	junction_9	154.241693455434	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGCGTAGCTGCATTAG	NA	False	NA	-1	True	AATAAA	-20	NA	78465519	78401720	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456749_78458944_78459001_78465421
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003520	chr1	-	1799	17	FSM	ENSMUSG00000026245.17	ENSMUST00000189529.7	1801	17	2	0	-1	0	multi-exon	FALSE	canonical	3	42	junction_15	338.950378927359	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTGCGTAGCTGCATTA	NA	False	NA	-2	True	AATAAA	-19	NA	78465497	78401721	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456651_78458944_78459001_78465421
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003530	chr1	+	200	1	Intergenic	novelGene_125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAAAGCAGTATTT	NA	False	NA	NA	False	NA	NA	NA	78601419	78601619	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_78601400_78601600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003535	chr1	+	3780	15	FSM	ENSMUSG00000032883.16	ENSMUST00000142704.8	2976	15	-31	-773	27	-3	multi-exon	TRUE	canonical	3	358	junction_1	36.8929090028677	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGCCTCTTCAGAGTCT	NA	False	NA	4	True	AATAAA	-16	NA	78635568	78685457	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_78635821_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003562	chr1	-	4525	12	FSM	ENSMUSG00000073643.12	ENSMUST00000113512.8	4551	12	26	0	-5	0	multi-exon	FALSE	canonical	3	564	junction_7	59.0382982576312	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTAATTTTGTTTGCT	NA	False	NA	0	True	AATAAA	-23	NA	79739460	79679978	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003570	chr1	+	1334	4	FSM	ENSMUSG00000026248.10	ENSMUST00000027464.9	1424	4	92	-2	-6	2	multi-exon	FALSE	canonical	3	315	junction_2	2.44948974278318	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTCCTTTCTTTATTG	NA	False	NA	15	True	AATAAA	-17	NA	79753826	79759164	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_79754029_79755574_79756044_79757204_79757384_79758680
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003577	chr1	-	2036	9	FSM	ENSMUSG00000026249.11	ENSMUST00000027467.11	2210	9	60	114	-1	-114	multi-exon	FALSE	canonical	3	45	junction_4	6.12244844812923	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACCATTTGCTGTCAAGC	NA	False	NA	5	True	AATAAA	-24	NA	79836353	79772027	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_79772760_79774542_79774627_79777184_79777272_79779172_79779274_79780563_79780763_79788270_79788469_79794444_79794673_79798993_79799275_79836227
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003587	chr1	+	200	1	Intergenic	novelGene_126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAACCCTAGCTAATTAA	NA	False	NA	NA	False	NA	NA	NA	80239213	80239413	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_80239200_80239400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003599	chr1	-	4938	16	FSM	ENSMUSG00000004364.15	ENSMUST00000163119.8	4709	16	-229	0	-229	0	multi-exon	FALSE	canonical	3	483	junction_14	55.1621448297854	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTCTTTATGTCAGTGAA	NA	False	NA	NA	False	AATAAA	-21	NA	80318426	80242639	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003619	chr1	+	3516	7	FSM	ENSMUSG00000026142.16	ENSMUST00000027322.14	3636	7	120	0	-70	0	multi-exon	FALSE	canonical	3	170	junction_1	15.8893745069534	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTGCTCGAGTCA	NA	False	NA	14	True	AATAAA	-20	NA	82294292	82423087	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_82294370_82318039_82318552_82320450_82320584_82346012_82346102_82348054_82348112_82355281_82355426_82420583
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003636	chr1	+	1650	7	NIC	ENSMUSG00000026150.15	novel	1706	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	164	junction_4	124.696520489636	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTCTATGGAAAGATT	NA	False	NA	13	True	AATAAA	-13	NA	82702638	82730111	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713136_82713229_82728240_82728326_82729305
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003637	chr1	+	1710	8	FSM	ENSMUSG00000026150.15	ENSMUST00000073025.12	1706	8	-1	-3	0	0	multi-exon	FALSE	canonical	3	146	junction_5	154.121870675152	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTCTATGGAAAGATT	NA	False	NA	13	True	AATAAA	-13	NA	82702638	82730111	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713136_82713229_82724803_82724864_82728240_82728326_82729305
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003643	chr1	+	1647	7	NIC	ENSMUSG00000026150.15	novel	1715	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	326	junction_5	73.6809940818451	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTCTATGGAAAGATT	NA	False	NA	13	True	AATAAA	-13	NA	82702638	82730111	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713139_82713229_82728240_82728326_82729305
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003644	chr1	+	1707	8	FSM	ENSMUSG00000026150.15	ENSMUST00000160786.8	1645	8	-22	-40	0	0	multi-exon	FALSE	canonical	3	146	junction_5	134.32947615198	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTCTATGGAAAGATT	NA	False	NA	13	True	AATAAA	-13	NA	82702638	82730111	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713139_82713229_82724803_82724864_82728240_82728326_82729305
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003647	chr1	+	1866	9	FSM	ENSMUSG00000026150.15	ENSMUST00000078332.13	1894	9	28	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	190.780264637095	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTCTATGGAAAGATT	NA	False	NA	13	True	AATAAA	-13	NA	82702638	82730111	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713139_82713229_82719538_82719698_82724803_82724864_82728240_82728326_82729305
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003666	chr1	-	180	1	Intergenic	novelGene_127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAGAAAGGACAGT	9557	False	NA	NA	False	NA	NA	NA	82801051	82800871	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_82800900_82801100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003674	chr1	+	7892	13	FSM	ENSMUSG00002074851.1_ENSMUSG00000026159.14	ENSMUST00000186302.7	2352	13	-214	-5326	14	-181	multi-exon	FALSE	canonical	3	369	junction_12	56.7364154078607	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGATGGCCTCTTCAATTG	NA	False	NA	9	True	AATAAA	-22	NA	82817180	82878722	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003679	chr1	+	3266	13	FSM	ENSMUSG00000026159.14	ENSMUST00000189220.7	8044	13	-23	4801	-23	0	multi-exon	FALSE	canonical	3	119	junction_11	113.067826251915	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTAAGTTATGAATTTTG	NA	False	NA	14	True	ATTAAA	-20	NA	82817180	82874102	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872202_82872289_82872719
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003693	chr1	+	3256	13	Fusion	ENSMUSG00002074851.1_ENSMUSG00000026159.14	novel	2352	13	NA	NA	-10	0	multi-exon	FALSE	canonical	3	110	junction_8	115.942843916973	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTAAGTTATGAATTTTG	NA	False	NA	14	True	ATTAAA	-20	NA	82817193	82874102	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863834_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003709	chr1	-	200	1	Intergenic	novelGene_128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAATCTGGAAAAGGGAG	NA	False	NA	NA	False	AAAACA	-5	NA	83158906	83158706	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_83158700_83158900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003722	chr1	-	258	1	Intergenic	novelGene_129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCCGTTTCTTGTGG	NA	False	NA	-5	True	NA	NA	NA	84310214	84309956	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_84310000_84310200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003748	chr1	-	6390	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-34	-40	at_least_one_novel_splicesite	TRUE	canonical	3	92	junction_25	267.718380895604	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7853	False	NA	-23	True	AATAAA	-19	NA	84817066	84702024	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816949
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003759	chr1	-	6553	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9476	-40	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_41	270.908748968537	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	NA	False	NA	-23	True	AATAAA	-19	NA	84827713	84702024	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84822070_84822113_84827643
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003797	chr1	+	196	1	Intergenic	novelGene_130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAACCCTGTCTTAAAAC	NA	False	NA	NA	False	NA	NA	NA	84796191	84796387	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_84796200_84796400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003807	chr1	+	202	1	Intergenic	novelGene_131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCCTTATCCTTCCCCA	3873	False	NA	NA	False	NA	NA	NA	84843785	84843987	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_84843800_84844000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003816	chr1	-	183	1	Intergenic	novelGene_132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAATAGTTCTCTT	8621	False	NA	NA	False	NA	NA	NA	84883284	84883101	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_84883100_84883300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003833	chr1	+	215	1	Intergenic	novelGene_133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAGAAACTTAGACTAGAG	2590	False	NA	NA	False	AAGAAA	-17	NA	85603668	85603883	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_85603700_85603900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003836	chr1	+	3840	9	FSM	ENSMUSG00000036707.17	ENSMUST00000113360.8	3805	9	-33	-2	-33	2	multi-exon	FALSE	canonical	3	335	junction_1	34.2579826463848	261	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGATGTCCTTTAGACAG	NA	False	NA	17	True	AATAAA	-18	NA	85721128	85779299	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_85721543_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003850	chr1	-	187	1	Intergenic	novelGene_134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTTAATAATACTGC	567	False	NA	NA	False	NA	NA	NA	85736007	85735820	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_85735800_85736000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003859	chr1	+	1968	6	FSM	ENSMUSG00000026223.16	ENSMUST00000027425.16	2230	6	279	-17	-59	17	multi-exon	FALSE	canonical	3	192	junction_3	14.9853261559434	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTCTGACTTTGGCCCT	NA	False	NA	9	True	NA	NA	NA	85822280	85836413	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_85822511_85830730_85830872_85832934_85833124_85834142_85834254_85834728_85834880_85835267
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003864	chr1	+	3274	25	FSM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	-10	-152	-10	152	multi-exon	FALSE	canonical	3	1352	junction_6	102.249660417801	1018	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGATTTGTTTTTCTTGTT	NA	False	NA	33	True	AATAAA	-33	NA	85992330	86067025	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003881	chr1	+	2191	21	FSM	ENSMUSG00000062590.14	ENSMUST00000131412.8	2160	21	-27	-4	2	4	multi-exon	FALSE	canonical	3	78	junction_14	12.2982722363753	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCTCTTTATTGTTTAT	NA	False	NA	12	True	AATAAA	-17	NA	86082509	86180215	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179998
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003889	chr1	+	204	1	Intergenic	novelGene_135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTGATTGAGGCTGGCT	NA	False	NA	NA	False	NA	NA	NA	86210416	86210620	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_86210400_86210600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003909	chr1	-	3353	14	FSM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	-58	4907	-58	869	multi-exon	FALSE	canonical	3	5685	junction_13	926.263678639546	3754	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGTTTTTTTGTTTTT	NA	False	NA	-7	True	AATGAA	-23	NA	86287180	86277347	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003942	chr1	-	184	1	Intergenic	novelGene_136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCACAGAAATATAACAAGA	7790	False	NA	NA	False	NA	NA	NA	86340226	86340042	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_86340000_86340200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003948	chr1	+	280	1	Intergenic	novelGene_137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCCTGGCATATAGCTC	NA	False	NA	NA	False	ATTAAA	-6	NA	86383516	86383796	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_86383500_86383800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003963	chr1	+	1213	5	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	-5	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9439.51567547297	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCTCAAAGCCTGGTT	NA	False	NA	45	True	AATAAA	-34	NA	86454442	86458422	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr1_+_86454673_86456894_86456967_86457177_86457279_86457452_86457527_86457686
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003965	chr1	+	1112	4	FSM	ENSMUSG00000026238.15	ENSMUST00000186255.7	768	4	-15	-329	-5	-12	multi-exon	FALSE	canonical	3	33	junction_2	10628.523175347	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCTCAAAGCCTGGTT	NA	False	NA	45	True	AATAAA	-34	NA	86454442	86458422	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_86454673_86456894_86456967_86457452_86457527_86457686
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003976	chr1	+	3820	2	NIC	ENSMUSG00000026238.15	novel	768	4	NA	NA	-5	-12	intron_retention	FALSE	canonical	3	24081	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCTCAAAGCCTGGTT	NA	False	NA	45	True	AATAAA	-34	NA	86454442	86458422	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_+_86457527_86457686
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003982	chr1	+	3980	1	Genic_Genomic	ENSMUSG00000026238.15	novel	NA	NA	NA	NA	-5	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCTCAAAGCCTGGTT	NA	False	NA	45	True	AATAAA	-34	NA	86454442	86458422	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr1_+_86454400_86458400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000003985	chr1	+	1597	3	NIC	ENSMUSG00000026238.15	novel	768	4	NA	NA	-4	-12	intron_retention	FALSE	canonical	3	20695	junction_1	1693	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCTCAAAGCCTGGTT	NA	False	NA	45	True	AATAAA	-34	NA	86454443	86458422	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_+_86454673_86456894_86457527_86457686
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004019	chr1	-	187	1	Intergenic	novelGene_138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTACAGCCGGGCGTGGT	NA	False	NA	NA	False	NA	NA	NA	86513481	86513294	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_86513300_86513500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004022	chr1	+	2643	7	FSM	ENSMUSG00000026240.13	ENSMUST00000027446.11	2231	7	-88	-324	-88	-154	multi-exon	FALSE	canonical	3	303	junction_3	30.6743649757687	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCATATCCTCACTGAAGT	NA	False	NA	16	True	NA	NA	NA	86514733	86534546	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_86514958_86516885_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004040	chr1	+	210	1	Intergenic	novelGene_139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCAAATAAGGTATAATTAA	NA	False	NA	NA	False	TTTAAA	-6	NA	86578642	86578852	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_86578600_86578900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004050	chr1	+	3127	21	FSM	ENSMUSG00000053333.16	ENSMUST00000065694.8	3085	21	-38	-4	-3	1	multi-exon	FALSE	canonical	3	71	junction_5	12.4998999996	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGTAGATGCCATGG	NA	False	NA	16	True	AATAAA	-17	NA	86631526	86977818	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_86631594_86672402_86672551_86673062_86673221_86681948_86682003_86688009_86688112_86748943_86749173_86782081_86782183_86784848_86785097_86806124_86806299_86858475_86858556_86887464_86887578_86901121_86901230_86917813_86918048_86948759_86948840_86971738_86971923_86972551_86972639_86974758_86974907_86975169_86975301_86975409_86975515_86976554_86976657_86977344
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004089	chr1	+	3586	7	NIC	ENSMUSG00000026254.18	novel	3394	7	NA	NA	-15	-234	intron_retention	FALSE	canonical	3	212	junction_6	831.352646126914	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGCTGTGGACTTGTCAA	NA	False	NA	18	True	AATAAA	-21	NA	87141685	87167976	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87165567
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004106	chr1	+	3663	8	NNC	ENSMUSG00000026254.18	novel	3473	8	NA	NA	-1	-236	intron_retention	FALSE	canonical	3	16	junction_7	1019.03467726539	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGGCTGTGGACTTGTC	NA	False	NA	16	True	AATAAA	-19	NA	87141699	87167974	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87164477_87164571_87165567
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004124	chr1	+	5683	29	FSM	ENSMUSG00000048000.16	ENSMUST00000172794.8	4029	29	-3	-1651	-3	0	multi-exon	FALSE	canonical	3	42	junction_9	32.8746847583241	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGGTCTCTCTGAG	NA	False	NA	7	True	AATAAA	-17	NA	87254747	87378518	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334723_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004129	chr1	+	2951	4	FSM	ENSMUSG00000048000.16	ENSMUST00000174583.8	3015	4	-1	65	0	-65	multi-exon	FALSE	canonical	3	38	junction_3	78.7922726047562	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTTTCAGTGTTTGTTA	NA	False	NA	NA	False	NA	NA	NA	87254750	87285441	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87282702
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004130	chr1	+	5698	29	FSM	ENSMUSG00000048000.16	ENSMUST00000027475.15	5724	29	26	0	0	0	multi-exon	FALSE	canonical	3	77	junction_9	29.4000164861817	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGGTCTCTCTGAG	NA	False	NA	7	True	AATAAA	-17	NA	87254750	87378518	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334705_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004150	chr1	+	192	1	Intergenic	novelGene_140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAGAAGTTAACATAGAA	6678	False	NA	NA	False	NA	NA	NA	87601268	87601460	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_87601300_87601500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004160	chr1	+	4143	22	FSM	ENSMUSG00000026288.15	ENSMUST00000167032.2	4125	22	-12	-6	-12	1	multi-exon	FALSE	canonical	3	377	junction_4	52.3837661581916	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGACTGTGTGGTATC	9358	False	NA	20	True	AATAAA	-21	NA	87603948	87648230	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004172	chr1	+	3920	23	FSM	ENSMUSG00000026288.15	ENSMUST00000170300.8	3942	23	28	-6	28	1	multi-exon	FALSE	canonical	3	151	junction_20	86.0654661453124	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGACTGTGTGGTATC	9398	False	NA	20	True	AATAAA	-21	NA	87603988	87648230	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004182	chr1	+	3051	17	FSM	ENSMUSG00000026289.16	ENSMUST00000113186.8	3004	17	-43	-4	20	1	multi-exon	FALSE	canonical	3	160	junction_8	19.4867743610891	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGCGTCTTGATTGTCT	7265	False	NA	21	True	AATAAA	-30	NA	87683754	87720148	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004200	chr1	+	200	1	ISM	ENSMUSG00000056055.14	ENSMUST00000130886.8	1886	9	21169	252	-1639	-252	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGGACATTAGAAGTCA	NA	False	NA	NA	False	NA	NA	NA	87752570	87752770	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr1_+_87752600_87752800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004220	chr1	+	5692	30	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_27	65.4014948539556	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATTCCTGTCCTCAT	4061	False	NA	20	True	AATAAA	-24	NA	87780999	87872212	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867910_87868029_87869090_87869222_87870104
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004232	chr1	-	5312	32	FSM	ENSMUSG00000005501.15	ENSMUST00000187758.7	3977	32	-13	-1322	3	0	multi-exon	FALSE	canonical	3	37	junction_30	6.87528260700014	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGTCATATACTGCCT	NA	False	NA	-9	True	AATAAA	-24	NA	87936269	87872842	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_87874430_87876223_87876319_87877653_87877750_87877880_87878092_87879364_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890211_87893027_87893065_87894905_87894993_87895231_87895321_87896117_87896172_87901798_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623_87913922_87916606_87916715_87917783_87917880_87921895_87922025_87923432_87923577_87925534_87925682_87927461_87927627_87930130_87930245_87931968_87932037_87934946_87935165_87936159
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004262	chr1	+	239	2	Intergenic	novelGene_141	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTCTTTTTTTAACTT	NA	False	NA	NA	False	NA	NA	NA	88500828	88531313	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_88500860_88531105
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004270	chr1	+	1807	1	Intergenic	novelGene_142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	88541724	88543531	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_88541700_88543500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004271	chr1	-	3947	1	FSM	ENSMUSG00000049866.13	ENSMUST00000159814.2	3997	1	50	0	50	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGGAGGCGTTTTCTGT	NA	False	NA	NA	False	AATAAA	-18	NA	88629893	88625946	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_88625900_88629900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004294	chr1	+	4303	18	FSM	ENSMUSG00000055013.17	ENSMUST00000027521.15	11921	18	-22	7640	-22	-24	multi-exon	FALSE	canonical	3	334	junction_11	41.2693909545293	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTGATTTTTGCACAGA	NA	False	NA	15	True	AATAAA	-16	NA	89382505	89817699	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004300	chr1	+	1779	13	ISM	ENSMUSG00000055013.17	ENSMUST00000190096.7	4078	17	418	55413	36	0	5prime_fragment	FALSE	canonical	3	77	junction_11	99.7240637403475	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGTCCACAGCAGGCTG	NA	False	NA	NA	False	NA	NA	NA	89383013	89762310	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89716884_89717047_89762155
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004311	chr1	+	198	1	Intergenic	novelGene_143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCACTTGTGTGTCTCGTG	NA	False	NA	16	True	NA	NA	NA	89843856	89844054	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_89843900_89844100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004330	chr1	-	2075	12	FSM	ENSMUSG00000026301.17	ENSMUST00000189690.7	2060	12	-12	-3	-12	0	multi-exon	FALSE	canonical	3	59	junction_8	12	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTAATTTGGTCACTGG	NA	False	NA	-1	True	AATAAA	-20	NA	90017878	89969853	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_89970465_89973313_89973553_89975510_89975689_89980109_89980197_89994446_89994647_89998233_89998342_90001468_90001552_90005528_90005597_90008581_90008675_90009037_90009145_90017196_90017273_90017653
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004342	chr1	+	2017	2	FSM	ENSMUSG00000044337.6	ENSMUST00000065587.5	3065	2	21	1027	-5	-1027	multi-exon	FALSE	canonical	3	47	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCATGTGTGCTTTGGGTT	NA	False	NA	10	True	AATAAA	-18	NA	90131722	90143446	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_90131810_90141516
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004351	chr1	+	1801	8	FSM	ENSMUSG00000034432.12	ENSMUST00000036153.12	2287	8	487	-1	-8	1	multi-exon	FALSE	canonical	3	708	junction_7	24.8185250100297	279	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAGTGGGTTACCTAAT	NA	False	NA	22	True	ATTAAA	-23	NA	90531189	90541064	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_90531350_90532096_90532168_90533185_90533235_90534258_90534392_90537814_90537923_90538696_90538760_90539261_90539310_90539895
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004362	chr1	+	3717	9	NIC	ENSMUSG00000026305.16	novel	3645	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_5	16.4088390814219	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCTACTGGTTGTTCTG	NA	False	NA	4	True	AATAAA	-18	NA	90981175	91045037	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91039877_91040020_91042317
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004377	chr1	+	3906	16	FSM	ENSMUSG00000070732.3	ENSMUST00000094698.2	3851	16	-51	-4	-37	4	multi-exon	TRUE	canonical	3	84	junction_2	27.1317771871533	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTGCTTTCTGTAGTG	4213	False	NA	15	True	AATAAA	-21	NA	91072773	91098521	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004414	chr1	+	188	1	Intergenic	novelGene_144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	695	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTCCTTAGCTGCTGCC	NA	False	NA	NA	False	NA	NA	NA	91231403	91231591	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_91231400_91231600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004432	chr1	-	1414	12	FSM	ENSMUSG00000026309.15	ENSMUST00000027534.13	1368	12	-42	-4	-10	4	multi-exon	FALSE	canonical	3	426	junction_9	38.9197096809944	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTGACTGGTCCTGAG	NA	False	NA	-4	True	AATAAA	-22	NA	91326547	91303548	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316187_91318328_91318386_91318853_91318920_91326372
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004443	chr1	-	1318	4	FSM	ENSMUSG00000067071.9	ENSMUST00000086851.2	1335	4	2	15	2	-15	multi-exon	FALSE	canonical	3	93	junction_1	18.4932420089069	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTGTACTGTCATTGA	NA	False	NA	-16	True	AATAAA	-20	NA	91340942	91339219	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_91340205_91340442_91340525_91340614_91340702_91340778
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004448	chr1	-	1556	3	FSM	ENSMUSG00000067071.9	ENSMUST00000126136.8	1573	3	2	15	2	-15	multi-exon	FALSE	canonical	3	120	junction_1	9	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTGTACTGTCATTGA	NA	False	NA	-16	True	AATAAA	-20	NA	91340942	91339219	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_91340525_91340614_91340702_91340778
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004456	chr1	+	3509	15	FSM	ENSMUSG00000034292.14	ENSMUST00000047242.9	3474	15	-35	0	12	0	multi-exon	FALSE	canonical	2	37	junction_5	6.41943795619752	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATGGACTGTCAAATTT	8949	False	NA	8	True	ATTAAA	-24	NA	91422380	91457029	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_91422611_91425674_91425744_91427223_91427386_91428494_91428633_91428726_91429147_91433144_91433217_91435214_91435291_91446015_91446037_91447299_91447385_91447777_91447862_91448605_91448730_91448908_91448946_91450552_91450630_91453600_91453825_91455339
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004464	chr1	+	188	1	Intergenic	novelGene_145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTCGTAGTAGTTAAAAG	9435	False	NA	NA	False	NA	NA	NA	91452326	91452514	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_91452300_91452500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004469	chr1	+	187	1	Intergenic	novelGene_146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCATTCAAATATCAAAGG	NA	False	NA	NA	False	NA	NA	NA	91481490	91481677	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_91481500_91481700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004478	chr1	-	4366	27	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	8	25	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_11	23.5064198709189	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGACAGAACAGAAATGTG	6606	False	NA	NA	False	AAGAAA	-35	NA	92108011	91860453	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004506	chr1	-	402	3	FSM	ENSMUSG00000073616.11	ENSMUST00000097642.4	438	3	24	12	24	-12	multi-exon	FALSE	canonical	3	610	junction_1	1	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGATTTTAATTCCTGTG	NA	False	NA	-31	True	AATAAA	-18	NA	92569683	92564878	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_92565126_92567408_92567482_92569601
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004514	chr1	-	189	1	Intergenic	novelGene_147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCAGTCTGCTACCATA	NA	False	NA	NA	False	NA	NA	NA	92588502	92588313	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_92588300_92588500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004524	chr1	+	3095	11	FSM	ENSMUSG00000026269.15	ENSMUST00000027487.15	3337	11	-19	261	-19	8	multi-exon	FALSE	canonical	3	45	junction_1	7.72334124585985	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCTTCCTGTCTGTCAC	6638	False	NA	27	True	ATTAAA	-21	NA	92838485	92848302	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_92839206_92842780_92842922_92843535_92843688_92844076_92844194_92844432_92844669_92844868_92844983_92845355_92845469_92845739_92845849_92846594_92846826_92846905_92847049_92847283
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004538	chr1	+	2556	12	FSM	ENSMUSG00000026270.12	ENSMUST00000027488.11	2902	12	353	-7	-37	7	multi-exon	FALSE	canonical	3	87	junction_4	15.6743724089108	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTGTTCCAAAAAGCCCA	2613	False	NA	NA	False	AATAAA	-21	NA	92862450	92875670	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_92862737_92865666_92865799_92867044_92867242_92868004_92868223_92870203_92870346_92871021_92871189_92871400_92871664_92872416_92872620_92872738_92873001_92874495_92874696_92874936_92874983_92875230
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004565	chr1	-	5073	18	FSM	ENSMUSG00000026274.12	ENSMUST00000027493.4	5779	18	0	706	0	354	multi-exon	FALSE	canonical	3	108	junction_17	39.6765468974106	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCCAGGACTATATGAGA	NA	False	NA	-45	True	ATTAAA	-22	NA	93270511	93237205	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270247
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004598	chr1	-	6354	28	FSM	ENSMUSG00000034088.16	ENSMUST00000170883.8	6231	28	-123	0	-109	0	multi-exon	FALSE	canonical	3	431	junction_27	59.547263104276	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGTGATGGGACTCAT	NA	False	NA	-10	True	AATAAA	-14	NA	93406646	93333661	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004620	chr1	+	3234	13	FSM	ENSMUSG00000026276.21	ENSMUST00000027495.15	3779	13	18	527	-8	-527	multi-exon	FALSE	canonical	3	766	junction_1	78.56892762975	448	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406703	93437455	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_93406791_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004622	chr1	+	3225	13	FSM	ENSMUSG00000116048.2	ENSMUST00000179353.8	3219	13	-6	0	-6	0	multi-exon	FALSE	canonical	3	41	junction_1	266.051999929838	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406708	93437455	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_93406791_93416849_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004630	chr1	+	3359	14	NIC	ENSMUSG00000116048.2	novel	3219	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	343.313233551171	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406714	93437455	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_+_93406791_93407185_93407322_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004646	chr1	+	3269	13	FSM	ENSMUSG00000116048.2	ENSMUST00000168776.8	3267	13	-2	0	-2	0	multi-exon	FALSE	canonical	3	67	junction_1	258.994798317564	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406780	93437455	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_93406903_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004663	chr1	+	194	1	Intergenic	novelGene_148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGAAATCATGTAGAGAAT	NA	False	NA	NA	False	NA	NA	NA	93414269	93414463	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_93414300_93414500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004678	chr1	-	191	1	Intergenic	novelGene_149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATTACAACAGTGTACT	NA	False	NA	NA	False	NA	NA	NA	93447254	93447063	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_93447100_93447300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004693	chr1	-	178	1	Intergenic	novelGene_150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTACAAGAGAATACATGGA	NA	False	NA	NA	False	NA	NA	NA	93588729	93588551	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_93588600_93588700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004712	chr1	+	2989	13	FSM	ENSMUSG00000026280.18	ENSMUST00000027502.16	4173	13	8	1176	8	-1176	multi-exon	FALSE	canonical	3	280	junction_10	29.445217495093	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGTGTGTGTGTGTTGA	NA	False	NA	NA	False	GATAAA	-22	NA	93682634	93717156	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_93682777_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93712621_93713631_93713689_93714232_93714327_93715407
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004727	chr1	-	1800	5	FSM	ENSMUSG00000026281.16	ENSMUST00000027503.14	1003	5	19	-816	-9	816	multi-exon	FALSE	canonical	3	1212	junction_3	505.005136112495	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAGTCTCTCGTGAGATC	2329	False	NA	-15	True	NA	NA	NA	93729637	93719481	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_93720666_93722447_93722646_93726101_93726193_93728523_93728633_93729419
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004769	chr1	-	178	1	Intergenic	novelGene_151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAGATAGAAGAGCAG	NA	False	NA	NA	False	NA	NA	NA	93755365	93755187	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_93755200_93755400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004771	chr1	+	213	1	Intergenic	novelGene_152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGGAAGGACCGAGATCA	NA	False	NA	NA	False	NA	NA	NA	93791969	93792182	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_93792000_93792200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004781	chr1	+	189	1	Intergenic	novelGene_153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAACACTATAGTGACCTT	1084	False	NA	NA	False	NA	NA	NA	94017994	94018183	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_94018000_94018200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004784	chr1	+	190	1	Intergenic	novelGene_154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTGTAGGACATCTGTC	NA	False	NA	NA	False	NA	NA	NA	94105369	94105559	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_94105400_94105600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004791	chr1	+	630	1	FSM	ENSMUSG00000081051.5	ENSMUST00000117288.2	531	1	-37	-62	-37	62	mono-exon	FALSE	NA	NA	NA	NA	NA	2506	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGGAACCAAGACATTAG	NA	False	NA	NA	False	NA	NA	NA	95426308	95426938	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_95426300_95426900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004811	chr1	+	170	1	Antisense	novelGene_ENSMUSG00000044768.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAGGGAGGGAGGG	6803	False	NA	NA	False	NA	NA	NA	97570526	97570696	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr1_+_97570500_97570700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004818	chr1	-	2713	3	FSM	ENSMUSG00000044768.17	ENSMUST00000053033.14	40378	3	78	37587	78	-2	multi-exon	FALSE	canonical	3	49	junction_2	5.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATTGTTTCGTGGTGTTT	NA	False	NA	-3	True	AATAAA	-16	NA	97589721	97571629	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_97574087_97582324_97582415_97589555
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004843	chr1	+	3836	1	Antisense	novelGene_ENSMUSG00000040648.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGAGCATGCAAAGTTAGA	NA	False	NA	NA	False	NA	NA	NA	97645211	97649047	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr1_+_97645200_97649000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004857	chr1	+	187	1	Intergenic	novelGene_155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATATCAAAGGACCATGGT	NA	False	NA	NA	False	NA	NA	NA	100311831	100312018	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_100311800_100312000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004864	chr1	+	206	1	Intergenic	novelGene_156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAAAAATTCTAGGTAGG	NA	False	NA	NA	False	NA	NA	NA	102020973	102021179	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_102021000_102021200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004869	chr1	+	275	1	Intergenic	novelGene_157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATAATCAAACTTAGAAAG	NA	False	NA	NA	False	ATTAAA	-39	NA	103095244	103095519	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_103095200_103095500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004875	chr1	+	209	1	Intergenic	novelGene_158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCAGACATTGCCACATC	NA	False	NA	NA	False	NA	NA	NA	103498244	103498453	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_103498200_103498500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004884	chr1	+	2959	1	Genic_Genomic	ENSMUSG00000067017.6	novel	NA	NA	NA	NA	-18	82	mono-exon	FALSE	NA	NA	NA	NA	NA	495	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACTTTTAAAGTTAAATAC	NA	False	NA	NA	False	AATACA	-31	NA	105383677	105386636	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr1_+_105383700_105386600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004888	chr1	+	199	1	Intergenic	novelGene_159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTTCATCTTTCT	NA	False	NA	NA	False	NA	NA	NA	105418588	105418787	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_105418600_105418800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004902	chr1	+	197	1	Antisense	novelGene_ENSMUSG00000056536.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTGTTATGATAGTATGC	NA	False	NA	NA	False	NA	NA	NA	105556151	105556348	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr1_+_105556200_105556300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004928	chr1	+	199	1	Intergenic	novelGene_160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCTGCTTTCAGTGCAG	NA	False	NA	NA	False	AAGAAA	-3	NA	105646764	105646963	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_105646800_105647000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004951	chr1	+	175	1	Intergenic	novelGene_161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAGAAAGTTGTTCTG	NA	False	NA	NA	False	NA	NA	NA	106065801	106065976	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_106065800_106066000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004959	chr1	+	191	1	Intergenic	novelGene_162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTCCATGTAAAAAACCT	NA	False	NA	NA	False	NA	NA	NA	106109419	106109610	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_106109400_106109600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004978	chr1	-	2888	11	FSM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	19	1726	19	-1726	multi-exon	TRUE	canonical	3	455	junction_4	35.0793386482699	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTTTTATATGTTTT	43	False	NA	0	True	AGTAAA	-15	NA	106724439	106698885	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106724150
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004981	chr1	+	189	1	Intergenic	novelGene_163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATATAGAGCAATAGCTTT	NA	False	NA	NA	False	NA	NA	NA	107488427	107488616	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_107488400_107488600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004986	chr1	+	202	1	Intergenic	novelGene_164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATAGCAATCAGGTAGGC	NA	False	NA	NA	False	NA	NA	NA	107985494	107985696	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_107985500_107985700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004991	chr1	-	227	1	Intergenic	novelGene_165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCTTAGAGCCTGAAACA	NA	False	NA	NA	False	NA	NA	NA	111220439	111220212	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_111220200_111220400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000004994	chr1	+	198	1	Intergenic	novelGene_166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATTAAAGATATTTCAAA	NA	False	NA	NA	False	NA	NA	NA	111824481	111824679	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_111824500_111824700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005004	chr1	+	178	1	Intergenic	novelGene_167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATATTAACAGATGAGAT	NA	False	NA	NA	False	NA	NA	NA	113451359	113451537	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_113451400_113451500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005029	chr1	+	1915	7	FSM	ENSMUSG00000026377.13	ENSMUST00000027626.13	1889	7	-16	-10	-16	10	multi-exon	FALSE	canonical	3	402	junction_6	29.1985539976821	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTTAAATTTATTTAT	NA	False	NA	16	True	NA	NA	NA	118249552	118261562	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_118249728_118251311_118251456_118255354_118255464_118257082_118257295_118258335_118258393_118260073_118260209_118260479
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005043	chr1	+	7175	36	NIC	ENSMUSG00000064302.14	novel	7207	37	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_24	43.3379317288056	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGACCTTTTGAGTTTTTC	NA	False	NA	3	True	NA	NA	NA	118317179	118537187	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_+_118317252_118347169_118347649_118387530_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118449556_118449665_118453026_118453186_118466995_118467100_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005048	chr1	+	9267	15	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_14	461.494135103247	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCTGGAACCTCAACTT	NA	False	NA	19	True	AATAAA	-20	NA	118555674	118612898	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605120
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005049	chr1	+	9287	15	FSM	ENSMUSG00000026380.11	ENSMUST00000027629.10	9269	15	-1	-17	0	17	multi-exon	FALSE	canonical	3	1477	junction_7	202.362891350955	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTTTGTTTATTGAACT	NA	False	NA	36	True	AATAAA	-37	NA	118555674	118612915	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005099	chr1	-	2289	5	FSM	ENSMUSG00000004451.15	ENSMUST00000004565.15	2289	5	0	0	0	0	multi-exon	FALSE	canonical	3	967	junction_4	66.8169140263152	939	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGCCCTTTTTCCTGCAT	NA	False	NA	-4	True	AATAAA	-21	NA	119432524	119398034	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_119399556_119403624_119403803_119405644_119405854_119411223_119411387_119432306
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005119	chr1	+	2077	1	FSM	ENSMUSG00000098923.2	ENSMUST00000183952.2	2824	1	-10	757	-10	-757	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGTGTGAAGATATGT	NA	False	NA	35	True	NA	NA	NA	119453879	119455956	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_119453900_119456000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005125	chr1	-	6482	25	FSM	ENSMUSG00000026383.15	ENSMUST00000052404.13	6442	25	-30	-10	-30	10	multi-exon	FALSE	canonical	3	76	junction_7	8.61674322983393	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGCTGTTTCTTGAGCA	NA	False	NA	-1	True	AATAAA	-23	NA	119576696	119472756	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_119476926_119477616_119477748_119478251_119478294_119481935_119482011_119482781_119482873_119495525_119495591_119497774_119497904_119500535_119500634_119506643_119506808_119526734_119526851_119527927_119527968_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570206_119570389_119576514
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005132	chr1	+	237	1	Intergenic	novelGene_168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGGCCTAGCTGGGTTCC	NA	False	NA	NA	False	AAGAAA	-38	NA	119613591	119613828	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_119613600_119613800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005136	chr1	+	173	1	Intergenic	novelGene_169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTATTTCATTTAATG	NA	False	NA	NA	False	NA	NA	NA	119699521	119699694	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_119699500_119699700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005141	chr1	+	184	1	Intergenic	novelGene_170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAAAAAATACCTCCTG	NA	False	NA	NA	False	NA	NA	NA	119700181	119700365	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_119700200_119700400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005149	chr1	-	3306	2	FSM	ENSMUSG00000036975.6	ENSMUST00000037906.6	3341	2	35	0	35	0	multi-exon	FALSE	canonical	3	113	junction_1	0	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCAGCCTTAAGTTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	119840903	119835619	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_119838885_119840862
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005161	chr1	-	557	4	FSM	ENSMUSG00000026385.17	ENSMUST00000027634.13	569	4	4	8	4	2	multi-exon	FALSE	canonical	3	2709	junction_1	24.2532930181083	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTTACTCTGTTGTCT	NA	False	NA	-9	True	ATTAAA	-21	NA	120048804	120041017	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_120041264_120044115_120044179_120047624_120047743_120048674
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005169	chr1	+	504	6	FSM	ENSMUSG00000026388.16	ENSMUST00000112644.9	488	6	-18	2	-10	-2	multi-exon	FALSE	canonical	3	34	junction_1	7.2773621594641	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGTTTGATTTATCTC	NA	False	NA	13	True	AATAAA	-14	NA	120048906	120115917	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_120048948_120078332_120078478_120088335_120088387_120093864_120093903_120099130_120099213_120115770
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005189	chr1	-	2050	5	FSM	ENSMUSG00000003721.15	ENSMUST00000186915.2	674	5	-34	-1342	-7	0	multi-exon	FALSE	canonical	3	11	junction_4	81.0524521529115	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTAGTCCTTTTTATTC	NA	False	NA	-1	True	ATTAAA	-17	NA	121255482	121232081	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121255419
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005203	chr1	+	7265	24	FSM	ENSMUSG00000026339.19	ENSMUST00000036025.16	7274	24	9	0	9	0	multi-exon	FALSE	canonical	3	57	junction_5	11.149101195474	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGTTTCATTTAAGAATA	NA	False	NA	10	True	NA	NA	NA	121358786	121434189	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_121358987_121362261_121362376_121365524_121365620_121369510_121369623_121373368_121373468_121375952_121376010_121383799_121383901_121389192_121389230_121389615_121389709_121389961_121390013_121390827_121390915_121403760_121403878_121405563_121405627_121408543_121408618_121409724_121409807_121410329_121410396_121411015_121411070_121414331_121414395_121418850_121418960_121420633_121420717_121422124_121422163_121424712_121424798_121426936_121427051_121428918
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005218	chr1	-	2249	13	FSM	ENSMUSG00000001674.12	ENSMUST00000001724.12	2258	13	9	0	9	0	multi-exon	FALSE	canonical	3	390	junction_12	122.318232492135	321	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTATACCTTTCCCT	NA	False	NA	-16	True	CATAAA	-23	NA	121495709	121481563	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_121481868_121482944_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609_121493898_121495519
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005227	chr1	-	2730	12	FSM	ENSMUSG00000026341.17	ENSMUST00000178474.8	2565	12	-163	-2	-3	1	multi-exon	FALSE	canonical	3	2308	junction_6	123.717286351378	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTTTTTCTTCGTGCA	NA	False	NA	-2	True	AATAAA	-22	NA	125363447	125320640	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005236	chr1	-	2576	13	FSM	ENSMUSG00000026341.17	ENSMUST00000027579.17	2554	13	-22	0	-22	0	multi-exon	FALSE	canonical	3	364	junction_12	606.954190107366	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGGTTTTTCTTCGTGC	NA	False	NA	-3	True	AATAAA	-21	NA	125363486	125320641	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021_125363195_125363386
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005262	chr1	-	178	1	Intergenic	novelGene_171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTTAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	126225594	126225416	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_126225400_126225600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005264	chr1	+	178	1	Intergenic	novelGene_172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAAGTTAAAG	NA	False	NA	NA	False	NA	NA	NA	127651586	127651764	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_127651600_127651800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005278	chr1	+	6713	9	FSM	ENSMUSG00000026349.15	ENSMUST00000027587.15	6738	9	25	0	25	0	multi-exon	FALSE	canonical	3	399	junction_6	47.8289595851718	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGGCTGAAACATGTTT	NA	False	NA	8	True	AATAAA	-22	NA	127701925	127735798	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005302	chr1	+	4230	24	FSM	ENSMUSG00000036104.13	ENSMUST00000037649.6	4243	24	11	2	-5	-2	multi-exon	FALSE	canonical	3	104	junction_1	17.6995509005001	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTGGACTTGTGGCT	3040	False	NA	16	True	AATAAA	-13	NA	127796520	127871603	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_127796567_127796661_127796718_127801816_127801893_127816892_127817026_127818754_127818834_127829315_127829436_127831408_127831575_127837587_127837688_127843375_127843458_127845957_127846027_127847304_127847379_127852464_127852558_127853011_127853179_127855196_127855287_127855685_127855859_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865303_127865725_127865823_127865934_127866039_127866311_127866428_127866782_127866886_127870110
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005311	chr1	+	180	1	Intergenic	novelGene_173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATCCTTTTGCTAATTA	NA	False	NA	NA	False	NA	NA	NA	127842048	127842228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_127842000_127842200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005340	chr1	+	525	1	FSM	ENSMUSG00000058603.11	ENSMUST00000121497.2	414	1	-46	-65	-46	65	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCATGTCAATTCTGTC	NA	False	NA	NA	False	AATAAA	-42	NA	127966259	127966784	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_127966300_127966800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005378	chr1	+	4593	25	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_14	61.9559515345827	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031082	128165473	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128112136_128112392_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005379	chr1	+	4629	25	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	65.5311630702014	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031082	128165473	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_+_128031221_128079480_128079690_128080925_128081137_128090505_128090596_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005391	chr1	+	187	1	Intergenic	novelGene_174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAAACTTCTTTTTAA	1344	False	NA	NA	False	NA	NA	NA	128153164	128153351	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_128153200_128153400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005412	chr1	-	216	1	Intergenic	novelGene_175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTGAAACAACTATCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	128176706	128176490	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_128176500_128176700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005417	chr1	+	189	1	Intergenic	novelGene_176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAAGCAAGGCAGTGGTC	2444	False	NA	NA	False	NA	NA	NA	128200118	128200307	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_128200100_128200300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005426	chr1	-	2996	17	FSM	ENSMUSG00000026355.12	ENSMUST00000027601.11	2910	17	-70	-16	-70	16	multi-exon	FALSE	canonical	3	2842	junction_6	235.478734443261	3095	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTACTCTTGATTATTGC	NA	False	NA	-5	True	AATAAA	-33	NA	128287471	128259310	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005455	chr1	-	2235	16	FSM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	-55	-5	-46	5	multi-exon	TRUE	canonical	3	1712	junction_8	135.919976456737	697	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGTGTGACTTTATAGA	NA	False	NA	1	True	AATAAA	-19	NA	128345151	128291438	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005469	chr1	+	156	1	Intergenic	novelGene_177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATTAGGAATGTCTGTT	NA	False	NA	NA	False	NA	NA	NA	128340729	128340885	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_128340700_128340900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005498	chr1	-	2159	3	FSM	ENSMUSG00000016526.9	ENSMUST00000016670.9	3164	3	19	986	19	-986	multi-exon	FALSE	canonical	3	221	junction_1	9	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATTGTTTTCATTCTCA	256	False	NA	-3	True	ATTAAA	-19	NA	131066058	131056177	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_131057983_131063996_131064109_131065816
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005505	chr1	+	2035	15	FSM	ENSMUSG00000026427.17	ENSMUST00000068805.14	2009	15	-6	-20	-6	20	multi-exon	FALSE	canonical	3	546	junction_5	43.4650340351123	245	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGAATCGCTCTTCTGTTT	NA	False	NA	61	True	AATAAA	-42	NA	131080911	131101235	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131101040
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005524	chr1	-	187	1	Intergenic	novelGene_178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAGGCACTCTGAAAAC	9139	False	NA	NA	False	NA	NA	NA	131130178	131129991	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_131130000_131130200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005537	chr1	-	3515	22	FSM	ENSMUSG00000026425.16	ENSMUST00000186543.7	3533	22	18	0	18	0	multi-exon	TRUE	canonical	3	29	junction_1	23.367225143015	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTGCCAGATCTCTTG	NA	False	NA	0	True	AATAAA	-26	NA	131455067	131222955	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_131223278_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005545	chr1	-	4296	21	ISM	ENSMUSG00000026425.16	ENSMUST00000097588.9	8026	23	17	9967	17	0	5prime_fragment	FALSE	canonical	3	115	junction_11	8.98943824718764	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTGCCAGATCTCTTG	NA	False	NA	0	True	AATAAA	-26	NA	131455068	131222955	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr1_-_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005553	chr1	-	189	1	Intergenic	novelGene_179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGAAGTTGATAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	131258998	131258809	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_131258800_131259000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005560	chr1	+	3545	13	FSM	ENSMUSG00000042251.13	ENSMUST00000112393.9	6900	13	8	3347	8	1738	multi-exon	FALSE	canonical	3	56	junction_3	6.31741420378799	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGTATTGTGTTCTTG	NA	False	NA	3	True	AATAAA	-16	NA	131725126	131745852	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_131725325_131726333_131726421_131728831_131729065_131729463_131729551_131730038_131730173_131730457_131730578_131731789_131731866_131732324_131732387_131732630_131732710_131734636_131734709_131739772_131739942_131741628_131741729_131743724
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005582	chr1	+	158	2	Intergenic	novelGene_180	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	518	junction_1	0	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCATGATTATATTCACAT	NA	False	NA	NA	False	NA	NA	NA	131779599	131779916	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_131779648_131779806
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005603	chr1	+	6072	7	FSM	ENSMUSG00000026434.13	ENSMUST00000189946.7	2375	7	-53	-3644	-53	2	multi-exon	FALSE	canonical	3	331	junction_5	461.648284832608	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTTCGTGTGCTTCT	9229	False	NA	29	True	TATAAA	-20	NA	131838218	131864061	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857353_131857501_131858771
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005604	chr1	+	6075	7	FSM	ENSMUSG00000026434.13	ENSMUST00000062264.8	5998	7	-75	-2	-53	2	multi-exon	FALSE	canonical	3	1163	junction_5	186.902306626275	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTTCGTGTGCTTCT	9229	False	NA	29	True	TATAAA	-20	NA	131838218	131864061	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350_131857501_131858771
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005631	chr1	+	3226	5	FSM	ENSMUSG00000026435.16	ENSMUST00000177943.8	3212	5	-17	3	-17	2	multi-exon	FALSE	canonical	3	24	junction_4	4.65698400254929	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATATGTGTTTGTCTTTTC	NA	False	NA	NA	False	ATTAAA	-20	NA	131890687	131910704	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_131890791_131904455_131904851_131905150_131905937_131906485_131906752_131909028
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005638	chr1	-	202	1	Intergenic	novelGene_181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATATGCCAGGCAGTGGT	NA	False	NA	NA	False	NA	NA	NA	131913564	131913362	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_131913400_131913600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005659	chr1	-	2956	16	FSM	ENSMUSG00000026437.12	ENSMUST00000027697.12	4355	16	-18	1417	-18	932	multi-exon	FALSE	canonical	3	137	junction_4	13.6323145503616	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGAGCAGTCTCATTCA	579	False	NA	-2	True	AATATA	-23	NA	132067440	132041391	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044228_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049312_132049774_132049855_132050049_132050199_132067147
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005668	chr1	-	498	4	NNC	ENSMUSG00000101549.2	novel	359	4	NA	NA	1954	6210	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_1	10.077477638554	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCCTTCTTAATTTCGAG	NA	False	NA	2	True	AATAAA	-20	NA	132206195	132196243	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr1_-_132196405_132202453_132202560_132202761_132202875_132206077
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005674	chr1	+	2915	7	FSM	ENSMUSG00000009772.16	ENSMUST00000082125.6	3107	7	-3	195	-3	0	multi-exon	FALSE	canonical	3	25	junction_6	6.54896090146283	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTCTTGTTCACTTTGG	NA	False	NA	NA	False	ATTAAA	-24	NA	132243860	132261031	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_132244211_132252690_132252812_132255434_132255587_132255868_132255935_132257695_132257816_132258296_132258430_132259058
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005687	chr1	-	191	1	Intergenic	novelGene_182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGGGAGGTTGCTTTAA	NA	False	NA	NA	False	NA	NA	NA	132335392	132335201	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_132335200_132335400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005696	chr1	+	181	1	Intergenic	novelGene_183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAATTGGAGTGTTAAA	NA	False	NA	NA	False	NA	NA	NA	132359147	132359328	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_132359100_132359300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005700	chr1	+	173	1	Intergenic	novelGene_184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAATGTAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	132397589	132397762	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_132397600_132397800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005708	chr1	+	6491	14	Fusion	ENSMUSG00000048174.3_ENSMUSG00000026439.15	novel	3385	15	NA	NA	0	-3	intron_retention	FALSE	canonical	3	277	junction_4	39.7596328248497	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTTATGGCAGTCTAAC	NA	False	NA	3	True	AATAAA	-13	NA	132405102	132436374	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005715	chr1	+	3616	14	FSM	ENSMUSG00000026439.15	ENSMUST00000190997.7	2856	14	12	-772	12	2	multi-exon	FALSE	canonical	3	60	junction_13	83.2346081867393	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTATACATGCTTGTTT	NA	False	NA	11	True	AATAAA	-20	NA	132405116	132433399	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425860_132431501
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005729	chr1	-	3141	21	NIC	ENSMUSG00000026442.15	novel	4927	32	NA	NA	-5	-3	combination_of_known_junctions	FALSE	canonical	2	5	junction_20	5.90148286450109	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTAGCCAATTTTGTC	NA	False	NA	NA	False	AAGAAA	-3	NA	132669521	132527575	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_-_132527953_132529708_132529932_132531535_132531607_132532778_132532977_132533221_132533324_132534740_132534786_132536120_132536246_132537494_132537643_132538048_132538216_132538512_132538625_132539267_132539412_132547126_132547259_132548662_132548848_132549249_132549362_132559422_132559594_132561905_132562029_132562361_132562559_132564723_132564830_132570415_132570597_132593216_132593326_132669408
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005740	chr1	+	199	1	Intergenic	novelGene_185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATACTCCTTGATTGAAA	NA	False	NA	NA	False	NA	NA	NA	132893810	132894009	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_132893800_132894000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005783	chr1	-	174	1	Intergenic	novelGene_186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAGATTTACTTATTTTT	NA	False	NA	0	True	NA	NA	NA	132949478	132949304	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_132949300_132949500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005805	chr1	-	210	1	Intergenic	novelGene_187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGTCAGGTAGCCAAGG	8178	False	NA	NA	False	AAAAAG	-9	NA	133063585	133063375	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_133063400_133063600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005819	chr1	+	194	1	Intergenic	novelGene_188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATGACAAGACACACCTG	5327	False	NA	NA	False	NA	NA	NA	133261461	133261655	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_133261500_133261700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005826	chr1	+	200	1	Intergenic	novelGene_189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACCCTTAAATTGGGTAA	NA	False	NA	NA	False	NA	NA	NA	133266894	133267094	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_133266900_133267100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005850	chr1	-	3744	14	FSM	ENSMUSG00000070643.12	ENSMUST00000153799.8	3693	14	-51	0	-51	0	multi-exon	FALSE	canonical	3	38	junction_8	19.9582404271205	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGTGCCCTTTCTCTGCT	NA	False	NA	-8	True	AATAAA	-15	NA	133352166	133310040	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_133311663_133312194_133312412_133313203_133313348_133313731_133313829_133313922_133314033_133314503_133314667_133314821_133314905_133316186_133316302_133316666_133316736_133317061_133317235_133318296_133318384_133318466_133318579_133320810_133321010_133351613
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005873	chr1	-	511	5	FSM	ENSMUSG00000090553.9	ENSMUST00000166915.8	503	5	-8	0	-8	0	multi-exon	FALSE	canonical	3	3763	junction_3	447.106461035848	237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTTCATTCTGGTGGC	NA	False	NA	-9	True	AATAAA	-30	NA	133538037	133531608	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_133531815_133534238_133534318_133536634_133536698_133537455_133537483_133537901
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005884	chr1	-	4439	18	NIC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_17	104.361959952471	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTATCATTATAACTCA	NA	False	NA	1	True	AATAAA	-21	NA	133589118	133547599	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588993
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005886	chr1	-	4404	17	FSM	ENSMUSG00000116275.2	ENSMUST00000027736.13	4395	17	0	-9	0	9	multi-exon	FALSE	canonical	3	37	junction_16	98.6493157604248	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTATCATTATAACTCA	NA	False	NA	1	True	AATAAA	-21	NA	133589118	133547599	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133588974
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005899	chr1	-	4379	17	NIC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	3	25	junction_16	101.178060863015	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTAGTTCTTATCATTAT	NA	False	NA	-5	True	AATAAA	-15	NA	133589118	133547605	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133588993
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005903	chr1	-	4452	18	FSM	ENSMUSG00000102976.7	ENSMUST00000191896.6	4396	18	-62	6	0	-6	multi-exon	FALSE	canonical	3	129	junction_16	96.2094744595279	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTAGTTCTTATCATTAT	NA	False	NA	-5	True	AATAAA	-15	NA	133589118	133547605	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588974
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005905	chr1	-	5739	17	NIC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	4	-6	intron_retention	FALSE	canonical	3	78	junction_16	90.1805264109165	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTAGTTCTTATCATTAT	NA	False	NA	-5	True	AATAAA	-15	NA	133589112	133547605	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133583137_133588993
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005907	chr1	-	5764	17	NIC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	0	3	intron_retention	FALSE	canonical	3	133	junction_16	79.3516697996961	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTAGTTCTTATCATTAT	NA	False	NA	-5	True	AATAAA	-15	NA	133589118	133547605	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133583137_133588974
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005948	chr1	+	4109	1	Intergenic	novelGene_190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	133907795	133911904	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_133907800_133911900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005954	chr1	-	2591	2	FSM	ENSMUSG00000020423.7	ENSMUST00000020692.7	2743	2	-1	153	-1	-153	multi-exon	FALSE	canonical	3	77	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGAAGGTGGAATTCCAT	NA	False	NA	-3	True	AATAAA	-24	NA	134006859	134003060	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_134005442_134006649
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000005984	chr1	-	3115	8	NNC	ENSMUSG00000042305.13	novel	3149	8	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	245.748087376036	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	134289686	134273834	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134282580_134283297_134283452_134288494_134288663_134289271_134289362_134289499
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006000	chr1	+	197	1	Intergenic	novelGene_191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1294	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATTAAGCCTGATGTC	8103	False	NA	NA	False	NA	NA	NA	134284708	134284905	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_134284700_134284900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006013	chr1	+	1643	9	FSM	ENSMUSG00000026456.19	ENSMUST00000027726.14	1837	9	194	0	-20	0	multi-exon	TRUE	canonical	3	291	junction_1	53.3666562565053	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGTCGTCGTGTCTGGG	8165	False	NA	43	True	AATAAA	-31	NA	134333712	134339478	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134337338_134337425_134338230_134338331_134338644
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006038	chr1	+	3125	8	FSM	ENSMUSG00000026457.15	ENSMUST00000027727.15	3123	8	-2	0	-2	0	multi-exon	FALSE	canonical	3	879	junction_4	75.4485904170407	428	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTCTTGGTTCCATTC	NA	False	NA	8	True	NA	NA	NA	134343113	134361089	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006056	chr1	-	184	1	Intergenic	novelGene_192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAGGGATGGTCAAAAT	NA	False	NA	NA	False	NA	NA	NA	134369563	134369379	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_134369400_134369600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006065	chr1	+	3280	12	FSM	ENSMUSG00000026455.15	ENSMUST00000027725.11	3408	12	-15	143	-15	2	multi-exon	TRUE	canonical	3	104	junction_1	24.9889231659096	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGAGAATTTGTGGGTA	NA	False	NA	19	True	ATTAAA	-20	NA	134383253	134418613	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_134383404_134386203_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006075	chr1	+	3303	12	FSM	ENSMUSG00000026455.15	ENSMUST00000116528.2	3277	12	-24	-2	0	2	multi-exon	FALSE	canonical	3	46	junction_1	38.3780670833987	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGAGAATTTGTGGGTA	NA	False	NA	19	True	ATTAAA	-20	NA	134383268	134418613	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_134383404_134386165_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006116	chr1	+	187	1	Intergenic	novelGene_193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTGTCTGTAATTATAG	NA	False	NA	NA	False	NA	NA	NA	134885875	134886062	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_134885900_134886100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006128	chr1	+	927	7	NNC	ENSMUSG00000026429.10	novel	1116	7	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	3	165	junction_1	233.142779333943	24	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGTTTATATGAAACG	NA	False	NA	15	True	AATAAA	-17	NA	134890314	134901900	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr1_+_134890348_134895464_134895637_134896978_134897049_134898987_134899094_134899638_134899738_134899843_134899928_134901537
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006145	chr1	+	189	1	Intergenic	novelGene_194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATAGCAGCAGTCCAGG	NA	False	NA	NA	False	NA	NA	NA	135043535	135043724	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_135043500_135043700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006157	chr1	+	190	1	Intergenic	novelGene_195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATGAGTTCCAAT	NA	False	NA	NA	False	NA	NA	NA	135099032	135099222	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_135099000_135099200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006162	chr1	+	187	1	Intergenic	novelGene_196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTTAAAAACATTTTAAAAG	NA	False	NA	NA	False	NA	NA	NA	135103653	135103840	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_135103700_135103800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006171	chr1	+	199	1	Intergenic	novelGene_197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGAATCTTTTTTTTC	1179	False	NA	NA	False	NA	NA	NA	135156750	135156949	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_135156800_135156900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006177	chr1	+	1377	1	FSM	ENSMUSG00000079139.5	ENSMUST00000110798.5	1231	1	42	-188	42	188	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTCTTATTACCTGGG	4203	False	NA	NA	False	AATAAA	-25	NA	135159774	135161151	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_135159800_135161200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006184	chr1	-	2013	9	FSM	ENSMUSG00000003051.14	ENSMUST00000003135.14	2095	9	84	-2	-46	2	multi-exon	FALSE	canonical	3	306	junction_7	111.074791807142	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGCTCTCTGTGTACTG	NA	False	NA	-4	True	AATAAA	-29	NA	135186222	135181310	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135185025_135185352_135185521_135186086
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006196	chr1	-	1952	9	FSM	ENSMUSG00000003051.14	ENSMUST00000185752.2	1901	9	-46	-5	-46	1	multi-exon	FALSE	canonical	3	367	junction_7	94.095363860288	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGCTCTCTGTGTACT	NA	False	NA	-5	True	AATAAA	-28	NA	135186222	135181311	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135184965_135185352_135185521_135186086
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006204	chr1	-	2287	11	FSM	ENSMUSG00000041926.16	ENSMUST00000077340.14	2288	11	4	-3	4	3	multi-exon	FALSE	canonical	3	249	junction_8	16.9602476397015	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGAGTTATAGAATGACT	NA	False	NA	-11	True	AATAAA	-25	NA	135211818	135190446	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_135190868_135191790_135191934_135192920_135193146_135194607_135194717_135194907_135195021_135195820_135195935_135199266_135199503_135200099_135200217_135205126_135205276_135206504_135206646_135211299
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006231	chr1	-	177	1	Intergenic	novelGene_198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAGTGGACAGAG	6919	False	NA	NA	False	NA	NA	NA	135271025	135270848	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_135270800_135271000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006239	chr1	-	1002	3	FSM	ENSMUSG00000041889.8	ENSMUST00000159918.2	1404	3	6	396	6	-396	multi-exon	FALSE	canonical	3	26	junction_2	3.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGAATCACTGGCCCC	NA	False	NA	-7	True	ATTAAA	-20	NA	135301182	135299193	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_135299735_135299934_135300103_135300889
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006250	chr1	-	195	1	Intergenic	novelGene_199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAATCCCACAAATAA	NA	False	NA	NA	False	NA	NA	NA	135611115	135610920	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_135610900_135611100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006252	chr1	+	184	1	Intergenic	novelGene_200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCGTATGCAAGAGGATT	NA	False	NA	NA	False	NA	NA	NA	135631041	135631225	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_135631000_135631200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006256	chr1	-	188	1	Intergenic	novelGene_201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATATTTTGTATATGT	1685	False	NA	NA	False	NA	NA	NA	135632360	135632172	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_135632200_135632400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006266	chr1	+	1790	6	FSM	ENSMUSG00000026421.15	ENSMUST00000027677.8	1823	6	33	0	33	0	multi-exon	FALSE	canonical	3	392	junction_1	35.0884596413123	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTTTCCTGTCTGTCT	NA	False	NA	24	True	AATAAA	-17	NA	135656917	135679970	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_135657013_135667137_135667251_135672996_135673166_135674457_135674588_135678302_135678397_135678781
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006282	chr1	-	179	1	Intergenic	novelGene_202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAATTCCAAAAAAAATT	NA	False	NA	0	True	NA	NA	NA	135733871	135733692	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_135733700_135733900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006293	chr1	+	2499	10	FSM	ENSMUSG00000041782.15	ENSMUST00000038760.10	2993	10	120	374	120	261	multi-exon	FALSE	canonical	3	102	junction_3	17.5119007154183	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGGTAATGTCGATGG	5738	False	NA	19	True	NA	NA	NA	135746455	135760706	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_135746755_135753492_135753631_135754901_135755785_135756452_135756558_135757426_135757471_135758637_135758711_135758820_135758959_135759262_135759350_135759611_135759687_135760049
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006298	chr1	-	184	1	Intergenic	novelGene_203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGCCGGGCGTGGTAGC	5876	False	NA	NA	False	NA	NA	NA	135807285	135807101	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_135807100_135807300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006308	chr1	+	1452	6	FSM	ENSMUSG00000026411.18	ENSMUST00000063719.15	1806	6	42	312	42	250	multi-exon	FALSE	canonical	3	317	junction_1	45.0759359303831	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCAGATCTCAAGGGAGA	NA	False	NA	24	True	ATTAAA	-19	NA	135945746	135962768	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_135945801_135946243_135946346_135947395_135947488_135952355_135952465_135955134_135955267_135961805
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006326	chr1	+	180	1	Intergenic	novelGene_204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATGCAGTACAGG	NA	False	NA	NA	False	NA	NA	NA	136130291	136130471	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_136130300_136130500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006355	chr1	+	2139	8	FSM	ENSMUSG00000026404.13	ENSMUST00000027655.8	2166	8	25	2	25	-2	multi-exon	FALSE	canonical	3	59	junction_1	8.75750407085377	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGTTATTTATTTCAGTC	NA	False	NA	8	True	AATAAA	-14	NA	136343033	136367894	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_136343162_136344319_136345135_136347147_136347316_136352532_136352623_136360049_136360302_136361450_136361604_136362243_136362373_136367490
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006358	chr1	-	174	1	Intergenic	novelGene_205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAACAAAAGTATATCTGC	NA	False	NA	NA	False	NA	NA	NA	136369964	136369790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_136369800_136370000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006365	chr1	+	3756	21	NIC	ENSMUSG00000041498.14	novel	8943	29	NA	NA	25	7565	intron_retention	FALSE	canonical	3	49	junction_13	8.08006806902021	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTATGTGTGGTTTGCCT	NA	False	NA	NA	False	ATTAAA	-28	NA	136394105	136431219	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_+_136394137_136395585_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006376	chr1	+	214	1	Intergenic	novelGene_206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAATGTCATCTATACATA	NA	False	NA	NA	False	NA	NA	NA	136486244	136486458	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_136486200_136486500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006411	chr1	-	180	1	Intergenic	novelGene_207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAGACCCAGAAATGC	NA	False	NA	NA	False	NA	NA	NA	136655293	136655113	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_136655100_136655300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006419	chr1	-	160	1	Intergenic	novelGene_208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAATCAGACATGTAAA	NA	False	NA	NA	False	NA	NA	NA	136918639	136918479	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_136918500_136918600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006428	chr1	+	185	1	Intergenic	novelGene_209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAGAAGTAAATAA	2145	False	NA	NA	False	NA	NA	NA	136951844	136952029	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_136951800_136952000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006439	chr1	-	180	1	Intergenic	novelGene_210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAGAGAAAACAATC	NA	False	NA	NA	False	NA	NA	NA	137262763	137262583	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_137262600_137262800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006441	chr1	-	4304	10	FSM	ENSMUSG00000026393.11	ENSMUST00000186017.7	5258	10	-8	962	-8	0	multi-exon	TRUE	canonical	3	136	junction_1	7.19739321808962	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGGATGATCATCGTCT	NA	False	NA	0	True	AATAAA	-18	NA	138547495	138411574	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547289
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006452	chr1	-	220	1	Intergenic	novelGene_211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAGTAAAACTTGA	NA	False	NA	NA	False	NA	NA	NA	138778010	138777790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_138777800_138778000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006469	chr1	+	197	1	Intergenic	novelGene_212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTCACAAGTAAGAGGGAA	NA	False	NA	NA	False	NA	NA	NA	139338843	139339040	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_139338800_139339000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006477	chr1	+	9878	28	FSM	ENSMUSG00000033952.15	ENSMUST00000053364.12	9867	28	-11	0	-8	0	multi-exon	TRUE	canonical	3	70	junction_14	22.9621266275417	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTGTGTGTGGTTT	NA	False	NA	15	True	NA	NA	NA	139382501	139421829	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_139382943_139384477_139384622_139384774_139386183_139389163_139389269_139389509_139389657_139390793_139391040_139391973_139392042_139395655_139395798_139396355_139396487_139397073_139397250_139398175_139398322_139398409_139398496_139399308_139399531_139401275_139401484_139401575_139401719_139401982_139402112_139404445_139404641_139405083_139408879_139410075_139410243_139413437_139413526_139414944_139415155_139416125_139416276_139417383_139417576_139417701_139417895_139418036_139418192_139419255_139419433_139420444_139420615_139421385
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006484	chr1	-	186	1	Intergenic	novelGene_213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGATAGATACAGAGA	8278	False	NA	7	True	NA	NA	NA	139486412	139486226	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_139486200_139486400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006506	chr1	+	210	1	Intergenic	novelGene_214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATTAGACATGCACTTGT	NA	False	NA	NA	False	NA	NA	NA	143555805	143556015	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_143555800_143556000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006510	chr1	-	176	1	Intergenic	novelGene_215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCAGAGTGAGGCGGGGG	NA	False	NA	NA	False	NA	NA	NA	143608609	143608433	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_143608400_143608600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006537	chr1	+	1332	11	FSM	ENSMUSG00000018189.13	ENSMUST00000189936.7	1696	11	0	364	0	0	multi-exon	FALSE	canonical	3	615	junction_8	216.947090323885	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTCCATTCTTCAATTC	NA	False	NA	25	True	NA	NA	NA	143653009	143682679	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675658_143675773_143677872_143677972_143682421
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006539	chr1	+	1338	11	FSM	ENSMUSG00000018189.13	ENSMUST00000018333.13	1845	11	-9	516	0	9	multi-exon	FALSE	canonical	3	576	junction_8	227.497274708951	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCAATTCTGGATCTGG	NA	False	NA	34	True	NA	NA	NA	143653009	143682688	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675661_143675773_143677872_143677972_143682421
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006561	chr1	+	197	1	Intergenic	novelGene_216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGCTCTTGCAGGGGAC	NA	False	NA	NA	False	NA	NA	NA	143711886	143712083	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_143711900_143712100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006568	chr1	-	2943	14	FSM	ENSMUSG00000006010.15	ENSMUST00000111913.9	3273	14	330	0	-2	0	multi-exon	FALSE	canonical	3	106	junction_9	14.7515920312223	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGGAATTTTAAAATAGGA	963	False	NA	NA	False	AATAAA	-21	NA	150268501	150237055	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264409_150265986_150266108_150268440
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006580	chr1	-	2899	14	NIC	ENSMUSG00000006010.15	novel	3273	14	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	32	junction_12	29.9368170945323	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAATGTGGAATTTTAAA	963	False	NA	NA	False	AATAAA	-15	NA	150268501	150237061	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264371_150265986_150266108_150268440
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006590	chr1	+	7591	52	FSM	ENSMUSG00000006005.19	ENSMUST00000124973.9	7430	52	-41	-120	-41	0	multi-exon	TRUE	canonical	3	82	junction_1	100.054291298415	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTTTTCTTCATTTCA	NA	False	NA	25	True	AATAAA	-24	NA	150268547	150325686	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_150268765_150269106_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006592	chr1	+	6485	42	ISM	ENSMUSG00000006005.19	ENSMUST00000124973.9	7430	52	-37	9500	-37	0	5prime_fragment	FALSE	canonical	3	82	junction_1	100.513926275774	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGTTTGGCTTGC	NA	False	NA	18	True	AATAAA	-19	NA	150268551	150316066	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr1_+_150268765_150269106_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006618	chr1	+	6328	41	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	50	9620	50	0	5prime_fragment	FALSE	canonical	3	414	junction_6	68.8321826982117	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGTTTGGCTTGC	NA	False	NA	18	True	AATAAA	-19	NA	150269050	150316066	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006630	chr1	+	185	1	Intergenic	novelGene_217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAACAATGTATGCATGCA	NA	False	NA	NA	False	NA	NA	NA	150812170	150812355	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_150812200_150812400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006635	chr1	+	3567	15	FSM	ENSMUSG00000023150.15	ENSMUST00000023918.13	3511	15	-31	-25	-31	25	multi-exon	TRUE	canonical	3	1145	junction_2	98.7764172879585	790	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTCACTCAGTTCATT	NA	False	NA	42	True	AGTAAA	-30	NA	151220196	151240198	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006692	chr1	+	2643	15	FSM	ENSMUSG00000053286.12	ENSMUST00000065625.12	2749	15	106	0	0	0	multi-exon	FALSE	canonical	3	148	junction_10	24.5323609686038	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGACTGGGCTCGCGT	NA	False	NA	15	True	AATAAA	-16	NA	151304398	151333912	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_151304854_151309544_151309656_151311478_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151324004_151324249_151325650_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006695	chr1	+	2461	15	NIC	ENSMUSG00000053286.12	novel	2749	15	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	47.2939138337512	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGACTGGGCTCGCGT	NA	False	NA	15	True	AATAAA	-16	NA	151304408	151333912	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_+_151304682_151309544_151309656_151311478_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151324004_151324249_151325650_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006699	chr1	-	3202	7	FSM	ENSMUSG00000026484.14	ENSMUST00000076110.11	3160	7	-35	-7	-35	6	multi-exon	FALSE	canonical	3	460	junction_6	52.4404424085076	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGTGTACTCCTTTGC	NA	False	NA	1	True	CATAAA	-26	NA	151376741	151345149	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151376469
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006713	chr1	+	153	1	Intergenic	novelGene_218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATAAATAAATGTCACT	2238	False	NA	NA	False	NA	NA	NA	151365300	151365453	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_151365300_151365500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006717	chr1	+	192	1	Intergenic	novelGene_219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTTCAAGTCTCTGAAAA	NA	False	NA	NA	False	NA	NA	NA	151415352	151415544	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_151415400_151415500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006722	chr1	+	6787	14	FSM	ENSMUSG00000026483.14	ENSMUST00000148810.8	6531	14	-256	0	-69	0	multi-exon	FALSE	canonical	3	182	junction_12	16.2156327524439	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGTTGCTCATTTATC	NA	False	NA	11	True	AATAAA	-19	NA	151446867	151597690	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006733	chr1	-	222	1	Intergenic	novelGene_220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCACACCTTTATAACTT	1818	False	NA	NA	False	NA	NA	NA	151518957	151518735	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_151518700_151519000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006739	chr1	+	6633	20	FSM	ENSMUSG00000043019.13	ENSMUST00000059498.12	6327	20	-25	-281	-22	281	multi-exon	TRUE	canonical	3	102	junction_16	20.6122358303988	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTTCATTAGTCCTTTT	NA	False	NA	NA	False	AATAAA	-34	NA	151631099	151698083	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680415_151680571_151681600_151681755_151683116_151683309_151683954_151684121_151687269_151687456_151694060
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006761	chr1	+	196	1	Intergenic	novelGene_221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAGCAATGGAAAGTCCC	NA	False	NA	NA	False	NA	NA	NA	152186580	152186776	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_152186600_152186800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006774	chr1	+	172	1	Intergenic	novelGene_222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATAGGTTTTGAAA	NA	False	NA	NA	False	NA	NA	NA	152661335	152661507	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_152661300_152661500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006783	chr1	-	5781	22	NIC	ENSMUSG00000042772.16	novel	5767	22	NA	NA	-128	0	combination_of_known_junctions	FALSE	canonical	3	176	junction_5	39.6466250175655	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778525	152712745	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006787	chr1	-	5919	22	FSM	ENSMUSG00000042772.16	ENSMUST00000073441.13	5767	22	-152	0	-128	0	multi-exon	FALSE	canonical	3	75	junction_8	55.4427244244903	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778525	152712745	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006792	chr1	-	5911	23	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	-121	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_21	74.1391504966413	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778518	152712745	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791_152753929_152778259
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006806	chr1	-	5812	23	FSM	ENSMUSG00000042772.16	ENSMUST00000111836.4	3928	23	-9	-1875	-9	0	multi-exon	FALSE	canonical	3	60	junction_6	70.0173089579927	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778406	152712745	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006823	chr1	+	199	1	Antisense	novelGene_ENSMUSG00000099969.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAGACCAGAGACAAGC	NA	False	NA	NA	False	NA	NA	NA	152965077	152965276	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr1_+_152965100_152965300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006829	chr1	+	4137	5	ISM	ENSMUSG00000042751.15	ENSMUST00000043313.15	4626	11	135343	0	-3134	0	3prime_fragment	FALSE	canonical	3	59	junction_1	77.8985718739439	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGAGTCTTGTGTCTTTGT	NA	False	NA	13	True	AATAAA	-14	NA	152966091	152995007	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr1_+_152966288_152969782_152969860_152987887_152987990_152988125_152988194_152991313
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006861	chr1	-	193	1	Intergenic	novelGene_223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAAACTATTGTTAGTG	NA	False	NA	NA	False	AATAAA	-13	NA	153025918	153025725	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_153025700_153025900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006874	chr1	-	7770	28	FSM	ENSMUSG00000026478.15	ENSMUST00000027752.15	7622	28	-148	0	-148	0	multi-exon	TRUE	canonical	3	518	junction_2	111.881330429904	237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGTGTGGCCTAAATG	NA	False	NA	-1	True	AATAAA	-24	NA	153208680	153094667	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006886	chr1	-	190	1	Intergenic	novelGene_224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATGCTTGTATCAAAAT	NA	False	NA	NA	False	NA	NA	NA	153214186	153213996	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_153214000_153214200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006892	chr1	+	177	1	Intergenic	novelGene_225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAGCAAATGAAGAA	NA	False	NA	NA	False	NA	NA	NA	153287687	153287864	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_153287700_153287900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006898	chr1	+	178	1	Intergenic	novelGene_226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAGCAAATGAAGA	NA	False	NA	NA	False	NA	NA	NA	153292359	153292537	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_153292400_153292500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006909	chr1	+	195	1	Intergenic	novelGene_227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATAAAATGTAGTGTACG	NA	False	NA	NA	False	NA	NA	NA	153326078	153326273	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_153326100_153326300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006924	chr1	-	4631	28	FSM	ENSMUSG00000042699.12	ENSMUST00000042141.12	4616	28	-17	2	-17	-2	multi-exon	FALSE	canonical	3	83	junction_24	29.9642219210858	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGTGTCATTGATGTT	NA	False	NA	-3	True	AATAAA	-16	NA	153363423	153331505	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347971_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611_153354728_153356877_153356996_153358487_153358629_153359485_153359619_153363278
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006925	chr1	-	4601	28	FSM	ENSMUSG00000042699.12	ENSMUST00000186380.7	4561	28	-42	2	1	-2	multi-exon	TRUE	canonical	3	12	junction_24	37.4089841985242	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGTGTCATTGATGTT	NA	False	NA	-3	True	AATAAA	-16	NA	153363396	153331505	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347971_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611_153354725_153356877_153356996_153358487_153358629_153359485_153359619_153363278
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006934	chr1	+	212	1	Intergenic	novelGene_228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGGTCACAGGTGTGC	NA	False	NA	NA	False	NA	NA	NA	153372937	153373149	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_153372900_153373100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006940	chr1	-	230	1	Intergenic	novelGene_229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGGCTCATGGGTCCAG	NA	False	NA	NA	False	NA	NA	NA	153376814	153376584	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_153376600_153376800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006946	chr1	-	1427	12	FSM	ENSMUSG00000042684.9	ENSMUST00000041874.9	1735	12	311	-3	-23	3	multi-exon	FALSE	canonical	3	88	junction_4	13.2309429459759	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGTCTTAATCTTGTT	NA	False	NA	-13	True	AATAAA	-23	NA	153425480	153378757	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_153379304_153384857_153384898_153388291_153388377_153390985_153391033_153391147_153391297_153394628_153394722_153400092_153400169_153403810_153403869_153411617_153411706_153413173_153413248_153421008_153421093_153425393
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006958	chr1	-	203	1	Intergenic	novelGene_230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAAGACAGTGACAGTGT	NA	False	NA	2	True	NA	NA	NA	153385459	153385256	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_153385300_153385500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006971	chr1	-	179	1	Intergenic	novelGene_231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAAATCCACGC	6305	False	NA	NA	False	NA	NA	NA	153401482	153401303	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_153401300_153401500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006978	chr1	+	216	1	Intergenic	novelGene_232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTCTTCTAGATAGTTT	864	False	NA	NA	False	NA	NA	NA	153741401	153741617	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_153741400_153741600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006991	chr1	+	1358	7	FSM	ENSMUSG00000026473.17	ENSMUST00000086199.12	2792	7	0	1434	0	107	multi-exon	FALSE	canonical	3	76	junction_3	27.7213315376845	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAATCTTGCTTTTGTTGG	NA	False	NA	26	True	NA	NA	NA	153775689	153784035	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_153775806_153778679_153778859_153780282_153780445_153782094_153782242_153782765_153782894_153783031_153783232_153783609
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000006996	chr1	+	205	1	Intergenic	novelGene_233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGCAAACTGGAAAATCA	NA	False	NA	NA	False	AAAACA	-7	NA	153971688	153971893	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_153971700_153971900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007002	chr1	-	183	1	Intergenic	novelGene_234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAATAAAGAGAAGCC	NA	False	NA	NA	False	NA	NA	NA	154030850	154030667	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_154030700_154030800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007007	chr1	+	178	1	Intergenic	novelGene_235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAACTGTCAATTCA	NA	False	NA	NA	False	NA	NA	NA	154888594	154888772	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_154888600_154888800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007017	chr1	+	994	4	FSM	ENSMUSG00000033701.14	ENSMUST00000080138.13	993	4	-1	0	-1	0	multi-exon	FALSE	canonical	3	223	junction_3	63.2525800966956	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTT	NA	False	NA	15	True	NA	NA	NA	155433864	155448034	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_155434606_155440402_155440468_155443330_155443428_155447943
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007020	chr1	+	1497	8	FSM	ENSMUSG00000033701.14	ENSMUST00000035560.9	5592	8	-2	4097	0	138	multi-exon	TRUE	canonical	3	134	junction_7	98.5478232605254	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCGACGTCTCAGCAACTC	NA	False	NA	29	True	AATAAA	-21	NA	155433865	155562979	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_155434606_155440402_155440468_155443330_155443428_155477199_155477283_155491612_155491719_155500614_155500705_155552949_155552981_155562694
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007038	chr1	+	174	1	Intergenic	novelGene_236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAATTATTGTATGTGTG	NA	False	NA	NA	False	NA	NA	NA	155444501	155444675	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_155444500_155444700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007061	chr1	+	201	1	Intergenic	novelGene_237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGTGTATTTGTAAAGT	NA	False	NA	8	True	NA	NA	NA	155899491	155899692	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_155899500_155899700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007075	chr1	+	2491	3	FSM	ENSMUSG00000050565.17	ENSMUST00000111754.9	2491	3	1	-1	1	1	multi-exon	FALSE	canonical	3	72	junction_1	87	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCAGGTTTTATTGTTT	NA	False	NA	4	True	AATAAA	-16	NA	155911472	155929276	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_155911667_155916820_155916881_155927039
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007077	chr1	+	2662	3	NIC	ENSMUSG00000050565.17	novel	2491	3	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	105	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCAGGTTTTATTGTTT	NA	False	NA	4	True	AATAAA	-16	NA	155911472	155929276	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_+_155911838_155916820_155916881_155927039
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007090	chr1	+	2360	2	FSM	ENSMUSG00000050565.17	ENSMUST00000065648.15	2529	2	-36	205	-9	2	multi-exon	FALSE	canonical	3	145	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCAGGTTTTATTGTTTT	NA	False	NA	5	True	AATAAA	-17	NA	155916626	155929277	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_155916749_155927039
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007110	chr1	+	190	1	Intergenic	novelGene_238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACAACCAAGCCAAGCAGG	NA	False	NA	NA	False	NA	NA	NA	156110613	156110803	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_156110600_156110800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007118	chr1	+	210	1	Intergenic	novelGene_239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGGTCAGCTGAGACA	NA	False	NA	NA	False	NA	NA	NA	156163839	156164049	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_156163800_156164000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007123	chr1	+	494	1	FSM	ENSMUSG00000078193.3	ENSMUST00000102782.4	445	1	-1	-48	-1	48	mono-exon	FALSE	NA	NA	NA	NA	NA	2505	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGACAAAAACAGGAGACAG	NA	False	NA	NA	False	NA	NA	NA	156193608	156194102	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_156193600_156194100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007130	chr1	+	239	1	Intergenic	novelGene_240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTTTTATTAGATATT	9022	False	NA	NA	False	AATAAA	-13	NA	156222171	156222410	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_156222200_156222400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007150	chr1	+	360	1	Intergenic	novelGene_241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATAATAAATCTTTTTTT	4864	False	NA	NA	False	NA	NA	NA	156370923	156371283	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_156370900_156371300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007151	chr1	-	215	1	Intergenic	novelGene_242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAATGACTTTGATGGAGA	6847	False	NA	NA	False	NA	NA	NA	156424068	156423853	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_156423900_156424100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007162	chr1	-	3267	6	FSM	ENSMUSG00000060519.12	ENSMUST00000079625.11	3285	6	18	0	-3	0	multi-exon	FALSE	canonical	3	42	junction_5	7.96492310069595	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGATGGTTCTTCCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	156501908	156481186	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_156483514_156484041_156484167_156494168_156494348_156496940_156497207_156501099_156501217_156501655
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007165	chr1	+	179	1	Intergenic	novelGene_243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTGTTTATTTGTTT	2959	False	NA	NA	False	NA	NA	NA	156503364	156503543	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_156503400_156503500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007187	chr1	+	221	1	Intergenic	novelGene_244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAGTGTTAGCCGGGCGT	NA	False	NA	NA	False	ATTAAA	-11	NA	156540055	156540276	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_156540100_156540300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007196	chr1	-	184	1	Intergenic	novelGene_245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGAAATGCTAATTTCTG	NA	False	NA	NA	False	NA	NA	NA	156571224	156571040	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_156571000_156571200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007226	chr1	+	226	1	Intergenic	novelGene_246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	314	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACCAATCATGAAGGCAAAC	NA	False	NA	NA	False	AAAAAG	-28	NA	157052863	157053089	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_157052900_157053100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007239	chr1	+	840	3	FSM	ENSMUSG00000049881.14	ENSMUST00000061537.12	1194	3	357	-3	69	3	multi-exon	FALSE	canonical	3	989	junction_1	26.5	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCCCAGTGTCTTCCTG	NA	False	NA	38	True	AATAAA	-20	NA	157240278	157247809	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_157240696_157241313_157241366_157247438
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007247	chr1	+	215	1	Intergenic	novelGene_247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGACCAATCCCTGAACCA	NA	False	NA	NA	False	NA	NA	NA	157254200	157254415	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_157254200_157254400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007251	chr1	+	1627	10	FSM	ENSMUSG00000033488.12	ENSMUST00000046743.11	1618	10	-7	-2	-4	2	multi-exon	FALSE	canonical	3	36	junction_7	9.08125188520113	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	157286142	157316632	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_157286216_157286313_157286423_157289522_157289620_157291978_157292038_157292534_157292601_157293281_157293392_157294735_157294818_157298185_157298368_157299757_157299987_157316012
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007264	chr1	+	3062	20	NIC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-146	346	combination_of_known_junctions	TRUE	canonical	3	166	junction_4	54.1975457121338	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTGGTGAGTAATTTTA	NA	False	NA	NA	False	AAGAAA	-3	NA	159059743	159173016	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076837_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007273	chr1	+	3063	20	FSM	ENSMUSG00000040782.13	ENSMUST00000076894.11	5116	20	-141	2194	-135	346	multi-exon	FALSE	canonical	3	188	junction_4	50.8633495988022	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTGGTGAGTAATTTTA	NA	False	NA	NA	False	AAGAAA	-3	NA	159059754	159173016	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007287	chr1	-	177	1	Intergenic	novelGene_248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATGTGGTGTAACT	NA	False	NA	NA	False	NA	NA	NA	159118350	159118173	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_159118200_159118400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007290	chr1	+	395	1	Intergenic	novelGene_249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTGGTTGCCTGTAGAA	NA	False	NA	6	True	AATAAA	-32	NA	159121376	159121771	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_159121400_159121800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007310	chr1	-	1566	6	FSM	ENSMUSG00000014226.11	ENSMUST00000014370.11	2098	6	-17	549	-17	-549	multi-exon	FALSE	canonical	3	4235	junction_5	193.777810907235	518	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCAATCTGTTTTGAG	7279	False	NA	0	True	AATAAA	-25	NA	160040462	160030485	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_160031294_160032537_160032636_160033665_160033766_160034182_160034280_160035948_160036166_160040216
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007322	chr1	+	199	1	Intergenic	novelGene_250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTATTAAACTATCTCAAG	1429	False	NA	NA	False	NA	NA	NA	160046339	160046538	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_160046300_160046500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007326	chr1	+	191	1	Intergenic	novelGene_251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCATAAGGGCCGTATGG	NA	False	NA	NA	False	NA	NA	NA	160187900	160188091	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_160187900_160188100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007331	chr1	+	165	1	Intergenic	novelGene_252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGTGGACTCTGGCTGC	NA	False	NA	18	True	NA	NA	NA	160712191	160712356	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_160712200_160712400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007340	chr1	-	220	1	Intergenic	novelGene_253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAATTGCAAAGTTATTT	NA	False	NA	NA	False	AAAAAG	-15	NA	160750456	160750236	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_160750200_160750500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007349	chr1	+	503	12	FSM	ENSMUSG00000053332.14	ENSMUST00000162558.8	502	12	1	-2	1	0	multi-exon	TRUE	canonical	3	1206	junction_7	1656.43137771865	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864693_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007351	chr1	+	1630	7	NIC	ENSMUSG00000053332.14	novel	793	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	3576	junction_1	865.328967631514	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160865118_160865564_160865608_160865794_160865843_160866026
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007352	chr1	+	348	8	FSM	ENSMUSG00000053332.14	ENSMUST00000159663.8	346	8	-2	0	1	0	multi-exon	FALSE	canonical	3	131	junction_6	1912.24889508	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160865794_160865843_160866026
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007356	chr1	+	1823	6	NIC	ENSMUSG00000053332.14	novel	1614	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	3576	junction_1	897.552984508436	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_+_160862765_160863321_160863375_160863552_160865118_160865564_160865608_160865794_160865843_160866026
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007359	chr1	+	463	11	FSM	ENSMUSG00000053332.14	ENSMUST00000159706.8	557	11	97	-3	1	1	multi-exon	FALSE	canonical	3	3085	junction_7	1053.46856146731	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGTGTGCATTTTGTT	NA	False	NA	23	True	ATTAAA	-19	NA	160862733	160866110	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007376	chr1	+	3192	2	FSM	ENSMUSG00000064816.3_ENSMUSG00000064440.3_ENSMUSG00000065160.3_ENSMUSG00000053332.14	ENSMUST00000159037.2	636	2	-2554	-2	1	0	multi-exon	FALSE	canonical	3	4541	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_160865843_160866026
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007381	chr1	+	3376	1	FSM	ENSMUSG00000065160.3	ENSMUST00000083226.3	84	1	-2192	-1100	-2192	1100	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_160862700_160866100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007384	chr1	+	896	10	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	-1	0	intron_retention	FALSE	canonical	3	3085	junction_6	967.274955483792	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862734	160866109	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007391	chr1	+	1633	7	FSM	ENSMUSG00000053332.14	ENSMUST00000162163.8	1614	7	-19	0	-1	0	multi-exon	FALSE	canonical	3	3085	junction_3	1089.57866474462	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862734	160866109	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_160862765_160863321_160863375_160863552_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007401	chr1	+	423	10	NIC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	38	junction_3	1766.41595705353	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007402	chr1	+	282	6	NIC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	36	junction_4	2195.84234406753	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160865794_160865843_160866026
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007405	chr1	+	764	10	FSM	ENSMUSG00000053332.14	ENSMUST00000160429.8	759	10	0	-5	0	0	multi-exon	FALSE	canonical	3	3085	junction_6	1099.1542202985	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007413	chr1	+	772	11	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1206	junction_6	1448.71477178912	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007414	chr1	+	2817	2	ISM	ENSMUSG00000053332.14	ENSMUST00000159663.8	346	8	0	0	0	0	intron_retention	FALSE	canonical	3	3576	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr1_+_160862765_160863321
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007430	chr1	+	2740	3	FSM	ENSMUSG00000064816.3_ENSMUSG00000064440.3_ENSMUSG00000053332.14	ENSMUST00000160551.2	549	3	-2187	-4	0	0	multi-exon	FALSE	canonical	3	5177	junction_1	196	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_160865118_160865564_160865608_160865794
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007440	chr1	-	2734	17	FSM	ENSMUSG00000026709.11	ENSMUST00000035430.4	3619	17	-5	890	-5	8	multi-exon	TRUE	canonical	3	321	junction_5	41.9044672439586	261	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTGTTTTCCAAGCAT	NA	False	NA	-2	True	AATGAA	-40	NA	160898233	160869060	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007449	chr1	-	186	1	Intergenic	novelGene_254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGGGCTGGAGAGATGG	NA	False	NA	NA	False	NA	NA	NA	160895596	160895410	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_160895400_160895600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007479	chr1	+	192	1	Intergenic	novelGene_255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGGAAATTGGTAGTCA	NA	False	NA	NA	False	NA	NA	NA	161024167	161024359	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_161024200_161024400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007483	chr1	-	1490	5	FSM	ENSMUSG00000026701.16	ENSMUST00000071718.12	2387	5	5	892	5	11	multi-exon	FALSE	canonical	3	1689	junction_3	62.8823305865805	509	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATGTTTTAAAGTACTAC	NA	False	NA	0	True	AATAAA	-21	NA	161078784	161068573	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_161069420_161071144_161071292_161071765_161071913_161074826_161074984_161078591
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007504	chr1	+	206	1	Intergenic	novelGene_256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATTTACTTAAAATACAT	9301	False	NA	NA	False	NA	NA	NA	161160287	161160493	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_161160300_161160500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007511	chr1	-	5752	24	NIC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-166	-729	combination_of_known_junctions	FALSE	canonical	3	62	junction_17	27.0440374610156	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTCTTCTGTCCTT	252	False	NA	-2	True	AATAAA	-23	NA	161704417	161644411	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161673128_161673150_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680505_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007515	chr1	-	5762	24	FSM	ENSMUSG00000040297.13	ENSMUST00000048377.11	6327	24	-164	729	-164	-729	multi-exon	FALSE	canonical	3	81	junction_17	25.1317135224534	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTCTTCTGTCCTT	254	False	NA	-2	True	AATAAA	-23	NA	161704415	161644411	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161673128_161673150_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007535	chr1	+	225	1	Intergenic	novelGene_257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATGAAGATAAGAATGCT	NA	False	NA	NA	False	NA	NA	NA	161908753	161908978	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_161908800_161909000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007542	chr1	-	2987	8	FSM	ENSMUSG00000026694.20	ENSMUST00000028017.16	4541	8	10	1544	-3	8	multi-exon	FALSE	canonical	3	51	junction_6	17.6704526812185	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTTTATCTCAAGTATT	NA	False	NA	-3	True	NA	NA	NA	162376110	162361239	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_162362120_162363410_162363543_162364687_162364901_162366400_162366569_162369826_162370023_162371754_162371955_162373336_162374097_162375672
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007550	chr1	+	2222	8	FSM	ENSMUSG00000026696.16	ENSMUST00000135241.8	1461	8	29	-790	-8	790	multi-exon	FALSE	canonical	3	271	junction_7	26.2336440784092	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAAGTGGTAGCCTAGGT	NA	False	NA	NA	False	NA	NA	NA	162398187	162423724	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194_162420247_162422114
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007594	chr1	+	2967	14	FSM	ENSMUSG00000026584.15	ENSMUST00000027876.11	4368	14	292	1109	252	215	multi-exon	FALSE	canonical	3	75	junction_8	12.9505203112215	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGCTCTTTTATGTGCT	NA	False	NA	9	True	AATAAA	-18	NA	163757625	163781586	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007606	chr1	+	1416	2	FSM	ENSMUSG00000041396.14	ENSMUST00000111490.2	1419	2	0	3	0	-3	multi-exon	FALSE	canonical	3	75	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTGTGACTGTTCAATT	NA	False	NA	6	True	AATAAA	-13	NA	163822457	163824809	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_163822547_163823482
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007608	chr1	+	1512	2	FSM	ENSMUSG00000041396.14	ENSMUST00000045694.14	1513	2	1	0	1	0	multi-exon	FALSE	canonical	3	49	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGACTGTTCAATTTCT	NA	False	NA	9	True	AATAAA	-16	NA	163822458	163824812	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_163822641_163823482
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007613	chr1	+	221	1	Intergenic	novelGene_258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTGGAGCAGGTCTTT	NA	False	NA	NA	False	NA	NA	NA	163846847	163847068	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_163846800_163847100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007620	chr1	+	235	1	Intergenic	novelGene_259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATCCAAGGAGGAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	164024521	164024756	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_164024500_164024800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007644	chr1	+	3429	6	FSM	ENSMUSG00000040918.13	ENSMUST00000159230.8	3432	6	3	0	3	0	multi-exon	FALSE	canonical	3	46	junction_2	97.8296478578963	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCTTTTCACTCAGAA	NA	False	NA	13	True	AATAAA	-15	NA	164076626	164092938	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_164077026_164084315_164084805_164088360_164088587_164089615_164089809_164090188_164090331_164090958
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007658	chr1	-	2646	7	FSM	ENSMUSG00000026577.14	ENSMUST00000120447.8	2430	7	2	-218	2	218	multi-exon	FALSE	canonical	3	158	junction_1	15.0738920727933	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGCCCTTTCCTTTCA	NA	False	NA	-19	True	AATAAA	-18	NA	164135056	164118739	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164130290_164134007_164134086_164134715
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007687	chr1	-	2639	6	FSM	ENSMUSG00000026576.13	ENSMUST00000027863.13	2580	6	-55	-4	-55	4	multi-exon	FALSE	canonical	3	1015	junction_5	105.155123508082	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTGACTCGATTGTCT	NA	False	NA	-12	True	AATAAA	-20	NA	164285979	164264673	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_164266109_164266867_164266952_164269025_164269211_164270763_164270920_164281057_164281187_164285329
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007695	chr1	-	3779	5	NIC	ENSMUSG00000026576.13	novel	2580	6	NA	NA	21	0	intron_retention	FALSE	canonical	3	1015	junction_4	108.729020964966	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACGTGTGTGACTCGATT	NA	False	NA	-16	True	AATAAA	-16	NA	164285570	164264677	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_-_164266109_164266867_164266952_164269025_164270920_164281057_164281187_164285329
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007703	chr1	+	197	1	Intergenic	novelGene_260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCTCACCCCACTATTTT	NA	False	NA	NA	False	NA	NA	NA	164359080	164359277	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_164359100_164359300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007708	chr1	+	192	1	Intergenic	novelGene_261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGATGGCAGGCA	NA	False	NA	NA	False	NA	NA	NA	164732305	164732497	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_164732300_164732500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007717	chr1	-	5382	9	NNC	ENSMUSG00000040848.12	novel	680	9	NA	NA	-26	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	24.9019954019753	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTAGTGTTGTCTCTT	NA	False	NA	NA	False	AATAAA	-22	NA	165021916	165001909	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr1_-_165004885_165004942_165006865_165009620_165009651_165011395_165011452_165011538_165011575_165012576_165012659_165015537_165015624_165015816_165015904_165021808
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007726	chr1	-	1768	7	FSM	ENSMUSG00000040843.11	ENSMUST00000043235.8	4380	7	-18	2630	-18	666	multi-exon	FALSE	canonical	3	508	junction_2	54.8414381041684	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCTGTTTATTTCAGCT	NA	False	NA	1	True	AATAAA	-24	NA	165064530	165042484	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_165043450_165045351_165045415_165047667_165047764_165050097_165050230_165055073_165055174_165055836_165056017_165064298
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007735	chr1	+	249	1	Intergenic	novelGene_262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATTTGTGTGTTTGTGC	NA	False	NA	NA	False	NA	NA	NA	165093115	165093364	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_165093100_165093400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007746	chr1	-	172	1	Intergenic	novelGene_263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACTTGTTACTTTTGGA	NA	False	NA	NA	False	NA	NA	NA	165143003	165142831	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_165142800_165143000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007761	chr1	+	746	5	FSM	ENSMUSG00000026568.7	ENSMUST00000027853.6	1025	5	185	94	-2	1	multi-exon	FALSE	canonical	3	408	junction_4	28.8704000665041	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTCTTTACATTTGCCT	NA	False	NA	13	True	AATAAA	-18	NA	165288790	165308689	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_165289081_165302522_165302564_165305789_165305875_165307035_165307148_165308471
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007771	chr1	-	1833	3	FSM	ENSMUSG00000026566.16	ENSMUST00000194437.6	643	3	-17	-1173	-1	0	multi-exon	FALSE	canonical	3	25	junction_1	400.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTTGTCTGCTTGTTTT	NA	False	NA	-1	True	AATACA	-19	NA	165462099	165419808	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_165421247_165436006_165436174_165461871
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007780	chr1	-	2180	5	FSM	ENSMUSG00000026566.16	ENSMUST00000068705.13	2171	5	-9	0	-1	0	multi-exon	FALSE	canonical	3	343	junction_1	201.827896981562	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTTGTCTGCTTGTTTT	NA	False	NA	-1	True	AATACA	-19	NA	165462099	165419808	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_165421247_165432178_165432312_165433177_165433392_165436006_165436174_165461871
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007798	chr1	-	186	1	Intergenic	novelGene_264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGAGAAGCCGGGCGGCG	NA	False	NA	NA	False	NA	NA	NA	165439503	165439317	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_165439300_165439500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007802	chr1	-	2529	3	NNC	ENSMUSG00000040723.15	novel	5001	6	NA	NA	51023	2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	12	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTGGTTCTTATTCTGA	NA	False	NA	0	True	AATAAA	-13	NA	165484594	165476513	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr1_-_165477780_165482873_165483606_165484063
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007810	chr1	+	2149	4	FSM	ENSMUSG00000040713.13	ENSMUST00000111432.10	2163	4	14	0	14	0	multi-exon	FALSE	canonical	3	459	junction_1	24.0554914035583	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTGGACTGATTTCTG	NA	False	NA	NA	False	ATTAAA	-18	NA	165591328	165602877	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_165591708_165597381_165597502_165598200_165598386_165601412
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007818	chr1	+	198	1	Intergenic	novelGene_265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGTCTAGATTTAAGCCA	NA	False	NA	NA	False	NA	NA	NA	165612860	165613058	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_165612900_165613100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007827	chr1	+	206	1	Intergenic	novelGene_266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATGGACCTTGGGGAAGT	NA	False	NA	NA	False	NA	NA	NA	165822783	165822989	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_165822800_165823000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007843	chr1	+	2360	7	FSM	ENSMUSG00000000544.15	ENSMUST00000060833.14	2515	7	155	0	-24	0	multi-exon	FALSE	canonical	3	176	junction_6	19.1398362932741	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTGTTCACCCATC	NA	False	NA	10	True	AATAAA	-19	NA	165957961	165994079	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_165958174_165974207_165974363_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007871	chr1	-	4595	7	FSM	ENSMUSG00000026558.14	ENSMUST00000053686.9	4731	7	136	0	136	0	multi-exon	FALSE	canonical	3	994	junction_5	17.625738755203	272	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTTGTGGGTGCCTGGT	NA	False	NA	0	True	AATAAA	-32	NA	167112753	167050451	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_167054091_167055300_167055350_167057461_167057560_167062260_167062404_167064171_167064269_167065057_167065218_167112344
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007885	chr1	+	198	1	Intergenic	novelGene_267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCCACCTGCCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	167107375	167107573	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_167107400_167107600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007893	chr1	+	1292	7	FSM	ENSMUSG00000052428.11	ENSMUST00000195015.6	1573	7	282	-1	-10	1	multi-exon	FALSE	canonical	3	491	junction_3	23.6108496717552	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGTCTCCTGTTCAAAA	NA	False	NA	16	True	AATAAA	-23	NA	167136228	167158355	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_167136503_167136874_167136953_167141675_167141736_167143811_167143859_167146830_167146899_167153444_167153590_167157735
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007902	chr1	+	214	1	Intergenic	novelGene_268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTTTAGGGCTGGTGA	NA	False	NA	NA	False	NA	NA	NA	167143222	167143436	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_167143200_167143400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007913	chr1	+	206	1	Intergenic	novelGene_269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGTTTTAGTATGGAGT	NA	False	NA	NA	False	NA	NA	NA	167143446	167143652	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_167143400_167143700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007920	chr1	+	221	1	Intergenic	novelGene_270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCCGGGTGTGGTGGTGC	NA	False	NA	NA	False	AAAACA	-13	NA	167166054	167166275	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_167166100_167166300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007925	chr1	+	2845	11	FSM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	-9	-1	-9	1	multi-exon	FALSE	canonical	3	593	junction_2	45.3586816386896	447	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGCCGTCTTAATTT	NA	False	NA	7	True	ATTAAA	-19	NA	167177550	167196102	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240_167183376_167184098_167184296_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007934	chr1	-	682	6	FSM	ENSMUSG00000026688.6	ENSMUST00000028005.3	1097	6	0	415	0	-415	multi-exon	FALSE	canonical	3	373	junction_1	22.7912263820971	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGCCTGCATCTCTTT	4956	False	NA	0	True	AATAAA	-31	NA	167221410	167199949	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_167200212_167201361_167201435_167203020_167203079_167204829_167204904_167205860_167205985_167221319
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007945	chr1	-	163	1	Intergenic	novelGene_271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAGGAACTCGGAAAA	NA	False	NA	NA	False	NA	NA	NA	168272176	168272013	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_168272000_168272200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007956	chr1	-	2080	15	FSM	ENSMUSG00000026683.15	ENSMUST00000028000.13	2068	15	-12	0	-12	0	multi-exon	TRUE	canonical	3	87	junction_14	29.0531708199618	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGTTATCCAGGATGTT	NA	False	NA	-9	True	AATAAA	-26	NA	169359009	169325879	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169356304_169356381_169358890
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007973	chr1	-	2264	10	FSM	ENSMUSG00000026670.16	ENSMUST00000111350.10	2311	10	-13	60	-13	4	multi-exon	FALSE	canonical	3	102	junction_2	66.4981202741852	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTTTCTACCTTAAGAAA	NA	False	NA	0	True	AATAAA	-20	NA	170002539	169969566	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_169970142_169970965_169971033_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170002318
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007979	chr1	-	2315	11	FSM	ENSMUSG00000026670.16	ENSMUST00000111351.10	2287	11	-24	-4	-13	4	multi-exon	FALSE	canonical	3	181	junction_3	44.8905335232274	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTTTCTACCTTAAGAAA	NA	False	NA	0	True	AATAAA	-20	NA	170002539	169969566	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_169970142_169970965_169971033_169975564_169975616_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170002318
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000007998	chr1	+	182	1	Intergenic	novelGene_272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACACACATCTGAGCCAT	NA	False	NA	NA	False	NA	NA	NA	169982342	169982524	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_169982300_169982500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008003	chr1	-	7874	8	FSM	ENSMUSG00000026667.15	ENSMUST00000027979.14	7864	8	-10	0	-10	0	multi-exon	FALSE	canonical	3	88	junction_5	8.63311138842179	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTCTTATTTCTTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	170042976	170020988	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_170027583_170032683_170032773_170034682_170034782_170034914_170034992_170036223_170036319_170038599_170038792_170039804_170040098_170042541
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008023	chr1	+	194	1	Intergenic	novelGene_273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAAGACCATGGGAACAA	9992	False	NA	NA	False	NA	NA	NA	170640902	170641096	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_170640900_170641100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008029	chr1	+	199	1	Intergenic	novelGene_274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGACTTGACAGTGGAGAAA	NA	False	NA	NA	False	NA	NA	NA	170686365	170686564	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_170686400_170686600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008035	chr1	-	1288	6	FSM	ENSMUSG00000026659.14	ENSMUST00000027970.14	1374	6	87	-1	4	1	multi-exon	FALSE	canonical	3	209	junction_3	62.7917191992702	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTGTTAGATGGTTTA	NA	False	NA	-1	True	ATTAAA	-17	NA	170713022	170701755	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_170702140_170707228_170707416_170707698_170707796_170708141_170708261_170708483_170708598_170712635
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008066	chr1	-	1179	6	FSM	ENSMUSG00000058076.13	ENSMUST00000111336.10	3171	6	0	1992	0	250	multi-exon	TRUE	canonical	3	578	junction_5	147.434866975217	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTGGAATCTAGTGACA	456	False	NA	1	True	ATTAAA	-23	NA	170978172	170956725	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_170957475_170963561_170963726_170966262_170966325_170971126_170971229_170973324_170973382_170978127
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008081	chr1	+	243	1	Intergenic	novelGene_275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCAACCCACTGCTCCCA	NA	False	NA	NA	False	AAAAAG	-37	NA	170970796	170971039	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_170970800_170971000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008091	chr1	+	209	1	Intergenic	novelGene_276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAATTAAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	170974493	170974702	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_170974500_170974700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008099	chr1	-	1550	10	FSM	ENSMUSG00000005674.10	ENSMUST00000005817.9	4712	10	62	3100	-1	-748	multi-exon	FALSE	canonical	3	83	junction_9	16.1314048434171	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCCTGGTTTCTCCATT	9571	False	NA	92	True	AAAAAG	-13	NA	171050021	171046679	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048373_171048476_171048736_171048830_171049140_171049209_171049472_171049723_171049943
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008104	chr1	-	1640	13	FSM	ENSMUSG00000013593.13	ENSMUST00000013737.13	1623	13	-17	0	-17	0	multi-exon	FALSE	canonical	3	1142	junction_12	107.460457843804	959	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTAATGTGTCTTTCTT	NA	False	NA	-1	True	ATTAAA	-28	NA	171074708	171062421	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_171062657_171062841_171062900_171063925_171064010_171064174_171064271_171064708_171064839_171065513_171065634_171065855_171065942_171066083_171066162_171066278_171066467_171066842_171066964_171068515_171068707_171073659_171073767_171074562
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008119	chr1	+	186	1	Intergenic	novelGene_277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGGAGGAGGAGGAGGA	NA	False	NA	NA	False	NA	NA	NA	171089368	171089554	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_171089400_171089600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008133	chr1	+	196	1	Intergenic	novelGene_278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGAGAGGAAAGGGAAG	NA	False	NA	NA	False	NA	NA	NA	171095775	171095971	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_171095800_171096000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008148	chr1	-	983	7	FSM	ENSMUSG00000062963.11	ENSMUST00000080001.9	1007	7	24	0	-13	0	multi-exon	FALSE	canonical	3	257	junction_6	130.826539101718	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGGTTCTCATTGATG	7307	False	NA	0	True	AATAAA	-18	NA	171122573	171116135	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_171116545_171116743_171116835_171117090_171117168_171117456_171117521_171117721_171117790_171122206_171122401_171122493
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008159	chr1	+	190	1	Intergenic	novelGene_279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCACTGTCATGCATTC	2165	False	NA	NA	False	NA	NA	NA	171128267	171128457	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_171128300_171128500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008161	chr1	+	203	1	Intergenic	novelGene_280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCAATACCATCCAACCGA	7855	False	NA	NA	False	NA	NA	NA	171133957	171134160	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_171134000_171134200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008171	chr1	-	220	1	Intergenic	novelGene_281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACTCTAGCTCCCAAATA	NA	False	NA	NA	False	AATAAA	-23	NA	171138417	171138197	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_171138200_171138400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008180	chr1	+	2286	1	Intergenic	novelGene_282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTTTCTTGTGGGTGATT	NA	False	NA	NA	False	NA	NA	NA	171139985	171142271	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_171140000_171142300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008211	chr1	-	1341	7	FSM	ENSMUSG00000013997.11	ENSMUST00000111295.8	1335	7	1	-7	1	7	multi-exon	TRUE	canonical	3	74	junction_6	27.0025718939676	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACATGTCTTTTGGGGGC	880	False	NA	-3	True	AATATA	-15	NA	171173212	171169804	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171173135
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008231	chr1	+	1734	4	FSM	ENSMUSG00000006412.11	ENSMUST00000135941.8	1735	4	1	0	1	0	multi-exon	FALSE	canonical	3	1860	junction_3	112.860779527503	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTCTATTTTTTGT	NA	False	NA	5	True	NA	NA	NA	171173238	171186822	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_171173355_171184097_171184187_171184272_171184397_171185417
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008238	chr1	+	684	4	FSM	ENSMUSG00000006412.11	ENSMUST00000006579.5	885	4	-31	232	29	200	multi-exon	FALSE	canonical	3	27	junction_3	957.822994550083	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATAGCCTGAACCTTTAT	NA	False	NA	29	True	NA	NA	NA	171173266	171185738	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_171173355_171184097_171184187_171184272_171184397_171185355
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008246	chr1	+	181	1	Intergenic	novelGene_283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTAGAACTGGAGGTAAG	449	False	NA	NA	False	NA	NA	NA	171230325	171230506	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_171230300_171230500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008251	chr1	+	3655	7	ISM	ENSMUSG00000048865.17	ENSMUST00000056449.9	4494	12	14249	0	14204	0	3prime_fragment	FALSE	canonical	0	0	junction_5	9.51606828241346	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTATGTACTTTGTCTT	894	False	NA	NA	False	AATAAA	-28	NA	171230770	171237808	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr1_+_171230909_171231348_171231524_171231601_171231706_171231788_171231867_171232377_171232747_171234925_171235204_171235295
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008260	chr1	+	1785	10	FSM	ENSMUSG00000026641.14	ENSMUST00000161241.8	2167	10	0	382	0	3	multi-exon	FALSE	canonical	3	185	junction_1	10.3363197596069	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCTGTCTTCCTCCTTTT	6737	False	NA	66	True	GATAAA	-18	NA	171238880	171246328	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_171239009_171242004_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008273	chr1	+	188	1	Intergenic	novelGene_284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGATCCGGGGCTGGGC	9157	False	NA	NA	False	NA	NA	NA	171261332	171261520	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_171261300_171261500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008287	chr1	+	191	1	Intergenic	novelGene_285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCTACAGCCGGGCAGG	4177	False	NA	NA	False	NA	NA	NA	171292252	171292443	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_171292300_171292400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008301	chr1	-	2297	8	FSM	ENSMUSG00000026556.16	ENSMUST00000027837.13	5698	8	-2	3403	-2	66	multi-exon	FALSE	canonical	3	70	junction_3	8.90768986749708	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCCTGCCCTCCAATTTT	NA	False	NA	-2	True	GATAAA	-23	NA	171854864	171831929	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394_171840516_171840649_171840913_171854564
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008309	chr1	+	290	1	Intergenic	novelGene_286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTTTTGGGCAGGATT	NA	False	NA	NA	False	GGGGCT	-43	NA	171879014	171879304	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_171879000_171879300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008315	chr1	-	2905	17	FSM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	-4	0	-4	0	multi-exon	FALSE	canonical	3	465	junction_8	31.8580224394108	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGTTTGGTATTCTTC	8992	False	NA	50	True	ATTAAA	-21	NA	171910366	171893579	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008322	chr1	-	2911	18	FSM	ENSMUSG00000003458.13	ENSMUST00000140643.8	3016	18	99	6	99	-6	multi-exon	FALSE	canonical	3	15	junction_16	166.01196438311	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTTGTTGTTTGGTA	9095	False	NA	44	True	ATTAAA	-15	NA	171910263	171893585	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171903192_171903308_171908778_171908884_171910167
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008323	chr1	-	2802	17	NNC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	103	-6	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	128.389300566675	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTTGTTGTTTGGTA	9099	False	NA	44	True	ATTAAA	-15	NA	171910259	171893585	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr1_-_171894364_171894897_171895111_171895345_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008330	chr1	+	4647	33	FSM	ENSMUSG00000026553.18	ENSMUST00000135192.8	4622	33	-17	-8	-17	3	multi-exon	FALSE	canonical	1	295	junction_11	137.915678495956	338	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCGTTTCCCTGTTTGA	2747	False	NA	18	True	AATAAA	-23	NA	171910078	171949900	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008346	chr1	+	2411	8	FSM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	0	-494	0	494	multi-exon	FALSE	canonical	3	409	junction_6	20.1666526114529	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACTTCGAGTTCGTAACA	NA	False	NA	22	True	AAGAAA	-19	NA	171954321	171963344	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008359	chr1	+	1855	8	NNC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_2	126.880950146994	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGTTATTTTTCATC	NA	False	NA	24	True	AATAAA	-14	NA	171954333	171962850	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr1_+_171954416_171956197_171956308_171956771_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008376	chr1	+	3799	14	FSM	ENSMUSG00000026554.16	ENSMUST00000192704.6	2859	14	-12	-928	-10	5	multi-exon	TRUE	canonical	3	161	junction_1	115.931269170995	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGGTATGTGGTCCA	NA	False	NA	21	True	AGTAAA	-21	NA	171975696	172023961	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_171975906_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008387	chr1	-	2428	4	FSM	ENSMUSG00000013698.13	ENSMUST00000013842.12	2501	4	73	0	-34	0	multi-exon	FALSE	canonical	3	108	junction_1	8.37987005998436	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACTGATTCTAGAATCT	NA	False	NA	-4	True	AATAAA	-20	NA	172034298	172024294	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_172026258_172026677_172026834_172027974_172028149_172034163
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008399	chr1	-	3453	23	FSM	ENSMUSG00000007097.15	ENSMUST00000085913.11	6227	23	0	2774	0	60	multi-exon	FALSE	canonical	3	93	junction_19	23.4067518690196	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACTCTGCTACATTTTC	NA	False	NA	-2	True	NA	NA	NA	172125631	172102049	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172118759_172118964_172120893_172120954_172121138_172121244_172125447
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008434	chr1	+	185	1	Intergenic	novelGene_287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAAACCTCTACCAGGG	NA	False	NA	NA	False	NA	NA	NA	172255070	172255255	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_172255100_172255300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008439	chr1	+	183	1	Intergenic	novelGene_288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGAACTTTGGGGCTGT	NA	False	NA	NA	False	NA	NA	NA	172274102	172274285	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_172274100_172274300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008458	chr1	+	1819	12	FSM	ENSMUSG00000026546.17	ENSMUST00000085894.12	1908	12	88	1	-4	-1	multi-exon	TRUE	canonical	3	18	junction_1	6.26415751889171	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACAGCTCCACTTCACTG	5510	False	NA	5	True	ATTAAA	-18	NA	172348698	172373436	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_172348749_172355356_172355483_172357376_172357520_172359647_172359793_172360097_172360269_172361512_172361692_172362777_172362908_172366045_172366193_172368053_172368168_172368751_172368946_172372658_172372884_172373241
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008463	chr1	-	193	1	ISM	ENSMUSG00000085184.10	ENSMUST00000132370.9	599	3	12341	3	12341	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGGACAATAAGCACCTT	NA	False	NA	NA	False	NA	NA	NA	172365895	172365702	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr1_-_172365700_172365900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008468	chr1	+	187	1	Intergenic	novelGene_289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTTACAGAGACAAAGTGT	971	False	NA	NA	False	NA	NA	NA	172436276	172436463	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_172436300_172436500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008478	chr1	+	2217	9	ISM	ENSMUSG00000037860.16	ENSMUST00000147604.8	2839	12	69715	334	-4	-326	3prime_fragment	FALSE	canonical	3	62	junction_1	21.7884000100971	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGAGATATCATTCTTC	NA	False	NA	11	True	NA	NA	NA	173248159	173293272	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr1_+_173248253_173255324_173255465_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008488	chr1	+	214	1	Intergenic	novelGene_290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAGTAGATACCTATAGG	NA	False	NA	NA	False	NA	NA	NA	174275165	174275379	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_174275200_174275400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008490	chr1	-	1627	10	FSM	ENSMUSG00000026526.15	ENSMUST00000027810.14	2636	10	7	1002	7	0	multi-exon	FALSE	canonical	3	699	junction_3	99.2506491566916	474	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTTTAAAATTTAATTTA	799	False	NA	-14	True	AATAAA	-39	NA	175453194	175428941	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_175429133_175431503_175431658_175433620_175433749_175435382_175435587_175437202_175437369_175439712_175439896_175442302_175442480_175444094_175444206_175446616_175446752_175453016
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008499	chr1	-	6933	2	FSM	ENSMUSG00000078185.4	ENSMUST00000104984.4	6905	2	-28	0	-28	0	multi-exon	FALSE	canonical	3	18	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTGCTCAATTGATGAA	NA	False	NA	3	True	AATAAA	-17	NA	175520224	175509802	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_175516247_175519735
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008518	chr1	+	3010	15	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	-12	6	combination_of_known_junctions	FALSE	canonical	3	175	junction_2	73.1663257550206	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAATTGGACAAATCTTC	9754	False	NA	23	True	AATAAA	-31	NA	175708347	175736316	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_+_175708423_175708697_175708921_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008526	chr1	+	2843	15	FSM	ENSMUSG00000039748.12	ENSMUST00000039725.12	7796	15	207	4746	-6	-1	multi-exon	FALSE	canonical	3	208	junction_2	66.5922714152693	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAAATGCTAATTGGACA	9760	False	NA	16	True	AATAAA	-24	NA	175708353	175736309	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008544	chr1	+	200	1	Intergenic	novelGene_291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAATGTGAGAATTG	NA	False	NA	NA	False	NA	NA	NA	175713635	175713835	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_175713600_175713800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008575	chr1	+	212	1	Intergenic	novelGene_292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAGACGAGTACTACCG	NA	False	NA	NA	False	ATTAAA	-20	NA	177630621	177630833	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_177630600_177630800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008583	chr1	+	3984	5	FSM	ENSMUSG00000026502.14	ENSMUST00000027783.14	8802	5	115	4703	115	1697	multi-exon	FALSE	canonical	3	163	junction_4	12.7573508221731	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTATAGTTCTTTCTGA	NA	False	NA	NA	False	ATTAAA	-19	NA	178015212	178080164	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_178015524_178065477_178065551_178070177_178070272_178071906_178072049_178076800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008601	chr1	-	183	1	Intergenic	novelGene_293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACTTTATTTTAGGAAGA	NA	False	NA	NA	False	NA	NA	NA	178140684	178140501	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_178140500_178140700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008606	chr1	+	468	4	FSM	ENSMUSG00000026500.7	ENSMUST00000027781.7	471	4	5	-2	5	2	multi-exon	FALSE	canonical	3	422	junction_3	43.5150037981793	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTACATGAAATCCTT	NA	False	NA	22	True	ATTAAA	-25	NA	178146699	178150260	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_178146774_178149309_178149425_178149506_178149571_178150045
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008628	chr1	-	5530	13	NIC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	9	-3467	intron_retention	FALSE	canonical	2	3444	junction_4	893.050526597211	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGTTTGGGATTCTCGC	NA	False	NA	-21	True	AATAAA	-15	NA	178165353	178155863	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178163521_178163611_178163724_178164517
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008640	chr1	-	148	1	Intergenic	novelGene_294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATCCTTTACCTCAT	NA	False	NA	NA	False	NA	NA	NA	178206694	178206546	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_178206500_178206700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008645	chr1	-	2155	7	ISM	ENSMUSG00000055067.16	ENSMUST00000068437.13	3360	9	154438	1016	-105057	-911	3prime_fragment	FALSE	canonical	3	343	junction_1	12.7758452644912	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGACTCCTTCACTGGG	NA	False	NA	NA	False	NA	NA	NA	178921967	178783626	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr1_-_178785128_178799752_178799862_178871301_178871477_178877855_178877944_178913888_178914000_178920430_178920534_178921899
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008654	chr1	-	1806	2	ISM	ENSMUSG00000055067.16	ENSMUST00000068437.13	3360	9	154438	136185	-105057	-133981	internal_fragment	FALSE	canonical	3	379	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTTGGCCTGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	178921967	178918795	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr1_-_178920534_178921899
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008661	chr1	+	191	1	Intergenic	novelGene_295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATGTCACGTGTTGATT	NA	False	NA	NA	False	NA	NA	NA	179046736	179046927	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_179046700_179046900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008668	chr1	+	230	1	Intergenic	novelGene_296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGACAACAATACAATACAAG	NA	False	NA	NA	False	NA	NA	NA	179204185	179204415	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_179204200_179204400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008679	chr1	-	2477	8	FSM	ENSMUSG00000026492.12	ENSMUST00000027769.6	2449	8	-27	-1	-27	1	multi-exon	FALSE	canonical	3	69	junction_1	6.92820323027551	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTATATGTGTGTT	7851	False	NA	NA	False	AATAAA	-16	NA	179373859	179355618	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_179356920_179358868_179359030_179359629_179359693_179361197_179361288_179365263_179365413_179369871_179370023_179372462_179372552_179373386
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008687	chr1	+	4660	11	FSM	ENSMUSG00000038949.9	ENSMUST00000040706.9	4709	11	49	0	49	0	multi-exon	FALSE	canonical	3	32	junction_8	8.09691299199886	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCCGAGAATTTATTTG	NA	False	NA	NA	False	TTTAAA	-17	NA	179373983	179455043	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_179374182_179406902_179407334_179420249_179420432_179429266_179429298_179432083_179432171_179432517_179432633_179433812_179433835_179434001_179434099_179437350_179438232_179450331_179450468_179452563
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008697	chr1	-	273	1	Intergenic	novelGene_297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGCCATGTGCTTTT	NA	False	NA	NA	False	NA	NA	NA	179476408	179476135	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_179476100_179476400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008701	chr1	+	1950	12	FSM	ENSMUSG00000038936.14	ENSMUST00000040538.10	1948	12	-2	0	-2	0	multi-exon	FALSE	canonical	3	160	junction_9	16.3434218576322	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCCCCCTTTTTTGGT	NA	False	NA	12	True	AATAAA	-19	NA	179495772	179514754	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_179496111_179498147_179498261_179503955_179504037_179505605_179505736_179506444_179506495_179507149_179507281_179508056_179508175_179508997_179509118_179509215_179509273_179511769_179511882_179513260_179513343_179514136
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008709	chr1	-	238	1	Intergenic	novelGene_298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGCATAACTAAGGTCAA	7570	False	NA	NA	False	NA	NA	NA	179510466	179510228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_179510200_179510500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008728	chr1	-	190	1	Intergenic	novelGene_299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGAGGAAGAATGCAAAC	NA	False	NA	NA	False	NA	NA	NA	179685108	179684918	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_179684900_179685100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008745	chr1	-	1941	11	FSM	ENSMUSG00000010609.16	ENSMUST00000111108.10	1997	11	56	0	0	0	multi-exon	FALSE	canonical	2	16	junction_10	6.79411510058521	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTGTTTGGCCCCTTT	NA	False	NA	2	True	AATAAA	-19	NA	180083809	180054568	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_180055294_180056407_180056527_180056950_180057053_180057406_180057491_180061175_180061275_180062553_180062775_180063475_180063544_180066437_180066580_180068295_180068511_180073178_180073323_180083787
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008758	chr1	-	180	1	Intergenic	novelGene_300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAATAATGTGTGT	NA	False	NA	NA	False	NA	NA	NA	180147358	180147178	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_180147200_180147400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008767	chr1	+	3937	23	FSM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	-63	-1	-58	1	multi-exon	FALSE	canonical	3	1402	junction_6	226.960257925668	1723	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGTGTTGTGTGCCTCAT	3084	False	NA	11	True	ATTAAA	-19	NA	180396430	180428820	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008780	chr1	+	174	1	Intergenic	novelGene_301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	180466219	180466393	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_180466200_180466400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008783	chr1	+	2968	15	FSM	ENSMUSG00000058729.14	ENSMUST00000192561.6	3160	15	192	0	8	0	multi-exon	FALSE	canonical	3	75	junction_1	15.1320716307033	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCTGAGAATCTTACT	NA	False	NA	9	True	AATAAA	-19	NA	180468906	180518252	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_180468963_180475865_180475899_180478306_180478402_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008784	chr1	+	3111	16	NNC	ENSMUSG00000058729.14	novel	3160	15	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	32.1742478112888	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCTGAGAATCTTACT	NA	False	NA	9	True	AATAAA	-19	NA	180468906	180518252	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr1_+_180468963_180469414_180469558_180475865_180475899_180478306_180478402_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008802	chr1	+	208	1	Intergenic	novelGene_302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTCATTTAAACTATTAA	NA	False	NA	NA	False	NA	NA	NA	180494513	180494721	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_180494500_180494700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008824	chr1	-	1076	4	FSM	ENSMUSG00000060743.13	ENSMUST00000161308.8	2841	4	32	1733	3	132	multi-exon	TRUE	canonical	3	2337	junction_3	156.5907617539	216	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTCTGGTCTTTATTA	NA	False	NA	NA	False	ATTAAA	-16	NA	180641165	180630129	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_180630771_180637681_180637836_180639363_180639515_180641035
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008841	chr1	-	2327	1	Antisense	novelGene_ENSMUSG00000066652.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGTGTTTTTATTATC	NA	False	NA	NA	False	TATAAA	-8	NA	180721990	180719663	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr1_-_180719700_180722000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008845	chr1	+	2830	4	FSM	ENSMUSG00000066652.6	ENSMUST00000085797.6	2473	4	-43	-314	-43	314	multi-exon	FALSE	canonical	3	1148	junction_3	71.1071179434395	881	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCAGTGTCTGTTTATT	NA	False	NA	24	True	NA	NA	NA	180720629	180726982	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_180720999_180721699_180721947_180722160_180722407_180725014
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008864	chr1	+	1611	7	FSM	ENSMUSG00000026520.9	ENSMUST00000027802.9	1580	7	-25	-6	-25	6	multi-exon	FALSE	canonical	3	1025	junction_3	51.6120679255884	486	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCACTGTGTAGCCCAGG	4553	False	NA	38	True	NA	NA	NA	180731832	180735659	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_180732096_180732308_180732380_180733438_180733619_180733727_180733950_180734159_180734253_180734354_180734519_180735041
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008879	chr1	-	249	1	Intergenic	novelGene_303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAACTCAGGATTCACATG	NA	False	NA	NA	False	NA	NA	NA	180753320	180753071	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_180753100_180753300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008883	chr1	+	1607	4	FSM	ENSMUSG00000038793.9	ENSMUST00000037361.9	1620	4	14	-1	14	1	multi-exon	FALSE	canonical	3	187	junction_2	33.0790299468141	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTGTTTCCTTATTT	NA	False	NA	9	True	AATAAA	-18	NA	180762600	180765966	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_180762925_180764111_180764359_180764573_180764820_180765176
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008917	chr1	-	5176	22	NIC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	18	-158	intron_retention	TRUE	canonical	3	480	junction_17	72.5892678986292	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTATTAACATCTGAACC	NA	False	NA	0	True	AATAAA	-23	NA	180971751	180920981	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_-_180921475_180922548_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008934	chr1	+	3252	5	FSM	ENSMUSG00000062169.14	ENSMUST00000134115.8	3268	5	16	0	16	0	multi-exon	FALSE	canonical	3	1843	junction_1	136.918543302213	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATTGTTCTATTGCTTG	NA	False	NA	NA	False	NA	NA	NA	180978511	180996559	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_180978627_180981299_180981369_180983423_180983537_180989639_180989781_180993745
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008948	chr1	-	4373	14	FSM	ENSMUSG00000038733.15	ENSMUST00000162819.9	7045	14	26	2646	26	1223	multi-exon	FALSE	canonical	3	48	junction_11	31.9711408328487	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTAAGTGGCAACTCC	NA	False	NA	-2	True	AATAAA	-21	NA	181039517	181003438	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036567_181036673_181036777_181036878_181038640
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008958	chr1	+	188	1	Intergenic	novelGene_304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAAAGTCTTTCCCA	38	False	NA	NA	False	NA	NA	NA	181051295	181051483	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_181051300_181051500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008964	chr1	+	185	1	Intergenic	novelGene_305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGTTTTCTTTATTCTTT	2062	False	NA	NA	False	NA	NA	NA	181064128	181064313	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_181064100_181064300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008976	chr1	+	143	1	Intergenic	novelGene_306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAACAAACAAGTACATATG	1649	False	NA	NA	False	NA	NA	NA	181578295	181578438	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_181578300_181578400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008984	chr1	-	3517	14	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-2274	20	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_13	584.006656766795	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGCCACAGCTTTGG	NA	False	NA	-30	True	AATAAA	-21	NA	181672885	181642879	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181672806
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000008985	chr1	-	3566	14	FSM	ENSMUSG00000004880.12	ENSMUST00000005003.12	3510	14	-36	-20	-36	20	multi-exon	FALSE	canonical	3	1956	junction_6	154.844109428974	1971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGCCACAGCTTTGG	NA	False	NA	-30	True	AATAAA	-21	NA	181669980	181642879	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009009	chr1	+	205	1	Intergenic	novelGene_307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGACAGACAGACAGACTC	NA	False	NA	NA	False	NA	NA	NA	181682701	181682906	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_181682700_181682900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009038	chr1	+	213	1	Intergenic	novelGene_308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGTGTAGTTAGGAAT	NA	False	NA	NA	False	AATACA	-22	NA	181745451	181745664	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_181745500_181745700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009043	chr1	+	195	1	Antisense	novelGene_ENSMUSG00000102760.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATGCTATGTGAAACTT	NA	False	NA	NA	False	NA	NA	NA	181834972	181835167	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr1_+_181835000_181835200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009049	chr1	+	205	1	Intergenic	novelGene_309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGATCATTTCCTGAAG	3450	False	NA	NA	False	TTTAAA	-2	NA	181857222	181857427	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_181857200_181857400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009057	chr1	-	227	1	Intergenic	novelGene_310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCCCAAATACACTTGAC	6339	False	NA	NA	False	NA	NA	NA	181930887	181930660	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_181930700_181930900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009065	chr1	+	1328	3	FSM	ENSMUSG00000026511.8	ENSMUST00000027792.6	1367	3	31	8	0	-8	multi-exon	FALSE	canonical	3	1020	junction_2	65.5	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGATTTCTTGTATAG	NA	False	NA	18	True	AATAAA	-26	NA	181952345	181959964	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_181952541_181956248_181956318_181958900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009072	chr1	+	197	1	Intergenic	novelGene_311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAACTGCAAAAATCAGC	NA	False	NA	NA	False	NA	NA	NA	182019039	182019236	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_182019000_182019200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009103	chr1	-	3946	5	FSM	ENSMUSG00000047539.10	ENSMUST00000051431.10	4925	5	-6	985	5	-985	multi-exon	FALSE	canonical	3	148	junction_1	16.5604951616792	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGCTGGATTTTTTAGA	NA	False	NA	-21	True	AATAAA	-19	NA	182169189	182141651	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_182144851_182145374_182145571_182153818_182153958_182157438_182157549_182168887
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009111	chr1	-	184	1	Intergenic	novelGene_312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGGGATTTGTACAAAGA	NA	False	NA	NA	False	NA	NA	NA	182186394	182186210	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_182186200_182186400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009117	chr1	+	4409	18	FSM	ENSMUSG00000026510.11	ENSMUST00000117245.2	4361	18	-44	-4	-44	4	multi-exon	FALSE	canonical	3	97	junction_1	10.65761582562	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGGTTTTCCTTTTAA	NA	False	NA	12	True	AATAAA	-25	NA	182236692	182290001	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_182237016_182256458_182256607_182259123_182259238_182262916_182263000_182264462_182264565_182268401_182268577_182269186_182269369_182269697_182269863_182270197_182270427_182271889_182271998_182272225_182272375_182273838_182274302_182275965_182276745_182280219_182280358_182281262_182281397_182283261_182283429_182286324_182286525_182289251
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009130	chr1	-	3308	20	NNC	ENSMUSG00000026509.16	novel	3225	21	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	13.0719297068332	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCACCATGCCTTGTTTT	NA	False	NA	-5	True	AATAAA	-14	NA	182345166	182294823	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr1_-_182295801_182297743_182297803_182298243_182298361_182300085_182300165_182300488_182300558_182301446_182301512_182304815_182304874_182306112_182306179_182307270_182307308_182309011_182309224_182311750_182311938_182314108_182314270_182315279_182315355_182316558_182316645_182317529_182317614_182318431_182318601_182319626_182319761_182320316_182320436_182339771_182339842_182344682
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009144	chr1	-	4995	10	FSM	ENSMUSG00000030768.13	ENSMUST00000003035.12	4984	10	-11	0	-6	0	multi-exon	FALSE	canonical	3	35	junction_1	20.4420288428002	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTGTCTCCGTCGTTCT	NA	False	NA	2	True	AATAAA	-34	NA	183003060	182867829	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_182871435_182877807_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182955059_182955188_182984515_182984604_183002886
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009154	chr1	-	1429	9	ISM	ENSMUSG00000030768.13	ENSMUST00000003035.12	4984	10	3	9925	3	2	5prime_fragment	FALSE	canonical	3	56	junction_6	14.115040736746	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGCCTCTGCCTTGCTG	NA	False	NA	0	True	AATAAA	-15	NA	183003046	182877754	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr1_-_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182955059_182955188_182984515_182984604_183002886
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009162	chr1	+	209	1	Intergenic	novelGene_313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGCTTTACAGGTCTTT	NA	False	NA	NA	False	AAAAAG	-12	NA	183034867	183035076	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_183034900_183035100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009179	chr1	+	203	1	Intergenic	novelGene_314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACTATTTTAGAAGCTTC	NA	False	NA	NA	False	TTTAAA	-5	NA	183060267	183060470	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_183060300_183060500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009184	chr1	+	2424	10	FSM	ENSMUSG00000042901.11	ENSMUST00000109166.8	4279	10	-9	1864	-9	3	multi-exon	FALSE	canonical	3	74	junction_8	45.1526901978029	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGATGGTTGTTACACAG	NA	False	NA	NA	False	AATAAA	-16	NA	183078583	183104467	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_183079173_183085612_183085683_183087358_183087413_183087819_183087875_183094595_183094660_183094913_183095018_183097514_183097638_183099746_183099870_183103138_183103257_183103343
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009198	chr1	-	3040	23	NIC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	37	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_22	21.1026613025369	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	NA	False	NA	-1	True	CATAAA	-18	NA	183126920	183107681	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183126628
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009205	chr1	-	6330	28	FSM	ENSMUSG00000056050.16	ENSMUST00000194543.4	6330	28	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_27	39.9558741524534	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	4043	False	NA	-1	True	CATAAA	-18	NA	183150894	183107681	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183132406_183132550_183135177_183135484_183137604_183140360_183143388_183143476_183146987_183147122_183150737
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009215	chr1	+	2394	11	FSM	ENSMUSG00000072258.12	ENSMUST00000192076.3	2384	11	-10	0	-10	0	multi-exon	FALSE	canonical	3	59	junction_7	9.96042167782067	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAGTAGTATTTTATTC	NA	False	NA	16	True	AATAAA	-27	NA	183170314	183191020	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_183170499_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187725_183187850_183189427_183189583_183190053
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009225	chr1	+	218	1	Genic_Genomic	ENSMUSG00000104022.2	novel	NA	NA	NA	NA	1354	36	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAAAAAAAAATATTCTCC	NA	False	NA	NA	False	NA	NA	NA	183202939	183203157	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr1_+_183202900_183203200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009234	chr1	+	179	1	Intergenic	novelGene_315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACAAACAAAACCCCCAA	NA	False	NA	NA	False	NA	NA	NA	183820711	183820890	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_183820700_183820900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009251	chr1	+	188	1	Intergenic	novelGene_316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGTTTTTAAAAAG	NA	False	NA	NA	False	NA	NA	NA	184618691	184618879	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_184618700_184618900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009267	chr1	+	178	1	Intergenic	novelGene_317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGAGAAGTATGTTAA	NA	False	NA	NA	False	NA	NA	NA	184801728	184801906	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_184801700_184801900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009286	chr1	-	3571	23	FSM	ENSMUSG00000026618.12	ENSMUST00000027921.11	5471	23	-12	1912	-12	-1069	multi-exon	TRUE	canonical	3	288	junction_20	32.2887284275964	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGTGGATGACGAAGC	NA	False	NA	2	True	AATAAA	-36	NA	185061605	185018834	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_185019389_185020236_185020382_185021549_185021741_185022682_185022829_185023515_185023623_185026940_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009306	chr1	+	2187	9	FSM	ENSMUSG00000026617.17	ENSMUST00000027916.13	2200	9	8	5	8	-5	multi-exon	FALSE	canonical	3	151	junction_6	39.6957176531676	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGTAATTGCCTTTATT	NA	False	NA	NA	False	ATTAAA	-16	NA	185064353	185089969	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185084378_185084577_185086153_185086260_185088674
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009326	chr1	+	4992	32	FSM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	-91	5	-91	-5	multi-exon	FALSE	canonical	3	1945	junction_14	331.30791485156	2034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATCTATTTGGTTCATC	NA	False	NA	17	True	AATAAA	-19	NA	185095149	185160552	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009339	chr1	+	4891	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	567.466859681364	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATCTATTTGGTTCATC	NA	False	NA	17	True	AATAAA	-19	NA	185095254	185160552	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118532_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009348	chr1	+	5190	20	FSM	ENSMUSG00000026615.15	ENSMUST00000192284.6	5638	20	15	433	1	-433	multi-exon	FALSE	canonical	3	1945	junction_14	246.149122650716	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCCTATTTTGAGCTTAT	NA	False	NA	NA	False	AATAAA	-24	NA	185095255	185141963	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009369	chr1	-	187	1	Intergenic	novelGene_318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAATATTAAGGGGGGTG	NA	False	NA	NA	False	NA	NA	NA	185115567	185115380	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_185115400_185115600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009385	chr1	-	4374	3	NIC	ENSMUSG00000001305.6	novel	3092	4	NA	NA	-3	6	intron_retention	FALSE	canonical	3	1054	junction_2	5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCTTCCCTGCTCAGA	NA	False	NA	-10	True	ATTAAA	-18	NA	186481525	186453282	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_-_186453744_186468312_186472061_186481360
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009387	chr1	-	1190	5	FSM	ENSMUSG00000001305.6	ENSMUST00000001339.6	1321	5	23	108	-10	6	multi-exon	FALSE	canonical	3	944	junction_3	58.7962583843564	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCTTCCCTGCTCAGA	NA	False	NA	-10	True	ATTAAA	-18	NA	186481532	186453282	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_186453744_186468312_186468512_186469784_186469883_186471800_186472061_186481360
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009401	chr1	+	3465	1	FSM	ENSMUSG00000039224.2	ENSMUST00000045108.2	3212	1	22	-275	22	275	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGGTTTTTTGTTTTGTT	NA	False	NA	9	True	NA	NA	NA	186699634	186703099	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_186699600_186703100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009412	chr1	+	4827	10	FSM	ENSMUSG00000039210.17	ENSMUST00000065573.14	4547	10	-3	-277	0	0	multi-exon	FALSE	canonical	3	57	junction_8	10.9341463112378	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGTTGTTGGTGTGTTTCT	NA	False	NA	NA	False	AATAAA	-26	NA	186947704	187083901	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187048720_187048761_187054480_187054552_187073683_187073773_187080553
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009428	chr1	-	3769	18	FSM	ENSMUSG00000026608.14	ENSMUST00000085678.8	3706	18	-63	0	-62	0	multi-exon	FALSE	canonical	3	162	junction_13	20.9446461104513	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGTGTCTTCAGTTATT	NA	False	NA	-2	True	ATTAAA	-20	NA	188740100	188703291	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_188704881_188706262_188706402_188706483_188706669_188708807_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739726
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009444	chr1	+	179	1	Intergenic	novelGene_319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTAAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	188954920	188955099	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_188954900_188955100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009465	chr1	+	2123	3	NNC	ENSMUSG00000026604.18	novel	3810	2	NA	NA	-376	4	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	10	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTGGATTGTAGTTGC	NA	False	NA	6	True	AATAAA	-19	NA	189576863	189584177	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr1_+_189576951_189578530_189578610_189582220
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009470	chr1	-	212	1	Intergenic	novelGene_320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTACAGAAACAATACCTAA	NA	False	NA	NA	False	NA	NA	NA	189591791	189591579	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_-_189591600_189591800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009484	chr1	+	182	1	Intergenic	novelGene_321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGGGCCTGGTGAAAG	NA	False	NA	NA	False	NA	NA	NA	190525521	190525703	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_190525500_190525700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009522	chr1	+	228	1	Intergenic	novelGene_322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATACATAGCAATTAAGTG	NA	False	NA	NA	False	AATAAA	-8	NA	190756224	190756452	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_190756200_190756500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009532	chr1	+	209	1	Intergenic	novelGene_323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCACATTGATCCTCTACA	1743	False	NA	NA	False	AATAAA	-22	NA	190762704	190762913	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_190762700_190762900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009535	chr1	+	209	1	Intergenic	novelGene_324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTACTGAAGAAACTCAC	NA	False	NA	NA	False	NA	NA	NA	190773257	190773466	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_190773300_190773500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009560	chr1	+	193	1	Intergenic	novelGene_325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCTTCAGGGGCCAGGG	NA	False	NA	NA	False	NA	NA	NA	191023276	191023469	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_191023300_191023500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009573	chr1	+	188	1	Intergenic	novelGene_326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAATTAAAATGTA	5614	False	NA	NA	False	NA	NA	NA	191042447	191042635	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_191042400_191042600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009575	chr1	+	2605	8	FSM	ENSMUSG00000026627.8	ENSMUST00000027940.6	2246	8	11	-370	11	370	multi-exon	TRUE	canonical	3	75	junction_7	21.6248156769306	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGTTTTGTTTTGTTT	NA	False	NA	NA	False	AATAAA	-30	NA	191058119	191083481	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_+_191058274_191060379_191060477_191070978_191071189_191072923_191073076_191077173_191077317_191078956_191079102_191080564_191080673_191081885
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009587	chr1	-	3122	13	FSM	ENSMUSG00000026626.12	ENSMUST00000067976.9	3088	13	-34	0	-34	0	multi-exon	FALSE	canonical	3	325	junction_3	33.6760506723827	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATTTGCTCTTTTGTCT	NA	False	NA	-4	True	AATAAA	-24	NA	191129272	191084171	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_191085307_191086070_191086173_191086727_191086856_191086938_191087059_191087219_191087271_191088530_191088585_191089083_191089193_191089988_191090049_191091121_191091253_191094445_191094539_191100837_191100940_191104666_191104864_191128432
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009597	chr1	+	189	1	Intergenic	novelGene_327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATACTCTCCATACAAAAAG	6193	False	NA	NA	False	NA	NA	NA	191231646	191231835	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_191231600_191231800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009632	chr1	+	205	1	Intergenic	novelGene_328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	265	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAAGCATAATTAGTCCA	3872	False	NA	NA	False	AAAAAG	-4	NA	191343329	191343534	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_191343300_191343500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009648	chr1	+	3172	8	NNC	ENSMUSG00000026622.16	novel	3227	8	NA	NA	33	-1	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_7	134.022233915397	56	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTGATGTTTGTATTC	NA	False	NA	28	True	TATAAA	-39	NA	191553588	191565161	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr1_+_191553854_191554258_191554477_191554603_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563269
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009690	chr1	+	183	1	Intergenic	novelGene_329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAAGTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	192783030	192783213	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_192783000_192783200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009697	chr1	-	2649	12	FSM	ENSMUSG00000016181.11	ENSMUST00000085555.7	5570	12	36	2885	8	466	multi-exon	FALSE	canonical	3	56	junction_4	6.18449140061635	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTTTATGCGTATTG	NA	False	NA	-17	True	NA	NA	NA	192812544	192789594	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_192790095_192796064_192796311_192796912_192797026_192797146_192797330_192799808_192800012_192800500_192800721_192802617_192803029_192804313_192804403_192805945_192806117_192810574_192810855_192811798_192811839_192812351
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009710	chr1	+	247	1	Intergenic	novelGene_330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAGAACCCCGAATTCCA	NA	False	NA	NA	False	NA	NA	NA	192936427	192936674	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_+_192936400_192936700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009721	chr1	-	1351	10	NIC	ENSMUSG00000016481.16	novel	1651	10	NA	NA	-12	2	combination_of_known_junctions	FALSE	canonical	3	121	junction_9	50.3432661280975	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGTGGTTCATACTTAT	NA	False	NA	1	True	AATAAA	-21	NA	194813881	194786095	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr1_-_194786216_194789125_194789231_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813809
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009729	chr1	-	1647	10	FSM	ENSMUSG00000016481.16	ENSMUST00000075451.12	1651	10	2	2	2	-2	multi-exon	FALSE	canonical	3	104	junction_9	54.0893179933677	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGGTGTGTGGTTCATAC	NA	False	NA	-3	True	AATAAA	-17	NA	194813867	194786099	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr1_-_194786216_194789125_194789231_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813495
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009739	chr10	+	188	1	Intergenic	novelGene_331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGAGAGTGCAAATCT	NA	False	NA	NA	False	NA	NA	NA	3569379	3569567	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_3569400_3569600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009745	chr10	+	200	1	Intergenic	novelGene_332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAATGAGCCTAAAAGACAA	1591	False	NA	NA	False	NA	NA	NA	3790968	3791168	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_3791000_3791200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009751	chr10	-	193	1	Intergenic	novelGene_333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAACTACATATATCAAAT	NA	False	NA	NA	False	NA	NA	NA	3885559	3885366	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_3885400_3885600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009761	chr10	+	3596	28	FSM	ENSMUSG00000040675.18	ENSMUST00000043735.8	3535	28	-58	-3	-32	3	multi-exon	FALSE	canonical	3	127	junction_27	66.4418431300526	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGCTAGTAAAGCCACTC	NA	False	NA	17	True	AATAAA	-22	NA	3923085	4106114	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105649
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009786	chr10	+	169	1	Intergenic	novelGene_334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTCTTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3957201	3957370	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_3957200_3957400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009792	chr10	+	190	1	Intergenic	novelGene_335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCATTGGAATGTATGG	NA	False	NA	NA	False	NA	NA	NA	4172606	4172796	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_4172600_4172800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009801	chr10	+	6343	6	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-12499	1	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_2	623.094021797674	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTGTTTTTTTATTAAA	NA	False	NA	24	True	AATAAA	-20	NA	4203880	4309471	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_+_4203967_4207397_4207470_4216390_4216669_4263742_4263858_4303141_4307940_4308477
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009805	chr10	+	6396	6	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-12498	1	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	627.571382394067	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTGTTTTTTTATTAAA	NA	False	NA	24	True	AATAAA	-20	NA	4203881	4309471	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_+_4203967_4207397_4207470_4216336_4216669_4263742_4263858_4303141_4307940_4308477
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009834	chr10	+	5978	3	FSM	ENSMUSG00000038587.11	ENSMUST00000239373.2	5956	3	-21	-1	-21	1	multi-exon	FALSE	canonical	3	114	junction_1	774.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTGTTTTTTTATTAAA	NA	False	NA	24	True	AATAAA	-20	NA	4284523	4309471	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_4284710_4303141_4307940_4308477
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009889	chr10	-	1812	5	FSM	ENSMUSG00000019773.8	ENSMUST00000019907.8	1940	5	135	-7	135	7	multi-exon	FALSE	canonical	3	762	junction_1	15.5623744974859	320	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCAGGTTTTTTTTGTTT	NA	False	NA	-2	True	AATAAA	-19	NA	5755465	5749152	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_5749823_5750255_5750436_5751151_5751243_5751868_5752533_5755258
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009902	chr10	+	199	1	Intergenic	novelGene_336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGATAACCATAATTTGGA	NA	False	NA	NA	False	NA	NA	NA	5766383	5766582	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_5766400_5766600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009915	chr10	+	191	1	Intergenic	novelGene_337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTTGGGAGACTAAGAGA	NA	False	NA	NA	False	NA	NA	NA	7018864	7019055	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_7018900_7019100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009927	chr10	-	178	1	Intergenic	novelGene_338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAGTCACTTTGAGG	NA	False	NA	NA	False	NA	NA	NA	7265153	7264975	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_7265000_7265200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009937	chr10	+	191	1	Intergenic	novelGene_339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTTAAAGTTTTAAAATT	NA	False	NA	NA	False	NA	NA	NA	7384332	7384523	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_7384300_7384500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009940	chr10	-	6441	6	FSM	ENSMUSG00000079685.11	ENSMUST00000177585.9	3815	6	50	-2676	-1	0	multi-exon	FALSE	canonical	3	25	junction_3	15.4324333790883	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTGTTCTCTTACTT	NA	False	NA	-1	True	ATTAAA	-16	NA	7423588	7390361	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_7395698_7396417_7396553_7397380_7397485_7406339_7406616_7406953_7407209_7423253
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009954	chr10	+	3382	7	FSM	ENSMUSG00000019796.13	ENSMUST00000019931.12	3386	7	4	0	4	0	multi-exon	FALSE	canonical	3	223	junction_6	23.7065391822594	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTCTTATAAATTATAG	7269	False	NA	23	True	AATAAA	-30	NA	7465584	7501247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_7466378_7471867_7472029_7474470_7474613_7478592_7478719_7479937_7480148_7484307_7484404_7499393
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009962	chr10	+	192	1	Intergenic	novelGene_340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAGGTTCCTGATCAAGG	NA	False	NA	NA	False	NA	NA	NA	7493201	7493393	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_7493200_7493400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009964	chr10	+	213	1	Intergenic	novelGene_341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCTGCATCACAGCCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	7501467	7501680	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_7501500_7501700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009966	chr10	-	2439	8	FSM	ENSMUSG00000019795.18	ENSMUST00000162606.8	2757	8	318	0	13	0	multi-exon	FALSE	canonical	3	339	junction_1	146.985630284746	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGATCCTTGGTAGTCA	NA	False	NA	0	True	AATAAA	-20	NA	7539054	7505136	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_7506741_7513819_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009972	chr10	-	2486	8	FSM	ENSMUSG00000019795.18	ENSMUST00000159917.8	2491	8	13	-8	13	0	multi-exon	FALSE	canonical	3	173	junction_1	203.876012741638	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGATCCTTGGTAGTCA	NA	False	NA	0	True	AATAAA	-20	NA	7539054	7505136	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_7506741_7513772_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009985	chr10	-	1174	7	FSM	ENSMUSG00000019795.18	ENSMUST00000163085.8	1132	7	-42	0	0	0	multi-exon	FALSE	canonical	3	667	junction_3	37.7491721763537	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCATTCTTGCTTTATT	NA	False	NA	1	True	AATAAA	-21	NA	7539067	7513493	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000009996	chr10	+	1306	8	FSM	ENSMUSG00000040034.16	ENSMUST00000040135.9	1286	8	-15	-5	-15	5	multi-exon	FALSE	canonical	3	1090	junction_2	84.4680835751418	504	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCTTGCTGCTTGCTT	NA	False	NA	25	True	AATAAA	-25	NA	7543251	7554650	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_7543446_7543765_7543889_7545316_7545395_7546702_7546884_7549348_7549485_7550769_7550922_7552003_7552127_7554331
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010025	chr10	+	1771	11	FSM	ENSMUSG00000019794.14	ENSMUST00000165806.8	1775	11	4	0	4	0	multi-exon	TRUE	canonical	3	353	junction_4	21.6323831327018	307	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTTCAATTTAGCACC	NA	False	NA	10	True	AATAAA	-19	NA	7601767	7638914	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_7601888_7614486_7614662_7617171_7617330_7619319_7619501_7624539_7624662_7627307_7627414_7628507_7628667_7635460_7635588_7636498_7636634_7637006_7637134_7638553
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010039	chr10	-	1532	8	FSM	ENSMUSG00000040006.14	ENSMUST00000039763.14	1557	8	25	0	-1	0	multi-exon	TRUE	canonical	3	22	junction_3	111.32321026119	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTATTTTTAATTTTT	7488	False	NA	-1	True	AATAAA	-17	NA	7656656	7643710	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_7644350_7646120_7646285_7649061_7649193_7649711_7649869_7650981_7651134_7653537_7653635_7655066_7655127_7656524
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010041	chr10	-	1542	8	FSM	ENSMUSG00000040006.14	ENSMUST00000124838.2	1525	8	-8	-9	-8	0	multi-exon	FALSE	canonical	3	252	junction_3	35.482102415679	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTATTTTTAATTTTT	7481	False	NA	-1	True	AATAAA	-17	NA	7656663	7643710	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_7644350_7646120_7646285_7649061_7649196_7649711_7649869_7650981_7651134_7653537_7653635_7655066_7655127_7656524
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010052	chr10	+	194	1	Antisense	novelGene_ENSMUSG00000040006.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAGAGTGTACTAAAACA	329	False	NA	NA	False	TTTAAA	-4	NA	7667861	7668055	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr10_+_7667900_7668100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010062	chr10	+	2885	13	FSM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	19	567	2	-567	multi-exon	FALSE	canonical	3	182	junction_12	33.3716446503115	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTACTTTTTTCTTTCTTT	1141	False	NA	15	True	AGTAAA	-20	NA	7668673	7698332	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010074	chr10	+	92	1	Intergenic	novelGene_342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGATTCTATTTATAAAC	NA	False	NA	NA	False	NA	NA	NA	8654322	8654414	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_8654300_8654400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010080	chr10	+	215	1	Intergenic	novelGene_343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCAAGGGCCTGATCAAG	NA	False	NA	NA	False	NA	NA	NA	8724270	8724485	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_8724300_8724500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010082	chr10	+	198	1	Intergenic	novelGene_344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGGCAGGAAGGGGTTG	NA	False	NA	NA	False	NA	NA	NA	8744143	8744341	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_8744100_8744300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010088	chr10	+	186	1	Intergenic	novelGene_345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGTGTATTGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	8822012	8822198	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_8822000_8822200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010096	chr10	+	2698	1	Antisense	novelGene_ENSMUSG00000019790.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCTTTACCCAAGAATAAA	NA	False	NA	NA	False	AATAAA	-21	NA	9655891	9658589	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr10_+_9655900_9658600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010098	chr10	+	6905	30	FSM	ENSMUSG00000090112.9	ENSMUST00000044053.13	9271	30	45	2321	2	977	multi-exon	TRUE	canonical	3	69	junction_26	12.375515699268	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGATTGTTTTATTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	11025218	11091018	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010112	chr10	+	5086	3	FSM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	-24	-2	-24	2	multi-exon	FALSE	canonical	3	746	junction_2	70.5	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTTTGTTTTGTTTTTT	7568	False	NA	NA	False	AATAAA	-27	NA	11157049	11173798	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_11157245_11165263_11167317_11170960
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010123	chr10	+	1244	1	FSM	ENSMUSG00000045455.9	ENSMUST00000052902.9	613	1	14	-645	14	645	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATCTGCATTGATTTCC	NA	False	NA	NA	False	NA	NA	NA	11484980	11486224	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_11485000_11486200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010126	chr10	-	5773	25	FSM	ENSMUSG00000019820.12	ENSMUST00000219003.2	5751	25	-19	-3	-19	1	multi-exon	TRUE	canonical	3	61	junction_24	17.9698339045066	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGATGTTTGGCTGTGTT	NA	False	NA	0	True	AATAAA	-22	NA	12424642	12257930	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_12259941_12261261_12261285_12277054_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12423690
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010130	chr10	-	4940	25	FSM	ENSMUSG00000019820.12	ENSMUST00000217994.2	3161	25	221	-2000	221	0	multi-exon	FALSE	canonical	3	18	junction_24	24.236536927173	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGATGTTTGGCTGTGT	NA	False	NA	-1	True	AATAAA	-21	NA	12490354	12257931	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_12259941_12261261_12261285_12277054_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12490234
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010139	chr10	+	192	1	Intergenic	novelGene_346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACATAAAGGAATCTTTAA	NA	False	NA	NA	False	NA	NA	NA	12318126	12318318	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_12318100_12318300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010142	chr10	+	189	1	Intergenic	novelGene_347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATAGTAAACACTTGAAT	NA	False	NA	NA	False	NA	NA	NA	12554807	12554996	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_12554800_12555000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010146	chr10	+	196	1	Intergenic	novelGene_348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAAGAGAGTCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	12658743	12658939	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_12658700_12658900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010151	chr10	+	762	1	FSM	ENSMUSG00000078348.5	ENSMUST00000105139.5	3841	1	3082	-3	3082	3	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTATGGATTGCTGTGT	NA	False	NA	26	True	TATAAA	-21	NA	12884168	12884930	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_12884200_12884900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010161	chr10	-	165	1	Intergenic	novelGene_349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTTTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12887218	12887053	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_12887100_12887200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010243	chr10	+	1958	2	FSM	ENSMUSG00000039910.11	ENSMUST00000038107.9	1979	2	3	18	3	13	multi-exon	FALSE	canonical	3	306	junction_1	0	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTTCTAAAAGTCAGT	NA	False	NA	NA	False	AATAAA	-16	NA	17598968	17601404	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_17599208_17599685
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010252	chr10	-	5121	4	FSM	ENSMUSG00000039879.10	ENSMUST00000037879.8	5098	4	-23	0	-23	0	multi-exon	FALSE	canonical	3	53	junction_3	19.3045763140937	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATTTTAGATTTTGT	NA	False	NA	-11	True	AATAAA	-22	NA	17823838	17774782	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_17778126_17783781_17783937_17790739_17791781_17823256
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010262	chr10	-	758	3	FSM	ENSMUSG00000078453.4	ENSMUST00000020002.9	846	3	88	0	18	0	multi-exon	FALSE	canonical	3	143	junction_1	12	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGGTGGCTGTGTTTT	NA	False	NA	-4	True	AATAAA	-22	NA	17898948	17887007	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_17887565_17894586_17894654_17898814
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010274	chr10	+	3012	20	FSM	ENSMUSG00000019854.18	ENSMUST00000126390.8	2595	20	-400	-17	-321	5	multi-exon	FALSE	canonical	3	129	junction_9	41.6677266716506	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTATTTGTTGGCGAGC	NA	False	NA	19	True	AATAAA	-30	NA	17931287	18000897	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_17931864_17965195_17965320_17968592_17968790_17968917_17969072_17969526_17969652_17970157_17970321_17970592_17970657_17971929_17972085_17979901_17980024_17983415_17983497_17990146_17990235_17991463_17991566_17993412_17993483_17994674_17994794_17995912_17995978_17996780_17996967_17998182_17998279_17998772_17998922_17999346_17999453_18000627
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010287	chr10	-	1170	6	FSM	ENSMUSG00000059554.13	ENSMUST00000080860.13	1190	6	20	0	2	0	multi-exon	FALSE	canonical	3	48	junction_2	8.9977775033616	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTTTTCTGTTTAGAA	NA	False	NA	0	True	AATAAA	-21	NA	18110724	18089423	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_18089927_18092007_18092031_18095235_18095391_18100644_18100809_18106166_18106367_18110599
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010305	chr10	-	182	1	Intergenic	novelGene_350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAGGGCAAGTGATACA	NA	False	NA	NA	False	NA	NA	NA	18396032	18395850	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_18395800_18396000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010306	chr10	-	1123	4	FSM	ENSMUSG00000019853.7	ENSMUST00000020000.7	2535	4	152	1260	-37	0	multi-exon	FALSE	canonical	3	26	junction_2	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCCTTGCCTCCGCTGTT	NA	False	NA	NA	False	AGTAAA	-22	NA	18421672	18416505	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_18417081_18420012_18420194_18420825_18420962_18421441
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010324	chr10	-	175	1	Intergenic	novelGene_351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	299	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAATTTAGTGTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	19443346	19443171	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_19443200_19443300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010344	chr10	+	211	1	Intergenic	novelGene_352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCTAGCTAGAGTTAGAA	4187	False	NA	NA	False	NA	NA	NA	19961307	19961518	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_19961300_19961500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010349	chr10	+	206	1	Intergenic	novelGene_353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGCTGAGCACAGAAGC	NA	False	NA	NA	False	NA	NA	NA	20007246	20007452	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_20007200_20007500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010355	chr10	+	3902	18	FSM	ENSMUSG00000019996.18	ENSMUST00000020173.16	4252	18	418	-68	-95	0	multi-exon	FALSE	canonical	3	234	junction_11	29.0770364453276	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTCCTGTGGTTTCACTT	NA	False	NA	15	True	AATAAA	-24	NA	20024634	20157336	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010374	chr10	+	2605	9	ISM	ENSMUSG00000037608.17	ENSMUST00000186100.7	3231	13	-5	7865	-2	143	intron_retention	FALSE	canonical	3	760	junction_3	88.238225135142	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTGTCTTTTACACGG	2788	False	NA	NA	False	ATTAAA	-23	NA	20188212	20208147	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010375	chr10	+	5309	12	FSM	ENSMUSG00000037608.17	ENSMUST00000092678.10	5307	12	-2	0	-2	0	multi-exon	FALSE	canonical	3	294	junction_10	195.138687701892	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGGTCTCTGTTTGCCT	2788	False	NA	16	True	AATAAA	-17	NA	20188212	20218247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010379	chr10	+	3085	12	NIC	ENSMUSG00000037608.17	novel	3164	13	NA	NA	-2	17	combination_of_known_junctions	FALSE	canonical	3	221	junction_3	266.237450718882	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTAAAAACATTTGACTG	2788	False	NA	29	True	AATAAA	-37	NA	20188212	20216029	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010382	chr10	+	5450	13	FSM	ENSMUSG00000037608.17	ENSMUST00000185800.7	3142	13	-70	-2238	-2	0	multi-exon	FALSE	canonical	3	221	junction_3	210.967743716638	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGGTCTCTGTTTGCCT	2788	False	NA	16	True	AATAAA	-17	NA	20188212	20218247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010424	chr10	+	191	1	Intergenic	novelGene_354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATTAAAAATGATTTATTT	NA	False	NA	NA	False	NA	NA	NA	20247052	20247243	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_20247100_20247200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010425	chr10	+	216	1	Intergenic	novelGene_355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACACCAGGAAAAAAAGGT	NA	False	NA	NA	False	NA	NA	NA	20753686	20753902	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_20753700_20753900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010443	chr10	-	177	1	Intergenic	novelGene_356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCTTATTACCTTTTGA	6953	False	NA	NA	False	NA	NA	NA	21146005	21145828	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_21145800_21146000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010445	chr10	+	2791	18	FSM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	-43	-15	11	0	multi-exon	FALSE	canonical	3	828	junction_14	97.3053197904183	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTTATTTCTTAGACA	NA	False	NA	27	True	AATAAA	-29	NA	21171888	21244797	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010455	chr10	+	2806	18	NNC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	2	6	at_least_one_novel_splicesite	FALSE	canonical	3	88	junction_17	229.173164005618	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAAAAATGTGTTTTATT	NA	False	NA	18	True	AATAAA	-20	NA	21171909	21244788	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243731_21244187
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010458	chr10	+	2752	18	FSM	ENSMUSG00000019977.17	ENSMUST00000020153.10	2793	18	32	9	2	6	multi-exon	FALSE	canonical	3	89	junction_4	231.196571495514	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAAAAATGTGTTTTATT	NA	False	NA	18	True	AATAAA	-20	NA	21171909	21244788	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212874_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010503	chr10	+	2632	12	FSM	ENSMUSG00000019970.16	ENSMUST00000164659.8	2602	12	-25	-5	-25	0	multi-exon	FALSE	canonical	3	251	junction_1	208.20654874943	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATGTGTTAACTTT	NA	False	NA	18	True	AATAAA	-24	NA	21854545	21875802	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_21854882_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010514	chr10	+	2481	12	FSM	ENSMUSG00000019970.16	ENSMUST00000100036.10	2476	12	0	-5	0	0	multi-exon	FALSE	canonical	3	40	junction_1	266.915376443206	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATGTGTTAACTTT	NA	False	NA	18	True	AATAAA	-24	NA	21868121	21875802	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_21868307_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010522	chr10	+	2440	12	FSM	ENSMUSG00000019970.16	ENSMUST00000020145.12	2456	12	16	0	-1	0	multi-exon	FALSE	canonical	3	717	junction_1	88.4218850289119	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATGTGTTAACTTT	NA	False	NA	18	True	AATAAA	-24	NA	21870580	21875802	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_21870725_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010532	chr10	-	180	1	Intergenic	novelGene_357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGAATATCTTGTTTGTA	NA	False	NA	NA	False	NA	NA	NA	21885348	21885168	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_21885200_21885300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010546	chr10	-	2812	7	FSM	ENSMUSG00000071359.14	ENSMUST00000127698.8	2873	7	70	-9	-16	9	multi-exon	FALSE	canonical	3	232	junction_1	20.3367483471014	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTCCCCCTTTTTATTTT	NA	False	NA	2	True	AATAAA	-30	NA	22607276	22579768	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_22581795_22583487_22583583_22583669_22583774_22585044_22585109_22585255_22585339_22587812_22587991_22607014
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010551	chr10	-	2639	7	NNC	ENSMUSG00000071359.14	novel	2873	7	NA	NA	45	2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_6	90.384364429548	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAAGTATTCCCCCTTT	NA	False	NA	-5	True	AATAAA	-23	NA	22607215	22579775	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_-_22581795_22583487_22583583_22583669_22583774_22585044_22585109_22585255_22585339_22587812_22587886_22607014
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010561	chr10	-	512	6	FSM	ENSMUSG00000061983.8	ENSMUST00000218107.2	584	6	72	0	-1	0	multi-exon	FALSE	canonical	3	2594	junction_5	774.773670177298	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTTTGCTGGTATAA	NA	False	NA	-3	True	AATAAA	-28	NA	23663101	23661080	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_23661172_23661473_23661576_23661799_23661903_23662661_23662779_23662891_23662943_23663053
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010591	chr10	+	199	1	Intergenic	novelGene_358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGATGAGTGCAGAGG	NA	False	NA	NA	False	NA	NA	NA	23690818	23691017	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_23690800_23691000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010603	chr10	+	2186	10	FSM	ENSMUSG00000019998.7	ENSMUST00000220041.2	3435	10	-12	1261	-2	0	multi-exon	FALSE	canonical	3	188	junction_6	15.4632180063243	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAGTCCCAAGAACTCT	NA	False	NA	23	True	AATAAA	-25	NA	24025212	24064859	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_24025307_24031132_24031283_24053063_24053134_24055014_24055109_24055823_24055962_24056760_24056814_24057415_24057513_24058666_24058740_24060884_24060968_24063525
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010610	chr10	+	2344	5	FSM	ENSMUSG00000019997.12	ENSMUST00000020171.12	2398	5	59	-5	59	0	multi-exon	FALSE	canonical	3	24	junction_4	4.81534007106456	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGGCTGTTCATTCTTG	NA	False	NA	10	True	AATAAA	-26	NA	24471398	24474581	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_24471687_24471773_24471997_24472244_24472497_24472629_24472842_24473212
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010619	chr10	+	189	1	Intergenic	novelGene_359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATACAGACACTGGTATGC	2110	False	NA	NA	False	NA	NA	NA	24642869	24643058	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_24642900_24643100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010621	chr10	-	205	1	Intergenic	novelGene_360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAAACATTGTGGCAGAT	9727	False	NA	NA	False	AAAACA	-7	NA	24914544	24914339	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_24914300_24914500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010629	chr10	-	205	1	Intergenic	novelGene_361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGGGGGGGGGGACAGAGA	NA	False	NA	NA	False	NA	NA	NA	24933152	24932947	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_24932900_24933200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010635	chr10	-	2309	8	NIC	ENSMUSG00000039166.17	novel	2092	8	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_5	10.3430939199417	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTCTTCTTTTCTTTCC	NA	False	NA	0	True	AATAAA	-19	NA	25172981	25044987	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_25046301_25096508_25096657_25115523_25115637_25143205_25143367_25147402_25147540_25159790_25159940_25165496_25165629_25172825
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010652	chr10	+	187	1	Intergenic	novelGene_362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCAATCAGTTCACAATG	NA	False	NA	NA	False	NA	NA	NA	25160747	25160934	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_25160700_25160900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010653	chr10	+	4188	18	FSM	ENSMUSG00000019978.17	ENSMUST00000218903.2	4115	18	-67	-6	-9	0	multi-exon	FALSE	canonical	3	273	junction_1	40.1674694938122	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	25235686	25399417	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010675	chr10	+	4050	18	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-14816	0	intron_retention	TRUE	canonical	3	44	junction_1	79.0900236054462	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTGTCACTTCTCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	25259740	25399413	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_+_25259800_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010684	chr10	-	184	1	Intergenic	novelGene_363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTTTTAAATTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	25751734	25751550	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_25751600_25751700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010700	chr10	+	201	1	Intergenic	novelGene_364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACCAATGCTACTCGACA	4406	False	NA	NA	False	NA	NA	NA	26782911	26783112	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_26782900_26783100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010705	chr10	+	187	1	Intergenic	novelGene_365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATAAGCTCTTGGCGTG	NA	False	NA	NA	False	NA	NA	NA	27449060	27449247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_27449100_27449200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010756	chr10	-	629	1	FSM	ENSMUSG00000069682.7	ENSMUST00000092620.6	635	1	0	6	0	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAGTGGAAAAAAAAAATCA	NA	False	NA	-14	True	AATAAA	-15	NA	29575376	29574747	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_29574700_29575400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010766	chr10	+	195	1	Intergenic	novelGene_366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTTTTTATGAAATTACC	NA	False	NA	NA	False	NA	NA	NA	30034796	30034991	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_30034800_30035000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010769	chr10	+	186	1	Intergenic	novelGene_367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATACACAAAAGTCAGTA	NA	False	NA	NA	False	NA	NA	NA	30062020	30062206	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_30062000_30062200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010788	chr10	-	1835	13	FSM	ENSMUSG00000019792.9	ENSMUST00000019927.7	2359	13	37	487	-17	3	multi-exon	FALSE	canonical	3	159	junction_10	17.7080882335979	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATACTCAGTATTTCTC	NA	False	NA	1	True	AATAAA	-26	NA	30476708	30410707	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30463434_30463592_30466020_30466156_30466838_30466932_30467016_30467099_30470110_30470185_30473735_30473802_30476585
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010810	chr10	+	857	6	FSM	ENSMUSG00000000295.14	ENSMUST00000000304.14	858	6	3	-2	3	2	multi-exon	FALSE	canonical	3	475	junction_4	15.6025638918737	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTGTTTTGCAT	NA	False	NA	22	True	ATTAAA	-29	NA	31189381	31204202	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_31189480_31190510_31190633_31192288_31192392_31196263_31196333_31202017_31202157_31203876
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010829	chr10	+	206	1	Intergenic	novelGene_368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCCCTTCCGCTCCACT	NA	False	NA	NA	False	NA	NA	NA	31281182	31281388	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_31281200_31281400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010833	chr10	-	2858	6	FSM	ENSMUSG00000063760.10	ENSMUST00000081989.8	11013	6	-539	8694	-539	-8694	multi-exon	FALSE	canonical	3	16	junction_4	4.8	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTTCCATGGTAACTG	NA	False	NA	NA	False	ATTAAA	-17	NA	31485719	31377882	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_31378728_31379746_31379819_31381768_31381971_31393379_31393545_31410658_31410893_31484379
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010839	chr10	-	187	1	Intergenic	novelGene_369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTCCTGATGCTAATTAT	NA	False	NA	NA	False	NA	NA	NA	32680282	32680095	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_32680100_32680300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010845	chr10	+	246	1	Intergenic	novelGene_370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	314	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACACCATAATCATTAT	NA	False	NA	NA	False	NA	NA	NA	33254320	33254566	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_33254300_33254600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010855	chr10	+	185	1	Intergenic	novelGene_371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATAACTTTTTCAATTT	9896	False	NA	NA	False	NA	NA	NA	33374344	33374529	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_33374300_33374500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010868	chr10	+	181	1	Intergenic	novelGene_372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTAAACGCCAATGCATA	NA	False	NA	NA	False	NA	NA	NA	33833390	33833571	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_33833400_33833600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010870	chr10	-	1102	7	FSM	ENSMUSG00000019782.11	ENSMUST00000019917.6	1090	7	-9	-3	-9	3	multi-exon	FALSE	canonical	3	1217	junction_2	78.0243907733701	314	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTACTTCCTCTTATTG	NA	False	NA	-20	True	AATAAA	-26	NA	33895629	33872547	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_33872845_33877132_33877196_33877653_33877787_33878419_33878564_33884988_33885120_33888067_33888134_33895361
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010878	chr10	-	1718	2	FSM	ENSMUSG00000049872.9	ENSMUST00000069125.8	5323	2	4	3601	4	-3601	multi-exon	FALSE	canonical	3	31	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTTTTCTGGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	33972511	33967411	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_33968512_33971893
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010900	chr10	-	3895	6	NNC	ENSMUSG00000039497.9	novel	4389	6	NA	NA	-145	3	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_4	68.2026392451201	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCCTGCTCTGGTGTGC	NA	False	NA	-7	True	AATAAA	-17	NA	34083218	34027385	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_-_34029971_34031904_34032113_34035964_34036205_34038731_34038986_34059691_34060157_34083075
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010903	chr10	+	212	1	Intergenic	novelGene_373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	215	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTAAATGTGGCTGAAG	NA	False	NA	NA	False	TTTAAA	-10	NA	34097784	34097996	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_34097800_34098000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010924	chr10	-	2747	12	FSM	ENSMUSG00000039480.15	ENSMUST00000105512.8	2727	12	-20	0	-7	0	multi-exon	FALSE	canonical	3	28	junction_7	20.4676725553911	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTTGTATTATTGAATA	NA	False	NA	-1	True	AATAAA	-17	NA	34294555	34179604	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274192_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010937	chr10	+	152	1	Intergenic	novelGene_374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAAGCCAGTAGAA	5402	False	NA	NA	False	NA	NA	NA	34290310	34290462	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_34290300_34290500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010957	chr10	+	187	1	Intergenic	novelGene_375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTTTTAAAAAAAAAGTTG	NA	False	NA	NA	False	NA	NA	NA	36892786	36892973	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_36892800_36893000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010964	chr10	+	178	1	Intergenic	novelGene_376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAGAAAGAAAGAA	6406	False	NA	NA	False	NA	NA	NA	37003458	37003636	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_37003500_37003600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010967	chr10	-	4231	2	FSM	ENSMUSG00000069662.6	ENSMUST00000092584.6	4048	2	-45	-138	-45	138	multi-exon	FALSE	canonical	3	339	junction_1	0	262	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTACTAAAGTAGGGTGTT	NA	False	NA	NA	False	AATAAA	-24	NA	37014961	37009232	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_37012932_37014429
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010986	chr10	+	2093	12	FSM	ENSMUSG00000019845.9	ENSMUST00000019991.8	2929	12	-20	856	-20	105	multi-exon	FALSE	canonical	3	143	junction_3	7.58423767804153	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAAACGGCTGCTACGG	NA	False	NA	16	True	AATAAA	-16	NA	39009998	39026198	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020559_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010994	chr10	+	2612	14	FSM	ENSMUSG00000019843.15	ENSMUST00000063091.13	3562	14	-8	958	-8	0	multi-exon	FALSE	canonical	3	31	junction_8	31.8009712925239	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGGACAGGTGTTTGG	NA	False	NA	NA	False	AATAAA	-27	NA	39245751	39440419	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405914_39406071_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000010997	chr10	+	3578	14	FSM	ENSMUSG00000019843.15	ENSMUST00000099967.10	3528	14	-41	-9	-7	0	multi-exon	FALSE	canonical	3	82	junction_9	15.9414609592343	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTATTTGTGTACA	NA	False	NA	NA	False	ATTAAA	-30	NA	39245752	39441377	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405432_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011004	chr10	-	1874	2	Antisense	novelGene_ENSMUSG00000019843.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGACATTTACTCATGTA	NA	False	NA	2	True	AATAAA	-21	NA	39379306	39377092	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr10_-_39378860_39379199
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011010	chr10	+	2081	9	FSM	ENSMUSG00000019842.7	ENSMUST00000019987.7	2867	9	304	482	304	0	multi-exon	FALSE	canonical	3	53	junction_2	7.56534037568701	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTTTATCTCAGTGG	NA	False	NA	5	True	AATAAA	-18	NA	39489233	39530821	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_39489343_39501845_39502656_39510530_39510721_39515215_39515395_39517301_39517391_39521703_39521773_39522844_39522962_39526901_39526977_39530378
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011018	chr10	-	179	1	Intergenic	novelGene_377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGTTACATAGCAA	NA	False	NA	NA	False	NA	NA	NA	39642414	39642235	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_39642200_39642400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011019	chr10	-	227	1	Intergenic	novelGene_378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	AAGAAA	-28	NA	39676793	39676566	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_39676600_39676800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011025	chr10	+	200	1	Intergenic	novelGene_379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGGGCATTTTAAAGTG	NA	False	NA	NA	False	NA	NA	NA	39777078	39777278	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_39777100_39777300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011029	chr10	+	193	1	Intergenic	novelGene_380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATAGGTCTGTGGACTTTC	NA	False	NA	NA	False	NA	NA	NA	39854539	39854732	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_39854500_39854700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011039	chr10	-	5395	6	FSM	ENSMUSG00000019838.12	ENSMUST00000092566.8	5397	6	2	0	2	0	multi-exon	FALSE	canonical	3	11	junction_2	3.87814388593306	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTGTGATTGTGTTTCT	7145	False	NA	NA	False	AATAAA	-22	NA	40018248	39909527	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_39913401_39916594_39916824_39932482_39932627_39952559_39953014_39956658_39956804_40017698
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011044	chr10	+	197	1	Intergenic	novelGene_381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAATTTATTCAGAGGT	NA	False	NA	NA	False	NA	NA	NA	40092394	40092591	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_40092400_40092600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011061	chr10	-	2547	6	FSM	ENSMUSG00000019837.9	ENSMUST00000217537.2	2526	6	-14	-7	-9	7	multi-exon	FALSE	canonical	3	403	junction_5	105.423716496811	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGATGGTTGCATCTAAAT	8572	False	NA	-24	True	AATAAA	-22	NA	40133681	40123691	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133574
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011064	chr10	-	2542	6	FSM	ENSMUSG00000019837.9	ENSMUST00000019982.9	887	6	-6	-1649	-6	2	multi-exon	FALSE	canonical	3	216	junction_5	179.465205541353	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAGTTGATGGTTGCATC	8575	False	NA	-29	True	AATAAA	-17	NA	40133678	40123696	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133571
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011082	chr10	-	3207	8	FSM	ENSMUSG00000075232.7	ENSMUST00000238969.2	3206	8	-1	0	-1	0	multi-exon	FALSE	canonical	3	315	junction_3	48.542848734549	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGTTTTCTGTTTGGTGT	NA	False	NA	-5	True	AATAAA	-29	NA	40178185	40163453	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_40165466_40166113_40166270_40166373_40166612_40167989_40168033_40169159_40169263_40170176_40170304_40170712_40170800_40177744
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011097	chr10	+	189	1	Intergenic	novelGene_382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACCTTTGATAGCCCACA	NA	False	NA	NA	False	NA	NA	NA	40234816	40235005	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_40234800_40235000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011101	chr10	-	237	1	Intergenic	novelGene_383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTGTCCTAAACACATAC	NA	False	NA	NA	False	AAAAAG	-14	NA	40306129	40305892	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_40305900_40306100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011105	chr10	+	209	1	Intergenic	novelGene_384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATAGAGGATAAAAAGCCA	NA	False	NA	NA	False	NA	NA	NA	40325076	40325285	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_40325100_40325300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011129	chr10	+	2738	9	FSM	ENSMUSG00000019831.15	ENSMUST00000105509.2	2719	9	-20	1	-20	0	multi-exon	FALSE	canonical	3	202	junction_5	32.5209067370515	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTGTCGCTCTTCGAG	NA	False	NA	17	True	AATAAA	-19	NA	40759802	40814565	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_40760067_40796243_40796405_40802479_40802615_40806626_40806781_40807911_40808030_40809108_40809282_40810472_40810653_40812105_40812735_40813641
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011141	chr10	-	3303	23	FSM	ENSMUSG00000038417.5	ENSMUST00000043814.5	3282	23	-10	-11	-10	11	multi-exon	FALSE	canonical	3	326	junction_19	28.6394298502739	428	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGACTTATTTTAGGAG	NA	False	NA	-14	True	AATAAA	-28	NA	41179266	41064156	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_41064696_41096894_41096982_41102917_41103001_41104102_41104299_41106002_41106087_41108102_41108251_41109547_41109607_41116500_41116640_41127712_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134145_41139064_41139163_41139880_41140044_41141381_41141483_41143682_41143812_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011150	chr10	+	179	1	Intergenic	novelGene_385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAGATATAAATT	NA	False	NA	NA	False	NA	NA	NA	41167678	41167857	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_41167700_41167900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011162	chr10	-	193	1	Intergenic	novelGene_386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTTTCAGGCGAGAGGAA	NA	False	NA	NA	False	NA	NA	NA	41290999	41290806	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_41290800_41291000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011184	chr10	+	3402	23	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_3	52.4446973581861	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTATGCTCTGTGCT	9115	False	NA	29	True	AATAAA	-18	NA	41352331	41363026	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_+_41352537_41354005_41354311_41354958_41355064_41355321_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011185	chr10	+	3333	23	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	71	junction_2	35.4241128130973	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTATGCTCTGTGCT	9115	False	NA	29	True	AATAAA	-18	NA	41352331	41363026	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_+_41352537_41354005_41354311_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011186	chr10	+	3541	24	FSM	ENSMUSG00000019823.18	ENSMUST00000019967.16	3563	24	22	0	0	0	multi-exon	FALSE	canonical	3	135	junction_2	27.5095446574272	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTATGCTCTGTGCT	9115	False	NA	29	True	AATAAA	-18	NA	41352331	41363026	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_41352537_41354005_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011200	chr10	-	1649	10	FSM	ENSMUSG00000019822.13	ENSMUST00000019965.13	1602	10	-47	0	-18	0	multi-exon	FALSE	canonical	3	150	junction_9	17.8020667408847	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTCTACCTTGTTCCTT	NA	False	NA	0	True	AATAAA	-20	NA	41366383	41363167	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_41363579_41363667_41363822_41363988_41364094_41364172_41364306_41364428_41364512_41364729_41364820_41364926_41365021_41365270_41365348_41365459_41365557_41365978
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011208	chr10	+	2922	6	FSM	ENSMUSG00000019818.16	ENSMUST00000019962.15	2922	6	0	0	0	0	multi-exon	FALSE	canonical	3	1648	junction_4	8.82269800004511	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATATTTTGATTATGA	NA	False	NA	20	True	AATAAA	-25	NA	41395409	41407044	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404667
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011216	chr10	+	2885	6	NNC	ENSMUSG00000019818.16	novel	2922	6	NA	NA	28	-6	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_5	639.254753599846	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGTGTCATATTTTGA	NA	False	NA	14	True	AATAAA	-19	NA	41395437	41407038	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404670
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011235	chr10	+	187	1	Intergenic	novelGene_387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCCTTCTTATACTTCT	NA	False	NA	NA	False	NA	NA	NA	41573792	41573979	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_41573800_41574000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011240	chr10	-	2157	11	NIC	ENSMUSG00000019813.17	novel	2255	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_8	61.0777373516734	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGAAATATTCTGGG	367	False	NA	4	True	AATAAA	-25	NA	41685626	41594836	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616910_41619037_41619218_41621766_41621918_41685568
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011241	chr10	-	2220	11	FSM	ENSMUSG00000019813.17	ENSMUST00000019951.16	2177	11	-38	-5	-15	0	multi-exon	FALSE	canonical	3	114	junction_4	38.3583107031579	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGAAATATTCTGGG	352	False	NA	4	True	AATAAA	-25	NA	41685641	41594836	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685568
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011243	chr10	-	2249	11	NIC	ENSMUSG00000019813.17	novel	2255	12	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_10	60.7736785129878	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGAAATATTCTGGG	108	False	NA	4	True	AATAAA	-25	NA	41685885	41594836	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685783
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011246	chr10	-	2397	11	NNC	ENSMUSG00000019813.17	novel	2255	12	NA	NA	-5623	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_10	58.0965575572254	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGAAATATTCTGGG	5889	False	NA	4	True	AATAAA	-25	NA	41628257	41594836	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41628007
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011283	chr10	-	6852	4	FSM	ENSMUSG00000048756.12	ENSMUST00000105502.8	6848	4	-3	-1	0	1	multi-exon	FALSE	canonical	3	109	junction_3	10.6562449087639	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCAGGAGTCTGTCATCA	NA	False	NA	-1	True	AATAAA	-23	NA	42152751	42057835	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_42062292_42072461_42073898_42150811_42151542_42152521
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011314	chr10	+	197	1	Intergenic	novelGene_388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTTCATCTCAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	42306780	42306977	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_42306800_42307000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011320	chr10	+	194	1	Intergenic	novelGene_389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAAAGATCTGCCTGCCT	NA	False	NA	NA	False	NA	NA	NA	42318485	42318679	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_42318500_42318700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011327	chr10	+	1426	4	FSM	ENSMUSG00000019804.13	ENSMUST00000019939.12	1401	4	-24	-1	-23	1	multi-exon	FALSE	canonical	3	2006	junction_3	141.176800108548	494	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTGCTCTGGTTGCA	NA	False	NA	13	True	AATAAA	-14	NA	42378002	42411367	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_42378489_42401949_42402046_42409144_42409270_42410648
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011342	chr10	+	182	1	Intergenic	novelGene_390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCCCTGAGGAGATGC	NA	False	NA	NA	False	NA	NA	NA	42523895	42524077	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_42523900_42524100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011343	chr10	+	185	1	Intergenic	novelGene_391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAAAGTCTCTTCAGAGG	1262	False	NA	NA	False	NA	NA	NA	42536370	42536555	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_42536400_42536600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011353	chr10	+	3032	6	FSM	ENSMUSG00000038280.13	ENSMUST00000040718.6	3006	6	-20	-6	-20	6	multi-exon	FALSE	canonical	3	210	junction_2	7.54718490564528	284	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTAATTGAATTTTTAT	NA	False	NA	15	True	AATAAA	-24	NA	42554891	42578461	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_42555394_42559155_42559271_42568906_42569005_42572245_42572414_42574103_42574270_42576478
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011374	chr10	+	191	1	Intergenic	novelGene_392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAACTGTGGATTTT	NA	False	NA	NA	False	NA	NA	NA	42699418	42699609	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_42699400_42699600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011391	chr10	+	221	1	Intergenic	novelGene_393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGACTAAACCTCTGAAACT	NA	False	NA	NA	False	NA	NA	NA	43399794	43400015	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_43399800_43400000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011394	chr10	+	561	1	FSM	ENSMUSG00000045886.8	ENSMUST00000057649.8	563	1	0	2	0	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTCGGTGGTCATGGTG	NA	False	NA	NA	False	AATAAA	-44	NA	43400079	43400640	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_43400100_43400600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011430	chr10	+	3004	9	FSM	ENSMUSG00000019864.15	ENSMUST00000054418.12	2981	9	-19	-4	-19	4	multi-exon	FALSE	canonical	3	128	junction_8	16.985287751463	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTTGGTCACTGTTTT	NA	False	NA	12	True	NA	NA	NA	43777783	43823862	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_43778533_43783754_43783907_43785902_43785972_43786788_43786914_43797382_43797432_43804318_43804456_43808358_43808543_43811994_43812088_43822416
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011444	chr10	+	2367	8	FSM	ENSMUSG00000038160.8	ENSMUST00000039286.5	2352	8	-7	-8	-7	8	multi-exon	FALSE	canonical	3	249	junction_3	36.7828709025918	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGGCTCAAGTGAGGT	NA	False	NA	NA	False	AATAAA	-26	NA	44144346	44240295	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_44144581_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44238911
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011454	chr10	-	3372	3	ISM	ENSMUSG00000038151.14	ENSMUST00000039174.11	5281	8	17516	-3	15978	3	3prime_fragment	FALSE	canonical	3	47	junction_2	4	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATGCTTGTCTAGTGTCT	NA	False	NA	-4	True	ATTAAA	-21	NA	44317228	44313169	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr10_-_44316239_44316654_44316784_44317054
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011492	chr10	+	3695	24	FSM	ENSMUSG00000038822.16	ENSMUST00000037044.13	3785	24	17	73	17	1	multi-exon	FALSE	canonical	3	100	junction_19	16.6879511224538	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTTTATTTGATCTAA	1795	False	NA	9	True	AATAAA	-21	NA	45453941	45588368	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011498	chr10	+	801	1	FSM	ENSMUSG00000110841.2	ENSMUST00000217344.2	782	1	-16	-3	-2	3	mono-exon	FALSE	NA	NA	NA	NA	NA	445	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGATACACAAAATGACA	NA	False	NA	NA	False	AATAAA	-37	NA	45751384	45752185	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_45751400_45752200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011508	chr10	+	192	1	Intergenic	novelGene_394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCTGCCATGGAGGGCCA	NA	False	NA	NA	False	NA	NA	NA	45822868	45823060	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_45822900_45823100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011514	chr10	+	212	1	Intergenic	novelGene_395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAAGCCGGGCGTGGTG	NA	False	NA	NA	False	NA	NA	NA	46676293	46676505	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_46676300_46676500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011520	chr10	+	193	1	Intergenic	novelGene_396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAGAAAGTAAGGTATGT	NA	False	NA	NA	False	NA	NA	NA	48155909	48156102	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_48155900_48156100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011531	chr10	+	212	1	Intergenic	novelGene_397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATTTATAAAATCACCA	NA	False	NA	NA	False	NA	NA	NA	49453856	49454068	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_49453900_49454100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011537	chr10	+	191	1	Intergenic	novelGene_398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTTATGCTATTCCAGA	NA	False	NA	NA	False	NA	NA	NA	49738855	49739046	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_49738900_49739000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011546	chr10	+	190	1	Intergenic	novelGene_399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATAATTCTTGGCTCTT	799	False	NA	NA	False	NA	NA	NA	50903893	50904083	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_50903900_50904100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011554	chr10	+	186	1	Intergenic	novelGene_400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTATATCAGCCATCCT	NA	False	NA	NA	False	NA	NA	NA	52090032	52090218	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_52090000_52090200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011556	chr10	+	3047	11	FSM	ENSMUSG00000019891.16	ENSMUST00000069004.14	3024	11	-21	-2	-21	0	multi-exon	TRUE	canonical	3	170	junction_2	11.5134703716994	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTGACTTCTATTTGGC	NA	False	NA	8	True	AATAAA	-18	NA	52109693	52197474	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_52109932_52137822_52138036_52160198_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52188909_52188998_52190450_52190501_52193127_52193248_52195571
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011572	chr10	-	4289	8	FSM	ENSMUSG00000019861.16	ENSMUST00000020008.10	4216	8	-74	1	-25	-1	multi-exon	FALSE	canonical	3	117	junction_5	13.2125481483107	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGGTTTATTATGGG	NA	False	NA	-28	True	AATAAA	-25	NA	52258245	52213148	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_52215950_52222144_52222326_52225167_52225333_52226696_52226793_52229422_52229589_52230667_52230844_52234868_52235034_52257706
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011634	chr10	+	2628	12	FSM	ENSMUSG00000019878.9	ENSMUST00000079833.6	2604	12	-19	-5	-8	5	multi-exon	FALSE	canonical	3	174	junction_10	23.7006119808005	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTCTCATTGTTGCAAA	NA	False	NA	18	True	NA	NA	NA	57362472	57389236	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_57362698_57371993_57372103_57372250_57372379_57373592_57373718_57375511_57375588_57377465_57377528_57378718_57378807_57380677_57380827_57381241_57381479_57382292_57382399_57387539_57387625_57387998
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011643	chr10	+	2389	13	NIC	ENSMUSG00000019878.9	novel	2430	14	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	28	junction_11	71.7650487509221	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATTGTTTGTTGAGTCG	NA	False	NA	16	True	AATAAA	-17	NA	57362492	57388963	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_+_57362698_57371993_57372103_57372250_57372379_57373592_57373718_57375511_57375588_57377465_57377528_57378718_57378807_57380677_57380827_57381241_57381479_57382292_57382399_57385156_57385211_57387539_57387625_57387998
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011667	chr10	+	189	1	Intergenic	novelGene_401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATTCCAAATAATAATGT	NA	False	NA	NA	False	NA	NA	NA	58139587	58139776	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_58139600_58139800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011692	chr10	+	2477	16	FSM	ENSMUSG00000038010.10	ENSMUST00000036576.10	2455	16	-22	0	-22	0	multi-exon	FALSE	canonical	3	28	junction_12	10.0598210719674	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTAGAGTCCCTTCTTT	921	False	NA	NA	False	AATAAA	-24	NA	58333747	58412066	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_58333885_58334990_58335036_58335183_58335242_58343342_58343464_58345326_58345455_58348900_58349080_58359959_58360119_58363163_58363284_58364144_58364223_58364726_58364835_58374070_58374233_58376619_58376737_58380738_58380932_58397722_58397900_58409410_58409550_58411510
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011702	chr10	+	205	1	Intergenic	novelGene_402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAACCTGGGTCTGGTTCC	28	False	NA	NA	False	NA	NA	NA	58394416	58394621	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_58394400_58394600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011720	chr10	+	189	1	Intergenic	novelGene_403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGCAAGCTTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	59102775	59102964	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_59102800_59103000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011728	chr10	-	179	1	Intergenic	novelGene_404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAAAGAAGTGTCTGTGC	NA	False	NA	NA	False	NA	NA	NA	59117214	59117035	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_59117000_59117200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011731	chr10	+	2746	15	FSM	ENSMUSG00000019916.15	ENSMUST00000105466.3	2918	15	-118	290	-46	5	multi-exon	FALSE	canonical	3	143	junction_7	20.6288880070682	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTGTGTGGTATTTTCA	NA	False	NA	23	True	TTTAAA	-3	NA	59159071	59207783	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59191171_59191243_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011738	chr10	+	2632	15	FSM	ENSMUSG00000019916.15	ENSMUST00000009789.15	4043	15	68	1343	0	5	multi-exon	FALSE	canonical	3	22	junction_8	56.7996838163088	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTGTGTGGTATTTTCA	NA	False	NA	23	True	TTTAAA	-3	NA	59159185	59207783	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59190161_59190233_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011750	chr10	+	1150	1	FSM	ENSMUSG00000069622.6	ENSMUST00000092511.6	630	1	-139	-381	-139	381	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGACTTTATTGATACAA	1363	False	NA	NA	False	NA	NA	NA	59231437	59232587	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_59231400_59232600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011765	chr10	-	2867	8	FSM	ENSMUSG00000009647.14	ENSMUST00000020312.13	2872	8	5	0	5	0	multi-exon	FALSE	canonical	3	91	junction_7	16.9957977999605	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGCATCTCGTTCTTTA	5635	False	NA	-1	True	AATAAA	-20	NA	59452509	59282805	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_59284681_59287027_59287145_59290767_59290972_59292470_59292632_59302275_59302381_59303447_59303619_59326908_59326979_59452345
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011771	chr10	+	2357	12	FSM	ENSMUSG00000020111.16	ENSMUST00000165563.8	2442	12	87	-2	1	2	multi-exon	FALSE	canonical	2	105	junction_7	32.1836157690049	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGTCCTTTCTTTCT	NA	False	NA	29	True	NA	NA	NA	59538385	59699956	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_59538510_59563778_59563941_59568804_59568980_59576481_59576645_59586325_59586370_59603959_59604075_59623762_59623846_59624700_59624899_59663010_59663149_59675496_59675606_59697384_59697475_59699000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011780	chr10	+	226	1	Intergenic	novelGene_405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGGAGAAGTGGGATAG	7846	False	NA	NA	False	NA	NA	NA	59548699	59548925	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_59548700_59548900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011788	chr10	+	3033	9	FSM	ENSMUSG00000020109.14	ENSMUST00000147914.8	3041	9	6	2	-2	-2	multi-exon	FALSE	canonical	3	150	junction_8	46.5154544210846	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTGGGTCTGCATTGA	NA	False	NA	35	True	NA	NA	NA	59715383	59735122	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732270_59733312
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011815	chr10	-	1759	3	FSM	ENSMUSG00000020108.5	ENSMUST00000020308.5	1755	3	-2	-2	-2	2	multi-exon	FALSE	canonical	3	721	junction_1	4.5	597	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCTCATCGGCGCCATA	NA	False	NA	-2	True	AATAAA	-19	NA	59787658	59785488	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_59786852_59787138_59787395_59787518
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011827	chr10	-	1334	4	FSM	ENSMUSG00000020107.11	ENSMUST00000182898.8	1852	4	21	497	-3	2	multi-exon	FALSE	canonical	3	296	junction_3	30.5650490302604	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTGTGCGTATCCTTTCC	NA	False	NA	-2	True	AATAAA	-20	NA	59838936	59823727	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838777
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011843	chr10	+	1465	11	FSM	ENSMUSG00000044475.15	ENSMUST00000050516.14	1450	11	-15	0	-15	0	multi-exon	FALSE	canonical	3	221	junction_7	12.5797456254091	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCTGTGGTCTGTGCA	NA	False	NA	26	True	AATAAA	-16	NA	59838645	59935808	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_59838730_59840616_59840750_59843548_59843649_59848283_59848382_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935527
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011866	chr10	+	182	1	Intergenic	novelGene_406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGAAAATAATTTC	9058	False	NA	NA	False	NA	NA	NA	60071555	60071737	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_60071600_60071700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011872	chr10	+	2652	14	FSM	ENSMUSG00000004207.15	ENSMUST00000105465.8	2646	14	0	-6	0	3	multi-exon	FALSE	canonical	3	864	junction_6	81.2601199887849	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCCTTGTGTCTCTTTG	6989	False	NA	NA	False	AATAAA	-19	NA	60113448	60138379	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_60113605_60127420_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60131725_60131783_60134876_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011880	chr10	+	2631	14	NNC	ENSMUSG00000004207.15	novel	2657	15	NA	NA	17	3	at_least_one_novel_splicesite	FALSE	canonical	3	130	junction_8	249.821972115103	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCCTTGTGTCTCTTTG	7007	False	NA	NA	False	AATAAA	-19	NA	60113466	60138379	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_+_60113605_60127420_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60131725_60131783_60134876_60135009_60135245_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011909	chr10	-	183	1	Intergenic	novelGene_407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAGAACTTTGTAAGA	5618	False	NA	NA	False	NA	NA	NA	60710681	60710498	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_60710500_60710700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011921	chr10	+	163	2	Intergenic	novelGene_409	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCTTTCAAGTCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	60918046	60918234	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_60918080_60918104
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011925	chr10	-	187	1	Intergenic	novelGene_408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTTGAAAGAATTAACAGT	NA	False	NA	NA	False	NA	NA	NA	60918233	60918046	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_60918000_60918200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011939	chr10	-	4080	15	FSM	ENSMUSG00000020097.15	ENSMUST00000092498.12	4070	15	-10	0	-8	0	multi-exon	FALSE	canonical	3	155	junction_14	85.0811437417726	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGATGGTTGATTTTT	NA	False	NA	-2	True	AATAAA	-16	NA	60983463	60934420	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983363
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011940	chr10	-	4131	15	FSM	ENSMUSG00000020097.15	ENSMUST00000122259.8	4102	15	-29	0	1	0	multi-exon	FALSE	canonical	3	186	junction_14	78.4471744785844	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGATGGTTGATTTTT	NA	False	NA	-2	True	AATAAA	-16	NA	60983452	60934420	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983301
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011966	chr10	+	174	1	Intergenic	novelGene_410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTAAAAGAATGTCA	NA	False	NA	NA	False	NA	NA	NA	60969021	60969195	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_60969000_60969200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011973	chr10	+	218	1	Intergenic	novelGene_411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACATCACAAAACAGGAAG	NA	False	NA	NA	False	NA	NA	NA	61129295	61129513	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_61129300_61129500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011986	chr10	+	186	1	Intergenic	novelGene_412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTGCAAAAACCTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61154744	61154930	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_61154700_61154900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011991	chr10	-	4215	21	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	19	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	86.6294407231168	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGCTGATTGGTCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	61219290	61155434	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_-_61156821_61156868_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000011999	chr10	-	4246	20	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	39	0	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_14	71.6844810258441	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGCTGATTGGTCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	61219270	61155434	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184166_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012000	chr10	-	4148	20	FSM	ENSMUSG00000020092.10	ENSMUST00000020289.10	4282	20	134	0	134	0	multi-exon	FALSE	canonical	3	320	junction_14	26.6759563689748	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGCTGATTGGTCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	61219175	61155434	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012026	chr10	+	218	1	Intergenic	novelGene_413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTTGATGTTTATTT	NA	False	NA	NA	False	AAAAAG	-12	NA	61194992	61195210	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_61195000_61195200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012039	chr10	+	195	1	Intergenic	novelGene_414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTGACTTCAAAGCCAG	NA	False	NA	NA	False	NA	NA	NA	61232848	61233043	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_61232800_61233000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012050	chr10	+	1813	3	FSM	ENSMUSG00000037171.7	ENSMUST00000049339.7	2095	3	282	0	282	0	multi-exon	FALSE	canonical	3	289	junction_2	2.5	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCTCACAATGTGTT	NA	False	NA	20	True	ATTAAA	-17	NA	61254032	61261117	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_61254275_61258760_61259477_61260262
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012063	chr10	-	5933	3	FSM	ENSMUSG00000020091.16	ENSMUST00000020288.15	5784	3	-149	0	-149	0	multi-exon	FALSE	canonical	3	200	junction_2	2.5	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGGTGGTTTGTGGTA	NA	False	NA	-1	True	AATAAA	-16	NA	61288589	61264269	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_61269608_61270696_61270883_61288180
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012083	chr10	+	3209	5	FSM	ENSMUSG00000037151.9	ENSMUST00000049242.9	3216	5	7	0	7	0	multi-exon	FALSE	canonical	3	23	junction_1	4.84767985741633	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGCTGGTGCTTGGTGTCT	1781	False	NA	3	True	AATAAA	-20	NA	61311586	61418570	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_61311669_61318114_61318262_61362838_61362989_61383826_61383995_61415908
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012095	chr10	-	178	1	Antisense	novelGene_ENSMUSG00000112255.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGAGAGAGAGAGAAAGAG	7394	False	NA	NA	False	NA	NA	NA	61409309	61409131	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr10_-_61409100_61409300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012100	chr10	+	181	1	Intergenic	novelGene_415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAGTGTACATACA	NA	False	NA	NA	False	NA	NA	NA	61464474	61464655	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_61464500_61464700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012125	chr10	+	2654	8	NIC	ENSMUSG00000020088.11	novel	2613	7	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	573.138691054507	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTCTCCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	61516097	61529076	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_+_61516193_61517877_61517928_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012129	chr10	+	2727	8	NIC	ENSMUSG00000020088.11	novel	2613	7	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	576.708322981313	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTCTCCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	61516101	61529076	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_+_61516193_61519839_61519967_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012137	chr10	+	2291	4	FSM	ENSMUSG00000020087.6	ENSMUST00000020284.5	2286	4	-5	0	-5	0	multi-exon	FALSE	canonical	3	269	junction_1	6.12825877028341	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCTGTTGGCTGCTTTT	NA	False	NA	21	True	AATAAA	-24	NA	61531287	61538552	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_61532522_61534076_61534208_61535221_61535408_61537812
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012185	chr10	+	188	1	Intergenic	novelGene_416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGACCTGCACCTCTAC	NA	False	NA	NA	False	NA	NA	NA	61554399	61554587	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_61554400_61554600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012189	chr10	-	1993	9	FSM	ENSMUSG00000020086.7	ENSMUST00000020283.5	2175	9	207	-25	207	25	multi-exon	FALSE	canonical	3	267	junction_7	26.0813031691286	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTTATTGCGATATTTT	NA	False	NA	-1	True	NA	NA	NA	61619719	61574418	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_61575242_61576913_61577089_61582411_61582502_61583450_61583551_61585054_61585166_61587455_61587654_61589240_61589348_61593502_61593734_61619561
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012201	chr10	-	194	1	Intergenic	novelGene_417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATCAGAGACAGACACAG	NA	False	NA	NA	False	NA	NA	NA	61680335	61680141	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_61680100_61680300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012213	chr10	+	219	1	Intergenic	novelGene_418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCAGTCTCTCCCTTCC	NA	False	NA	NA	False	TTTAAA	-5	NA	61794934	61795153	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_61794900_61795200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012217	chr10	+	217	1	Intergenic	novelGene_419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAAGTATTTTAGGC	NA	False	NA	NA	False	NA	NA	NA	61802360	61802577	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_61802400_61802600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012223	chr10	+	187	1	Intergenic	novelGene_420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTACACCTCTGTTCTGTA	NA	False	NA	NA	False	NA	NA	NA	61883460	61883647	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_61883500_61883600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012236	chr10	-	168	1	Intergenic	novelGene_421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCTCATATAAATAAAAATAA	1893	False	NA	NA	False	NA	NA	NA	61977259	61977091	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_61977100_61977300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012246	chr10	-	175	1	ISM	ENSMUSG00000037031.11	ENSMUST00000047883.11	3638	8	45201	480	2855	-480	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTAAAAACCCAACAGAATG	NA	False	NA	NA	False	NA	NA	NA	62021829	62021654	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr10_-_62021700_62021800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012249	chr10	-	1694	8	FSM	ENSMUSG00000037031.11	ENSMUST00000047883.11	3638	8	-15	1959	-15	354	multi-exon	TRUE	canonical	3	242	junction_7	11.6303613925986	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTGTTTGGAAGTCT	4861	False	NA	0	True	AATAAA	-27	NA	62067045	62023133	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_62023942_62024421_62024539_62025592_62025641_62027246_62027364_62029645_62029742_62037556_62037632_62038858_62039045_62066798
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012262	chr10	-	3695	18	FSM	ENSMUSG00000037012.19	ENSMUST00000099691.11	4278	18	337	246	337	3	multi-exon	FALSE	canonical	3	414	junction_15	35.8424078528779	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTGGTGTTTCCTTGGGG	NA	False	NA	0	True	AGTAAA	-22	NA	62175984	62104879	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62175791
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012282	chr10	-	2631	9	FSM	ENSMUSG00000020078.17	ENSMUST00000105447.11	2597	9	11	-45	11	3	multi-exon	FALSE	canonical	3	953	junction_7	50.5010829091813	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCATTACAGCATTGC	5209	False	NA	-2	True	AATAAA	-18	NA	62322573	62291010	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322436
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012289	chr10	-	2504	8	NIC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	27	5	combination_of_known_junctions	FALSE	canonical	3	111	junction_6	333.910900983958	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTGTAGTTTAAATAAAAT	5225	False	NA	-1	True	AATAAA	-22	NA	62322557	62291045	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62316336_62316487_62322436
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012309	chr10	+	195	1	Intergenic	novelGene_422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAATAAAAGAGTTGCCT	NA	False	NA	NA	False	NA	NA	NA	62332658	62332853	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_62332700_62332900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012314	chr10	+	219	1	Intergenic	novelGene_423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCTGAGTGGCCATCTA	NA	False	NA	NA	False	NA	NA	NA	62359042	62359261	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_62359000_62359300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012323	chr10	+	175	1	Intergenic	novelGene_424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTTTTTTTTATTAT	NA	False	NA	NA	False	NA	NA	NA	62390830	62391005	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_62390800_62391000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012341	chr10	+	208	1	Intergenic	novelGene_425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTACATAATTTTGGAGGA	NA	False	NA	NA	False	NA	NA	NA	62407716	62407924	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_62407700_62407900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012356	chr10	-	4766	15	FSM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	-40	-4	-40	4	multi-exon	FALSE	canonical	3	474	junction_14	69.0087246776279	416	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGGTGGCTTTTATTT	NA	False	NA	-1	True	AATAAA	-22	NA	62438100	62416025	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434671_62437906
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012364	chr10	+	174	1	Intergenic	novelGene_426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACCCCGAAATTATACAC	2155	False	NA	NA	False	NA	NA	NA	62434807	62434981	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_62434800_62435000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012385	chr10	-	2641	16	NIC	ENSMUSG00000020076.8	novel	2375	16	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	67	junction_15	70.2071854505569	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTGTGTTAAGAGTTTT	8108	False	NA	-13	True	ATTAAA	-26	NA	62486995	62451795	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62483312_62483423_62486803
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012393	chr10	+	175	1	Intergenic	novelGene_427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGTAGGGTAAG	NA	False	NA	NA	False	NA	NA	NA	62470870	62471045	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_62470900_62471000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012398	chr10	-	169	1	Intergenic	novelGene_428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	62527940	62527771	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_62527800_62527900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012400	chr10	+	178	1	Intergenic	novelGene_429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGGTGGAAACCCATTAA	NA	False	NA	NA	False	NA	NA	NA	62528968	62529146	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_62529000_62529100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012422	chr10	-	4440	25	FSM	ENSMUSG00000020074.8	ENSMUST00000219527.2	3862	25	-44	-534	-44	0	multi-exon	TRUE	canonical	0	0	junction_11	85.6392222576133	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTAGTTCCTTCAGAA	NA	False	NA	0	True	ATTAAA	-18	NA	62628109	62579706	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012442	chr10	+	201	1	Intergenic	novelGene_430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAATTTCCATTTTAAAA	5663	False	NA	NA	False	NA	NA	NA	62608043	62608244	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_62608000_62608200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012447	chr10	-	207	1	FSM	ENSMUSG00000112806.2	ENSMUST00000218355.2	1431	1	944	280	944	-280	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCCAGGAGCCTGACC	NA	False	NA	NA	False	NA	NA	NA	62618022	62617815	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_62617800_62618000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012477	chr10	+	3123	9	FSM	ENSMUSG00000071253.9	ENSMUST00000044977.10	3145	9	23	-1	-11	1	multi-exon	FALSE	canonical	3	58	junction_3	11.9314447993527	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGATGGCTTGGTTTTTTT	NA	False	NA	19	True	ATTAAA	-20	NA	62756434	62782278	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_62756661_62764074_62764168_62766081_62766216_62768497_62768562_62773196_62773319_62773706_62773774_62776820_62776984_62778429_62778499_62780093
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012482	chr10	-	196	1	Intergenic	novelGene_431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAACATCAAAACAAGTG	603	False	NA	NA	False	NA	NA	NA	62763798	62763602	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_62763600_62763800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012492	chr10	+	230	1	Intergenic	novelGene_432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCATTTGTATGTGTATA	NA	False	NA	NA	False	NA	NA	NA	62806115	62806345	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_62806100_62806300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012525	chr10	-	1404	10	FSM	ENSMUSG00000020069.17	ENSMUST00000118898.8	2168	10	3	761	3	3	multi-exon	FALSE	canonical	3	179	junction_6	104.074166337115	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGTTGCTACTTTTTAT	5784	False	NA	-3	True	AATAAA	-18	NA	62859670	62851203	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853864_62854005_62854538_62854678_62855171_62855307_62859498
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012541	chr10	-	194	1	Intergenic	novelGene_433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATCCTCACATAATGTC	8479	False	NA	NA	False	NA	NA	NA	62871332	62871138	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_62871100_62871300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012547	chr10	-	186	1	Intergenic	novelGene_434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGTCAAAGGCAATGCT	NA	False	NA	NA	False	NA	NA	NA	62977505	62977319	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_62977300_62977500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012551	chr10	+	4017	25	FSM	ENSMUSG00000020064.10	ENSMUST00000020258.10	3898	25	-108	-11	-7	7	multi-exon	FALSE	canonical	3	265	junction_7	41.1321548993809	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTATGGTTGTAATTGA	NA	False	NA	24	True	AATAAA	-38	NA	63079581	63153664	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012564	chr10	-	3957	9	FSM	ENSMUSG00000020063.17	ENSMUST00000020257.13	3905	9	-50	-2	-47	0	multi-exon	FALSE	canonical	3	191	junction_8	29.4870204496826	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCATTGTTCATAGCATA	NA	False	NA	2	True	ATTAAA	-28	NA	63174861	63154783	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63167523_63167677_63171414_63171657_63172758_63172876_63174343
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012573	chr10	-	3788	8	FSM	ENSMUSG00000020063.17	ENSMUST00000105442.3	3740	8	0	-48	0	-3	multi-exon	FALSE	canonical	3	29	junction_7	79.0360289839452	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAACTTCCATTGTTCATA	NA	False	NA	-3	True	ATTAAA	-23	NA	63174814	63154788	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63167523_63167677_63171414_63171657_63174343
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012587	chr10	+	158	1	Intergenic	novelGene_435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGAGCCAGCGGGGTTG	NA	False	NA	NA	False	NA	NA	NA	63170379	63170537	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_63170400_63170500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012591	chr10	+	185	1	Intergenic	novelGene_436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAGTAGGAATCGGCCGC	NA	False	NA	NA	False	NA	NA	NA	63213231	63213416	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_63213200_63213400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012599	chr10	-	177	1	Intergenic	novelGene_437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAACGAGAGGGGAA	NA	False	NA	NA	False	NA	NA	NA	63303152	63302975	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_63303000_63303200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012604	chr10	+	189	1	Intergenic	novelGene_438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCACGCAAGGGTGGAGC	NA	False	NA	NA	False	NA	NA	NA	66669450	66669639	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_66669400_66669600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012608	chr10	+	240	1	Intergenic	novelGene_439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAACTGTGTTAAATCT	NA	False	NA	NA	False	NA	NA	NA	66688175	66688415	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_66688200_66688400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012611	chr10	-	210	1	Intergenic	novelGene_440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAATAGAAATAAATCTTG	NA	False	NA	NA	False	GATAAA	-10	NA	66708890	66708680	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_66708700_66708900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012628	chr10	+	249	1	Intergenic	novelGene_441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTAATGTGTGGAGAAG	NA	False	NA	NA	False	NA	NA	NA	66915388	66915637	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_66915400_66915600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012637	chr10	+	213	1	Intergenic	novelGene_442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCCCAACCTGCAATGT	NA	False	NA	NA	False	AAAAAG	-11	NA	66918850	66919063	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_66918800_66919100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012650	chr10	+	196	1	Intergenic	novelGene_443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAAAGAAAAGCATACTT	NA	False	NA	NA	False	NA	NA	NA	67048094	67048290	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_67048100_67048300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012675	chr10	-	4616	1	FSM	ENSMUSG00000057134.7	ENSMUST00000075686.7	4558	1	-58	0	-58	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTAGAAATAATGTTGCTTA	NA	False	NA	NA	False	AATAAA	-17	NA	67384956	67380340	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_67380300_67385000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012681	chr10	+	2492	12	FSM	ENSMUSG00000037846.19	ENSMUST00000117086.2	2246	12	-28	-218	-11	218	multi-exon	FALSE	canonical	3	52	junction_10	13.4870614459296	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAATCTGCTATTCAAA	NA	False	NA	26	True	ATTAAA	-23	NA	67815516	67878346	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_67815643_67823136_67823334_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347_67862480_67871618_67871782_67875860_67875969_67877208
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012702	chr10	-	7568	10	FSM	ENSMUSG00000019947.11	ENSMUST00000219238.2	7581	10	10	3	-9	-3	multi-exon	TRUE	canonical	3	31	junction_9	46.8506953451172	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGAGTGTCTGTCTCT	5336	False	NA	-7	True	AATAAA	-20	NA	68114560	67928352	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_67934500_67937724_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_68021855_68022087_68078833_68079060_68113759_68114015_68114519
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012713	chr10	+	192	1	Intergenic	novelGene_444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGCAATTGTTAACTTGA	7638	False	NA	NA	False	NA	NA	NA	68145427	68145619	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_68145400_68145600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012722	chr10	-	149	1	Intergenic	novelGene_445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGGAGTGAGCGACCTTC	NA	False	NA	NA	False	NA	NA	NA	69147713	69147564	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_69147600_69147700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012728	chr10	-	1242	8	FSM	ENSMUSG00000019942.14	ENSMUST00000020099.13	4375	8	-18	3151	-18	27	multi-exon	TRUE	canonical	3	2056	junction_1	102.156542539739	256	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTGGCTGTTAATTAC	NA	False	NA	-1	True	AATATA	-24	NA	69188786	69174126	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69178541_69180890_69181015_69181904_69182062_69185925_69185989_69188665
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012739	chr10	+	189	1	Antisense	novelGene_ENSMUSG00000112509.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGATTTGAATTTTTGTG	309	False	NA	NA	False	NA	NA	NA	69208860	69209049	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr10_+_69208900_69209000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012765	chr10	+	185	1	Intergenic	novelGene_446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAATTTTCCCGAGG	9654	False	NA	NA	False	NA	NA	NA	69797179	69797364	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_69797200_69797400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012770	chr10	-	178	1	Intergenic	novelGene_447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCTGAGCAAGCAGGGGA	NA	False	NA	NA	False	NA	NA	NA	69979853	69979675	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_69979700_69979900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012778	chr10	+	167	1	Intergenic	novelGene_448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACTTGCTGCCTGGTGGT	NA	False	NA	NA	False	NA	NA	NA	70058194	70058361	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_70058200_70058400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012785	chr10	-	182	1	Intergenic	novelGene_449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGATTGCAAAC	NA	False	NA	NA	False	NA	NA	NA	70074736	70074554	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_70074600_70074700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012805	chr10	-	193	1	Intergenic	novelGene_450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAAGAGTTCATATGCTG	NA	False	NA	NA	False	NA	NA	NA	70845467	70845274	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_70845300_70845500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012823	chr10	-	1428	7	FSM	ENSMUSG00000019927.7	ENSMUST00000020085.7	1431	7	3	0	3	0	multi-exon	FALSE	canonical	3	135	junction_2	5.39804491356722	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTTGACTACTTAATGCA	NA	False	NA	0	True	AATAAA	-18	NA	71121089	71090809	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_71091705_71092444_71092539_71094030_71094137_71095571_71095650_71097913_71097946_71098028_71098093_71120930
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012832	chr10	+	165	1	Intergenic	novelGene_451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATGCAAATCGTGT	7409	False	NA	NA	False	NA	NA	NA	71138959	71139124	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_71139000_71139100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012839	chr10	-	993	3	FSM	ENSMUSG00000037710.9	ENSMUST00000045887.9	1084	3	80	11	80	-11	multi-exon	FALSE	canonical	3	1606	junction_1	82	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTTCATCTCTGTGG	1333	False	NA	-4	True	AATAAA	-16	NA	71180704	71166320	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_71166957_71172043_71172250_71180553
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012850	chr10	+	195	1	Intergenic	novelGene_452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATTATTAAAAAATTTTTT	1288	False	NA	NA	False	NA	NA	NA	71182664	71182859	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_71182700_71182900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012868	chr10	+	3690	6	FSM	ENSMUSG00000060733.14	ENSMUST00000121446.2	1492	6	-43	-2155	30	-1730	multi-exon	FALSE	canonical	3	80	junction_3	108.435049684131	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGATGGAAGTTGCATAA	2246	False	NA	9	True	AATAAA	-23	NA	71183622	71219985	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_71183921_71199279_71199366_71201838_71201936_71208534_71208711_71212534_71212617_71217034
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012874	chr10	+	184	1	Intergenic	novelGene_453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTGTCCTGGATTCTGC	NA	False	NA	NA	False	NA	NA	NA	71257797	71257981	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_71257800_71258000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012882	chr10	+	1823	8	FSM	ENSMUSG00000019923.15	ENSMUST00000020081.11	1834	8	16	-5	16	5	multi-exon	FALSE	canonical	3	928	junction_7	94.1772102940808	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTTGCATTTTGTA	NA	False	NA	15	True	AATAAA	-28	NA	72490692	72510801	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72509797
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012891	chr10	+	1164	8	FSM	ENSMUSG00000019923.15	ENSMUST00000160337.2	1138	8	-20	-6	-19	6	multi-exon	FALSE	canonical	3	212	junction_7	327.562862014955	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATGTTGTTGTTATAGC	NA	False	NA	19	True	ATTAAA	-20	NA	72490707	72505003	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72504643
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012904	chr10	-	226	1	Intergenic	novelGene_454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTGTTTTTTTTTCTAT	NA	False	NA	NA	False	NA	NA	NA	73091387	73091161	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_73091200_73091400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012911	chr10	-	5190	1	Intergenic	novelGene_455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	315	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTTTCTTGTGGGTGATT	NA	False	NA	NA	False	NA	NA	NA	74555798	74550608	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_74550600_74555800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012922	chr10	-	3122	2	Intergenic	novelGene_456	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	75	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCCGTTTCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	74555797	74550614	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_74551462_74553522
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012952	chr10	+	179	1	Intergenic	novelGene_457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAAAATTTTGCCTGGG	NA	False	NA	NA	False	NA	NA	NA	75299801	75299980	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_75299800_75300000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012962	chr10	-	2962	6	FSM	ENSMUSG00000033416.16	ENSMUST00000039796.14	3500	6	5	533	5	9	multi-exon	FALSE	canonical	3	66	junction_3	9.3893556754444	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCACCCTTTGTCTTGTCG	NA	False	NA	-4	True	AATAAA	-20	NA	75353210	75342649	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_75344804_75345425_75345668_75345865_75345958_75346954_75347121_75347905_75347991_75352987
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000012999	chr10	+	2267	15	NIC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	105.112985857687	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTGTCTTGTGTATGA	NA	False	NA	36	True	NA	NA	NA	75399932	75422034	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_+_75400093_75400654_75400740_75409444_75409583_75410065_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013016	chr10	-	172	1	Intergenic	novelGene_458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGAAAGGTTTAAC	NA	False	NA	NA	False	NA	NA	NA	75403112	75402940	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_75402900_75403100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013024	chr10	+	178	1	Intergenic	novelGene_459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAAAGAATCTGTGC	7144	False	NA	NA	False	NA	NA	NA	75437196	75437374	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_75437200_75437400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013029	chr10	-	184	1	Intergenic	novelGene_460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATATTAGAACCAGAAGTG	NA	False	NA	NA	False	NA	NA	NA	75454682	75454498	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_75454500_75454700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013044	chr10	-	181	1	Intergenic	novelGene_461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATTGGTGGAGGAG	NA	False	NA	NA	False	NA	NA	NA	75578920	75578739	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_75578700_75578900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013061	chr10	+	182	1	Intergenic	novelGene_462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAGAAGAAAGAATATA	NA	False	NA	NA	False	NA	NA	NA	75632178	75632360	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_75632200_75632400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013064	chr10	+	186	1	Intergenic	novelGene_463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATTATGTACCCAC	NA	False	NA	NA	False	NA	NA	NA	75651449	75651635	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_75651400_75651600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013069	chr10	+	177	1	Intergenic	novelGene_464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTTAAAAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75679956	75680133	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_75680000_75680100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013078	chr10	-	232	1	Intergenic	novelGene_465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCAGCACTTGGGAGGCA	NA	False	NA	NA	False	NA	NA	NA	75683157	75682925	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_75682900_75683200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013081	chr10	-	800	4	NNC	ENSMUSG00000033307.8	novel	544	3	NA	NA	-2038	5	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	7244.40645525145	878	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCAGCTTCTGCTTCCTT	NA	False	NA	-5	True	AATAAA	-23	NA	75698112	75695181	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_-_75695378_75695520_75695694_75695894_75696241_75698027
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013093	chr10	-	1660	9	FSM	ENSMUSG00000000902.14	ENSMUST00000000925.10	1660	9	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_7	283.203990084886	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCAGTAGCATAAAACTG	6861	False	NA	-2	True	AATAAA	-20	NA	75757451	75732602	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_75732923_75733278_75733411_75740217_75740409_75741863_75742031_75745987_75746116_75747352_75747491_75750897_75751028_75752606_75752746_75757136
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013095	chr10	-	1638	9	FSM	ENSMUSG00000000902.14	ENSMUST00000121304.2	1622	9	-8	-8	-5	0	multi-exon	FALSE	canonical	3	799	junction_7	118.779206934547	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCAGTAGCATAAAACTG	6856	False	NA	-2	True	AATAAA	-20	NA	75757456	75732602	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_75732923_75733278_75733411_75740217_75740409_75741863_75742031_75745987_75746116_75747352_75747491_75750897_75751028_75752633_75752746_75757136
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013117	chr10	-	1794	9	FSM	ENSMUSG00000000901.18	ENSMUST00000120281.8	1793	9	0	-1	0	1	multi-exon	FALSE	canonical	3	68	junction_1	51.1639521538358	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGTCTGTTTTTCTTTG	5083	False	NA	-2	True	ATTAAA	-18	NA	75768309	75759054	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_75759325_75759792_75759950_75761253_75761512_75762244_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013142	chr10	-	185	1	Intergenic	novelGene_466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGGGCAGGGGGCTGGCG	2700	False	NA	NA	False	NA	NA	NA	75770692	75770507	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_75770500_75770700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013164	chr10	-	175	1	Intergenic	novelGene_467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGGAGAGGGATCAA	6913	False	NA	0	True	NA	NA	NA	75791668	75791493	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_75791500_75791700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013176	chr10	-	211	1	Intergenic	novelGene_468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTACAAAAATAAATAAAT	5818	False	NA	NA	False	NA	NA	NA	75792763	75792552	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_75792600_75792800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013182	chr10	-	181	1	Intergenic	novelGene_469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTCAAATAGAAAAGGAAAC	NA	False	NA	NA	False	NA	NA	NA	75798685	75798504	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_75798500_75798700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013188	chr10	+	196	1	Intergenic	novelGene_470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGTGAAGGTGTTGTCA	NA	False	NA	NA	False	NA	NA	NA	75802818	75803014	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_75802800_75803000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013225	chr10	+	194	1	Intergenic	novelGene_471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAACAAATGAACTTCTTT	6678	False	NA	NA	False	NA	NA	NA	75900125	75900319	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_75900100_75900300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013241	chr10	-	9298	41	NIC	ENSMUSG00000001151.11	novel	9341	42	NA	NA	21	-1	intron_retention	TRUE	canonical	3	73	junction_29	43.2194328398696	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTGGCTACAGCCATT	NA	False	NA	-17	True	AATAAA	-17	NA	76278599	76187097	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254401_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275976_76276190_76278398
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013254	chr10	+	6247	29	NNC	ENSMUSG00000001150.8	novel	578	5	NA	NA	-5880	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	64.111699002441	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCGCCTTAGTTTTATGA	5725	False	NA	12	True	AATAAA	-18	NA	76298880	76351691	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_+_76298989_76305782_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013257	chr10	+	6480	29	FSM	ENSMUSG00000001150.8	ENSMUST00000170795.3	6427	29	-48	-5	-48	5	multi-exon	FALSE	canonical	3	127	junction_5	51.5606810130608	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTAGTTTTATGAATGAA	NA	False	NA	17	True	AATAAA	-23	NA	76304712	76351696	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_76305049_76305782_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013270	chr10	+	4328	23	ISM	ENSMUSG00000001150.8	ENSMUST00000170795.3	6427	29	11942	0	-249	0	3prime_fragment	FALSE	canonical	3	162	junction_1	37.3435303124698	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCGCCTTAGTTTTATGA	NA	False	NA	12	True	AATAAA	-18	NA	76316702	76351691	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr10_+_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013284	chr10	+	2962	21	NIC	ENSMUSG00000033105.13	novel	4667	22	NA	NA	5	701	combination_of_known_splicesites	FALSE	canonical	2	7	junction_14	51.7483091511211	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTGCCTTCCTGAGACA	NA	False	NA	6	True	AATAAA	-14	NA	76367450	76389768	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013285	chr10	+	630	6	NIC	ENSMUSG00000033105.13	novel	3969	16	NA	NA	5	1878	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	92.058676940308	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTGTATGCATTATGAAA	NA	False	NA	NA	False	NA	NA	NA	76367450	76373435	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76373402
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013293	chr10	-	3958	34	NIC	ENSMUSG00000001119.8	novel	4100	35	NA	NA	133	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	12.3589563334811	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCCTCTTTATCTACA	8575	False	NA	0	True	AATAAA	-15	NA	76561869	76544625	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_76546016_76546179_76546210_76546795_76546974_76547116_76547301_76547408_76547519_76548101_76548236_76549018_76549056_76549459_76549496_76549706_76549773_76549947_76550011_76550247_76550284_76550491_76550543_76550828_76550892_76551104_76551168_76552094_76552158_76552552_76552616_76552962_76552999_76553095_76553150_76553233_76553297_76553628_76553692_76553892_76553947_76554206_76554252_76554350_76554378_76554812_76554840_76554958_76555004_76555456_76555511_76556794_76556840_76556921_76556943_76557096_76557118_76557236_76557366_76557649_76557810_76559209_76559411_76560772_76560903_76561653
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013294	chr10	-	3034	26	NNC	ENSMUSG00000001119.8	novel	4100	35	NA	NA	-77	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	15.0116754561241	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCCTCTTTATCTACA	NA	False	NA	0	True	AATAAA	-15	NA	76555147	76544625	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_-_76546016_76546179_76546210_76546795_76546974_76547116_76547301_76547408_76547519_76548101_76548236_76549018_76549056_76549459_76549496_76549706_76549773_76549947_76550011_76550247_76550284_76550491_76550543_76550828_76550892_76551104_76551168_76552094_76552158_76552552_76552616_76552962_76552999_76553095_76553150_76553233_76553297_76553628_76553692_76553892_76553947_76554206_76554252_76554350_76554378_76554812_76554840_76554958_76555004_76555094
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013310	chr10	-	2157	16	FSM	ENSMUSG00000001120.16	ENSMUST00000001148.11	2013	16	-141	-3	-42	3	multi-exon	FALSE	canonical	3	60	junction_5	18.4407760742931	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGACTTCTCTCTGCTA	1095	False	NA	0	True	AATAAA	-21	NA	76797763	76597687	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606874_76617665_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593_76636749_76661693_76661827_76728390_76728491_76797581
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013319	chr10	+	210	1	Intergenic	novelGene_472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTAAAAACTTTCTATACT	NA	False	NA	NA	False	NA	NA	NA	76783256	76783466	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_76783300_76783500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013340	chr10	+	2518	5	NIC	ENSMUSG00000001436.16	novel	2347	6	NA	NA	-20	-5	intron_retention	FALSE	canonical	0	0	junction_2	44.4606567652796	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGCTTTTCTGTTGTGA	NA	False	NA	11	True	ATTAAA	-13	NA	76869081	76886260	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_+_76869182_76874183_76874414_76877649_76878809_76880594_76880737_76885373
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013345	chr10	+	180	1	Intergenic	novelGene_473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAGAAAATGAGTGTA	NA	False	NA	NA	False	NA	NA	NA	76877200	76877380	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_76877200_76877400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013353	chr10	-	5057	42	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	127	junction_6	49.9834594889811	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGTTTATAAGCTGCCT	5938	False	NA	0	True	AATAAA	-20	NA	77002379	76888011	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894662_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013374	chr10	+	209	1	Intergenic	novelGene_474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACTACCAATAGTAGTAG	NA	False	NA	NA	False	NA	NA	NA	76997106	76997315	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_76997100_76997300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013379	chr10	+	2217	9	FSM	ENSMUSG00000020260.10	ENSMUST00000020493.9	2290	9	73	0	-27	0	multi-exon	FALSE	canonical	3	83	junction_5	28.5938695352693	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCAGTCCTAGAAATGGT	NA	False	NA	16	True	AATAAA	-17	NA	77095124	77105409	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_77095288_77096407_77096659_77098270_77098416_77099098_77099210_77100789_77100857_77101669_77101796_77102746_77102928_77103017_77103142_77104360
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013391	chr10	+	199	1	Intergenic	novelGene_475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGACACCTGGGGTGGTC	NA	False	NA	NA	False	NA	NA	NA	77187858	77188057	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_77187900_77188100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013401	chr10	-	2423	6	FSM	ENSMUSG00000032977.10	ENSMUST00000045454.9	2394	6	-29	0	-29	0	multi-exon	FALSE	canonical	3	238	junction_3	11.7881296226331	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCAGTCCCCTGGCTTTC	NA	False	NA	-7	True	AATAAA	-26	NA	77351648	77322494	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_77324308_77325831_77325901_77333196_77333348_77339679_77339749_77350139_77350249_77351436
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013412	chr10	+	2311	6	FSM	ENSMUSG00000009291.14	ENSMUST00000009435.12	2294	6	-16	-1	-16	1	multi-exon	FALSE	canonical	3	637	junction_4	46.3188946327522	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGATTTCTTTGTTTTGTC	1275	False	NA	33	True	AATAAA	-16	NA	77417537	77434567	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_77417762_77423084_77423138_77425467_77425577_77428679_77428852_77429697_77429745_77432861
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013424	chr10	+	1631	4	FSM	ENSMUSG00000020265.17	ENSMUST00000020501.15	2630	4	97	902	-15	7	multi-exon	FALSE	canonical	3	1171	junction_3	110.14031454871	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTATGTTAAACACTGTAT	NA	False	NA	32	True	AGTAAA	-25	NA	77442027	77453263	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_77442176_77445645_77445775_77449813_77449886_77451981
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013458	chr10	-	181	1	Intergenic	novelGene_476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTAGAGCCAGGCAGTG	NA	False	NA	NA	False	NA	NA	NA	77457300	77457119	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_77457100_77457300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013460	chr10	+	2016	6	FSM	ENSMUSG00000009293.18	ENSMUST00000174510.8	2031	6	18	-3	18	3	multi-exon	FALSE	canonical	3	276	junction_5	14.0427917452336	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTGTGGTGCTCACTT	108	False	NA	8	True	AATAAA	-21	NA	77458126	77481830	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_77458251_77466559_77466596_77466682_77466729_77477293_77477413_77479302_77479444_77480280
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013473	chr10	+	208	1	Intergenic	novelGene_477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGGTGCTCTTGACTG	9645	False	NA	NA	False	NA	NA	NA	77467663	77467871	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_77467700_77467900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013481	chr10	-	198	1	Intergenic	novelGene_478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCGGAACAAGCAGAGAG	2621	False	NA	NA	False	AATAAA	-10	NA	77566053	77565855	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_77565900_77566100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013483	chr10	-	184	1	Intergenic	novelGene_479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGGGGAGGATATGGGGG	9925	False	NA	NA	False	NA	NA	NA	77597191	77597007	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_77597000_77597200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013490	chr10	+	1696	7	FSM	ENSMUSG00000020284.17	ENSMUST00000105397.10	1818	7	126	-4	-4	2	multi-exon	FALSE	canonical	3	54	junction_4	1.5723301886761	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCCCAGGCCCACTT	NA	False	NA	16	True	AATAAA	-16	NA	77814483	77821272	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_77814616_77815586_77815606_77816334_77816382_77817417_77817648_77818703_77818876_77819349_77819426_77820252
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013495	chr10	-	2835	22	FSM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	7	888	7	-888	multi-exon	FALSE	canonical	3	1016	junction_15	83.2280695716646	405	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGGCTATAGTTTGTTT	NA	False	NA	-4	True	NA	NA	NA	77845634	77823668	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013512	chr10	+	178	1	Intergenic	novelGene_480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAAAAGGTTAG	8805	False	NA	NA	False	NA	NA	NA	77847165	77847343	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_77847200_77847300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013526	chr10	-	3882	21	FSM	ENSMUSG00000032834.12	ENSMUST00000042556.11	3872	21	-10	0	-10	0	multi-exon	FALSE	canonical	3	184	junction_16	14.9260678009984	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTTTTGTCTGTGTGTGG	NA	False	NA	-5	True	AATACA	-17	NA	78020993	78006742	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_78007969_78009214_78009290_78009406_78009558_78009666_78009886_78010764_78010831_78011319_78011429_78012086_78012235_78012789_78012971_78013583_78013735_78013999_78014148_78014261_78014411_78014794_78014932_78015548_78015620_78015959_78016104_78016882_78017113_78017344_78017481_78018219_78018364_78018456_78018557_78018779_78018875_78019891_78020005_78020904
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013552	chr10	+	2652	1	Antisense	novelGene_ENSMUSG00000001211.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAACAACCGAGCCCTCG	NA	False	NA	NA	False	AAGAAA	-10	NA	78184961	78187613	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr10_+_78185000_78187600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013559	chr10	+	490	1	FSM	ENSMUSG00000064317.6	ENSMUST00000072739.6	309	1	-17	-164	-17	164	mono-exon	FALSE	NA	NA	NA	NA	NA	249	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTAATTTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	78229136	78229626	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_78229100_78229600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013586	chr10	-	5134	11	FSM	ENSMUSG00000032788.16	ENSMUST00000041616.15	5124	11	-13	3	-13	-3	multi-exon	TRUE	canonical	3	285	junction_4	40.3910881259715	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTAGTGTGGTCATT	6789	False	NA	-5	True	AATAAA	-14	NA	78300822	78272580	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_78276748_78276970_78277038_78279614_78279752_78280816_78280929_78282783_78282830_78283728_78283815_78285063_78285111_78286116_78286201_78287312_78287418_78289307_78289363_78300594
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013591	chr10	+	189	1	Intergenic	novelGene_481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGAGGAATGCAAACACAG	NA	False	NA	NA	False	NA	NA	NA	78335656	78335845	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_78335700_78335800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013597	chr10	+	2521	16	NIC	ENSMUSG00000032763.12	novel	2329	16	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	39.9503024602651	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTATACTGGTTTATT	5376	False	NA	30	True	AATAAA	-39	NA	78410310	78420336	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_+_78410669_78410920_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013602	chr10	+	2258	15	FSM	ENSMUSG00000032763.12	ENSMUST00000218885.2	2233	15	-2	-23	1	0	multi-exon	FALSE	canonical	3	132	junction_8	19.815990244945	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTATACTGGTTTATT	5891	False	NA	30	True	AATAAA	-39	NA	78410825	78420336	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013612	chr10	-	3266	8	FSM	ENSMUSG00000032714.7	ENSMUST00000040580.7	3288	8	22	0	22	0	multi-exon	TRUE	canonical	3	17	junction_5	4.14039335605413	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGACTGAGTCCTTGG	NA	False	NA	1	True	AATAAA	-15	NA	78427776	78420336	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_78421746_78421923_78422150_78422792_78422954_78423164_78423292_78424540_78424756_78424934_78425580_78425735_78426078_78427635
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013621	chr10	+	195	1	Intergenic	novelGene_482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTCTCCATTTAATTTG	NA	False	NA	NA	False	NA	NA	NA	79265058	79265253	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_79265100_79265300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013644	chr10	-	3043	13	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-5	0	intron_retention	FALSE	canonical	3	111	junction_12	34.2502027569019	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTCTCATGGATTCCA	NA	False	NA	-3	True	ATTAAA	-16	NA	79390930	79376078	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_79377034_79377347_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013660	chr10	-	2598	14	NNC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-4	0	intron_retention	FALSE	canonical	2	12	junction_2	61.0739197091447	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGTGTCTCATGGATTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	79390929	79376079	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_-_79377034_79377347_79377769_79378211_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013675	chr10	+	193	1	Intergenic	novelGene_483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTCTGGTGGAATCACC	NA	False	NA	NA	False	NA	NA	NA	79402447	79402640	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_79402400_79402600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013682	chr10	-	190	1	Intergenic	novelGene_484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTCAGGGACCTCTCAG	NA	False	NA	NA	False	NA	NA	NA	79492786	79492596	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_79492600_79492800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013695	chr10	+	1084	2	FSM	ENSMUSG00000020308.8	ENSMUST00000239401.2	1101	2	23	-6	23	5	multi-exon	FALSE	canonical	3	316	junction_1	0	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGGTCACCTGTGTGC	8029	False	NA	16	True	AATAAA	-18	NA	79505266	79511966	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_79505618_79511233
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013719	chr10	+	1251	5	FSM	ENSMUSG00000020307.16	ENSMUST00000219930.2	534	5	-259	-458	8	0	multi-exon	FALSE	canonical	3	123	junction_4	797.39838694344	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAGAGAATCACCTAGGA	NA	False	NA	21	True	AATAAA	-21	NA	79518036	79524232	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523689
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013726	chr10	+	217	1	Intergenic	novelGene_485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGTGATGGTGGTGCAC	NA	False	NA	NA	False	TTTAAA	-23	NA	79536181	79536398	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_79536200_79536400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013748	chr10	+	3241	8	FSM	ENSMUSG00000020331.10	ENSMUST00000099513.8	3195	8	-40	-6	-40	6	multi-exon	FALSE	canonical	3	76	junction_3	3.18157963590287	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCGTCTCATTACTTTG	NA	False	NA	30	True	AATAAA	-20	NA	79552427	79571948	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_79553054_79560221_79560646_79561980_79562143_79564726_79564946_79566680_79566828_79569504_79569746_79569896_79570062_79570691
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013765	chr10	-	3893	22	NIC	ENSMUSG00000020329.13	novel	3755	21	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	1	2	junction_19	44.9978583516574	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGACGCTGCGCTCGGCGC	4715	False	NA	-4	True	NA	NA	NA	79582407	79571960	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79579712_79579854_79581507_79581607_79582298
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013812	chr10	-	190	1	Intergenic	novelGene_486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTGTTTTATTTTAAAC	NA	False	NA	NA	False	NA	NA	NA	79673786	79673596	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_79673600_79673800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013824	chr10	+	2958	14	FSM	ENSMUSG00000006498.17	ENSMUST00000172282.8	3110	14	155	-3	-23	3	multi-exon	FALSE	canonical	3	966	junction_8	238.590734232364	776	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCCTGTCATTGGGCG	1538	False	NA	26	True	AATAAA	-16	NA	79690415	79700269	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013847	chr10	-	3210	15	FSM	ENSMUSG00000013833.16	ENSMUST00000165684.8	2950	15	-31	-229	-6	2	multi-exon	TRUE	canonical	3	153	junction_9	18.1911617921159	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGTCACCGTGGTCC	1806	False	NA	1	True	AATAAA	-20	NA	79744763	79730539	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_79731245_79731460_79731545_79732181_79732399_79732592_79732786_79733398_79733533_79734069_79734281_79734730_79734938_79735034_79735244_79735930_79736087_79738256_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324_79743491_79744651
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013864	chr10	-	1822	8	FSM	ENSMUSG00000035781.15	ENSMUST00000045628.15	1898	8	76	0	-2	0	multi-exon	FALSE	canonical	3	145	junction_7	14.1608831731957	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGTCCCCGTGTTTGTC	9758	False	NA	-8	True	AATAAA	-15	NA	79752764	79745885	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_79746974_79747775_79747832_79747908_79747995_79748229_79748316_79748482_79748604_79749058_79749181_79749390_79749546_79752656
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013876	chr10	+	3936	10	FSM	ENSMUSG00000035754.9	ENSMUST00000045247.9	3911	10	-19	-6	-19	6	multi-exon	FALSE	canonical	3	1673	junction_5	33.7828943493195	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTGCTACTTTTGTTG	2267	False	NA	NA	False	NA	NA	NA	79795966	79806043	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013886	chr10	+	1474	9	NIC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	0	81	intron_retention	FALSE	canonical	3	1673	junction_5	35.3120022088808	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGCGCCTTGGTTGTTCT	2286	False	NA	31	True	ACTAAA	-19	NA	79795985	79803526	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802304_79802393_79802561_79803153_79803223_79803304
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013917	chr10	+	3508	22	FSM	ENSMUSG00000035697.15	ENSMUST00000043311.7	3499	22	-7	-2	-7	1	multi-exon	TRUE	canonical	3	46	junction_7	15.7468637773006	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCCGATCTTGTTCTTTT	813	False	NA	14	True	AATAAA	-19	NA	79855479	79867304	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_79855633_79856523_79856668_79856784_79856870_79856955_79857029_79857222_79857290_79857379_79857518_79857628_79857694_79857910_79858022_79858108_79858190_79860496_79860686_79861242_79861381_79861989_79862181_79862266_79862392_79862490_79862569_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013926	chr10	-	1218	7	FSM	ENSMUSG00000004667.19	ENSMUST00000004786.10	1148	7	-69	-1	-69	1	multi-exon	FALSE	canonical	3	2552	junction_2	153.800375667797	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTGCAATCCTAGAGAG	5446	False	NA	-18	True	ATTAAA	-20	NA	79875698	79871781	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_79872136_79872360_79872433_79872597_79872677_79872748_79872808_79873021_79873219_79874272_79874448_79875416
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013934	chr10	-	1149	6	FSM	ENSMUSG00000004667.19	ENSMUST00000152843.2	900	6	-23	-226	-14	0	multi-exon	FALSE	canonical	3	2552	junction_2	164.012926319848	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGTGCAATCCTAGAGA	5586	False	NA	-19	True	ATTAAA	-19	NA	79875558	79871782	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_79872136_79872360_79872433_79872597_79872808_79873021_79873219_79874272_79874448_79875416
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013944	chr10	+	203	1	Intergenic	novelGene_487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGGCCTTAGTCATCAAA	2952	False	NA	NA	False	NA	NA	NA	79877462	79877665	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_79877500_79877700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013951	chr10	+	205	1	Intergenic	novelGene_488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTATGGTCCATTTTCA	93	False	NA	NA	False	NA	NA	NA	79881145	79881350	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_79881100_79881400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013953	chr10	+	883	7	FSM	ENSMUSG00000075706.12	ENSMUST00000105372.9	959	7	77	-1	77	1	multi-exon	FALSE	canonical	3	7423	junction_5	743.006878987148	679	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGTGTCTTTGGGTCA	732	False	NA	5	True	AATAAA	-15	NA	79889398	79892274	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_79889550_79890347_79890443_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013976	chr10	-	4656	32	NIC	ENSMUSG00000035673.11	novel	4850	33	NA	NA	-23	-22	combination_of_known_junctions	FALSE	canonical	3	132	junction_8	18.0258226152743	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGCCTTTTGCTTACTT	NA	False	NA	-18	True	AATGAA	-35	NA	79938555	79892847	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894564_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938443
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000013990	chr10	-	187	1	Intergenic	novelGene_489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	754	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTCGGTGTTGTCATG	NA	False	NA	NA	False	NA	NA	NA	79947842	79947655	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_79947700_79947800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014002	chr10	+	966	4	FSM	ENSMUSG00000003072.16	ENSMUST00000003156.15	931	4	-35	0	-35	0	multi-exon	FALSE	canonical	3	2420	junction_3	40.5983031938802	707	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTTTCTAACTGCAC	4410	False	NA	20	True	ATTAAA	-19	NA	79978113	79981652	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_79978441_79979665_79979820_79981052_79981142_79981256
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014014	chr10	+	1260	7	FSM	ENSMUSG00000045193.14	ENSMUST00000105365.9	1321	7	61	0	-1	0	multi-exon	FALSE	canonical	3	285	junction_6	33.736314097555	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGCTCTGACCATTTCCC	6190	False	NA	NA	False	ATTAAA	-18	NA	80003672	80007489	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527_80006599_80006815
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014015	chr10	+	835	8	FSM	ENSMUSG00000045193.14	ENSMUST00000054666.7	834	8	-1	0	-1	0	multi-exon	FALSE	canonical	3	40	junction_6	141.847863313236	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCGACTCTGTGGCTTGG	6190	False	NA	NA	False	AATAAA	-17	NA	80003672	80008620	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527_80006599_80008247_80008347_80008470
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014018	chr10	+	1477	6	FSM	ENSMUSG00000045193.14	ENSMUST00000140774.2	912	6	-47	-518	-1	0	multi-exon	FALSE	canonical	3	335	junction_5	19.6936538001459	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGCTCTGACCATTTCCC	6190	False	NA	NA	False	ATTAAA	-18	NA	80003672	80007489	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014047	chr10	+	177	1	Intergenic	novelGene_490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAATACATTTGTGC	NA	False	NA	NA	False	NA	NA	NA	80039151	80039328	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_80039200_80039300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014055	chr10	+	214	1	Intergenic	novelGene_491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGCAGAGAGTATACTGG	78	False	NA	NA	False	NA	NA	NA	80047333	80047547	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_80047300_80047500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014059	chr10	+	229	1	Intergenic	novelGene_492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGTAACAGAATTTATAG	336	False	NA	NA	False	TTTAAA	-34	NA	80053524	80053753	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_80053500_80053800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014072	chr10	+	3371	13	FSM	ENSMUSG00000020156.17	ENSMUST00000125784.8	3392	13	22	-1	-3	0	multi-exon	FALSE	canonical	3	168	junction_1	107.02790394202	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATAGTCATTGCA	8461	False	NA	17	True	TATAAA	-15	NA	80062510	80079735	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_80062539_80064155_80064273_80064828_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014089	chr10	+	2478	14	NIC	ENSMUSG00000020156.17	novel	2640	14	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	97	junction_1	122.224887305831	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATAGTCATTGCA	8480	False	NA	17	True	TATAAA	-15	NA	80062529	80079735	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_+_80062641_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014095	chr10	+	777	8	FSM	ENSMUSG00000020153.15	ENSMUST00000020361.7	758	8	-17	-2	-14	0	multi-exon	FALSE	canonical	3	1255	junction_1	343.259525783067	412	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTTCTGTGTGGACT	9675	False	NA	25	True	AATAAA	-16	NA	80085268	80092628	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_80085326_80088230_80088268_80088907_80088992_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014117	chr10	+	2086	12	FSM	ENSMUSG00000069565.13	ENSMUST00000105362.8	2081	12	0	-5	0	5	multi-exon	FALSE	canonical	3	848	junction_9	77.3423216017195	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGTCTGCTTGTGTCTG	NA	False	NA	17	True	AATAAA	-26	NA	80100817	80124247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014122	chr10	+	2076	12	FSM	ENSMUSG00000069565.13	ENSMUST00000092305.6	1994	12	-82	0	8	0	multi-exon	FALSE	canonical	3	126	junction_4	263.9061002555	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGTGCTGTCTGCTTGT	NA	False	NA	12	True	AATAAA	-21	NA	80100825	80124242	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113405_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014139	chr10	+	533	4	FSM	ENSMUSG00000063457.15	ENSMUST00000068408.14	500	4	-33	0	-33	0	multi-exon	FALSE	canonical	3	5732	junction_1	1157.99510649513	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	6309	False	NA	30	True	AATAAA	-21	NA	80128253	80129948	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_80128318_80128608_80128695_80129475_80129711_80129800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014151	chr10	+	609	4	NNC	ENSMUSG00000063457.15	novel	500	4	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	3	409	junction_1	3639.28063709788	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	6367	False	NA	30	True	AATAAA	-21	NA	80128311	80129948	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_+_80128452_80128608_80128695_80129475_80129711_80129800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014167	chr10	+	1961	5	FSM	ENSMUSG00000035504.17	ENSMUST00000105357.2	2127	5	166	0	-26	0	multi-exon	FALSE	canonical	3	489	junction_4	47.9921868641136	266	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTGTGTCCGCTAAGCTG	7193	False	NA	18	True	AATAAA	-19	NA	80165952	80172275	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_80166180_80169336_80169431_80169522_80169662_80169799_80169969_80170943
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014183	chr10	+	188	1	Intergenic	novelGene_493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTGAACACTGAGCATC	2268	False	NA	NA	False	NA	NA	NA	80181989	80182177	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_80182000_80182200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014187	chr10	-	3296	2	FSM	ENSMUSG00000048696.12	ENSMUST00000105350.3	3266	2	-30	0	-30	0	multi-exon	FALSE	canonical	3	72	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGGCGTTCGCGTGGTG	NA	False	NA	0	True	AATAAA	-20	NA	80223523	80216188	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_80218456_80222494
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014206	chr10	-	1484	7	FSM	ENSMUSG00000035478.15	ENSMUST00000105349.8	1566	7	82	0	-46	0	multi-exon	FALSE	canonical	3	918	junction_6	141.458376288653	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTTGTCACTGTGTG	NA	False	NA	-4	True	AATAAA	-22	NA	80235302	80228372	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80235051
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014229	chr10	-	1560	6	NIC	ENSMUSG00000035478.15	novel	1566	7	NA	NA	-46	0	intron_retention	FALSE	canonical	3	918	junction_5	149.282818837266	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTTGTCACTGTGTG	NA	False	NA	-4	True	AATAAA	-22	NA	80235302	80228372	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80235051
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014243	chr10	-	458	3	FSM	ENSMUSG00000020163.13	ENSMUST00000020372.6	445	3	-12	-1	-12	1	multi-exon	FALSE	canonical	3	4161	junction_1	104.5	567	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTCCTTCCTCATCA	NA	False	NA	0	True	ATTAAA	-22	NA	80242676	80238829	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_80238990_80239969_80240121_80242529
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014263	chr10	-	2932	19	FSM	ENSMUSG00000020167.15	ENSMUST00000020379.13	2829	19	-18	-85	-6	6	multi-exon	TRUE	canonical	3	581	junction_5	199.277305392371	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTGATCTAAGGGT	NA	False	NA	-27	True	ATTAAA	-16	NA	80269487	80245374	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014283	chr10	-	2952	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105345.10	2950	19	-29	27	-29	6	multi-exon	FALSE	canonical	3	747	junction_5	176.383700711101	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTGATCTAAGGGT	NA	False	NA	-27	True	ATTAAA	-16	NA	80269510	80245374	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014305	chr10	-	2884	19	FSM	ENSMUSG00000020167.15	ENSMUST00000020377.13	2842	19	-27	-15	-1	15	multi-exon	FALSE	canonical	3	359	junction_12	305.080706788091	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCGTCATATTTCATGG	NA	False	NA	1	True	TATAAA	-29	NA	80269482	80245426	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014310	chr10	-	2878	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105344.8	2946	19	-11	79	-1	15	multi-exon	FALSE	canonical	3	359	junction_12	261.05737035618	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCGTCATATTTCATGG	NA	False	NA	1	True	TATAAA	-29	NA	80269482	80245426	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014313	chr10	-	2645	18	NIC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	-1	15	combination_of_known_splicesites	FALSE	canonical	3	76	junction_1	294.083868648568	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCGTCATATTTCATGG	NA	False	NA	1	True	TATAAA	-29	NA	80269482	80245426	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_80246109_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014353	chr10	-	4589	14	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	9	4	intron_retention	FALSE	canonical	3	315	junction_12	36.5310923742936	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCATAGTGTGTGGTGC	9430	False	NA	-1	True	AATAAA	-18	NA	80397385	80377493	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_80378316_80378398_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014355	chr10	-	4530	15	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	9	4	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	98.8862467480608	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCATAGTGTGTGGTGC	9430	False	NA	-1	True	AATAAA	-18	NA	80397385	80377493	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380279_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014356	chr10	-	4506	15	FSM	ENSMUSG00000047417.19	ENSMUST00000057910.16	5250	15	9	735	9	4	multi-exon	FALSE	canonical	3	315	junction_13	35.2049393566022	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCATAGTGTGTGGTGC	9430	False	NA	-1	True	AATAAA	-18	NA	80397385	80377493	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014390	chr10	-	1445	5	FSM	ENSMUSG00000003346.15	ENSMUST00000003436.12	1468	5	28	-5	2	5	multi-exon	TRUE	canonical	3	337	junction_4	42.7631558704453	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTCCTTTGTGGCTC	7826	False	NA	0	True	ATTAAA	-20	NA	80426147	80419482	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_80419898_80419976_80420157_80421441_80421637_80422348_80422865_80426008
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014405	chr10	+	1826	7	FSM	ENSMUSG00000113949.2	ENSMUST00000079883.12	1804	7	-16	-6	-8	6	multi-exon	FALSE	canonical	3	584	junction_5	41.6239781322684	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTATCTGTGGATGGGA	NA	False	NA	19	True	AATAAA	-19	NA	80438697	80451623	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_80438784_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014426	chr10	+	1761	7	NIC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	238.087285581477	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80438723	80451618	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_+_80438784_80444636_80444685_80445163_80445259_80445474_80445632_80446861_80446964_80448175_80448294_80450437
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014435	chr10	+	1399	2	FSM	ENSMUSG00000113640.2	ENSMUST00000038411.5	1411	2	12	0	-4	0	multi-exon	TRUE	canonical	3	56	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCGTTTGCACTCAGGT	NA	False	NA	3	True	AATAAA	-15	NA	80438725	80443488	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_80438784_80442147
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014443	chr10	+	2511	11	FSM	ENSMUSG00000003345.17	ENSMUST00000079773.14	2348	11	-155	-8	-155	0	multi-exon	FALSE	canonical	3	651	junction_8	40.2685981876698	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCCTGGGCTTTACCA	NA	False	NA	17	True	GGGGCT	-44	NA	80458516	80476583	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475068_80475413_80475498_80475601_80475709_80475855
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014445	chr10	+	2431	12	NIC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-155	1	combination_of_known_junctions	FALSE	canonical	3	537	junction_4	57.9097331204578	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCCTGGGCTTTACCAT	NA	False	NA	18	True	GGGGCT	-45	NA	80458516	80476584	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80473914_80473994_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475068_80475413_80475498_80475601_80475709_80475855
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014468	chr10	-	2471	9	FSM	ENSMUSG00000003344.15	ENSMUST00000126980.8	2449	9	-21	-1	-21	1	multi-exon	TRUE	canonical	3	325	junction_4	58.371118714652	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTATGTTGTCTGAGTGT	NA	False	NA	2	True	AATAAA	-27	NA	80492349	80478449	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_80479526_80479659_80479807_80480095_80480184_80480436_80480630_80481173_80481372_80482214_80482321_80483538_80483696_80484393_80484514_80491963
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014479	chr10	-	2454	9	NNC	ENSMUSG00000003344.15	novel	2449	9	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	161.952491104645	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGAGTGCTATGTTGTC	NA	False	NA	-5	True	AATAAA	-20	NA	80492326	80478456	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_-_80479526_80479659_80479820_80480095_80480184_80480436_80480630_80481173_80481372_80482214_80482321_80483538_80483696_80484393_80484514_80491963
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014480	chr10	-	2476	9	NIC	ENSMUSG00000003344.15	novel	3026	9	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_4	127.904994038544	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGAGTGCTATGTTGTC	NA	False	NA	-5	True	AATAAA	-20	NA	80492343	80478456	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_80479526_80479659_80479807_80480095_80480184_80480436_80480648_80481173_80481372_80482214_80482321_80483538_80483696_80484393_80484514_80491963
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014481	chr10	-	2732	8	NIC	ENSMUSG00000003344.15	novel	2449	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	325	junction_3	62.2047311016499	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGAGTGCTATGTTGTC	NA	False	NA	-5	True	AATAAA	-20	NA	80492328	80478456	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_80479526_80479659_80480184_80480436_80480630_80481173_80481372_80482214_80482321_80483538_80483696_80484393_80484514_80491963
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014492	chr10	+	207	1	Intergenic	novelGene_494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATATCTGTCTGTCTGT	2911	False	NA	NA	False	NA	NA	NA	80497775	80497982	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_80497800_80498000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014515	chr10	-	3441	14	FSM	ENSMUSG00000020190.14	ENSMUST00000200082.5	3439	14	0	-2	0	2	multi-exon	FALSE	canonical	3	105	junction_13	111.384031022692	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGCAGTGACAGCAGCA	9981	False	NA	-44	True	AATAAA	-16	NA	80512127	80501158	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511914
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014516	chr10	-	3458	14	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_12	131.855892289124	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGCAGTGACAGCAGCA	9981	False	NA	-44	True	AATAAA	-16	NA	80512127	80501158	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507909_80511657_80511775_80511956
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014522	chr10	-	3579	13	ISM	ENSMUSG00000020190.14	ENSMUST00000200082.5	3439	14	0	0	0	0	intron_retention	FALSE	canonical	3	433	junction_2	27.8601417799695	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGCAGTGACAGCAG	9981	False	NA	-46	True	AATAAA	-14	NA	80512127	80501160	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014547	chr10	-	4798	31	FSM	ENSMUSG00000020198.9	ENSMUST00000020420.9	4805	31	7	0	7	0	multi-exon	FALSE	canonical	1	82	junction_14	55.4957555934586	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTTGTGTCCCCAT	9215	False	NA	-2	True	ATTAAA	-14	NA	80578091	80542789	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014558	chr10	+	191	1	Intergenic	novelGene_495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTTTAAGGAGATGGTT	NA	False	NA	NA	False	NA	NA	NA	80578948	80579139	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_80578900_80579100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014573	chr10	+	192	1	Intergenic	novelGene_496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAAAGAAAGGTGTAAG	75	False	NA	NA	False	NA	NA	NA	80602983	80603175	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_80603000_80603200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014577	chr10	-	1207	6	FSM	ENSMUSG00000035278.10	ENSMUST00000036805.7	1260	6	57	-4	-9	4	multi-exon	FALSE	canonical	3	943	junction_2	140.821021158064	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCGGAATGAGTGGAGAAG	NA	False	NA	1	True	AATAAA	-21	NA	80634403	80631928	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633674_80633743_80633812_80633914
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014591	chr10	-	1021	4	NIC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	-46	0	intron_retention	FALSE	canonical	3	953	junction_3	134.254319193917	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634074	80631932	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_80632357_80632424_80632657_80633606_80633812_80633914
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014593	chr10	-	838	6	NIC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	211	junction_2	375.955529285047	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634074	80631932	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_80632357_80632424_80632453_80632565_80632657_80633606_80633674_80633743_80633812_80633914
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014612	chr10	+	1725	9	NNC	ENSMUSG00000020211.16	novel	2213	9	NA	NA	-100	0	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_1	429.244230450451	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGCTGTGTGTTT	4786	False	NA	29	True	ATTAAA	-17	NA	80634465	80640758	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_+_80634586_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639653_80639723_80639805
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014616	chr10	+	1779	9	FSM	ENSMUSG00000020211.16	ENSMUST00000148665.8	2213	9	438	-4	-96	4	multi-exon	FALSE	canonical	3	1171	junction_7	118.037004261376	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCTGTGTGTTTGGTA	4790	False	NA	33	True	ATTAAA	-21	NA	80634469	80640762	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_80634640_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639653_80639723_80639805
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014644	chr10	+	1023	5	NIC	ENSMUSG00000035242.16	novel	1044	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	460	junction_4	2987.93005272881	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTGTGTCCTGCTGC	NA	False	NA	19	True	AATAAA	-19	NA	80662519	80665124	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_+_80662740_80664070_80664217_80664294_80664468_80664544_80664631_80664726
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014645	chr10	+	1119	4	NIC	ENSMUSG00000035242.16	novel	1044	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	7082	junction_2	297.278021761149	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTGTGTCCTGCTGC	NA	False	NA	19	True	AATAAA	-19	NA	80662519	80665124	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_+_80662740_80664070_80664217_80664294_80664468_80664544
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014647	chr10	+	1034	5	NIC	ENSMUSG00000035242.16	novel	1044	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	233	junction_1	2913.0790733346	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTGTGTCTTGTGTCCT	NA	False	NA	14	True	AATAAA	-14	NA	80662519	80665119	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_+_80662740_80664076_80664217_80664294_80664468_80664544_80664631_80664704
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014679	chr10	-	470	4	FSM	ENSMUSG00000035215.10	ENSMUST00000035775.9	468	4	2	-4	2	0	multi-exon	FALSE	canonical	3	2872	junction_3	751.769616009822	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTCTGTAACTTTGATC	NA	False	NA	-9	True	AATAAA	-29	NA	80691041	80688654	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_80688935_80689591_80689664_80690451_80690543_80691014
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014685	chr10	-	1592	2	FSM	ENSMUSG00000035215.10	ENSMUST00000218931.2	785	2	-9	-798	7	-2	multi-exon	FALSE	canonical	3	4552	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTCTGTAACTTTGA	NA	False	NA	-11	True	AATAAA	-27	NA	80691036	80688656	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_80689664_80690451
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014705	chr10	+	189	1	Intergenic	novelGene_497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAACAAATAGGTCACC	NA	False	NA	NA	False	NA	NA	NA	80722798	80722987	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_80722800_80723000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014714	chr10	-	854	3	FSM	ENSMUSG00000020219.8	ENSMUST00000020440.7	1225	3	155	216	-29	-216	multi-exon	FALSE	canonical	3	3643	junction_2	39.5	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGTCTGCCCAGCACTT	5603	False	NA	-1	True	NA	NA	NA	80736648	80735499	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_80736094_80736315_80736385_80736457
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014722	chr10	-	544	3	FSM	ENSMUSG00000020219.8	ENSMUST00000219896.2	542	3	-7	5	-7	-5	multi-exon	FALSE	canonical	3	269	junction_2	1726.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGCGTGTCACCTCACTG	5625	False	NA	-12	True	AATAAA	-20	NA	80736626	80735742	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_80736094_80736315_80736385_80736502
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014724	chr10	-	3389	12	FSM	ENSMUSG00000062075.14	ENSMUST00000179022.8	3370	12	-17	-2	-17	2	multi-exon	FALSE	canonical	3	226	junction_8	24.5238962565761	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCAGAGTAGATCTTCAGA	3094	False	NA	1	True	AATAAA	-19	NA	80754096	80737195	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740223_80740386_80740608_80740719_80740846_80740914_80741086_80742984_80743111_80743218_80743376_80745742_80745880_80753797
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014738	chr10	+	1286	4	FSM	ENSMUSG00000015312.10	ENSMUST00000015456.10	1284	4	-2	0	-2	0	multi-exon	FALSE	canonical	3	88	junction_3	10.2089285540757	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTCTCGTTGTATTTTA	246	False	NA	5	True	AATAAA	-14	NA	80765904	80768038	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_80766194_80766281_80766384_80766862_80767086_80767366
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014747	chr10	+	185	1	Intergenic	novelGene_498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATCAGAATTTCA	NA	False	NA	NA	False	NA	NA	NA	80778219	80778404	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_80778200_80778400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014764	chr10	-	2004	12	FSM	ENSMUSG00000004937.7	ENSMUST00000218208.2	1964	12	-28	-12	-25	10	multi-exon	TRUE	canonical	3	688	junction_11	105.465203223192	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTGTCAGCCTCTTG	4744	False	NA	-1	True	AATAAA	-27	NA	80896040	80879898	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888086_80895961
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014779	chr10	-	2157	12	NIC	ENSMUSG00000004937.7	novel	1969	12	NA	NA	-8	4	combination_of_known_junctions	FALSE	canonical	3	99	junction_11	332.810024483479	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCTTCCTGTGTCAGC	4798	False	NA	-7	True	AATAAA	-21	NA	80895986	80879904	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886921_80887056_80887164_80887949_80888086_80895751
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014781	chr10	-	2000	12	FSM	ENSMUSG00000004937.7	ENSMUST00000005067.6	1969	12	-27	-4	-24	4	multi-exon	FALSE	canonical	3	182	junction_9	245.943486083912	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCTTCCTGTGTCAGC	4745	False	NA	-7	True	AATAAA	-21	NA	80896039	80879904	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886921_80887056_80887164_80887949_80888086_80895961
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014799	chr10	+	2490	13	FSM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	8	334	8	-334	multi-exon	TRUE	canonical	3	459	junction_3	51.2387521532504	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCCTCTCTCTGTACT	5458	False	NA	15	True	ATTAAA	-21	NA	80905876	80918059	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_80906113_80908986_80909200_80911344_80911494_80912776_80912885_80913746_80913850_80914303_80914465_80915291_80915428_80915704_80916072_80916246_80916449_80916860_80917048_80917140_80917270_80917433_80917571_80917697
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014825	chr10	+	1565	11	FSM	ENSMUSG00000035027.19	ENSMUST00000143517.8	2405	11	26	814	-6	0	multi-exon	FALSE	canonical	3	212	junction_7	154.06131896099	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGGCTGTGCTCCTGCC	1126	False	NA	13	True	NA	NA	NA	80941774	80959717	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955538_80956876_80956945_80957736_80957799_80958400_80958447_80959453
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014835	chr10	+	199	1	Intergenic	novelGene_499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGCTTTGAGAAAACTAT	8870	False	NA	NA	False	NA	NA	NA	80949518	80949717	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_80949500_80949700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014839	chr10	+	220	1	Intergenic	novelGene_500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	314	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGATGCTCGATGGAA	NA	False	NA	NA	False	NA	NA	NA	80952689	80952909	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_80952700_80952900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014870	chr10	+	206	1	Intergenic	novelGene_501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGGCCTTTCAGAATGG	6128	False	NA	NA	False	NA	NA	NA	81006846	81007052	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_81006800_81007100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014874	chr10	+	3151	14	FSM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	-51	-11	-51	11	multi-exon	TRUE	canonical	3	5618	junction_10	706.418033369635	4774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTTGTACAGCGCAC	2130	False	NA	43	True	AATAAA	-31	NA	81012413	81018343	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014882	chr10	+	3337	13	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	15	0	15	0	intron_retention	FALSE	canonical	3	5618	junction_10	657.372357698943	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTCGCAACTCTGTTTT	2196	False	NA	32	True	AATAAA	-20	NA	81012479	81018332	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014883	chr10	+	2997	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_6	1963.35766017686	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTCGCAACTCTGTTTT	2196	False	NA	32	True	AATAAA	-20	NA	81012479	81018332	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015209_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014892	chr10	+	3016	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	3	152	junction_13	1878.32510687064	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTCGCAACTCTGTTTT	2196	False	NA	32	True	AATAAA	-20	NA	81012479	81018332	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017402_81017722
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014905	chr10	+	2513	10	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	2318	0	-1086	0	3prime_fragment	FALSE	canonical	3	5618	junction_6	791.628248580492	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTCGCAACTCTGTTTT	4499	False	NA	32	True	AATAAA	-20	NA	81014782	81018332	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr10_+_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014921	chr10	+	1533	9	FSM	ENSMUSG00000034974.14	ENSMUST00000178422.9	1730	9	4	193	4	21	multi-exon	FALSE	canonical	3	321	junction_1	26.7675176286483	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCTCCCACGCCCCGC	8559	False	NA	16	True	AATAAA	-21	NA	81018842	81028838	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_81018931_81019809_81019910_81025772_81026134_81026215_81026346_81026431_81026481_81026875_81026903_81027592_81027746_81028130_81028177_81028259
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014930	chr10	+	189	1	Intergenic	novelGene_502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATGTTAACGAGAAAGGA	5881	False	NA	NA	False	NA	NA	NA	81063406	81063595	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_81063400_81063600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014937	chr10	+	183	1	Intergenic	novelGene_503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGTCTTGAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	81091947	81092130	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_81091900_81092100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014942	chr10	-	604	3	FSM	ENSMUSG00000034932.5	ENSMUST00000046114.5	604	3	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_1	11.5	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTCATGCCCTGTG	3094	False	NA	0	True	AATAAA	-29	NA	81102768	81100546	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_81100832_81101484_81101642_81102606
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014954	chr10	+	2072	11	FSM	ENSMUSG00000004931.12	ENSMUST00000057798.9	2106	11	24	10	11	0	multi-exon	FALSE	canonical	3	174	junction_1	25.7441255435099	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTGGTCAGAAGCTTGA	1344	False	NA	18	True	TATAAA	-21	NA	81104029	81109070	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_81104154_81104612_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014977	chr10	-	3023	21	NIC	ENSMUSG00000034917.9	novel	3024	21	NA	NA	-31	7	combination_of_known_junctions	TRUE	canonical	0	0	junction_20	33.8096140173176	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAGACTGAGGACTCTTT	7809	False	NA	15	True	AATAAA	-34	NA	81121646	81109033	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119440_81119516_81119574_81121434
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014994	chr10	+	4279	18	FSM	ENSMUSG00000034902.18	ENSMUST00000105327.10	2551	18	-8	-1720	-8	1	multi-exon	FALSE	canonical	3	84	junction_16	35.5956725335284	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTCTCCGGTGACTTAT	4984	False	NA	NA	False	AATAAA	-17	NA	81128805	81155808	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153159_81153238_81153599
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000014997	chr10	+	4199	17	FSM	ENSMUSG00000034902.18	ENSMUST00000163075.8	4208	17	11	-2	-6	1	multi-exon	FALSE	canonical	3	97	junction_16	27.8766815636295	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTCTCCGGTGACTTAT	4986	False	NA	NA	False	AATAAA	-17	NA	81128807	81155808	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153599
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015030	chr10	-	1546	10	FSM	ENSMUSG00000020232.18	ENSMUST00000105324.9	1540	10	-1	-5	-1	2	multi-exon	FALSE	canonical	3	76	junction_9	161.527966465926	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAATATTTGTGGCTTTGG	NA	False	NA	-6	True	AATAAA	-22	NA	81186261	81181879	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967_81186024_81186106
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015034	chr10	-	1446	10	FSM	ENSMUSG00000020232.18	ENSMUST00000105323.8	1463	10	19	-2	-17	2	multi-exon	FALSE	canonical	3	169	junction_9	133.860992944542	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAATATTTGTGGCTTTGG	NA	False	NA	-6	True	AATAAA	-22	NA	81186295	81181879	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967_81186024_81186240
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015035	chr10	-	1634	9	FSM	ENSMUSG00000020232.18	ENSMUST00000020454.11	1621	9	-8	-5	-6	2	multi-exon	FALSE	canonical	3	490	junction_7	50.249222630803	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAATATTTGTGGCTTTGG	NA	False	NA	-6	True	AATAAA	-22	NA	81186266	81181879	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015055	chr10	-	1697	9	NIC	ENSMUSG00000020232.18	novel	1463	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	169	junction_8	141.437044298868	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTTAATATTTGTGGC	NA	False	NA	-11	True	AATAAA	-17	NA	81186261	81181884	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81185323_81185967_81186024_81186240
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015081	chr10	+	1448	5	FSM	ENSMUSG00000078440.11	ENSMUST00000072751.13	1444	5	-4	0	-4	0	multi-exon	FALSE	canonical	3	742	junction_3	32.2286751201473	485	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGGCTCCTGCTGTGTG	NA	False	NA	15	True	AATAAA	-19	NA	81220257	81224186	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_81220413_81221552_81221882_81222246_81222324_81223073_81223315_81223540
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015097	chr10	-	3514	10	FSM	ENSMUSG00000055053.19	ENSMUST00000020461.15	3348	10	12	-178	12	178	multi-exon	TRUE	canonical	3	18	junction_9	5.66557723732532	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGTATTTCTATTTGTA	3924	False	NA	0	True	AATAAA	-16	NA	81262995	81234793	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_81236906_81239185_81239263_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81256100_81256633_81262909
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015104	chr10	+	177	1	Intergenic	novelGene_504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGGTATTTTCCTCAT	6223	False	NA	NA	False	NA	NA	NA	81274461	81274638	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_81274500_81274600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015132	chr10	-	2948	13	NIC	ENSMUSG00000020238.15	novel	3118	14	NA	NA	-21	-2	intron_retention	TRUE	canonical	3	345	junction_12	32.4987179234299	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGCCTCCAGGTGTCCTG	NA	False	NA	-32	True	AATAAA	-16	NA	81332197	81322292	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015140	chr10	-	1039	2	FSM	ENSMUSG00000034792.9	ENSMUST00000147908.2	1046	2	0	7	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCAGGGAACTGAGGAAG	6420	False	NA	NA	False	AATAAA	-18	NA	81344007	81338146	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_81338940_81343761
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015144	chr10	+	180	1	Intergenic	novelGene_505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATAGAGACGTTGC	1877	False	NA	NA	False	NA	NA	NA	81342735	81342915	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_81342700_81342900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015154	chr10	-	3386	7	FSM	ENSMUSG00000034781.6	ENSMUST00000043604.6	3414	7	28	0	28	0	multi-exon	FALSE	canonical	3	370	junction_6	26.2339898266013	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTTTGTGATTATTAGT	4251	False	NA	0	True	AATAAA	-19	NA	81380996	81364557	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229_81368359_81369085_81369241_81370913_81371099_81380625
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015167	chr10	+	1488	7	FSM	ENSMUSG00000054452.11	ENSMUST00000002518.9	1411	7	-75	-2	-69	2	multi-exon	FALSE	canonical	3	2772	junction_6	274.064925397858	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTGTCCCTGCTTCTGT	159	False	NA	16	True	AATAAA	-18	NA	81395252	81402198	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015171	chr10	+	1466	7	NIC	ENSMUSG00000054452.11	novel	1411	7	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	368	junction_6	1051.93209804098	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGTGTCCCTGCTTCT	-1	True	NA	14	True	AATAAA	-16	NA	81395269	81402196	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401308
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015186	chr10	-	1990	14	FSM	ENSMUSG00000034758.13	ENSMUST00000072020.9	2015	14	26	-1	1	0	multi-exon	TRUE	canonical	3	36	junction_10	15.2183321404185	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTGTCCTTTACCCAG	NA	False	NA	-14	True	NA	NA	NA	81436708	81426737	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431240_81431313_81431390_81431678_81432090_81434444_81434491_81434910_81434973_81435868_81435950_81436631
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015206	chr10	-	1675	8	FSM	ENSMUSG00000034748.17	ENSMUST00000042923.9	1891	8	216	0	-15	0	multi-exon	FALSE	canonical	3	197	junction_1	20.6723713873254	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGTTACATTTATGTA	9874	False	NA	-11	True	AATAAA	-25	NA	81463415	81457620	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462323_81462452_81463305
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015230	chr10	+	201	1	Intergenic	novelGene_506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAGACAACTGTCAGTTG	NA	False	NA	NA	False	NA	NA	NA	81757881	81758082	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_81757900_81758100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015245	chr10	-	192	2	Intergenic	novelGene_507	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	439	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATACAAAGCTTAGACCCA	NA	False	NA	NA	False	NA	NA	NA	81879621	81873334	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_81873475_81879569
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015269	chr10	-	241	1	Intergenic	novelGene_508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGCACTCGGGAGGCAG	8459	False	NA	NA	False	NA	NA	NA	81977946	81977705	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_81977700_81977900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015272	chr10	-	2040	4	FSM	ENSMUSG00000062931.16	ENSMUST00000041264.15	2035	4	-5	0	2	0	multi-exon	FALSE	canonical	3	32	junction_1	52.6898683071254	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTTATGTTGTCATTA	NA	False	NA	NA	False	NA	NA	NA	82077112	82060683	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_82062428_82063364_82063426_82063632_82063760_82077004
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015278	chr10	+	182	1	Intergenic	novelGene_509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTTTAAAAAGTCACAA	6888	False	NA	NA	False	NA	NA	NA	82185223	82185405	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_82185200_82185400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015284	chr10	+	3414	4	FSM	ENSMUSG00000073427.5	ENSMUST00000210381.2	3330	4	-77	-7	-16	7	multi-exon	FALSE	canonical	3	117	junction_3	14.0554457615387	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATGTTGTCATCCATT	NA	False	NA	10	True	AATAAA	-22	NA	82190072	82215477	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_82190216_82204404_82204532_82204731_82204793_82212394
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015295	chr10	+	187	1	Intergenic	novelGene_510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTAAATTTTGTATTCAT	NA	False	NA	18	True	NA	NA	NA	82444255	82444442	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_82444300_82444400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015300	chr10	-	598	3	FSM	ENSMUSG00000063320.12	ENSMUST00000183363.2	406	3	-17	-175	-11	0	multi-exon	FALSE	canonical	3	187	junction_2	131	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTACTATACATTCTTGG	NA	False	NA	0	True	NA	NA	NA	82459041	82455684	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_82456052_82458541_82458659_82458927
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015342	chr10	+	3412	15	Fusion	ENSMUSG00000056821.14_ENSMUSG00000020250.12	novel	894	3	NA	NA	-2464	0	multi-exon	FALSE	canonical	1	13	junction_1	270.342828456682	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	15	True	AATAAA	-16	NA	82645492	82733546	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr10_+_82645609_82654864_82654958_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015349	chr10	+	3370	15	Fusion	ENSMUSG00000056821.14_ENSMUSG00000020250.12	novel	894	3	NA	NA	-61	0	multi-exon	FALSE	canonical	1	47	junction_2	264.185193238627	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	15	True	AATAAA	-16	NA	82647895	82733546	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr10_+_82647970_82654864_82654958_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015371	chr10	+	3320	14	FSM	ENSMUSG00000020250.12	ENSMUST00000020484.9	3325	14	5	0	5	0	multi-exon	FALSE	canonical	1	113	junction_1	208.745903123884	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	15	True	AATAAA	-16	NA	82695017	82733546	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_82695135_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015381	chr10	+	3478	16	NNC	ENSMUSG00000020250.12	novel	2297	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_2	261.243658083577	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	15	True	AATAAA	-16	NA	82695041	82733546	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_+_82695135_82696357_82696465_82708771_82708847_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015394	chr10	+	188	1	Intergenic	novelGene_511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAGGAGCCATTAT	NA	False	NA	NA	False	NA	NA	NA	82751201	82751389	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_82751200_82751400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015405	chr10	+	188	1	Intergenic	novelGene_512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGCCATGTATATTTTT	NA	False	NA	NA	False	NA	NA	NA	83155267	83155455	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_83155300_83155500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015409	chr10	+	208	1	Intergenic	novelGene_513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTAATGAATTTAACTG	NA	False	NA	NA	False	NA	NA	NA	83187881	83188089	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_83187900_83188100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015415	chr10	+	3514	4	FSM	ENSMUSG00000020255.9	ENSMUST00000020488.9	123179	4	1	119664	1	-119664	multi-exon	FALSE	canonical	3	119	junction_1	5.24933858267454	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTGGTGGCACATTCTT	NA	False	NA	23	True	TTTAAA	-12	NA	83196085	83204705	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_83196238_83197910_83197998_83200242_83200380_83201567
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015443	chr10	-	3001	21	FSM	ENSMUSG00000020263.15	ENSMUST00000020500.14	3020	21	19	0	19	0	multi-exon	FALSE	canonical	3	74	junction_1	12.9324205004322	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTATTGTGGTTAGTTT	NA	False	NA	0	True	AATAAA	-18	NA	83484583	83435896	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_83436906_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83446931_83447006_83447064_83447313_83447357_83448575_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015457	chr10	-	186	1	Intergenic	novelGene_514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGGGGCATCAAACACT	6511	False	NA	NA	False	NA	NA	NA	83527624	83527438	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_83527400_83527600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015463	chr10	-	186	1	Intergenic	novelGene_515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTGTACCTTACTGAAGG	NA	False	NA	NA	False	NA	NA	NA	84310796	84310610	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_84310600_84310800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015478	chr10	-	185	1	Intergenic	novelGene_516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTAAAAATTAAGAATCAC	9804	False	NA	NA	False	NA	NA	NA	84388857	84388672	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_84388700_84388900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015486	chr10	+	4975	28	FSM	ENSMUSG00000034453.9	ENSMUST00000077175.7	4975	28	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_10	22.7726281441689	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCTGAGAGGTGATGT	NA	False	NA	22	True	NA	NA	NA	84458155	84563042	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015504	chr10	+	190	1	Intergenic	novelGene_517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGGCTCAGGAGTTAAG	NA	False	NA	NA	False	NA	NA	NA	84879096	84879286	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_84879100_84879300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015505	chr10	+	185	1	Intergenic	novelGene_518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCTGTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	84908358	84908543	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_84908400_84908500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015524	chr10	-	3049	13	FSM	ENSMUSG00000020038.11	ENSMUST00000020227.11	3026	13	-23	0	-23	0	multi-exon	FALSE	canonical	3	194	junction_12	27.3651999200932	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGTGTACTTGTGTTCAT	NA	False	NA	-5	True	ATTAAA	-19	NA	85020951	84967563	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_84968172_84968914_84969023_84969105_84969178_84978879_84979033_84979502_84979706_84980017_84980170_84982207_84982520_84982599_84982741_84983770_84983860_84984477_84984663_84987076_84987220_84992949_84993059_85020177
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015536	chr10	+	224	1	Intergenic	novelGene_519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAGAATATTGCAATCAC	NA	False	NA	NA	False	AAGAAA	-32	NA	84993601	84993825	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_84993600_84993800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015547	chr10	+	5748	17	FSM	ENSMUSG00000020042.16	ENSMUST00000105307.8	5788	17	40	0	27	0	multi-exon	TRUE	canonical	3	26	junction_1	8.15379512865022	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCATCCTCTTTATGGT	NA	False	NA	13	True	ATTAAA	-18	NA	85222717	85496156	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_85224343_85382305_85382456_85397368_85397574_85434588_85434742_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015553	chr10	-	178	1	Intergenic	novelGene_520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCGAAGCAAGCGGGTCTG	NA	False	NA	NA	False	NA	NA	NA	85379129	85378951	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_85379000_85379100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015558	chr10	+	190	1	Intergenic	novelGene_521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGAGTTGCACAGT	NA	False	NA	NA	False	NA	NA	NA	85513959	85514149	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_85514000_85514100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015566	chr10	-	213	1	Intergenic	novelGene_522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCATCCATGACATTTCAA	NA	False	NA	NA	False	NA	NA	NA	85637805	85637592	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_85637600_85637800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015568	chr10	+	2593	15	FSM	ENSMUSG00000001785.14	ENSMUST00000001836.11	2572	15	-9	-12	-9	12	multi-exon	FALSE	canonical	3	284	junction_1	18.5957258639765	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGACTTCACTCTTATTT	NA	False	NA	20	True	AATAAA	-31	NA	85707685	85724972	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_85707879_85710141_85710201_85710312_85710498_85712161_85712248_85712349_85712447_85714342_85714454_85715125_85715257_85715693_85715756_85717866_85717964_85718734_85718797_85720326_85720439_85721473_85721565_85721660_85721783_85723086_85723193_85723893
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015577	chr10	-	3961	12	FSM	ENSMUSG00000035529.11	ENSMUST00000220032.2	3962	12	3	-2	3	2	multi-exon	FALSE	canonical	3	39	junction_6	54.6866354713247	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATTTGTCATGATCTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	85752847	85727827	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740135_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015643	chr10	-	3278	17	NIC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	47	0	intron_retention	FALSE	canonical	3	2860	junction_10	341.129717812741	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTGCTTATTTTCATAA	NA	False	NA	-40	True	AATAAA	-16	NA	86541326	86526703	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015652	chr10	+	5948	14	FSM	ENSMUSG00000054027.9	ENSMUST00000099396.3	5952	14	-4	8	-4	-8	multi-exon	FALSE	canonical	3	23	junction_13	8.52632540148867	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTGGTATGTGTGTTAG	NA	False	NA	4	True	AATAAA	-14	NA	86614864	86674245	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_86615176_86640644_86640830_86647393_86647469_86648188_86648245_86651717_86651809_86652816_86652955_86656070_86656132_86656531_86656635_86656773_86656876_86658927_86659010_86660050_86660138_86661018_86661160_86667563_86667629_86669794
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015666	chr10	+	1270	10	FSM	ENSMUSG00000035351.17	ENSMUST00000052355.15	1267	10	2	-5	2	5	multi-exon	FALSE	canonical	3	484	junction_1	64.7921653547559	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCCTATTGTGTTGGTGT	NA	False	NA	17	True	AATAAA	-25	NA	87982855	88014257	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_87982935_87984023_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010430_88010744_88010796_88012934_88013029_88013995
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015677	chr10	+	1296	10	FSM	ENSMUSG00000035351.17	ENSMUST00000169309.3	1277	10	-14	-5	-14	3	multi-exon	FALSE	canonical	3	51	junction_1	172.048514547568	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTCCTATTGTGTTGGT	NA	False	NA	15	True	AATAAA	-23	NA	87982924	88014255	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_87983032_87984023_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010430_88010744_88010796_88012934_88013029_88013995
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015688	chr10	+	847	7	FSM	ENSMUSG00000020056.17	ENSMUST00000020248.16	1052	7	56	149	3	2	multi-exon	FALSE	canonical	3	318	junction_4	34.2377309736236	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTTTGTTGACCAAATA	NA	False	NA	16	True	AATAAA	-19	NA	88037010	88081871	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_88037155_88037673_88037773_88049508_88049575_88051828_88051937_88055111_88055223_88070255_88070321_88081617
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015698	chr10	+	177	1	Intergenic	novelGene_523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAATAAAAATATCAA	NA	False	NA	NA	False	NA	NA	NA	88199199	88199376	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_88199200_88199400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015717	chr10	+	1045	9	FSM	ENSMUSG00000020059.10	ENSMUST00000020252.10	1139	9	95	-1	0	0	multi-exon	FALSE	canonical	3	104	junction_4	7.47391296443837	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTTTCAGTATATC	NA	False	NA	4	True	AATAAA	-16	NA	88295525	88309098	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88302300_88302419_88303144_88303245_88305407_88305507_88308537_88308643_88308766
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015718	chr10	+	927	8	FSM	ENSMUSG00000020059.10	ENSMUST00000123244.8	927	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	38.7767024521326	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTTTCAGTATATC	NA	False	NA	4	True	AATAAA	-16	NA	88295525	88309098	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88303144_88303245_88305407_88305507_88308537_88308643_88308766
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015732	chr10	-	1456	9	FSM	ENSMUSG00000060002.15	ENSMUST00000117440.8	4863	9	108	3299	5	4	multi-exon	FALSE	canonical	3	79	junction_1	46.4837001001426	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATATTTCTGCAATATAA	4129	False	NA	-3	True	AATAAA	-22	NA	88339827	88308674	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_88308847_88311287_88311399_88312209_88312336_88312871_88313031_88316676_88316809_88318092_88318178_88324243_88324386_88325442_88325591_88339446
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015742	chr10	-	3230	8	FSM	ENSMUSG00000060002.15	ENSMUST00000020253.15	3898	8	5	663	5	-641	multi-exon	FALSE	canonical	3	100	junction_3	42.2794396889098	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGATTCTGTAAGGTTCTTT	4129	False	NA	NA	False	AATAAA	-16	NA	88339827	88309341	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_88311399_88312209_88312336_88312871_88313031_88316676_88316809_88318092_88318178_88324243_88324386_88325442_88325591_88339446
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015747	chr10	-	1685	5	NIC	ENSMUSG00000004359.17	novel	1763	6	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	169	junction_4	139.833829955415	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	88520894	88510633	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_88511933_88513361_88513471_88514385_88514499_88515720_88515818_88520827
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015748	chr10	-	1783	6	FSM	ENSMUSG00000004359.17	ENSMUST00000138734.2	646	6	-19	-1118	-19	0	multi-exon	FALSE	canonical	3	380	junction_4	47.5815090134813	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	88520896	88510633	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_88511933_88513361_88513471_88514385_88514499_88515720_88515818_88516340_88516437_88520827
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015752	chr10	-	1671	5	NIC	ENSMUSG00000004359.17	novel	1763	6	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	3	38	junction_1	186.499329757509	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	88520893	88510633	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_88511933_88514385_88514499_88515720_88515818_88516340_88516437_88520827
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015753	chr10	-	2695	5	NIC	ENSMUSG00000004359.17	novel	1763	6	NA	NA	-16	0	intron_retention	FALSE	canonical	3	380	junction_3	53.1859943970215	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	88520893	88510633	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_88511933_88513361_88514499_88515720_88515818_88516340_88516437_88520827
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015798	chr10	-	8840	62	FSM	ENSMUSG00000004356.9	ENSMUST00000004470.9	8821	62	-19	0	-19	0	multi-exon	TRUE	canonical	3	123	junction_48	34.745281900583	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGCCTGAAAGACTATG	NA	False	NA	-1	True	ATTAAA	-16	NA	88662685	88582468	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_88582922_88583137_88583284_88584087_88584215_88585121_88585404_88586513_88586586_88587206_88587395_88588768_88588902_88589497_88589630_88590338_88590522_88590612_88590683_88591049_88591130_88592886_88592998_88593718_88593851_88594165_88594337_88596731_88596849_88597604_88597747_88598630_88598798_88600535_88600704_88601272_88601372_88602924_88603082_88603314_88603455_88604496_88604787_88606233_88606317_88606546_88606687_88607723_88607862_88608289_88608431_88608713_88608870_88610533_88610687_88610786_88610838_88611070_88611215_88612025_88612114_88613266_88613412_88614084_88614309_88616809_88616890_88618434_88618579_88621851_88622061_88623316_88623484_88626912_88627039_88627545_88627632_88628460_88628552_88631238_88631428_88634142_88634384_88634545_88634626_88636978_88637056_88640384_88640544_88641997_88642061_88643188_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88649778_88649958_88651730_88651809_88652739_88652875_88653040_88653188_88653727_88653884_88654350_88654489_88655129_88655212_88656688_88656878_88657601_88657735_88657865_88657933_88661279_88661361_88662467
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015813	chr10	-	1724	11	FSM	ENSMUSG00000019948.5	ENSMUST00000020109.5	1705	11	-16	-3	-16	3	multi-exon	FALSE	canonical	3	269	junction_5	22.702422778197	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTTAATGTTTATCT	NA	False	NA	-15	True	AATAAA	-24	NA	89568173	89547829	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_89548423_89550731_89550871_89552934_89553107_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89561766_89562498_89562623_89564015_89564085_89564761_89564880_89568035
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015829	chr10	+	6568	22	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	36.4327728669602	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTTTGTCCGATTGGTT	NA	False	NA	21	True	TATAAA	-32	NA	89580866	89655733	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_+_89581151_89591282_89591417_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015841	chr10	+	202	1	Intergenic	novelGene_524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGGCTTAAGGAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89637657	89637859	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_89637700_89637900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015847	chr10	+	189	1	Intergenic	novelGene_525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATAGTAGCCTTAATTA	4071	False	NA	NA	False	NA	NA	NA	89690464	89690653	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_89690500_89690700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015848	chr10	+	353	1	Intergenic	novelGene_526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGAGGAAATTGCCACAC	NA	False	NA	NA	False	AGTAAA	-41	NA	89714110	89714463	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_89714100_89714500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015858	chr10	+	176	1	Intergenic	novelGene_527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATAATGAAATAAAGGATA	NA	False	NA	NA	False	NA	NA	NA	90814849	90815025	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_90814800_90815000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015872	chr10	+	3700	3	FSM	ENSMUSG00000019975.13	ENSMUST00000020149.6	3232	3	-19	-449	-19	449	multi-exon	FALSE	canonical	3	50	junction_2	27	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCACCTAATTATTTGTA	736	False	NA	NA	False	AATAAA	-16	NA	90918899	90934968	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_90919159_90929000_90929119_90931645
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015888	chr10	+	187	1	Intergenic	novelGene_528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGACTATAAGTGTTTC	8031	False	NA	NA	False	NA	NA	NA	90926194	90926381	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_90926200_90926400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015893	chr10	-	1594	8	FSM	ENSMUSG00000061904.13	ENSMUST00000076694.13	1612	8	18	0	18	0	multi-exon	FALSE	canonical	1	1248	junction_7	1021.77973983373	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAGTTTTATTTTTTTGA	NA	False	NA	0	True	ATTAAA	-18	NA	90959903	90952435	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90957906_90959419_90959569_90959777
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015909	chr10	-	2856	7	NIC	ENSMUSG00000061904.13	novel	1395	8	NA	NA	-3	0	intron_retention	FALSE	canonical	1	1248	junction_6	1076.15746472758	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGAGTTTGTTATTT	NA	False	NA	-4	True	AATAAA	-16	NA	90959868	90952652	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90959569_90959777
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015924	chr10	-	223	1	Intergenic	novelGene_529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTATCTATCTGTAATTT	NA	False	NA	NA	False	TTTAAA	-3	NA	90964520	90964297	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_90964300_90964500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015927	chr10	-	189	1	Intergenic	novelGene_530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATAAGTCTATGGGGGAC	NA	False	NA	NA	False	NA	NA	NA	90969485	90969296	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_90969300_90969500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015933	chr10	+	187	1	Intergenic	novelGene_531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTATATTGGGAATGGCT	3725	False	NA	NA	False	NA	NA	NA	90973984	90974171	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_90974000_90974200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015935	chr10	-	200	1	Intergenic	novelGene_532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAACAAAGAGCTGGGCAC	NA	False	NA	NA	False	TTTAAA	-1	NA	90978421	90978221	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_90978200_90978400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015948	chr10	-	3418	8	FSM	ENSMUSG00000019961.18	ENSMUST00000092219.14	1854	8	-19	-1545	-5	0	multi-exon	FALSE	canonical	3	63	junction_4	263.470092792177	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTGTTGAATACATG	NA	False	NA	-2	True	AATAAA	-15	NA	91007449	90983432	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90994609_90994708_90999904_91000064_91001804_91001932_91006899
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015963	chr10	-	3818	4	FSM	ENSMUSG00000019961.18	ENSMUST00000020123.7	3772	4	-41	-5	-37	5	multi-exon	FALSE	canonical	3	173	junction_1	318.417266421838	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTGGTCTCCAGAAACA	NA	False	NA	-13	True	AATAAA	-21	NA	91007481	90996273	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_90999224_90999904_91000064_91001804_91001932_91006899
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015983	chr10	-	3528	15	FSM	ENSMUSG00000019988.8	ENSMUST00000020163.7	3534	15	7	-1	7	1	multi-exon	FALSE	canonical	3	126	junction_9	20.2858400398517	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTCTGAGCTTGAACCT	NA	False	NA	0	True	AATAAA	-20	NA	92558275	92520606	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_92522158_92522581_92522649_92525496_92525654_92526489_92526647_92527695_92527899_92528749_92528798_92530841_92530971_92534031_92534228_92534587_92534790_92536581_92536812_92547032_92547174_92549935_92550053_92552027_92552123_92555347_92555492_92558184
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000015993	chr10	+	178	1	Intergenic	novelGene_533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAACTACTCCTATG	NA	False	NA	NA	False	NA	NA	NA	92968311	92968489	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_92968300_92968500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016003	chr10	+	4376	16	ISM	ENSMUSG00000020015.11	ENSMUST00000069965.9	3615	17	-215	-2	-200	2	intron_retention	FALSE	canonical	3	223	junction_1	19.4712323413	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTGTGGAGTCACTG	NA	False	NA	17	True	TATAAA	-4	NA	92996536	93077192	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr10_+_92997063_93044033_93044181_93047772_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016005	chr10	+	3845	17	FSM	ENSMUSG00000020015.11	ENSMUST00000069965.9	3615	17	-215	-15	-200	15	multi-exon	FALSE	canonical	3	213	junction_16	22.6329405955126	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTGTTCTTTATTGGGG	NA	False	NA	30	True	TATAAA	-17	NA	92996536	93077205	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_92997063_93044033_93044181_93047772_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827_93074906_93075449
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016026	chr10	+	196	1	Intergenic	novelGene_534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACATCTGTCTTAGCTGG	7261	False	NA	NA	False	NA	NA	NA	93268759	93268955	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_93268800_93269000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016035	chr10	+	2054	19	FSM	ENSMUSG00000015889.9	ENSMUST00000016033.9	2029	19	-24	-1	-24	0	multi-exon	FALSE	canonical	3	348	junction_6	42.1416262935671	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGTGTCATTTTTGG	NA	False	NA	22	True	AATACA	-21	NA	93289248	93320737	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318111_93318195_93318823_93318929_93320524
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016046	chr10	+	1918	18	NIC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_16	100.405509988178	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGTGTCATTTTTGG	NA	False	NA	22	True	AATACA	-21	NA	93289301	93320737	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318823_93318929_93320524
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016049	chr10	-	493	4	FSM	ENSMUSG00000020018.7	ENSMUST00000020203.7	861	4	9	359	9	-359	multi-exon	FALSE	canonical	3	2132	junction_3	195.841772867792	425	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGACTATTTAATGCA	NA	False	NA	0	True	AATAAA	-29	NA	93425559	93419249	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_93419393_93419891_93419957_93423859_93423986_93425400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016067	chr10	-	4428	11	FSM	ENSMUSG00000036112.16	ENSMUST00000047910.15	4424	11	-4	0	-4	0	multi-exon	FALSE	canonical	3	2022	junction_3	150.158882521148	1369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGGAGTGAAAGACCAGT	NA	False	NA	-14	True	AATAAA	-23	NA	93725680	93694350	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016074	chr10	-	4407	11	NIC	ENSMUSG00000036112.16	novel	4424	11	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	309	junction_10	575.406508479006	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGGAGTGAAAGACCAGT	NA	False	NA	-14	True	AATAAA	-23	NA	93725662	93694350	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722961_93725399
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016090	chr10	+	3829	14	FSM	ENSMUSG00000005897.15	ENSMUST00000105290.9	3732	14	-92	-5	-92	5	multi-exon	FALSE	canonical	3	23	junction_4	6	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTATCCTGTCAATGT	NA	False	NA	NA	False	ATTAAA	-20	NA	93983792	94033078	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_93983965_93992768_93992842_93998111_93998307_93999590_93999670_94001279_94001460_94003271_94003420_94003499_94003591_94006910_94007096_94007839_94008000_94017355_94017478_94024010_94024151_94026480_94026619_94028696_94028803_94031038
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016098	chr10	+	562	4	FSM	ENSMUSG00000020022.18	ENSMUST00000179990.8	566	4	9	-5	9	5	multi-exon	FALSE	canonical	3	3293	junction_3	309.018877524767	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGTGCGTTCACACCG	NA	False	NA	18	True	ATTAAA	-18	NA	94034874	94056815	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_94034993_94035811_94035895_94039149_94039238_94056542
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016118	chr10	+	181	1	Intergenic	novelGene_535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGGAAGAGAGCTTATA	NA	False	NA	NA	False	NA	NA	NA	94513754	94513935	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_94513800_94513900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016130	chr10	+	3125	16	FSM	ENSMUSG00000020024.8	ENSMUST00000020212.6	3639	16	0	514	0	146	multi-exon	TRUE	canonical	0	0	junction_13	58.1305045183297	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTGTTTAATTTTCCT	9504	False	NA	9	True	AATAAA	-18	NA	94524515	94626201	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016137	chr10	-	188	1	Intergenic	novelGene_536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAAAAACTGTTCCCTGT	NA	False	NA	NA	False	NA	NA	NA	94813032	94812844	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_94812800_94813000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016143	chr10	+	261	1	Intergenic	novelGene_537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTCATGATGCATCATA	3184	False	NA	NA	False	AATAAA	-8	NA	95183519	95183780	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_95183500_95183800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016159	chr10	-	2210	3	FSM	ENSMUSG00000020027.19	ENSMUST00000020215.16	2222	3	-2	14	-2	-14	multi-exon	FALSE	canonical	3	447	junction_2	23.5	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTGCACTCATTACTTT	NA	False	NA	-12	True	AATAAA	-18	NA	95252721	95247365	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_95248973_95250692_95251054_95252479
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016169	chr10	-	1117	2	NNC	ENSMUSG00000112261.2	novel	660	3	NA	NA	7783	561	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTTCAGAAACCCTAAG	9336	False	NA	NA	False	AAGAAA	-10	NA	95289303	95280616	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_-_95281620_95289189
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016170	chr10	-	1085	2	NIC	ENSMUSG00000112261.2	novel	660	3	NA	NA	24	561	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTTCAGAAACCCTAAG	1577	False	NA	NA	False	AAGAAA	-10	NA	95297062	95280616	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_95281620_95296980
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016179	chr10	-	781	6	FSM	ENSMUSG00000062981.6	ENSMUST00000218893.2	661	6	-22	-98	-22	95	multi-exon	FALSE	canonical	3	2875	junction_5	503.887924046608	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCCTGGGGACTCTCTT	NA	False	NA	87	True	ATTAAA	-5	NA	95337824	95316571	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_95316840_95326107_95326275_95329492_95329578_95332685_95332750_95336244_95336385_95337767
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016186	chr10	-	3880	5	NIC	ENSMUSG00000062981.6	novel	661	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	2875	junction_4	535.975745719897	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTGTGTATTTCATTA	NA	False	NA	-8	True	AATAAA	-17	NA	95337800	95316666	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_95316840_95326107_95329578_95332685_95332750_95336244_95336385_95337767
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016188	chr10	-	658	6	NNC	ENSMUSG00000062981.6	novel	661	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_3	1477.20904410987	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTGTGTATTTCATTA	NA	False	NA	-8	True	AATAAA	-17	NA	95337800	95316666	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_-_95316840_95326107_95326275_95329492_95329574_95332685_95332750_95336244_95336385_95337767
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016191	chr10	-	1116	6	NNC	ENSMUSG00000062981.6	novel	661	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	132	junction_2	1514.28562695418	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTGTGTATTTCATTA	NA	False	NA	-8	True	AATAAA	-17	NA	95337800	95316666	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_-_95316840_95326107_95326729_95329492_95329578_95332685_95332750_95336244_95336385_95337767
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016227	chr10	-	3303	5	FSM	ENSMUSG00000020029.7	ENSMUST00000020217.7	3210	5	-89	-4	-89	4	multi-exon	FALSE	canonical	3	479	junction_2	92.7937902017156	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTATTTTTAGTTTAAGA	NA	False	NA	-17	True	AATAAA	-20	NA	95400097	95382864	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_95385353_95385637_95385723_95387310_95387356_95388347_95388459_95399523
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016234	chr10	-	3243	5	NNC	ENSMUSG00000020029.7	novel	3210	5	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	3	194	junction_2	214.72307747422	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTTTATTTTTAGTTT	NA	False	NA	-21	True	AATAAA	-16	NA	95400038	95382868	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_-_95385353_95385637_95385726_95387310_95387356_95388347_95388459_95399523
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016247	chr10	+	186	1	Intergenic	novelGene_538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCGTAGCATGCACAAGG	1323	False	NA	NA	False	NA	NA	NA	95731658	95731844	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_95731700_95731800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016256	chr10	+	198	1	Intergenic	novelGene_539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAAATGAAGCACTGGAA	NA	False	NA	NA	False	NA	NA	NA	96137305	96137503	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_96137300_96137500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016271	chr10	+	165	1	Intergenic	novelGene_540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTCGGAGTGAGCCAGGAC	NA	False	NA	NA	False	NA	NA	NA	98234604	98234769	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_98234600_98234800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016297	chr10	+	2908	12	FSM	ENSMUSG00000019952.16	ENSMUST00000020113.15	2862	12	40	-86	-6	0	multi-exon	FALSE	canonical	3	64	junction_11	10.2158522093674	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATGTCTTCTCTTTTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	98942937	99033936	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_98943086_98943653_98943739_98960692_98960865_98965344_98965525_98980096_98980205_98980340_98980457_98988662_98988797_98990930_98991000_98992063_98992214_99000730_99000812_99028643_99028860_99032487
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016310	chr10	+	181	1	Intergenic	novelGene_541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAATCCATTTGATT	3663	False	NA	NA	False	NA	NA	NA	99310277	99310458	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_99310300_99310500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016329	chr10	-	5993	14	FSM	ENSMUSG00000036676.15	ENSMUST00000058154.15	5993	14	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_8	14.4496677957759	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGATTGTCTTGTGATGT	NA	False	NA	1	True	ATTAAA	-23	NA	100323212	100279763	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_100283606_100284685_100284913_100286100_100286271_100287243_100287348_100292909_100293022_100294776_100294898_100296821_100296971_100301882_100302136_100307190_100307364_100307776_100307893_100310236_100310337_100312418_100312638_100313666_100313885_100323023
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016352	chr10	-	185	1	Intergenic	novelGene_542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGAAAACTAAGAAATTGG	NA	False	NA	NA	False	NA	NA	NA	102255466	102255281	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_102255300_102255500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016371	chr10	-	1977	12	FSM	ENSMUSG00000036009.17	ENSMUST00000046638.10	2033	12	-2	58	0	8	multi-exon	FALSE	canonical	3	65	junction_11	25.2121576340063	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGTGTTTTCATTCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	105677241	105599107	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_105599323_105601080_105601153_105601824_105601900_105615448_105615543_105629200_105629275_105630222_105630253_105633085_105633181_105659020_105659172_105661858_105662453_105665708_105665816_105668711_105668877_105676936
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016395	chr10	+	5188	1	FSM	ENSMUSG00000112523.2	ENSMUST00000220086.2	871	1	-2	-4315	-2	4315	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTTCTTGTGGGTGATT	NA	False	NA	NA	False	NA	NA	NA	106018879	106024067	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_106018900_106024100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016404	chr10	+	5870	25	FSM	ENSMUSG00000019907.11	ENSMUST00000219263.2	3355	25	-101	-2414	-101	-219	multi-exon	TRUE	canonical	3	168	junction_12	28.3996466625125	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTTTTTCCTTAGC	NA	False	NA	NA	False	CATAAA	-25	NA	107997952	108115626	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108103264_108103282_108104432_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016417	chr10	+	196	1	Intergenic	novelGene_543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGACATTTGCTGGTACTT	NA	False	NA	NA	False	NA	NA	NA	108031069	108031265	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_108031100_108031300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016427	chr10	-	177	1	Intergenic	novelGene_544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATATCTGGAAAGGAAGA	NA	False	NA	NA	False	NA	NA	NA	108140950	108140773	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_108140800_108141000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016440	chr10	-	212	1	Intergenic	novelGene_545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGATCCTTCTAACCTAT	NA	False	NA	NA	False	NA	NA	NA	108142621	108142409	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_108142400_108142600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016462	chr10	+	219	1	Intergenic	novelGene_546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTGTTTTCCATGATGT	NA	False	NA	NA	False	NA	NA	NA	108229449	108229668	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_108229400_108229700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016474	chr10	-	214	1	Intergenic	novelGene_547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCTGAGGGAAACGTTT	NA	False	NA	NA	False	NA	NA	NA	108248413	108248199	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_108248200_108248400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016481	chr10	-	186	1	Intergenic	novelGene_548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACAAAGCTGGACAGTAG	NA	False	NA	NA	False	NA	NA	NA	108317543	108317357	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_108317400_108317500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016512	chr10	+	188	1	Intergenic	novelGene_549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGCTTGAGACAGTAGC	NA	False	NA	NA	False	NA	NA	NA	111114849	111115037	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_111114800_111115000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016519	chr10	-	178	1	Intergenic	novelGene_550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAGAATAACTGTTC	NA	False	NA	NA	False	NA	NA	NA	111246579	111246401	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_111246400_111246600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016526	chr10	+	1559	16	FSM	ENSMUSG00000058799.17	ENSMUST00000065917.16	1486	16	-68	-5	-68	5	multi-exon	TRUE	canonical	3	684	junction_15	463.449884621364	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTCGGTTTGTACTG	NA	False	NA	28	True	AATAAA	-30	NA	111309015	111332750	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900_111331967_111332614
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016528	chr10	+	3469	15	FSM	ENSMUSG00000058799.17	ENSMUST00000217908.2	1350	15	-86	-2033	-67	2	multi-exon	FALSE	canonical	3	980	junction_10	363.653962004586	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGATATTTGAAGTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	111309016	111334013	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016565	chr10	+	198	1	Intergenic	novelGene_551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATAGCTCTGTGTTGAT	4286	False	NA	NA	False	NA	NA	NA	111489638	111489836	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_111489600_111489800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016583	chr10	-	3601	1	FSM	ENSMUSG00000074748.4	ENSMUST00000099276.4	3566	1	-33	-2	-27	2	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGACTCATCTTCTTAAT	NA	False	NA	NA	False	AATAAA	-15	NA	112764933	112761332	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_112761300_112764900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016599	chr10	+	192	1	Intergenic	novelGene_552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCTTTACGGTCTAAGCA	NA	False	NA	NA	False	NA	NA	NA	115013103	115013295	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_115013100_115013300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016608	chr10	-	3167	17	FSM	ENSMUSG00000020130.10	ENSMUST00000020339.10	3752	17	-1	586	-1	-586	multi-exon	FALSE	canonical	3	391	junction_16	42.5718143259129	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGTTTTCAGTTACA	NA	False	NA	-1	True	ATTAAA	-15	NA	115087373	115034362	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016637	chr10	-	2986	7	FSM	ENSMUSG00000069520.7	ENSMUST00000092170.7	3012	7	29	-3	-7	3	multi-exon	FALSE	canonical	3	182	junction_6	17.9017379665278	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTTTTGTTTTTATTT	NA	False	NA	-1	True	TATAAA	-22	NA	115198143	115176643	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115197956
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016651	chr10	+	6962	35	FSM	ENSMUSG00000034163.11	ENSMUST00000036044.9	6957	35	0	-5	0	5	multi-exon	FALSE	canonical	3	77	junction_22	26.4839345439331	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGGACTGTTTTGTGTT	NA	False	NA	14	True	AATAAA	-26	NA	115220863	115268682	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_115221713_115226554_115226972_115233909_115233975_115236619_115236819_115237513_115237738_115239104_115239226_115240104_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115246433_115246609_115247103_115247236_115247624_115248168_115248261_115248372_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115266660_115267307_115267348_115267607_115267671_115267800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016654	chr10	+	2765	5	ISM	ENSMUSG00000034163.11	ENSMUST00000036044.9	6957	35	3952	29452	3952	-27554	internal_fragment	FALSE	canonical	3	148	junction_2	23.4840371316348	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGGAGCCAAAACTTTGAA	NA	False	NA	NA	False	NA	NA	NA	115224815	115239225	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr10_+_115226972_115233909_115233975_115236619_115236819_115237513_115237738_115239104
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016660	chr10	+	175	1	Intergenic	novelGene_553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGTTACATTGTACAAC	NA	False	NA	NA	False	NA	NA	NA	115801624	115801799	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_115801600_115801800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016664	chr10	-	207	1	Intergenic	novelGene_554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGTGGGTGAAGCTAAC	NA	False	NA	NA	False	NA	NA	NA	115817671	115817464	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_115817500_115817700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016670	chr10	-	2806	16	FSM	ENSMUSG00000020166.16	ENSMUST00000105267.8	2800	16	0	-6	0	1	multi-exon	FALSE	canonical	3	333	junction_15	67.9643697503005	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGGCTTTGATTTGAAA	NA	False	NA	0	True	AATAAA	-24	NA	116417405	116321064	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385081_116417357
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016687	chr10	-	2859	17	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_15	145.637593339598	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417405	116321069	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116373125_116373184_116384937_116385081_116417357
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016690	chr10	-	2731	16	FSM	ENSMUSG00000020166.16	ENSMUST00000169921.8	2120	16	11	-622	0	0	multi-exon	FALSE	canonical	3	93	junction_15	117.305110242005	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417405	116321069	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385011_116417357
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016691	chr10	-	2788	17	NIC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	93	junction_16	168.781466973569	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417404	116321069	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116373125_116373184_116384937_116385011_116417357
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016692	chr10	-	2390	13	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_9	144.203246804255	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417405	116321069	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116353221_116353289_116363731_116363855_116384937_116385081_116417357
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016728	chr10	-	2831	11	FSM	ENSMUSG00000064181.7	ENSMUST00000219109.2	1844	11	10	-997	10	4	multi-exon	TRUE	canonical	3	251	junction_7	35.031985384788	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTGGGTTATTTTCTGT	NA	False	NA	-1	True	ATTAAA	-20	NA	116786326	116741684	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116773301_116773561_116775105_116775387_116786164
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016749	chr10	-	182	1	Intergenic	novelGene_555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAATCATATTGAAA	NA	False	NA	NA	False	NA	NA	NA	116866087	116865905	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_116865900_116866100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016758	chr10	-	2081	16	NIC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	-11	4	combination_of_known_junctions	FALSE	canonical	3	239	junction_15	561.749291647677	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTACTGATCTGTATAT	NA	False	NA	-7	True	AATAAA	-23	NA	116899291	116886901	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899064
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016775	chr10	+	172	1	Intergenic	novelGene_556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGAGCGAGCAGGGCT	NA	False	NA	NA	False	NA	NA	NA	116895245	116895417	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_116895200_116895400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016792	chr10	-	186	1	Intergenic	novelGene_557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAAGTGGCAAGA	9545	False	NA	NA	False	NA	NA	NA	116922314	116922128	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_116922100_116922300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016799	chr10	+	198	1	Intergenic	novelGene_558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGAAAGAAATGCATTC	2508	False	NA	NA	False	NA	NA	NA	116968873	116969071	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_116968900_116969100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016806	chr10	-	1395	7	FSM	ENSMUSG00000020171.9	ENSMUST00000020382.8	1327	7	13	-81	-4	80	multi-exon	FALSE	canonical	3	274	junction_4	39.2074256005444	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGTGCTTTGATCATA	3384	False	NA	-1	True	AATAAA	-22	NA	117060399	117051045	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_117051742_117053116_117053205_117053333_117053427_117056237_117056333_117056436_117056504_117058078_117058199_117060163
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016815	chr10	-	6534	10	FSM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	-2	-6	1	6	multi-exon	FALSE	canonical	3	507	junction_5	44.0656076524286	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCAGTTTGTTCTTTTT	4472	False	NA	-6	True	AATAAA	-19	NA	117212877	117180571	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016842	chr10	+	200	1	Intergenic	novelGene_559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATTTTAGTATTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	117436411	117436611	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_117436400_117436600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016850	chr10	-	3102	12	FSM	ENSMUSG00000020184.16	ENSMUST00000020408.16	3099	12	-16	13	-16	7	multi-exon	FALSE	canonical	3	316	junction_11	63.7658423031336	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTTACACATTTTTTT	NA	False	NA	-12	True	AATAAA	-28	NA	117546679	117524792	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850_117545934_117546456
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016861	chr10	-	3144	11	ISM	ENSMUSG00000020184.16	ENSMUST00000020408.16	3099	12	463	15	-3	5	3prime_fragment	FALSE	canonical	3	473	junction_6	30.8506077735918	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCTTACACATTTTT	NA	False	NA	-14	True	AATAAA	-26	NA	117546200	117524794	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016890	chr10	-	3538	5	FSM	ENSMUSG00000060181.7	ENSMUST00000079041.7	3489	5	-48	-1	-48	1	multi-exon	FALSE	canonical	3	51	junction_4	6.41774882649672	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGGCTGATAAGCAGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	117582318	117569582	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_117572139_117576416_117576500_117576657_117576817_117580789_117580901_117581689
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016911	chr10	-	181	1	Intergenic	novelGene_560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTTTAAAAAAAATAGAATT	NA	False	NA	NA	False	NA	NA	NA	117599609	117599428	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_117599400_117599600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016913	chr10	+	201	1	Intergenic	novelGene_561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCCTGTCTATTGCACCA	NA	False	NA	NA	False	NA	NA	NA	117607946	117608147	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_117607900_117608100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016930	chr10	+	222	1	Intergenic	novelGene_562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	370	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATTTCACTCGCAAATGA	NA	False	NA	NA	False	NA	NA	NA	117686759	117686981	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_117686800_117687000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016938	chr10	+	3105	14	FSM	ENSMUSG00000020212.15	ENSMUST00000020437.13	3074	14	-29	-2	-8	2	multi-exon	FALSE	canonical	3	66	junction_4	15.3152281412244	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGATGCTTCTGTTTTCCT	NA	False	NA	13	True	ATTAAA	-16	NA	117977707	118004904	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_117977868_117978754_117978870_117982499_117982877_117983885_117984021_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016958	chr10	+	188	1	Intergenic	novelGene_563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCACAGCTGTGCTACAT	NA	False	NA	NA	False	NA	NA	NA	118959143	118959331	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_118959100_118959300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016974	chr10	+	197	1	Intergenic	novelGene_564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCATATTTTGTAAATTG	NA	False	NA	NA	False	NA	NA	NA	119143776	119143973	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_119143800_119144000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000016991	chr10	-	179	1	Intergenic	novelGene_565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTTCTTTTTGAGACA	NA	False	NA	NA	False	NA	NA	NA	119962283	119962104	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_119962100_119962300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017002	chr10	+	178	1	Intergenic	novelGene_566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAACCTCAAACTTA	7516	False	NA	NA	False	NA	NA	NA	120000483	120000661	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_120000500_120000700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017021	chr10	+	1168	3	FSM	ENSMUSG00000020224.16	ENSMUST00000020444.16	1664	3	-15	511	-15	0	multi-exon	FALSE	canonical	3	990	junction_2	137	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGGAGTTTGACATTT	NA	False	NA	8	True	AATAAA	-17	NA	120062959	120067976	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_120063029_120063878_120064109_120067107
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017031	chr10	-	179	1	Intergenic	novelGene_567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAGAGAGAGACAGAGA	NA	False	NA	NA	False	NA	NA	NA	120113673	120113494	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_120113500_120113700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017041	chr10	+	192	1	Intergenic	novelGene_568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATATTTTCTTAAGCTGG	NA	False	NA	NA	False	NA	NA	NA	120286278	120286470	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_120286300_120286500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017044	chr10	-	197	1	Intergenic	novelGene_569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTAAAATTGTCCGTTTCC	NA	False	NA	NA	False	TTTAAA	-3	NA	120345697	120345500	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_120345500_120345700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017057	chr10	+	198	1	Intergenic	novelGene_570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	768	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGGACATTAATCTAGC	NA	False	NA	NA	False	AAGAAA	-1	NA	120658242	120658440	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_120658200_120658400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017071	chr10	+	183	1	Intergenic	novelGene_571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTGTTCACACATAGAAAG	NA	False	NA	NA	False	NA	NA	NA	120804068	120804251	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_120804100_120804300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017082	chr10	-	184	1	Intergenic	novelGene_572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACATATTATTATTTTTAC	NA	False	NA	NA	False	NA	NA	NA	121170520	121170336	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_121170300_121170500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017088	chr10	+	187	1	Intergenic	novelGene_573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTCATATGCTCGGAACA	NA	False	NA	NA	False	NA	NA	NA	121192877	121193064	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_121192900_121193100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017091	chr10	+	3868	14	FSM	ENSMUSG00000034707.8	ENSMUST00000040344.7	3855	14	-5	-8	-5	4	multi-exon	FALSE	canonical	3	144	junction_4	13.2731878157773	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCTTTGTTTTTAGTC	NA	False	NA	12	True	ATTAAA	-24	NA	121200989	121233158	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_121201264_121207048_121207109_121210262_121210470_121212112_121212179_121212540_121212640_121213926_121214095_121216022_121216106_121217077_121217197_121219244_121219349_121224005_121224108_121226528_121226637_121227275_121227387_121228585_121228747_121230952
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017105	chr10	-	3512	5	FSM	ENSMUSG00000025795.9	ENSMUST00000026902.9	3522	5	10	0	10	0	multi-exon	FALSE	canonical	3	44	junction_2	3.60555127546399	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATGTCTTTATTTATG	NA	False	NA	NA	False	ATTAAA	-24	NA	121312242	121246254	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_121248991_121250262_121250373_121251970_121252194_121252989_121253098_121311907
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017123	chr10	-	3004	21	FSM	ENSMUSG00000020115.4	ENSMUST00000020316.4	3024	21	20	0	10	0	multi-exon	FALSE	canonical	3	107	junction_12	17.7	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGTGTGCTTTTGTACC	3898	False	NA	0	True	AATAAA	-22	NA	121422672	121382359	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389930_121391891_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412178_121412309_121414484_121414626_121420100_121420247_121422599
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017156	chr10	-	5976	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2498	0	intron_retention	FALSE	canonical	3	239	junction_24	221.439792262417	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	9353	False	NA	-8	True	AATAAA	-16	NA	121464735	121423284	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017170	chr10	-	5839	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2483	-2	at_least_one_novel_splicesite	FALSE	canonical	3	151	junction_17	303.884172671102	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCATTGGAGTGGGCCTT	9368	False	NA	-10	True	AATAAA	-14	NA	121464720	121423286	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017183	chr10	-	3886	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-152	-1	intron_retention	FALSE	canonical	0	0	junction_24	350.644248332821	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTTTTCCGGAGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	121462389	121425524	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451123_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017207	chr10	+	3139	3	FSM	ENSMUSG00000053684.9	ENSMUST00000065600.8	3123	3	-14	-2	-14	2	multi-exon	FALSE	canonical	3	147	junction_1	1	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTATATATGGTTTTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	121575827	121588772	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_121576116_121581235_121581522_121586207
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017213	chr10	+	2951	3	FSM	ENSMUSG00000053684.9	ENSMUST00000136432.2	2968	3	4	13	4	0	multi-exon	FALSE	canonical	3	27	junction_1	61	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTATATATGGTTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	121575846	121588770	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_121576116_121581402_121581522_121586207
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017233	chr10	-	1453	6	FSM	ENSMUSG00000034620.18	ENSMUST00000140299.3	4793	6	201	3139	-14	7	multi-exon	FALSE	canonical	3	258	junction_5	21.4513402844671	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCATAAGTGTAAATAGTTA	NA	False	NA	-3	True	AATAAA	-26	NA	121933075	121917157	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_121917595_121924783_121924955_121926364_121926680_121930494_121930598_121931843_121932000_121932804
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017246	chr10	-	6152	34	FSM	ENSMUSG00000034602.16	ENSMUST00000037557.9	5511	34	-355	-286	3	96	multi-exon	FALSE	canonical	3	100	junction_22	19.412065393159	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGATTTGCCTTCTTGT	NA	False	NA	-1	True	AATACA	-23	NA	122912285	122830967	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867027_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017256	chr10	-	6060	34	FSM	ENSMUSG00000034602.16	ENSMUST00000170935.9	5302	34	-354	-404	4	2	multi-exon	FALSE	canonical	3	39	junction_22	24.7608209734668	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTGCATTTATTTAAAAT	NA	False	NA	-95	True	AATAAA	-21	NA	122912284	122831061	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867030_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017263	chr10	-	4775	22	FSM	ENSMUSG00000020124.11	ENSMUST00000220377.2	11525	22	21	6729	-8	1	multi-exon	TRUE	canonical	3	236	junction_15	99.6636747895759	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTCTTTTATTTCTTAC	NA	False	NA	0	True	AATAAA	-17	NA	123032879	122947639	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122988945_122989033_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017267	chr10	-	4688	21	FSM	ENSMUSG00000020124.11	ENSMUST00000020334.9	4666	21	-21	-1	-8	1	multi-exon	FALSE	canonical	3	255	junction_15	80.7788802843912	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTCTTTTATTTCTTAC	NA	False	NA	0	True	AATAAA	-17	NA	123032879	122947639	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017312	chr10	-	1048	6	FSM	ENSMUSG00000025436.13	ENSMUST00000168520.3	1043	6	-4	-1	-2	1	multi-exon	FALSE	canonical	3	157	junction_1	12.3515181253156	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTATTTTTTGGCTCTTT	NA	False	NA	1	True	AATAAA	-26	NA	126737221	126723116	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_126723564_126727508_126727593_126730093_126730232_126734755_126734838_126735449_126735496_126736970
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017319	chr10	+	192	1	Intergenic	novelGene_574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAGAAGAGTAAAAGGTT	NA	False	NA	NA	False	NA	NA	NA	126758913	126759105	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_126758900_126759100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017329	chr10	+	4490	9	NNC	ENSMUSG00000078429.10	novel	4817	8	NA	NA	-129	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	131.579764306674	55	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGACTGGGAGCTGCTTT	NA	False	NA	14	True	AATAAA	-20	NA	126814768	126835839	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_+_126815171_126827399_126827546_126828467_126828507_126828876_126828979_126829720_126829778_126831723_126831817_126831894_126832081_126832229_126835202_126835346
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017357	chr10	-	1203	6	FSM	ENSMUSG00000040521.12	ENSMUST00000040560.11	1206	6	2	1	2	-1	multi-exon	FALSE	canonical	3	855	junction_5	79.6728310027954	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAATGTGTGAGTGTGTG	NA	False	NA	-4	True	AATAAA	-23	NA	126866707	126858201	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_126858796_126860804_126860893_126864233_126864357_126865422_126865552_126866331_126866506_126866612
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017399	chr10	+	1425	9	NNC	ENSMUSG00000006728.13	novel	2053	8	NA	NA	1	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	2329.35467189949	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCTTTATTTTTCTTT	NA	False	NA	18	True	AAAACA	-16	NA	126899473	126903155	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902456_126902534_126902797
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017421	chr10	-	1598	6	FSM	ENSMUSG00000006736.10	ENSMUST00000060991.6	1556	6	-43	1	-43	-1	multi-exon	FALSE	canonical	3	545	junction_1	41.1698919114442	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGTCTTGTTTTCCTGT	NA	False	NA	-1	True	AATAAA	-14	NA	126906176	126903149	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_126904060_126904137_126904252_126904348_126904481_126904776_126904858_126905214_126905383_126905983
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017430	chr10	+	228	1	Intergenic	novelGene_575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTCAAGTAGAGGGAATGA	NA	False	NA	NA	False	ATTAAA	-7	NA	126909054	126909282	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_126909100_126909300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017437	chr10	-	2641	15	FSM	ENSMUSG00000040462.14	ENSMUST00000164259.9	2627	15	-12	-2	-12	0	multi-exon	FALSE	canonical	3	78	junction_3	48.7011398265807	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCAGGCTCTGTGGGGA	NA	False	NA	-2	True	AATAAA	-16	NA	126957012	126931518	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_126932242_126932498_126932612_126932783_126932949_126933800_126933991_126934209_126934507_126934699_126934786_126935271_126935327_126935481_126935577_126935758_126935861_126935953_126936165_126954967_126955067_126955271_126955349_126955472_126955537_126956237_126956415_126956825
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017462	chr10	-	996	4	NIC	ENSMUSG00000040415.16	novel	1944	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	54.0760780957922	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACACCCGTCTTCTGTT	NA	False	NA	0	True	AATAAA	-25	NA	127031597	127026246	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_127026909_127029598_127029673_127030278_127030504_127031562
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017468	chr10	-	2263	5	FSM	ENSMUSG00000040415.16	ENSMUST00000116229.2	1994	5	-5	-264	-4	0	multi-exon	FALSE	canonical	3	65	junction_4	30.8332207205151	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACACCCGTCTTCTGTT	NA	False	NA	0	True	AATAAA	-25	NA	127031601	127026246	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_127027423_127028477_127029227_127029598_127029673_127030278_127030504_127031562
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017480	chr10	-	3375	10	FSM	ENSMUSG00000025417.9	ENSMUST00000013970.9	3307	10	-64	-4	-34	4	multi-exon	FALSE	canonical	3	316	junction_3	43.7148447820759	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGTTTTTGTTTTTTAA	NA	False	NA	0	True	AATAAA	-27	NA	127047488	127032931	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738_127044837_127047206
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017486	chr10	-	3413	10	NNC	ENSMUSG00000025417.9	novel	3307	10	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	118.633682473756	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGAAGTTTTTGTTTT	NA	False	NA	-4	True	AATAAA	-23	NA	127047466	127032935	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_-_127035014_127035117_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738_127044837_127047206
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017505	chr10	+	1894	14	FSM	ENSMUSG00000025410.11	ENSMUST00000026479.11	1784	14	-106	-4	-87	4	multi-exon	FALSE	canonical	3	604	junction_8	36.9826442582377	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAGTTTCAAAATATTCT	9110	False	NA	20	True	AATAAA	-22	NA	127102149	127117823	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017540	chr10	-	207	1	ISM	ENSMUSG00000040354.15	ENSMUST00000037290.12	2939	21	15359	0	1248	0	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTCCTGGTCTACCCT	4353	False	NA	-6	True	AATAAA	-27	NA	127132296	127132089	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr10_-_127132100_127132300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017548	chr10	-	2945	21	FSM	ENSMUSG00000040354.15	ENSMUST00000037290.12	2939	21	-6	0	-6	0	multi-exon	FALSE	canonical	3	1393	junction_15	206.401332360041	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTCCTGGTCTACCCT	NA	False	NA	-6	True	AATAAA	-27	NA	127147661	127132089	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017567	chr10	-	200	1	Intergenic	novelGene_576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTCGAGACAGGGT	NA	False	NA	1	True	NA	NA	NA	127150995	127150795	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_127150800_127151000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017588	chr10	-	188	1	Intergenic	novelGene_577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTAATAAACTAAATGAGC	NA	False	NA	NA	False	NA	NA	NA	127201234	127201046	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_127201000_127201200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017615	chr10	+	194	1	Intergenic	novelGene_578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGAGGGCCGGGCAGTG	NA	False	NA	NA	False	NA	NA	NA	127315467	127315661	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_127315500_127315700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017624	chr10	+	933	4	FSM	ENSMUSG00000040280.11	ENSMUST00000035735.11	934	4	1	0	1	0	multi-exon	FALSE	canonical	3	101	junction_1	3.29983164553722	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGCGCCTGCTAATCA	NA	False	NA	NA	False	AATACA	-21	NA	127350836	127353023	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_127350908_127351267_127351357_127352133_127352195_127352311
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017630	chr10	-	2306	12	FSM	ENSMUSG00000025403.6	ENSMUST00000026470.6	2289	12	0	-17	0	1	multi-exon	FALSE	canonical	3	1501	junction_11	177.272820512796	232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCTTCTGTTTGATCC	NA	False	NA	-4	True	AATGAA	-16	NA	127358313	127352990	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017658	chr10	+	193	1	Intergenic	novelGene_579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAGACTTCCTGCTGTGC	NA	False	NA	NA	False	NA	NA	NA	127465549	127465742	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_127465500_127465700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017701	chr10	+	5844	9	NNC	ENSMUSG00000040195.12	novel	6002	9	NA	NA	12	0	at_least_one_novel_splicesite	TRUE	canonical	3	30	junction_3	43.8461443572864	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAGTCTTTTTAAATTAA	NA	False	NA	16	True	AATAAA	-16	NA	127512946	127536918	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_+_127513097_127524101_127524218_127525093_127525168_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531237_127531412_127532096
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017712	chr10	+	184	1	Intergenic	novelGene_580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTCCCATGAATAGTAT	1729	False	NA	NA	False	NA	NA	NA	127517512	127517696	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_127517500_127517700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017727	chr10	+	186	1	Intergenic	novelGene_581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGGTTCACAAGTGTGC	NA	False	NA	NA	False	NA	NA	NA	127817188	127817374	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_127817200_127817400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017733	chr10	+	196	1	Intergenic	novelGene_582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAGGTGGAGAGTGATAG	NA	False	NA	NA	False	NA	NA	NA	127829150	127829346	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_127829200_127829300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017743	chr10	+	202	1	Intergenic	novelGene_583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAGTCGATAAAAAAAAAA	3426	False	NA	NA	False	NA	NA	NA	127853482	127853684	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_127853500_127853700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017761	chr10	+	884	8	NNC	ENSMUSG00000061315.15	novel	885	8	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	4018.5497688716	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCAGGTGCTAGATCTT	4982	False	NA	0	True	AATAAA	-24	NA	127871513	127884502	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_+_127871553_127872288_127872430_127882036_127882123_127882597_127882676_127883526_127883674_127883867_127883997_127884113_127884237_127884361
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017765	chr10	+	2047	8	FSM	ENSMUSG00000071072.13	ENSMUST00000052798.14	2000	8	-47	0	-47	0	multi-exon	FALSE	canonical	3	2953	junction_7	394.34461257812	2710	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCAGTGTCACCTTGTTT	799	False	NA	39	True	AATAAA	-40	NA	127894775	127913141	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910154_127911206_127911232_127911935
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017783	chr10	+	1934	10	FSM	ENSMUSG00000025393.13	ENSMUST00000026459.6	1916	10	-13	-5	-13	5	multi-exon	FALSE	canonical	3	8904	junction_3	854.417771581948	4611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCTTGTGTTTCATAAT	NA	False	NA	16	True	ATTAAA	-27	NA	127919128	127926265	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017804	chr10	+	160	1	ISM	ENSMUSG00000025393.13	ENSMUST00000026459.6	1916	10	6841	118	1073	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTCTGTTTATGTTGC	NA	False	NA	22	True	AATAAA	-15	NA	127925982	127926142	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr10_+_127926000_127926100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017813	chr10	+	8412	29	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	488	0	at_least_one_novel_splicesite	FALSE	canonical	3	115	junction_4	94.4797988882236	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGATTGCATGTTTCTC	NA	False	NA	0	True	AATAAA	-20	NA	127932736	127965172	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949328_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017816	chr10	+	8414	29	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	488	5	at_least_one_novel_splicesite	FALSE	canonical	3	275	junction_3	79.9461553490976	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGCATGTTTCTCTCCTG	NA	False	NA	5	True	AATAAA	-25	NA	127932736	127965177	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017846	chr10	-	5279	13	FSM	ENSMUSG00000040043.18	ENSMUST00000092033.4	1481	13	-161	-3637	-161	2088	multi-exon	FALSE	canonical	3	274	junction_9	21.4048281157936	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTAGTGTCATCCATGGT	NA	False	NA	-2	True	AATAAA	-15	NA	128012509	127965338	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017858	chr10	-	220	1	Intergenic	novelGene_584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCCAATGTACTTTTTG	5874	False	NA	NA	False	NA	NA	NA	128001734	128001514	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_128001500_128001700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017859	chr10	+	257	1	Intergenic	novelGene_585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGAGCACTTACAGGGG	NA	False	NA	NA	False	ATTAAA	-9	NA	128004848	128005105	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_128004800_128005100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017868	chr10	+	2428	18	FSM	ENSMUSG00000044005.14	ENSMUST00000044776.13	2573	18	151	-6	-29	3	multi-exon	FALSE	canonical	3	75	junction_3	13.3766309680488	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTTTATATTTTGCT	NA	False	NA	16	True	AATAAA	-22	NA	128030476	128045814	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_128030777_128035050_128035151_128035505_128035628_128036041_128036172_128036754_128036835_128037074_128037239_128037427_128037487_128039691_128039725_128039943_128040003_128040529_128040597_128040729_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017876	chr10	-	1599	2	FSM	ENSMUSG00000051346.10	ENSMUST00000061995.10	1583	2	-16	0	-16	0	multi-exon	FALSE	canonical	3	299	junction_1	0	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCTGTCTATAAAATTGC	NA	False	NA	0	True	AATAAA	-41	NA	128047692	128045776	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_128047261_128047577
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017886	chr10	+	171	1	Intergenic	novelGene_586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTTAAAATTTTTTTTA	6753	False	NA	NA	False	NA	NA	NA	128050201	128050372	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_128050200_128050400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017907	chr10	+	4441	29	FSM	ENSMUSG00000039994.16	ENSMUST00000105244.8	4341	29	-11	-89	-2	0	multi-exon	FALSE	canonical	3	180	junction_28	54.1443059549842	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTTGTTGTCTTCCTCC	6604	False	NA	20	True	AATAAA	-20	NA	128067946	128088810	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088063
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017920	chr10	+	4434	29	NIC	ENSMUSG00000039994.16	novel	4385	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_23	70.0407315897875	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTTTTGTTGTCTTCCT	6606	False	NA	18	True	AATAAA	-18	NA	128067948	128088808	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086156_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088063
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017936	chr10	-	185	1	Antisense	novelGene_ENSMUSG00000039994.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACACTGCAGCTTTAACA	4117	False	NA	NA	False	NA	NA	NA	128078857	128078672	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr10_-_128078700_128078900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017958	chr10	-	202	1	Intergenic	novelGene_587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGCCACAAAGCAGGCAG	NA	False	NA	NA	False	NA	NA	NA	128109134	128108932	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_128108900_128109100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017965	chr10	+	205	1	Intergenic	novelGene_588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGGATACAAATCCCTT	356	False	NA	NA	False	NA	NA	NA	128111180	128111385	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_128111200_128111400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017980	chr10	+	4419	26	NNC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_12	55.6509694434877	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139205	128157222	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150048_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017985	chr10	+	4441	26	FSM	ENSMUSG00000005682.10	ENSMUST00000005825.8	4445	26	4	0	4	0	multi-exon	FALSE	canonical	2	78	junction_17	49.8603810655314	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139207	128157222	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017990	chr10	+	4412	26	FSM	ENSMUSG00000005682.10	ENSMUST00000218315.2	4379	26	-33	0	6	0	multi-exon	FALSE	canonical	2	164	junction_12	40.3480061465248	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139209	128157222	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000017996	chr10	+	3462	2	FSM	ENSMUSG00000005682.10	ENSMUST00000219801.2	3410	2	-30	-22	11	2	multi-exon	FALSE	canonical	3	271	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCACCCAAAAACTTGGCCA	NA	False	NA	NA	False	NA	NA	NA	128139214	128143299	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_128139341_128139963
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018025	chr10	+	963	6	FSM	ENSMUSG00000025381.4	ENSMUST00000219037.2	1383	6	55	365	0	1	multi-exon	FALSE	canonical	3	1395	junction_2	667.271938567778	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTGTTGTCTTTTTTT	NA	False	NA	34	True	AATGAA	-30	NA	128158382	128163057	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_128158645_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018029	chr10	+	246	1	Intergenic	novelGene_589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	128168221	128168467	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_128168200_128168500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018044	chr10	+	2935	11	FSM	ENSMUSG00000005683.9	ENSMUST00000005826.9	2926	11	-7	-2	-7	2	multi-exon	TRUE	canonical	3	1246	junction_9	132.722869167299	344	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTTGCTCTTACGTAAG	NA	False	NA	20	True	AATAAA	-20	NA	128173595	128198350	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_128173829_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128194403_128195038_128195169_128195302_128195405_128195812_128196023_128196836
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018055	chr10	-	1451	5	FSM	ENSMUSG00000039914.7	ENSMUST00000220227.2	1434	5	-13	-4	-13	4	multi-exon	FALSE	canonical	3	69	junction_4	16.3248277173145	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCATTTTTTGAGGGGG	6926	False	NA	1	True	AATAAA	-16	NA	128204879	128198964	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_128199661_128200273_128200376_128200891_128201085_128203875_128204023_128204566
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018089	chr10	+	4585	28	FSM	ENSMUSG00000025369.16	ENSMUST00000026433.9	4533	28	-50	-2	-4	2	multi-exon	FALSE	canonical	3	73	junction_11	16.862633913377	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGGTGCCTCTGTGT	2617	False	NA	48	True	TATAAA	-21	NA	128295112	128326043	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018110	chr10	-	3886	31	FSM	ENSMUSG00000025366.9	ENSMUST00000026427.8	3981	31	-183	278	-182	13	multi-exon	FALSE	canonical	3	144	junction_22	28.253790306199	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATGAACTTGCATGCCA	8136	False	NA	0	True	AATAAA	-20	NA	128361922	128346111	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018121	chr10	+	184	1	Antisense	novelGene_ENSMUSG00000025366.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCTATTATGAGCCTCTC	NA	False	NA	NA	False	NA	NA	NA	128350305	128350489	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr10_+_128350300_128350500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018124	chr10	-	199	1	Intergenic	novelGene_590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTAGCCCGTCATATCATG	NA	False	NA	NA	False	NA	NA	NA	128371652	128371453	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_128371500_128371700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018137	chr10	+	192	1	Intergenic	novelGene_591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAGAGCAATGGTGT	NA	False	NA	NA	False	NA	NA	NA	128372776	128372968	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_128372800_128373000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018141	chr10	+	181	1	Intergenic	novelGene_592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAAGATGCCTGCTTATA	145	False	NA	NA	False	NA	NA	NA	128376635	128376816	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_128376600_128376800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018145	chr10	-	2112	3	FSM	ENSMUSG00000039810.12	ENSMUST00000040572.10	3721	3	11	1598	11	1237	multi-exon	FALSE	canonical	3	75	junction_2	17	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATTTCTTTGATGGCTG	NA	False	NA	-6	True	AATAAA	-25	NA	128383632	128379429	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_128381408_128382696_128382761_128383562
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018148	chr10	-	92	1	ISM	ENSMUSG00000039810.12	ENSMUST00000040572.10	3721	3	4120	1600	3985	1235	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAAATTTCTTTGATGGC	NA	False	NA	-8	True	AATAAA	-23	NA	128379523	128379431	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr10_-_128379400_128379500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018171	chr10	-	391	4	FSM	ENSMUSG00000093674.8	ENSMUST00000176683.8	437	4	46	0	-4	0	multi-exon	FALSE	canonical	3	590	junction_3	9065.73447413697	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTACGTGTTTTTTT	NA	False	NA	-18	True	AATAAA	-29	NA	128384985	128383982	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_128384299_128384526_128384550_128384817_128384841_128384956
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018172	chr10	-	659	3	FSM	ENSMUSG00000093674.8	ENSMUST00000177513.2	680	3	24	-3	-2	0	multi-exon	FALSE	canonical	3	7075	junction_2	7636	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTACGTGTTTTTTT	NA	False	NA	-18	True	AATAAA	-29	NA	128384983	128383982	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_128384299_128384526_128384843_128384956
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018174	chr10	-	507	3	FSM	ENSMUSG00000093674.8	ENSMUST00000177163.8	544	3	37	0	-4	0	multi-exon	FALSE	canonical	3	15318	junction_2	3514.5	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTACGTGTTTTTTT	NA	False	NA	-18	True	AATAAA	-29	NA	128384985	128383982	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_128384299_128384526_128384550_128384817
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018198	chr10	-	1002	1	NIC	ENSMUSG00000093674.8	novel	544	3	NA	NA	-3	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTACGTGTTTTTTT	NA	False	NA	-18	True	AATAAA	-29	NA	128384984	128383982	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_-_128384000_128385000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018206	chr10	+	206	1	Intergenic	novelGene_593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTCAGCTAGTGTCTCA	465	False	NA	NA	False	NA	NA	NA	128391730	128391936	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_128391700_128391900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018211	chr10	-	2751	12	FSM	ENSMUSG00000025364.14	ENSMUST00000131728.4	2483	12	-263	-5	-263	3	multi-exon	FALSE	canonical	3	1853	junction_11	115.182428067554	857	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTGTTCTCTTTGTGG	8429	False	NA	-2	True	AATAAA	-17	NA	128402119	128393631	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018230	chr10	+	185	1	Intergenic	novelGene_594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAGACATATGGGGGAA	3788	False	NA	NA	False	NA	NA	NA	128442943	128443128	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_128442900_128443100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018243	chr10	-	447	4	FSM	ENSMUSG00000025362.7	ENSMUST00000026420.7	681	4	242	-8	19	5	multi-exon	FALSE	canonical	3	11844	junction_3	3964.03030036631	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGAGTGTGTTTATGTCGA	NA	False	NA	-4	True	NA	NA	NA	128462374	128460397	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_128460506_128461075_128461207_128461931_128462110_128462344
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018255	chr10	+	191	1	Intergenic	novelGene_595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGCCTAAGACACCCCTA	1855	False	NA	NA	False	NA	NA	NA	128490956	128491147	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_128491000_128491100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018267	chr10	-	3225	6	FSM	ENSMUSG00000000711.4	ENSMUST00000000727.4	3180	6	-35	-10	-35	10	multi-exon	FALSE	canonical	3	160	junction_5	17.0528589978338	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTGTTTTGTTTGTCTGC	NA	False	NA	NA	False	AGTAAA	-26	NA	128532168	128513033	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_128515515_128517254_128517349_128518692_128518816_128519063_128519216_128522616_128522878_128532054
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018287	chr10	-	2458	8	FSM	ENSMUSG00000025358.17	ENSMUST00000026416.15	2406	8	-39	-13	-38	8	multi-exon	FALSE	canonical	3	682	junction_2	218.467295455575	266	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTTCATATTTATCCTT	8209	False	NA	-8	True	ATTAAA	-28	NA	128540938	128533799	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_128535080_128535340_128535545_128535844_128535989_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018327	chr10	+	2180	12	NIC	ENSMUSG00000025359.11	novel	2130	11	NA	NA	-32	-109	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	18.002295537739	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTTTTGTTGCTGTTCGT	NA	False	NA	9	True	AATAAA	-20	NA	128541016	128555998	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_+_128541154_128542104_128542228_128549913_128550025_128550150_128550298_128551089_128551225_128551395_128551558_128551795_128552420_128553619_128553737_128553926_128554012_128554466_128554673_128554768_128554857_128555753
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018343	chr10	+	197	1	Intergenic	novelGene_596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGGTGGCCGGGCATGG	NA	False	NA	NA	False	NA	NA	NA	128561084	128561281	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_128561100_128561300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018385	chr10	+	3041	7	FSM	ENSMUSG00000025354.6	ENSMUST00000026410.2	4229	7	-105	1293	-12	650	multi-exon	FALSE	canonical	3	32	junction_1	125.746658890892	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTCCTTCTCTTCTTTA	4033	False	NA	NA	False	TATAAA	-19	NA	128641439	128654022	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_128641584_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018394	chr10	-	1002	4	FSM	ENSMUSG00000025353.6	ENSMUST00000219524.2	724	4	30	-308	-9	67	multi-exon	FALSE	canonical	3	322	junction_3	240.049994792751	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTCTACTCCTTTGG	NA	False	NA	2	True	TATAAA	-19	NA	128657484	128654283	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_128654885_128655822_128655975_128656129_128656305_128657410
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018396	chr10	-	1092	4	FSM	ENSMUSG00000025353.6	ENSMUST00000026409.5	1573	4	-32	513	19	67	multi-exon	FALSE	canonical	3	462	junction_3	176.577335905703	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTCTACTCCTTTGG	NA	False	NA	2	True	TATAAA	-19	NA	128657495	128654283	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_-_128654885_128655822_128655975_128656129_128656384_128657410
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018415	chr10	+	930	11	FSM	ENSMUSG00000078427.4	ENSMUST00000105230.4	918	11	0	-12	0	0	multi-exon	FALSE	canonical	3	1529	junction_8	1099.33345259753	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTATTAGGTGTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	128657762	128713498	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_128657841_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018421	chr10	+	920	11	NIC	ENSMUSG00000078427.4	novel	953	12	NA	NA	-5	2	combination_of_known_junctions	FALSE	canonical	3	1288	junction_2	1269.59119798461	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTATTAGGTGTTCCTT	NA	False	NA	NA	False	AATAAA	-20	NA	128657771	128713500	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_+_128657841_128669180_128669281_128674315_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018425	chr10	+	970	12	NNC	ENSMUSG00000078427.4	novel	1084	12	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	390	junction_1	1520.20222121546	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTATTAGGTGTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	128657775	128713498	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_+_128657841_128660647_128660701_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018438	chr10	+	845	10	NIC	ENSMUSG00000078427.4	novel	918	11	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	355	junction_8	1412.89957529774	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTATTAGGTGTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	128657778	128713498	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr10_+_128657841_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128708289_128708380_128713201
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018455	chr10	+	950	12	NNC	ENSMUSG00000078427.4	novel	1084	12	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	390	junction_1	1539.19360662578	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTATTAGGTGTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	128657792	128713498	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr10_+_128657841_128660647_128660701_128669180_128669281_128674315_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018457	chr10	+	197	1	Intergenic	novelGene_597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTATAATGGTGTACAC	NA	False	NA	NA	False	NA	NA	NA	128664199	128664396	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_128664200_128664400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018460	chr10	-	233	1	Intergenic	novelGene_598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCACAATTAATATATGCTA	9568	False	NA	NA	False	AAAAAG	-22	NA	128667167	128666934	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_128666900_128667200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018473	chr10	-	265	1	Intergenic	novelGene_599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGACTTTTGCAGACAC	9855	False	NA	NA	False	TTTAAA	-4	NA	128734418	128734153	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_-_128734200_128734400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018479	chr10	+	927	8	FSM	ENSMUSG00000025351.15	ENSMUST00000026407.9	1063	8	146	-10	-77	3	multi-exon	FALSE	canonical	3	3700	junction_1	227.971623726484	499	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTCTCAGTTTATCTTA	500	False	NA	38	True	ATTAAA	-30	NA	128745713	128748694	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr10_+_128745828_128746263_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018501	chr10	+	198	1	Intergenic	novelGene_600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACTAGAACATACAAATCC	NA	False	NA	NA	False	NA	NA	NA	130283387	130283585	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_130283400_130283600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018512	chr10	+	204	1	Intergenic	novelGene_601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATTGTAGCCAGGTGAT	2135	False	NA	NA	False	NA	NA	NA	130365817	130366021	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr10_+_130365800_130366000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018533	chr11	+	183	1	Intergenic	novelGene_602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGTAAAAGAACTGAAATCA	NA	False	NA	NA	False	NA	NA	NA	3122087	3122270	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_3122100_3122300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018541	chr11	+	151	1	Antisense	novelGene_ENSMUSG00000023764.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGAAACAGGGTTTCTC	4584	False	NA	8	True	NA	NA	NA	3135688	3135839	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr11_+_3135700_3135800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018552	chr11	+	3524	18	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_1	53.324624433129	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGTACTGTGTTTATT	3862	False	NA	14	True	ATTAAA	-30	NA	3152680	3194588	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018554	chr11	+	3596	19	FSM	ENSMUSG00000020454.18	ENSMUST00000110049.8	3614	19	18	0	-8	0	multi-exon	TRUE	canonical	3	81	junction_10	64.4808326386825	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGTACTGTGTTTATT	3862	False	NA	14	True	ATTAAA	-30	NA	3152680	3194588	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018557	chr11	+	3791	19	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	67.055647611094	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGTACTGTGTTTATT	3862	False	NA	14	True	ATTAAA	-30	NA	3152680	3194588	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_3152993_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018560	chr11	+	3719	18	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	56.8118974819688	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGTACTGTGTTTATT	3862	False	NA	14	True	ATTAAA	-30	NA	3152680	3194588	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_3152993_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018632	chr11	+	235	1	Intergenic	novelGene_603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATTATTTGTTAAAGAAA	NA	False	NA	NA	False	AAAAAG	-18	NA	3277887	3278122	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_3277900_3278100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018645	chr11	-	3513	16	FSM	ENSMUSG00000020451.18	ENSMUST00000101638.4	3514	16	1	0	1	0	multi-exon	FALSE	canonical	3	97	junction_14	50.0611182012104	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGACAGAGAGTGCCAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	3359173	3294255	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3342916_3343017_3359045
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018649	chr11	-	3721	15	FSM	ENSMUSG00000020451.18	ENSMUST00000101642.10	3693	15	-28	0	-28	0	multi-exon	FALSE	canonical	3	120	junction_14	38.572023804931	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGACAGAGAGTGCCAAAG	9786	False	NA	-6	True	AATAAA	-19	NA	3321404	3294255	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3320968
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018677	chr11	+	164	1	Intergenic	novelGene_604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTAGAAAAGCATTCCTC	NA	False	NA	NA	False	NA	NA	NA	3387465	3387629	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_3387500_3387600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018687	chr11	+	711	5	FSM	ENSMUSG00000075702.11	ENSMUST00000094469.6	707	5	-4	0	-4	0	multi-exon	FALSE	canonical	3	143	junction_4	6.04152298679729	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGAGTCTCTTCTTATTT	NA	False	NA	22	True	ACTAAA	-14	NA	3464862	3467351	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_3465074_3466260_3466297_3466485_3466521_3466841_3466921_3467001
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018701	chr11	-	3321	21	FSM	ENSMUSG00000020439.18	ENSMUST00000020721.15	3335	21	15	-1	15	1	multi-exon	FALSE	canonical	3	70	junction_20	9.90908673894825	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTTTTCTCTGCTGT	8152	False	NA	-5	True	GATAAA	-18	NA	3489277	3467521	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3489111
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018722	chr11	+	5638	26	FSM	ENSMUSG00000034543.16	ENSMUST00000096441.5	5656	26	18	0	18	0	multi-exon	FALSE	canonical	2	298	junction_20	51.0520361983731	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCGTTCAGTACATTC	NA	False	NA	75	True	TATAAA	-16	NA	3599208	3640477	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018737	chr11	+	5624	26	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	35	0	intron_retention	FALSE	canonical	2	109	junction_20	77.0319414269172	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCGTTCAGTACATTC	NA	False	NA	75	True	TATAAA	-16	NA	3599225	3640477	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018755	chr11	+	198	1	Intergenic	novelGene_605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATAGTTGAAAGCTGGGT	NA	False	NA	NA	False	NA	NA	NA	3776949	3777147	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_3776900_3777100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018777	chr11	-	1918	10	FSM	ENSMUSG00000020432.13	ENSMUST00000109993.9	2027	10	109	0	-6	0	multi-exon	FALSE	canonical	3	40	junction_9	35.4989132158461	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACGTAGAGTCCTGGT	NA	False	NA	-11	True	ATTAAA	-17	NA	3882050	3867191	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881588_3882012
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018792	chr11	+	2162	15	FSM	ENSMUSG00000020430.13	ENSMUST00000020705.5	2911	15	-29	778	-29	-778	multi-exon	FALSE	canonical	3	864	junction_12	97.3847042006336	792	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTCAGAAGCCTCC	NA	False	NA	30	True	NA	NA	NA	3913945	3929226	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_3914061_3918262_3918343_3919432_3919587_3920624_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018800	chr11	-	182	1	Intergenic	novelGene_606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAATAACAATTGGATAT	NA	False	NA	NA	False	NA	NA	NA	3987306	3987124	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_3987100_3987300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018809	chr11	-	1397	4	FSM	ENSMUSG00000004748.6	ENSMUST00000004868.6	1411	4	14	0	14	0	multi-exon	FALSE	canonical	3	154	junction_3	5.18544972870135	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTTTCATTTCCTCTT	NA	False	NA	1	True	AATAAA	-17	NA	4045431	4041479	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_4042300_4043800_4044034_4044388_4044517_4045215
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018816	chr11	+	178	1	Intergenic	novelGene_607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTAATTCTGTATTTTT	7716	False	NA	NA	False	NA	NA	NA	4042800	4042978	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_4042800_4043000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018830	chr11	+	181	1	Intergenic	novelGene_608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAGTTGTATGTA	1677	False	NA	NA	False	NA	NA	NA	4050304	4050485	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_4050300_4050500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018836	chr11	+	193	1	Intergenic	novelGene_609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTAGAACTGCACGTCC	NA	False	NA	NA	False	NA	NA	NA	4063850	4064043	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_4063800_4064000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018845	chr11	+	204	1	Intergenic	novelGene_610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAAGATTTCCTTGTGTC	7426	False	NA	NA	False	NA	NA	NA	4104305	4104509	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_4104300_4104500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018879	chr11	+	2296	3	FSM	ENSMUSG00000058755.4	ENSMUST00000075221.3	2272	3	-23	-1	-23	1	multi-exon	TRUE	canonical	3	46	junction_2	1.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTCAGTCTTTTATT	8270	False	NA	6	True	TTTAAA	-19	NA	4186396	4191027	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_4186914_4188405_4188543_4189385
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018892	chr11	+	189	1	Intergenic	novelGene_611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCTTCACAGAACAAAGG	9734	False	NA	NA	False	NA	NA	NA	4276404	4276593	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_4276400_4276600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018896	chr11	-	1936	11	FSM	ENSMUSG00000020419.12	ENSMUST00000109949.8	1343	11	-11	-582	10	13	multi-exon	FALSE	canonical	3	44	junction_4	69.004347689113	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTAACATGGGGTTTA	NA	False	NA	-7	True	AATAAA	-24	NA	4391093	4295800	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362281_4370703_4370731_4371588_4371610_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018902	chr11	+	187	1	Intergenic	novelGene_612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAACTCCAAGAGGAGAAC	9044	False	NA	NA	False	NA	NA	NA	4325206	4325393	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_4325200_4325400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018932	chr11	+	200	1	Intergenic	novelGene_613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	414	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCTTAAGCATTGACAG	NA	False	NA	NA	False	NA	NA	NA	4537930	4538130	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_4537900_4538100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018944	chr11	+	5006	20	FSM	ENSMUSG00000020412.17	ENSMUST00000070257.14	2650	20	-42	-2314	-42	0	multi-exon	FALSE	canonical	3	209	junction_9	44.9846388062843	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGAGTCTCCTGTGTGT	NA	False	NA	14	True	AATAAA	-23	NA	4587704	4635699	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018952	chr11	+	188	1	Intergenic	novelGene_614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGGGCTCACGTAGCCT	NA	False	NA	NA	False	NA	NA	NA	4627775	4627963	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_4627800_4628000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018962	chr11	+	207	1	Intergenic	novelGene_615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGTTTGCAAAAATGTATA	7712	False	NA	NA	False	TTTAAA	-3	NA	4645473	4645680	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_4645500_4645700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018978	chr11	-	515	3	FSM	ENSMUSG00000059534.9	ENSMUST00000151559.2	510	3	-2	-3	-2	1	multi-exon	FALSE	canonical	3	506	junction_1	31	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTTTTGCACGAGTCCTT	NA	False	NA	-5	True	AATAAA	-20	NA	4654336	4651971	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_4652221_4653903_4653990_4654156
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000018999	chr11	+	778	6	NNC	ENSMUSG00000009076.11	novel	792	6	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	287	junction_1	154.183786436836	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGCCTGTCTCTCTTG	NA	False	NA	13	True	TATAAA	-16	NA	4654682	4687669	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_+_4654713_4672357_4672512_4678584_4678648_4680186_4680268_4682066_4682179_4687331
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019007	chr11	-	2977	5	FSM	ENSMUSG00000009075.3	ENSMUST00000009219.3	2628	5	-355	6	-355	-6	multi-exon	FALSE	canonical	3	26	junction_3	5.21416340365355	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAAATGTCAGCCCTGGTT	7209	False	NA	-3	True	NA	NA	NA	4697133	4686897	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_4688949_4689123_4689278_4689553_4689667_4690368_4690513_4696618
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019051	chr11	+	1918	10	FSM	ENSMUSG00000034285.16	ENSMUST00000038570.9	1926	10	14	-6	14	6	multi-exon	FALSE	canonical	3	1103	junction_6	68.3294488507475	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTGTCTTCATCTACA	NA	False	NA	17	True	ATTAAA	-17	NA	4823964	4844206	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_4824104_4833367_4833496_4833725_4833772_4834021_4834117_4838879_4838951_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019058	chr11	+	1809	9	NIC	ENSMUSG00000034285.16	novel	1926	10	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	46	junction_4	409.499065169873	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGTGGTGTTGTCTTCAT	NA	False	NA	12	True	ATTAAA	-12	NA	4823997	4844201	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_4824104_4833367_4833496_4833725_4833772_4834021_4834117_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019065	chr11	+	184	1	Intergenic	novelGene_616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGTGAGGATTAGCTTT	NA	False	NA	NA	False	NA	NA	NA	4826987	4827171	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_4827000_4827200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019074	chr11	+	2264	20	FSM	ENSMUSG00000034274.12	ENSMUST00000038237.8	2235	20	-26	-3	-3	1	multi-exon	TRUE	canonical	3	228	junction_1	27.0805712775824	255	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGTAGCTCCTTGGG	NA	False	NA	24	True	ATTAAA	-21	NA	4845316	4878868	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_4845379_4849790_4849907_4851151_4851296_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019092	chr11	+	3952	21	FSM	ENSMUSG00000009090.18	ENSMUST00000009234.16	4085	21	73	60	-15	2	multi-exon	FALSE	canonical	3	239	junction_7	27.5174490096738	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGGCCAGTGTGTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	4936896	4992731	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019101	chr11	+	191	1	Intergenic	novelGene_617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCATCACTCGGGAGGCAA	8652	False	NA	NA	False	NA	NA	NA	4995609	4995800	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_4995600_4995800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019142	chr11	-	2354	16	NIC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	74	junction_8	1335.63462069535	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCCTCCTCTGTTCTCGT	NA	False	NA	-11	True	AATAAA	-25	NA	5049065	5019686	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019167	chr11	-	178	1	ISM	ENSMUSG00000009079.17	ENSMUST00000079949.13	2588	17	29192	208	817	0	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGAGTTTTTTTTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	5020074	5019896	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_-_5019900_5020100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019188	chr11	+	194	1	Intergenic	novelGene_618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTCCTGTGTGGCCCTG	NA	False	NA	NA	False	NA	NA	NA	5026542	5026736	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_5026500_5026700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019190	chr11	+	186	1	Intergenic	novelGene_619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAAAAGAAAGATGTGT	NA	False	NA	NA	False	NA	NA	NA	5027568	5027754	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_5027600_5027800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019191	chr11	-	2868	8	ISM	ENSMUSG00000009079.17	ENSMUST00000073308.11	2269	15	-9	10716	-9	4	5prime_fragment	FALSE	canonical	3	4248	junction_1	634.809243403248	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGAGCATTTTATGGTGT	NA	False	NA	-1	True	ATTAAA	-25	NA	5049076	5030413	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_-_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019198	chr11	+	200	1	Intergenic	novelGene_620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGACAAAAAACAGGAGTCA	5394	False	NA	NA	False	NA	NA	NA	5044552	5044752	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_5044600_5044800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019210	chr11	+	1881	9	FSM	ENSMUSG00000034175.14	ENSMUST00000101610.10	2333	9	454	-2	-53	0	multi-exon	FALSE	canonical	3	72	junction_2	51.4605431374369	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCTCCTGAGTGTCAG	NA	False	NA	18	True	AATAAA	-19	NA	5049379	5056093	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_5049567_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019224	chr11	-	4942	9	FSM	ENSMUSG00000020393.17	ENSMUST00000020662.15	4856	9	-86	0	-86	0	multi-exon	FALSE	canonical	3	45	junction_1	7.36121593216773	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGGTGAGGCCAGGCTGT	NA	False	NA	-4	True	AATAAA	-21	NA	5211644	5141551	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_5145122_5148309_5148395_5149501_5149712_5151696_5152030_5159938_5160093_5165406_5165532_5188410_5188503_5193774_5193938_5211434
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019247	chr11	+	2900	3	FSM	ENSMUSG00000020484.20	ENSMUST00000145588.2	987	3	-47	-1866	-37	-1	multi-exon	FALSE	canonical	3	908	junction_2	32	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCTGTTCTGTGATTTCT	NA	False	NA	33	True	ATTAAA	-16	NA	5470957	5475892	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_5471201_5471922_5472020_5473332
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019248	chr11	+	2600	4	NIC	ENSMUSG00000020484.20	novel	2129	5	NA	NA	-37	-1	intron_retention	FALSE	canonical	3	876	junction_3	39.9110121255887	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCTGTTCTGTGATTTCT	NA	False	NA	33	True	ATTAAA	-16	NA	5470957	5475892	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_5471201_5471922_5472020_5473332_5474385_5474684
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019271	chr11	+	189	1	Intergenic	novelGene_621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATACTGATCAACTTCCC	NA	False	NA	NA	False	NA	NA	NA	5628024	5628213	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_5628000_5628200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019286	chr11	-	875	3	FSM	ENSMUSG00000020477.11	ENSMUST00000020770.11	700	3	-20	-155	0	155	multi-exon	FALSE	canonical	3	2385	junction_2	231.5	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCCTCTCTTGGTCTC	NA	False	NA	0	True	NA	NA	NA	5657687	5654170	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_5654733_5657297_5657410_5657486
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019315	chr11	+	209	1	Intergenic	novelGene_622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAACTGAGGTGTAGCTGG	NA	False	NA	NA	False	NA	NA	NA	5657892	5658101	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_5657900_5658100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019329	chr11	+	183	1	Intergenic	novelGene_623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	302	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAAAACCCAAAACTTT	NA	False	NA	NA	False	NA	NA	NA	5694841	5695024	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_5694800_5695000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019368	chr11	-	1617	11	FSM	ENSMUSG00000020471.12	ENSMUST00000102922.10	1646	11	29	0	29	0	multi-exon	FALSE	canonical	3	869	junction_10	541.870242770352	713	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTCACTTGGGCATGT	9534	False	NA	2	True	AATAAA	-25	NA	5828263	5822179	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823567_5823688_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053_5825176_5826712_5826990_5828191
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019395	chr11	+	2474	7	FSM	ENSMUSG00000002741.10	ENSMUST00000002818.9	2541	7	67	0	67	0	multi-exon	FALSE	canonical	3	192	junction_4	17.3205080756888	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTCTTGTGTTTACTTT	NA	False	NA	19	True	GATAAA	-20	NA	5905759	5917780	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_5906005_5909296_5909380_5911187_5911289_5912336_5912442_5912692_5912759_5914560_5914663_5916008
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019415	chr11	-	3817	19	FSM	ENSMUSG00000057897.15	ENSMUST00000002817.12	1872	19	84	-2029	0	1	multi-exon	FALSE	canonical	3	94	junction_4	16.5324223165972	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAAATTGCTTCCAGTAC	2964	False	NA	NA	False	NA	NA	NA	6015658	5919642	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019441	chr11	-	1925	14	NNC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_12	271.174412749761	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTGTTGTCTGGCTCTG	4516	False	NA	-2	True	NA	NA	NA	6217745	6208918	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216968_6217417_6217580_6217659
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019444	chr11	-	1961	14	FSM	ENSMUSG00000004393.11	ENSMUST00000004507.11	1956	14	-5	0	-5	0	multi-exon	FALSE	canonical	3	937	junction_7	74.9654752883426	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTGTTGTCTGGCTCTG	4484	False	NA	-2	True	NA	NA	NA	6217777	6208918	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217659
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019458	chr11	-	1828	14	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	3	-45	combination_of_known_junctions	FALSE	canonical	3	36	junction_12	280.168482699651	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGGAAAAGATTGCTTTC	4518	False	NA	-6	True	AATAAA	-35	NA	6217743	6208963	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216918_6217417_6217580_6217659
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019479	chr11	-	2162	4	FSM	ENSMUSG00000004394.13	ENSMUST00000130621.2	886	4	16	-1292	11	0	multi-exon	FALSE	canonical	3	463	junction_2	40.4337592722825	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATTCTCCCTTTGTTTT	5354	False	NA	NA	False	ATTAAA	-24	NA	6224854	6220368	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019497	chr11	+	4151	23	FSM	ENSMUSG00000020456.18	ENSMUST00000003461.15	4127	23	-21	-3	-21	3	multi-exon	FALSE	canonical	3	535	junction_8	60.360778272973	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCTGTCGTGTGTTCC	NA	False	NA	17	True	CATAAA	-21	NA	6241611	6306645	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019504	chr11	+	4133	23	NIC	ENSMUSG00000020456.18	novel	4075	24	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_4	180.942853176638	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	14	True	CATAAA	-18	NA	6241614	6306642	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266764_6266856_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019522	chr11	+	4373	23	NIC	ENSMUSG00000020456.18	novel	702	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	139.064294839378	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	14	True	CATAAA	-18	NA	6241984	6306642	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_6242292_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019535	chr11	+	185	1	Intergenic	novelGene_624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAAGAATGTTGACTTT	5144	False	NA	NA	False	NA	NA	NA	6278910	6279095	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_6278900_6279100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019545	chr11	-	221	1	Intergenic	novelGene_625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGCAGGGTCTGATAGT	NA	False	NA	NA	False	NA	NA	NA	6335241	6335020	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_6335000_6335200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019553	chr11	+	3933	20	NIC	ENSMUSG00000041164.16	novel	4116	20	NA	NA	3	0	combination_of_known_junctions	TRUE	canonical	3	65	junction_1	82.0795843784869	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTGAGTCCTTCCTTTG	4626	False	NA	20	True	ATTAAA	-20	NA	6339076	6356074	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_6339141_6345124_6345289_6345567_6345679_6345757_6345873_6346327_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019561	chr11	+	4226	20	FSM	ENSMUSG00000041164.16	ENSMUST00000012612.11	4199	20	-27	0	-27	0	multi-exon	FALSE	canonical	3	175	junction_1	53.7737643143183	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGCTCAGGATATCCCT	4886	False	NA	15	True	AATAAA	-18	NA	6339336	6356158	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019582	chr11	-	182	1	Intergenic	novelGene_626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATGTAAATACATAAGTAA	3127	False	NA	0	True	NA	NA	NA	6364009	6363827	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_6363800_6364000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019602	chr11	+	2956	3	NIC	ENSMUSG00000071866.13	novel	2853	4	NA	NA	-1	0	intron_retention	FALSE	canonical	3	36680	junction_2	619	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGTCCTTGTTTGTAT	NA	False	NA	-3	True	AATAAA	-14	NA	6365866	6369812	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_6368315_6369112_6369286_6369477
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019613	chr11	+	3945	1	NIC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGTCCTTGTTTGTAT	NA	False	NA	-3	True	AATAAA	-14	NA	6365867	6369812	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_6365900_6369800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019632	chr11	-	1632	5	FSM	ENSMUSG00000041126.17	ENSMUST00000109737.9	1633	5	1	0	1	0	multi-exon	FALSE	canonical	3	3133	junction_4	74.0485482639599	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGTCCTGGTCCTGA	NA	False	NA	-5	True	AATAAA	-24	NA	6394442	6377228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_6378433_6379095_6379226_6383723_6383838_6389375_6389454_6394336
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019634	chr11	-	601	4	FSM	ENSMUSG00000041126.17	ENSMUST00000093346.6	519	4	-79	-3	12	3	multi-exon	FALSE	canonical	3	328	junction_2	1363.86957669061	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTCAGTATTTCTTC	NA	False	NA	0	True	GATAAA	-19	NA	6394431	6378134	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_6378433_6379095_6379226_6389375_6389454_6394336
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019644	chr11	-	166	1	Intergenic	novelGene_627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAGTTCCAATTGTTAA	NA	False	NA	NA	False	NA	NA	NA	6379805	6379639	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_6379600_6379800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019652	chr11	+	171	1	Intergenic	novelGene_628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTCTACTGAGGTACTGG	2875	False	NA	NA	False	NA	NA	NA	6406749	6406920	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_6406700_6406900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019689	chr11	-	2333	13	FSM	ENSMUSG00000000384.16	ENSMUST00000156969.8	2324	13	-9	0	-9	0	multi-exon	FALSE	canonical	3	74	junction_1	134.990406037697	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGCCACTGGCTTTTCT	NA	False	NA	-5	True	AATAAA	-19	NA	6576052	6565597	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_6565767_6566557_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575964
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019693	chr11	-	3145	12	FSM	ENSMUSG00000000384.16	ENSMUST00000000394.14	2290	12	-30	-825	-6	0	multi-exon	FALSE	canonical	3	438	junction_8	40.423788103394	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGCCACTGGCTTTTCT	NA	False	NA	-5	True	AATAAA	-19	NA	6576073	6565597	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575964
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019729	chr11	-	198	1	Intergenic	novelGene_629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCACGTTGGTCAATACAA	NA	False	NA	NA	False	NA	NA	NA	6579324	6579126	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_6579100_6579300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019733	chr11	+	190	1	Intergenic	novelGene_630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATGAAGAAACCTACAAC	NA	False	NA	NA	False	NA	NA	NA	6603245	6603435	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_6603200_6603400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019746	chr11	-	2447	5	FSM	ENSMUSG00000020427.12	ENSMUST00000020702.11	2421	5	-26	0	0	0	multi-exon	FALSE	canonical	3	177	junction_4	11.7340317027013	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTTTGTCTGTTTCTGG	NA	False	NA	NA	False	AATAAA	-23	NA	7163923	7156085	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_7157507_7158368_7158509_7159458_7159579_7160018_7160246_7163384
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019757	chr11	+	185	1	Intergenic	novelGene_631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATATTGAGACGTGGG	NA	False	NA	NA	False	NA	NA	NA	8493038	8493223	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_8493000_8493200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019765	chr11	+	186	1	Intergenic	novelGene_632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAATCTGCTTTGCTT	NA	False	NA	NA	False	NA	NA	NA	8540202	8540388	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_8540200_8540400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019778	chr11	-	4603	8	NNC	ENSMUSG00000020413.12	novel	4640	8	NA	NA	3	0	intron_retention	FALSE	canonical	3	72	junction_5	46.4880937137979	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAATTCATTTATTAAT	NA	False	NA	92	True	AATAAA	-21	NA	8961157	8943136	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957602_8960240_8960418_8960496_8960625_8961058
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019784	chr11	-	4622	8	FSM	ENSMUSG00000020413.12	ENSMUST00000020683.10	4640	8	18	0	-9	0	multi-exon	FALSE	canonical	3	104	junction_5	37.6557988054094	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAATTCATTTATTAAT	NA	False	NA	92	True	AATAAA	-21	NA	8961173	8943136	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957605_8960240_8960418_8960496_8960625_8961058
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019811	chr11	+	1254	9	FSM	ENSMUSG00000020407.14	ENSMUST00000164791.8	1252	9	2	-4	2	1	multi-exon	FALSE	canonical	3	2502	junction_1	159.654656602932	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGACTCTGCGGTAGAG	NA	False	NA	27	True	AATAAA	-21	NA	9068508	9086171	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_9068661_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019825	chr11	+	1233	9	NIC	ENSMUSG00000020407.14	novel	518	6	NA	NA	-53	1	combination_of_known_junctions	FALSE	canonical	3	101	junction_1	905.183821110386	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTGACTCTGCGGTA	NA	False	NA	24	True	AATAAA	-18	NA	9068733	9086168	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_9068868_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019846	chr11	+	204	1	Intergenic	novelGene_633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGCCTCATTGTTAATT	308	False	NA	NA	False	NA	NA	NA	11744436	11744640	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_11744400_11744600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019872	chr11	-	2756	2	FSM	ENSMUSG00000035455.13	ENSMUST00000171080.8	2844	2	3	85	0	-85	multi-exon	FALSE	canonical	3	48	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACGGAGTTGCTTCATTTT	NA	False	NA	-6	True	AATAAA	-23	NA	11758959	11750372	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_11753064_11758894
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019890	chr11	-	2858	3	FSM	ENSMUSG00000035455.13	ENSMUST00000171938.2	2974	3	30	86	0	-86	multi-exon	FALSE	canonical	3	61	junction_2	284.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACGGAGTTGCTTCATTT	NA	False	NA	-7	True	AATAAA	-22	NA	11758932	11750373	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_11753064_11756095_11756216_11758884
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019911	chr11	+	200	1	Intergenic	novelGene_634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATCCACAAATAAGAGATAA	NA	False	NA	NA	False	NA	NA	NA	11858370	11858570	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_11858400_11858600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019918	chr11	-	5060	17	FSM	ENSMUSG00000020176.18	ENSMUST00000093321.12	5061	17	1	0	1	0	multi-exon	TRUE	canonical	3	35	junction_14	7.38135319572231	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTCCTGTCGTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	11987400	11880507	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_11883610_11884198_11884293_11886717_11886806_11887000_11887068_11887806_11887924_11888409_11888485_11893881_11893981_11894815_11894927_11895494_11895633_11895963_11896033_11896686_11896803_11901502_11901660_11904743_11904909_11917531_11917686_11920422_11920643_11937595_11937675_11987191
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019927	chr11	-	5381	13	FSM	ENSMUSG00000020173.18	ENSMUST00000109650.8	5271	13	-110	0	-9	0	multi-exon	FALSE	canonical	3	119	junction_8	114.138895649117	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGTGTGGACTTCATGC	NA	False	NA	-1	True	AATAAA	-20	NA	12414969	12186675	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019929	chr11	-	5450	14	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	110.433304726878	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGTGTGGACTTCATGC	NA	False	NA	-1	True	AATAAA	-20	NA	12414954	12186675	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203079_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019946	chr11	-	5456	14	NIC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	235	junction_6	74.428711772371	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGTGTGGACTTCATGC	NA	False	NA	-1	True	AATAAA	-20	NA	12414969	12186675	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019981	chr11	+	192	1	Intergenic	novelGene_635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGAATAGATCCC	NA	False	NA	NA	False	NA	NA	NA	12373881	12374073	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_12373900_12374100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000019988	chr11	+	194	1	Intergenic	novelGene_636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTTCTGGAGGCTGTTG	NA	False	NA	NA	False	NA	NA	NA	14067170	14067364	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_14067200_14067400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020001	chr11	+	196	1	Intergenic	novelGene_637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATCTCCATCTTCATTTT	NA	False	NA	NA	False	NA	NA	NA	16699756	16699952	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_16699800_16700000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020011	chr11	+	2840	6	FSM	ENSMUSG00000033953.11	ENSMUST00000102880.5	2859	6	26	-7	26	7	multi-exon	FALSE	canonical	3	579	junction_5	55.0962793662149	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGTGTCAGCTTTGAT	NA	False	NA	18	True	AATAAA	-22	NA	17109288	17150382	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_17109543_17132106_17132147_17142956_17143134_17144216_17144277_17144668_17144854_17148258
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020015	chr11	-	1578	7	FSM	ENSMUSG00000020116.8	ENSMUST00000020317.8	1544	7	-31	-3	-31	3	multi-exon	FALSE	canonical	3	1392	junction_5	81.0276016072438	713	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCTCTTTTTCTAACAT	NA	False	NA	51	True	AGTAAA	-22	NA	17161599	17153194	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_17154002_17154500_17154572_17158788_17158907_17159076_17159138_17159310_17159395_17160987_17161138_17161312
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020027	chr11	+	2049	8	FSM	ENSMUSG00000078970.6	ENSMUST00000046955.7	2002	8	-39	-8	-39	8	multi-exon	FALSE	canonical	3	217	junction_1	21.86601127274	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGGCGTTGATTCTTTCC	2432	False	NA	16	True	AATAAA	-18	NA	17161878	17183804	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_17162147_17169013_17169115_17172196_17172328_17174548_17174651_17177160_17177277_17178140_17178276_17179768_17179867_17182706
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020052	chr11	-	3066	6	FSM	ENSMUSG00000016984.8	ENSMUST00000076661.7	4185	6	-14	1133	-14	-1133	multi-exon	FALSE	canonical	3	153	junction_2	14.7322774885623	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTTTTGTGTCATTA	NA	False	NA	NA	False	ATTAAA	-20	NA	17903889	17889888	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_17890351_17895606_17897568_17897774_17897888_17902251_17902329_17902577_17902704_17903562
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020065	chr11	+	209	1	Intergenic	novelGene_638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTCCGGCAGAATAGCT	NA	False	NA	NA	False	NA	NA	NA	17899565	17899774	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_17899600_17899800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020072	chr11	+	230	1	Intergenic	novelGene_639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACTCAGATGGGTACCAA	NA	False	NA	NA	False	NA	NA	NA	17925346	17925576	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_17925300_17925600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020080	chr11	+	170	1	Intergenic	novelGene_640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTTGTTTTTCGAGA	NA	False	NA	NA	False	NA	NA	NA	19859740	19859910	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_19859700_19859900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020104	chr11	-	1960	1	ISM	ENSMUSG00000020152.8	ENSMUST00000000137.8	3631	9	48650	0	48604	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAATTTTGTCTTTTTCT	NA	False	NA	-4	True	AATAAA	-19	NA	20014263	20012303	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_-_20012300_20014300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020119	chr11	+	177	1	Intergenic	novelGene_641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGAGTATAACTTCAAGG	7340	False	NA	NA	False	NA	NA	NA	20046416	20046593	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_20046400_20046600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020123	chr11	-	200	1	Intergenic	novelGene_642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGGAACTACCCATCTGC	7592	False	NA	NA	False	NA	NA	NA	20056657	20056457	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_20056500_20056700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020132	chr11	+	179	1	Intergenic	novelGene_643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAAAGCCCTTCCC	1535	False	NA	NA	False	NA	NA	NA	20114611	20114790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_20114600_20114800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020155	chr11	-	5425	7	FSM	ENSMUSG00000044066.15	ENSMUST00000050611.14	4804	7	2	-623	2	623	multi-exon	FALSE	canonical	3	49	junction_3	29.8756682863422	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCATCTAGCGTTCATGT	3057	False	NA	NA	False	AATAAA	-20	NA	20199416	20176413	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_20179482_20180423_20180595_20186005_20186103_20188465_20188589_20189195_20190699_20191885_20192239_20199306
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020164	chr11	-	174	1	Intergenic	novelGene_644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAAAGTTCAAG	NA	False	NA	NA	False	NA	NA	NA	20180920	20180746	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_20180700_20180900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020171	chr11	-	2784	3	FSM	ENSMUSG00000044066.15	ENSMUST00000162811.2	2788	3	5	-1	5	0	multi-exon	FALSE	canonical	3	111	junction_1	11	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTAGCTCAGTTGACT	3049	False	NA	-8	True	AATAAA	-17	NA	20199424	20188385	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_20190699_20191885_20192239_20199306
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020183	chr11	-	3944	8	FSM	ENSMUSG00000020142.13	ENSMUST00000109594.8	3926	8	-43	25	-43	0	multi-exon	FALSE	canonical	3	286	junction_4	11.5440593433354	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGTAACGTGTTTTTC	7718	False	NA	-5	True	NA	NA	NA	20282756	20252204	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_20254501_20256465_20256601_20257891_20258087_20258403_20258638_20263915_20264083_20268659_20268723_20270191_20270235_20281945
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020193	chr11	+	198	1	Intergenic	novelGene_645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGATCCTCCTGCCTCA	NA	False	NA	NA	False	NA	NA	NA	20358295	20358493	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_20358300_20358500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020200	chr11	+	211	1	Intergenic	novelGene_646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACTTTCCTTCTATCTCC	NA	False	NA	NA	False	NA	NA	NA	20398404	20398615	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_20398400_20398600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020203	chr11	+	1896	1	ISM	ENSMUSG00000049800.14	ENSMUST00000093292.11	5647	2	107792	0	3971	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTCACAGTTTTCTTGT	7083	False	NA	17	True	AATAAA	-17	NA	20601125	20603021	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_+_20601100_20603000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020208	chr11	-	3979	9	FSM	ENSMUSG00000049659.16	ENSMUST00000035350.12	3998	9	19	0	19	0	multi-exon	FALSE	canonical	3	125	junction_7	17.066048165876	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGCCTTTTGTCTTTGTA	9279	False	NA	NA	False	AATAAA	-16	NA	20691570	20635083	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_20636199_20642464_20642589_20648312_20648374_20653710_20653834_20658680_20658738_20659619_20659747_20662163_20662316_20675684_20677640_20691305
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020229	chr11	+	3513	7	FSM	ENSMUSG00000020134.14	ENSMUST00000093290.12	3514	7	5	-4	5	4	multi-exon	FALSE	canonical	3	114	junction_5	13.7931142241337	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAATTTGTCTGTGTGGG	NA	False	NA	31	True	AGTAAA	-19	NA	21041295	21100327	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_21041679_21086045_21086186_21090563_21090694_21092555_21092658_21096914_21097113_21097257_21097447_21097956
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020237	chr11	+	182	1	Intergenic	novelGene_647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTCAGGGACAGGACAG	3391	False	NA	NA	False	NA	NA	NA	21100758	21100940	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_21100800_21100900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020244	chr11	+	4696	23	FSM	ENSMUSG00000020128.16	ENSMUST00000006221.14	4323	23	-385	12	-385	2	multi-exon	FALSE	canonical	3	201	junction_2	46.1409984237141	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAAGGCAACTTTTTTC	NA	False	NA	21	True	AATAAA	-17	NA	21188895	21271124	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020279	chr11	-	1774	8	NNC	ENSMUSG00000001891.17	novel	2044	10	NA	NA	-6812	0	at_least_one_novel_splicesite	TRUE	canonical	3	32	junction_7	143.823020495642	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGCTGTCTAGTGCTCA	NA	False	NA	-7	True	AATAAA	-21	NA	21286704	21271672	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21286551
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020296	chr11	-	4666	23	NNC	ENSMUSG00000042302.15	novel	4971	25	NA	NA	-226	3	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	6.15250402560811	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCTGCAATTTATTTCC	9666	False	NA	0	True	AATAAA	-24	NA	22237021	21955824	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_21956872_21957082_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006529_22006628_22006782_22006922_22009136_22009262_22018358_22018507_22039524_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096626_22101066_22101190_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487_22235875_22237002
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020311	chr11	-	175	1	Intergenic	novelGene_648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAGAAGGAGAAGAAGGA	NA	False	NA	NA	False	NA	NA	NA	22726570	22726395	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_22726400_22726600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020320	chr11	-	2703	2	FSM	ENSMUSG00000051650.12	ENSMUST00000062844.11	3057	2	364	-10	-192	10	multi-exon	FALSE	canonical	3	288	junction_1	0	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGATACTCTTTCTGTT	4333	False	NA	-18	True	AATAAA	-31	NA	22809737	22784736	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_22787196_22809493
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020332	chr11	+	177	1	Intergenic	novelGene_649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAAAGTTGTTGCT	NA	False	NA	NA	False	NA	NA	NA	22790484	22790661	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_22790500_22790700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020334	chr11	-	832	3	FSM	ENSMUSG00000051355.19	ENSMUST00000159081.8	4508	3	86	3590	-44	33	multi-exon	FALSE	canonical	3	2089	junction_1	53.5	285	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCTTGTCTCTGCTTGT	NA	False	NA	2	True	AATATA	-43	NA	22932296	22849725	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_22850058_22906410_22906693_22932078
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020352	chr11	+	4958	14	FSM	ENSMUSG00000007739.11	ENSMUST00000173867.8	2484	14	-18	-2456	-18	2456	multi-exon	FALSE	canonical	3	4673	junction_2	338.771431558561	1545	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTTTCAAGTTGATAAAA	NA	False	NA	17	True	AATAAA	-18	NA	22940500	22956236	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020371	chr11	+	229	1	Intergenic	novelGene_650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTTGACTCCTACTGCC	NA	False	NA	NA	False	TTTAAA	-3	NA	23047476	23047705	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_23047500_23047700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020379	chr11	-	180	1	Intergenic	novelGene_651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAATTAACTTAAAA	NA	False	NA	NA	False	NA	NA	NA	23077580	23077400	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_23077400_23077600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020397	chr11	+	230	1	Intergenic	novelGene_652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATTTCATACATGTATT	NA	False	NA	NA	False	NA	NA	NA	23252608	23252838	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_23252600_23252800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020402	chr11	-	183	1	Intergenic	novelGene_653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAATACATCGAACCTTA	NA	False	NA	NA	False	NA	NA	NA	23271589	23271406	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_23271400_23271600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020415	chr11	-	180	1	Intergenic	novelGene_654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAAGGAAGTTA	NA	False	NA	NA	False	NA	NA	NA	23307473	23307293	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_23307300_23307500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020429	chr11	-	1791	9	FSM	ENSMUSG00000020288.14	ENSMUST00000020529.13	3023	9	45	1187	45	-151	multi-exon	TRUE	canonical	3	225	junction_2	27.6394193137265	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTGCTTTATTTCCT	NA	False	NA	-2	True	AATAAA	-22	NA	23447985	23439733	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978_23445065_23446690_23446882_23447774
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020435	chr11	+	225	1	Intergenic	novelGene_655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAGCCTACAGATATGTT	NA	False	NA	NA	False	NA	NA	NA	23452037	23452262	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_23452000_23452300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020457	chr11	-	3743	4	FSM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	39	364	39	-364	multi-exon	FALSE	canonical	3	429	junction_1	13.1993265821489	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTTTTTAAGATTATA	NA	False	NA	NA	False	ATTAAA	-17	NA	23615920	23596842	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_23599591_23600929_23601056_23605435_23606131_23615746
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020480	chr11	+	180	1	Intergenic	novelGene_656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCAGGCACATTTCATG	NA	False	NA	NA	False	NA	NA	NA	23680575	23680755	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_23680600_23680800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020485	chr11	+	189	1	Intergenic	novelGene_657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTCAGACTTAAAAATAC	NA	False	NA	NA	False	NA	NA	NA	23717599	23717788	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_23717600_23717800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020492	chr11	+	187	1	Intergenic	novelGene_658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAATCAACAAGATCCAGG	8726	False	NA	NA	False	NA	NA	NA	23763267	23763454	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_23763300_23763500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020502	chr11	-	3760	22	FSM	ENSMUSG00000020273.14	ENSMUST00000020513.10	3747	22	-13	0	-13	0	multi-exon	FALSE	canonical	3	117	junction_1	18.5612914946701	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGTCTTTAATTTTTT	1256	False	NA	-1	True	TTTAAA	-8	NA	23845266	23812645	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23845021
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020511	chr11	+	190	1	Intergenic	novelGene_659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTAAGAGTTTGAATCT	6389	False	NA	NA	False	NA	NA	NA	23901188	23901378	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_23901200_23901400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020538	chr11	-	175	1	Intergenic	novelGene_660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTTTAAAGAACAAA	NA	False	NA	NA	False	NA	NA	NA	25973839	25973664	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_25973700_25973800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020547	chr11	+	193	1	Intergenic	novelGene_661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAATTAGAAGCTGTTAA	NA	False	NA	NA	False	NA	NA	NA	26244628	26244821	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_26244600_26244800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020560	chr11	+	189	1	Intergenic	novelGene_662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCAAATAGTTGTATCTT	NA	False	NA	NA	False	NA	NA	NA	26408668	26408857	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_26408700_26408900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020575	chr11	+	238	1	Intergenic	novelGene_663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATGTGAGGCCCCTGTAA	NA	False	NA	NA	False	TATAAA	-36	NA	26927855	26928093	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_26927900_26928100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020582	chr11	+	200	1	Intergenic	novelGene_664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	294	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGAAAGAGGGAAGTTTT	NA	False	NA	NA	False	NA	NA	NA	28795741	28795941	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_28795700_28795900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020597	chr11	+	3357	28	FSM	ENSMUSG00000020464.16	ENSMUST00000020756.9	2707	28	-6	-644	-2	644	multi-exon	FALSE	canonical	0	0	junction_19	125.489275633577	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTAAGGTATGTTTAT	NA	False	NA	NA	False	TTTAAA	-22	NA	29080741	29112472	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020600	chr11	+	2534	28	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	-1	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_19	159.252962838496	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTATTTTTATATCTTA	NA	False	NA	5	True	AATAAA	-17	NA	29080742	29111677	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103258_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020621	chr11	+	5096	16	FSM	ENSMUSG00000020463.16	ENSMUST00000020755.12	5125	16	29	0	29	0	multi-exon	FALSE	canonical	3	241	junction_14	38.0796825383593	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACGTGTTTTAATCACTA	NA	False	NA	23	True	AATAAA	-35	NA	29122918	29170797	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020644	chr11	-	1572	10	FSM	ENSMUSG00000020462.15	ENSMUST00000020754.10	1664	10	92	0	-29	0	multi-exon	FALSE	canonical	3	210	junction_4	19.5037191768236	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGATGTTTTCTCTTCA	NA	False	NA	NA	False	AATAAA	-19	NA	29197317	29171531	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_29171986_29172433_29172584_29172743_29172884_29175856_29175960_29179907_29179960_29180585_29180674_29184357_29184473_29194058_29194161_29195085_29195151_29197014
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020658	chr11	-	922	2	FSM	ENSMUSG00000032673.6	ENSMUST00000039900.4	918	2	-4	0	-4	0	multi-exon	FALSE	canonical	3	382	junction_1	0	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGTGTCTTTAATTTG	NA	False	NA	-1	True	AATAAA	-23	NA	29465037	29462875	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_29463677_29464916
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020666	chr11	+	2632	14	FSM	ENSMUSG00000020459.15	ENSMUST00000020749.13	2425	14	-34	-173	6	173	multi-exon	FALSE	canonical	3	41	junction_1	55.902387454177	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAAATATTTTCCCTTCA	NA	False	NA	6	True	NA	NA	NA	29476413	29495452	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_29476488_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020671	chr11	+	2978	14	FSM	ENSMUSG00000020459.15	ENSMUST00000093239.11	2741	14	-26	-211	-5	180	multi-exon	FALSE	canonical	3	166	junction_5	30.3862706462472	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCCTTCATTTAAAT	NA	False	NA	13	True	NA	NA	NA	29476430	29495459	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_29476844_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020690	chr11	-	619	6	FSM	ENSMUSG00000020460.16	ENSMUST00000102845.11	791	6	177	-5	-41	5	multi-exon	FALSE	canonical	0	0	junction_3	5362.30439270282	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGCTTTATTGTACAT	NA	False	NA	-26	True	AATAAA	-21	NA	29497932	29495840	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_29496030_29496290_29496423_29496702_29496789_29497205_29497261_29497680_29497746_29497840
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020693	chr11	-	636	5	FSM	ENSMUSG00000020460.16	ENSMUST00000102844.4	637	5	5	-4	5	4	multi-exon	FALSE	canonical	0	0	junction_3	5966.04937856703	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGTGCTTTATTGTACA	NA	False	NA	-27	True	AATAAA	-20	NA	29497855	29495841	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_29496030_29496290_29496423_29496702_29496789_29497205_29497261_29497680
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020709	chr11	+	212	1	Intergenic	novelGene_665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1828	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCCGCAGCTCAGTGTG	NA	False	NA	NA	False	NA	NA	NA	29616740	29616952	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_29616700_29617000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020720	chr11	+	4652	9	FSM	ENSMUSG00000020458.17	ENSMUST00000102843.10	4618	9	-33	-1	-33	1	multi-exon	FALSE	canonical	0	0	junction_2	355.342066711781	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTTTAGTGTTTTAG	NA	False	NA	15	True	AATAAA	-15	NA	29642913	29692917	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_29643694_29655534_29655592_29656409_29658771_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020739	chr11	+	4595	9	NNC	ENSMUSG00000020458.17	novel	4618	9	NA	NA	26	0	intron_retention	FALSE	canonical	0	0	junction_2	355.342066711781	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTTTAGTGTTTTA	NA	False	NA	14	True	AATAAA	-14	NA	29642973	29692916	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_+_29643694_29655534_29655596_29656409_29658771_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020743	chr11	+	1613	7	FSM	ENSMUSG00000020458.17	ENSMUST00000060992.6	1773	7	160	0	160	0	multi-exon	FALSE	canonical	3	50	junction_1	322.410409605866	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTTTAGTGTTTTA	NA	False	NA	14	True	AATAAA	-14	NA	29668722	29692916	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_29668883_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020749	chr11	+	256	1	Intergenic	novelGene_666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAATAAAAACCCAATATAA	NA	False	NA	NA	False	TTTAAA	-1	NA	29787903	29788159	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_29787900_29788200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020766	chr11	-	8578	35	NIC	ENSMUSG00000020315.19	novel	8461	36	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	341	junction_32	94.310427564532	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATGACTAGCCGGTGTT	1821	False	NA	-7	True	ATTAAA	-15	NA	30148256	30049394	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_30050715_30051612_30051656_30053247_30053422_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30147723
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020775	chr11	+	184	1	Intergenic	novelGene_667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTACCCAAGAATAGCTTTA	NA	False	NA	5	True	NA	NA	NA	30432655	30432839	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_30432700_30432800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020783	chr11	-	680	4	FSM	ENSMUSG00000060923.6	ENSMUST00000074613.4	863	4	183	0	183	0	multi-exon	FALSE	canonical	3	29	junction_1	6.84754619472471	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTACTGTTGCCTA	NA	False	NA	NA	False	AATAAA	-15	NA	30599404	30455990	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_30456440_30582207_30582318_30583685_30583703_30599300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020785	chr11	+	191	1	Intergenic	novelGene_668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTTATATTGAAACTTG	NA	False	NA	NA	False	NA	NA	NA	30698338	30698529	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_30698300_30698500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020808	chr11	-	1887	14	FSM	ENSMUSG00000020311.18	ENSMUST00000073192.14	2532	14	-183	828	0	149	multi-exon	TRUE	canonical	2	57	junction_8	15.3746121325012	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTCTCACTTCATTCA	NA	False	NA	-15	True	GATAAA	-14	NA	30904335	30881601	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_30881849_30884671_30884748_30884981_30885060_30889496_30889622_30893038_30893099_30893698_30893861_30898078_30898209_30898299_30898524_30899942_30899978_30900559_30900624_30900740_30900819_30901306_30901388_30902571_30902677_30903913
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020818	chr11	+	1931	10	FSM	ENSMUSG00000020305.14	ENSMUST00000020551.13	3228	10	64	1233	11	138	multi-exon	FALSE	canonical	3	71	junction_7	7.49979423586054	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGCTGGATGTGACTT	NA	False	NA	13	True	AATAAA	-13	NA	30904458	31051471	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_30904570_30948312_30948522_30978907_30979067_31005457_31005571_31006101_31006238_31008821_31009000_31011388_31011587_31031361_31031623_31035000_31035132_31051036
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020830	chr11	-	3354	4	FSM	ENSMUSG00000020303.3	ENSMUST00000020546.3	3940	4	-2	588	-2	91	multi-exon	FALSE	canonical	3	131	junction_2	14.613540144522	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGCTCCTTGTGTGATT	NA	False	NA	-22	True	AGTAAA	-19	NA	31320076	31307894	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_31310529_31315331_31315544_31317725_31317869_31319711
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020836	chr11	-	177	1	Intergenic	novelGene_669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAAAGAATGTTGCT	NA	False	NA	NA	False	NA	NA	NA	31571862	31571685	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_31571700_31571900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020841	chr11	-	1416	4	FSM	ENSMUSG00000044502.17	ENSMUST00000058060.14	1394	4	9	-31	9	31	multi-exon	FALSE	canonical	3	568	junction_1	23.4141457717813	322	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACCTTAGAGCCTTGTT	NA	False	NA	2	True	AATAAA	-32	NA	31621876	31615149	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_31615868_31616736_31616934_31619243_31619369_31621500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020867	chr11	+	809	5	FSM	ENSMUSG00000040767.11	ENSMUST00000039601.10	821	5	17	-5	-14	5	multi-exon	FALSE	canonical	3	400	junction_3	16.768646337734	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAAAGCCATAGTACTCT	NA	False	NA	26	True	AATAAA	-27	NA	32155431	32158989	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_32155664_32156959_32157051_32157556_32157663_32158333_32158409_32158684
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020873	chr11	-	2925	18	FSM	ENSMUSG00000020282.19	ENSMUST00000020524.15	2946	18	21	0	1	0	multi-exon	TRUE	canonical	0	0	junction_2	19.5534933028863	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGATTTGTCACTGTTTC	NA	False	NA	-2	True	AATAAA	-35	NA	32172279	32159584	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_32160224_32160397_32160552_32160657_32160759_32160826_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32163518_32163951_32164110_32164181_32164305_32164392_32164603_32164909_32165124_32165933_32166065_32166141_32166283_32172168
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020882	chr11	+	1745	4	FSM	ENSMUSG00000020287.16	ENSMUST00000020528.14	1737	4	-8	0	-2	0	multi-exon	FALSE	canonical	3	333	junction_1	11.8977121983832	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGATGGCACGCGTGTGT	NA	False	NA	6	True	NA	NA	NA	32176502	32182700	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_32176718_32177751_32177950_32179848_32180054_32181573
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020891	chr11	-	2118	13	FSM	ENSMUSG00000020289.16	ENSMUST00000020530.12	2865	13	43	704	-6	268	multi-exon	TRUE	canonical	3	148	junction_6	11.6770786871831	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTGTATGTGTGCC	4610	False	NA	-1	True	AATATA	-17	NA	32217664	32182666	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_32183117_32183903_32184097_32184731_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020912	chr11	-	186	1	Intergenic	novelGene_670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAATCCCAGCACTCAGG	1922	False	NA	NA	False	NA	NA	NA	32408007	32407821	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_32407800_32408000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020935	chr11	+	215	1	Intergenic	novelGene_671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGCCATGGGTCTGTTTC	4503	False	NA	NA	False	NA	NA	NA	32567572	32567787	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_32567600_32567800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020981	chr11	-	3398	11	FSM	ENSMUSG00000057113.14	ENSMUST00000075641.10	1633	11	23	-1788	23	1788	multi-exon	FALSE	canonical	3	16927	junction_8	1838.26714326292	1738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGGCTACCTGGTTC	NA	False	NA	NA	False	ATTAAA	-26	NA	33113183	33100498	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000020993	chr11	-	1275	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	1051	junction_7	5857.07688527306	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113077	33102509	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110435_33110827_33110922_33111105_33111226_33111547_33111628_33112921
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021000	chr11	-	3221	10	NIC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	16927	junction_7	1895.24750655715	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113075	33102509	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_33102853_33103985_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021008	chr11	-	1285	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	6177.79064795822	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113077	33102509	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109929_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021035	chr11	-	968	10	FSM	ENSMUSG00000057113.14	ENSMUST00000101375.5	966	10	0	-2	0	2	multi-exon	FALSE	canonical	3	29	junction_1	6470.30156337304	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTGGTGTCACTGATT	NA	False	NA	-5	True	ATTAAA	-13	NA	33113076	33105325	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_33105432_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021040	chr11	+	210	1	Intergenic	novelGene_672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTCAAGGACAGCCAGAG	NA	False	NA	NA	False	NA	NA	NA	33201846	33202056	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_33201800_33202100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021055	chr11	+	195	1	Intergenic	novelGene_673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAGGACCTTGTCAGGCA	NA	False	NA	NA	False	NA	NA	NA	33455947	33456142	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_33455900_33456100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021068	chr11	-	2519	12	FSM	ENSMUSG00000069910.3	ENSMUST00000093191.3	2505	12	-9	-5	-9	5	multi-exon	FALSE	canonical	3	139	junction_9	17.9669117367279	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTATTTTTTAATTCTAC	NA	False	NA	-2	True	AATAAA	-20	NA	34724477	34700011	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_34700670_34704152_34704502_34709949_34710138_34710604_34710715_34711716_34711858_34713007_34713119_34713200_34713300_34713386_34713537_34714156_34714355_34716189_34716367_34721551_34721727_34724314
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021087	chr11	-	2144	15	FSM	ENSMUSG00000018848.5	ENSMUST00000018992.4	2109	15	-34	-1	-34	1	multi-exon	FALSE	canonical	3	825	junction_11	73.3093807511866	1029	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGGTGTGTTTCTTTGTC	NA	False	NA	0	True	AGTAAA	-18	NA	35725367	35699206	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716813_35716936_35717303_35717405_35718184_35718294_35719451_35719641_35723998_35724134_35725263
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021099	chr11	-	4502	23	NNC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_16	56.5216991901238	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTTGTCATTTGTCCCT	8117	False	NA	NA	False	AATAAA	-19	NA	35871354	35729225	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780116_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021124	chr11	-	1835	7	FSM	ENSMUSG00000042032.14	ENSMUST00000040167.11	1949	7	116	-2	-30	2	multi-exon	FALSE	canonical	3	244	junction_6	119.767367100652	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGCTTTATTTTGTATT	NA	False	NA	-10	True	AATAAA	-20	NA	40583485	40570138	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40583304
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021139	chr11	+	203	1	Intergenic	novelGene_674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTAGTCAAGCCGGGAGT	NA	False	NA	NA	False	AATAAA	-14	NA	40586205	40586408	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_40586200_40586400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021146	chr11	-	3937	18	FSM	ENSMUSG00000020330.17	ENSMUST00000020579.9	3892	18	-36	-9	-36	9	multi-exon	TRUE	canonical	3	534	junction_10	59.4855104336938	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGATTAATTTTTATTT	NA	False	NA	1	True	AATAAA	-26	NA	40624285	40592212	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021182	chr11	-	3489	6	FSM	ENSMUSG00000020326.8	ENSMUST00000020576.8	3512	6	23	0	23	0	multi-exon	FALSE	canonical	3	618	junction_3	51.9422756528822	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCTTGTTTTGGTTTCT	NA	False	NA	-5	True	AATAAA	-16	NA	40646115	40639378	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_40641887_40642087_40642187_40642266_40642346_40642930_40643185_40644634_40644896_40645827
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021189	chr11	+	185	1	Intergenic	novelGene_675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCATGTCAAACCTCTTTC	NA	False	NA	NA	False	NA	NA	NA	40748593	40748778	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_40748600_40748800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021195	chr11	+	149	1	Intergenic	novelGene_676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATAGCTGGGAATATAAG	NA	False	NA	NA	False	NA	NA	NA	41556541	41556690	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_41556500_41556700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021200	chr11	-	747	6	FSM	ENSMUSG00000020415.17	ENSMUST00000020687.15	741	6	0	-6	0	6	multi-exon	FALSE	canonical	3	2427	junction_5	2882.94754721622	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGATTGGTATTTTTTG	NA	False	NA	-6	True	AATAAA	-40	NA	43317078	43311070	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_43311236_43311933_43312093_43313719_43313814_43315545_43315725_43316409_43316509_43317027
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021219	chr11	-	1378	4	FSM	ENSMUSG00000020415.17	ENSMUST00000117446.8	1674	4	299	-3	281	3	multi-exon	FALSE	canonical	3	9157	junction_2	511.130337802622	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAATACTTAACCAACCC	NA	False	NA	-23	True	AATAAA	-23	NA	43316509	43311087	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_43312093_43313719_43313814_43315545_43315725_43316409
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021225	chr11	-	698	6	FSM	ENSMUSG00000020415.17	ENSMUST00000118368.8	696	6	4	-6	0	-2	multi-exon	FALSE	canonical	3	206	junction_5	3753.79296179211	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATTGTGAATACTTAAC	NA	False	NA	-29	True	AATAAA	-17	NA	43317040	43311093	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_43311236_43311933_43312093_43313719_43313814_43315545_43315725_43316409_43316509_43317015
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021229	chr11	-	750	5	NIC	ENSMUSG00000020415.17	novel	948	5	NA	NA	281	-1	combination_of_known_junctions	FALSE	canonical	3	326	junction_1	4118.28200679604	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAGATTGTGAATACTT	NA	False	NA	-32	True	AATAAA	-14	NA	43316509	43311096	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_43311236_43311854_43312093_43313719_43313814_43315545_43315725_43316409
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021238	chr11	+	2711	16	FSM	ENSMUSG00000020409.11	ENSMUST00000020681.10	3625	16	-32	946	-17	-946	multi-exon	FALSE	canonical	3	184	junction_1	28.1705914425349	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGGATTTTCGTACACTT	NA	False	NA	14	True	AATAAA	-25	NA	43324553	43337862	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_43324647_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021241	chr11	+	2789	17	NIC	ENSMUSG00000020409.11	novel	3625	16	NA	NA	-16	-946	combination_of_known_junctions	FALSE	canonical	3	72	junction_1	62.6749738232893	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGGATTTTCGTACACTT	NA	False	NA	14	True	AATAAA	-25	NA	43324554	43337862	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_43324647_43327180_43327260_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021255	chr11	+	190	1	Intergenic	novelGene_677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCAATTTTGGTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	43356979	43357169	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_43357000_43357200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021266	chr11	+	184	1	Intergenic	novelGene_678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTATTTACTTTTTATG	NA	False	NA	NA	False	NA	NA	NA	43560669	43560853	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_43560700_43560900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021274	chr11	+	3225	2	FSM	ENSMUSG00000044950.8	ENSMUST00000061070.6	3277	2	55	-3	-5	3	multi-exon	FALSE	canonical	3	104	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGTGTGTTTCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	43572879	43598021	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_43573444_43595360
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021282	chr11	+	200	1	Intergenic	novelGene_679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTCTGAGCCATCTCTT	3181	False	NA	NA	False	NA	NA	NA	43601859	43602059	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_43601900_43602100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021288	chr11	+	188	1	Intergenic	novelGene_680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCAGCAGTGTGATCTTA	5138	False	NA	NA	False	NA	NA	NA	43603816	43604004	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_43603800_43604000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021293	chr11	-	1970	8	FSM	ENSMUSG00000041278.11	ENSMUST00000048578.3	1438	8	-31	-501	-5	4	multi-exon	FALSE	canonical	3	649	junction_5	59.12318513416	231	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTGTACAACTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	43638840	43620334	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_43621435_43627245_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911_43636275_43638748
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021307	chr11	-	2101	11	FSM	ENSMUSG00000041231.16	ENSMUST00000102795.4	2088	11	-10	-3	-10	3	multi-exon	FALSE	canonical	2	61	junction_9	50.7897627480184	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGTTTTATAATGTC	NA	False	NA	NA	False	AATAAA	-21	NA	44361335	44345394	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_44346443_44347190_44347319_44349031_44349149_44351547_44351647_44352145_44352184_44354484_44354584_44356191_44356308_44356384_44356471_44356822_44356915_44357641_44357839_44361254
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021317	chr11	+	166	1	Intergenic	novelGene_681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACTATTAAATGTGGCC	NA	False	NA	NA	False	NA	NA	NA	44355700	44355866	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_44355700_44355900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021323	chr11	+	3579	11	FSM	ENSMUSG00000019189.14	ENSMUST00000019333.10	3570	11	-9	0	-9	0	multi-exon	TRUE	canonical	3	286	junction_6	37.2538588605261	278	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTGTATTCCTGTGATGT	9718	False	NA	12	True	AATAAA	-18	NA	44409781	44456347	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_44410102_44415754_44415971_44422102_44422212_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021344	chr11	-	183	1	Intergenic	novelGene_682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAGAAAGAAAAGT	NA	False	NA	NA	False	NA	NA	NA	44639135	44638952	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_44639000_44639100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021348	chr11	+	3438	12	FSM	ENSMUSG00000006169.21	ENSMUST00000109260.3	3398	12	-40	0	-40	0	multi-exon	FALSE	canonical	3	378	junction_6	52.2164914894813	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGCCCGCCTCTTTTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	45742750	45801452	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798720_45798872_45799767
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021358	chr11	+	3477	12	FSM	ENSMUSG00000006169.21	ENSMUST00000109261.11	3452	12	-24	-1	-24	1	multi-exon	FALSE	canonical	3	124	junction_10	116.535881042055	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGCCCGCCTCTTTTCTC	NA	False	NA	NA	False	ATTAAA	-19	NA	45742766	45801453	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798666_45798872_45799767
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021373	chr11	+	198	1	Intergenic	novelGene_683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATGCCTGCCCTCCCTCC	NA	False	NA	NA	False	NA	NA	NA	45768723	45768921	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_45768700_45768900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021386	chr11	-	1236	6	FSM	ENSMUSG00000011254.17	ENSMUST00000011398.13	2250	6	-5	1019	-5	-1019	multi-exon	FALSE	canonical	3	110	junction_3	12.8	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGGAGTCATTTTTAGC	6296	False	NA	0	True	TATAAA	-19	NA	45846326	45838688	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_45839156_45841022_45841131_45842369_45842459_45843561_45843732_45844882_45845060_45846101
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021426	chr11	-	172	1	Intergenic	novelGene_684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTTAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	46300004	46299832	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_46299800_46300000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021460	chr11	+	264	1	Intergenic	novelGene_685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAAGAAACCTGGCC	NA	False	NA	NA	False	ATTAAA	-42	NA	48664787	48665051	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_48664800_48665100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021469	chr11	+	192	1	Intergenic	novelGene_686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGCAACCTAGGTCCTC	NA	False	NA	NA	False	NA	NA	NA	48684495	48684687	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_48684500_48684700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021491	chr11	+	1685	7	ISM	ENSMUSG00000020372.16	ENSMUST00000020640.8	1447	8	506	346	492	0	3prime_fragment	FALSE	canonical	1	1907	junction_1	1751.95706441555	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTCTATATGTGAGTC	NA	False	NA	23	True	AATAAA	-15	NA	48691692	48696915	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_+_48692662_48693099_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021503	chr11	-	198	1	ISM	ENSMUSG00000046879.8	ENSMUST00000049519.4	2259	3	5836	96	5836	-92	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAAAATTAGAAATTTT	NA	False	NA	NA	False	NA	NA	NA	48756365	48756167	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_-_48756200_48756400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021520	chr11	+	3656	3	FSM	ENSMUSG00000020346.17	ENSMUST00000156607.8	633	3	-687	-2336	-23	0	multi-exon	TRUE	canonical	3	30	junction_1	30.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTGTGTGTGTGTCCT	NA	False	NA	NA	False	AATAAA	-24	NA	49135370	49153854	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_49136445_49142376_49142502_49151397
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021525	chr11	+	2596	2	ISM	ENSMUSG00000020346.17	ENSMUST00000081794.7	2976	3	1233	0	248	0	3prime_fragment	FALSE	canonical	3	29	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTGTGTGTGTGTCCT	NA	False	NA	NA	False	AATAAA	-24	NA	49136305	49153854	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_+_49136445_49151397
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021534	chr11	+	2689	3	FSM	ENSMUSG00000020346.17	ENSMUST00000101293.11	2729	3	37	3	-16	0	multi-exon	FALSE	canonical	3	40	junction_1	25.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTGTGTGTGTGTCCT	NA	False	NA	NA	False	AATAAA	-24	NA	49141375	49153854	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_49141483_49142376_49142502_49151397
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021544	chr11	+	92	1	Intergenic	novelGene_687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTGCCTTAGCTCCGT	NA	False	NA	NA	False	NA	NA	NA	49343280	49343372	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_49343300_49343400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021566	chr11	+	193	1	Intergenic	novelGene_688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGTAAAAAAAGATTTATT	NA	False	NA	NA	False	NA	NA	NA	49576389	49576582	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_49576400_49576600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021572	chr11	+	3021	19	FSM	ENSMUSG00000020363.7	ENSMUST00000020629.5	2947	19	-66	-8	-57	8	multi-exon	FALSE	canonical	2	320	junction_10	53.5808204583287	517	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTGAATTTAGTTAAC	NA	False	NA	35	True	AATAAA	-25	NA	49684947	49729448	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_49685071_49695778_49695887_49698521_49698621_49699860_49699987_49701790_49701850_49702496_49702632_49706106_49706169_49709406_49709487_49709963_49710082_49714038_49714203_49714560_49714657_49714767_49714866_49715158_49715280_49717570_49717729_49717957_49718073_49720566_49720695_49723687_49723856_49726438_49726601_49728547
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021609	chr11	+	1871	9	FSM	ENSMUSG00000020376.18	ENSMUST00000102776.5	1502	9	-369	0	-367	0	multi-exon	FALSE	canonical	3	193	junction_8	44.3931300991494	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCGCCAGCGTGTGTTT	NA	False	NA	24	True	NA	NA	NA	49915805	49995580	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_49916475_49943602_49943798_49961997_49962249_49976567_49976640_49978205_49978289_49984549_49984647_49986602_49986808_49990072_49990167_49995375
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021647	chr11	+	193	1	Intergenic	novelGene_689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAGAAGCAGTGGACAG	NA	False	NA	NA	False	NA	NA	NA	50037634	50037827	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_50037600_50037800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021665	chr11	-	2006	8	FSM	ENSMUSG00000015837.16	ENSMUST00000102774.11	2037	8	31	0	-5	0	multi-exon	TRUE	canonical	0	0	junction_1	263.494104027287	271	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGTGATCCGTACGAGT	NA	False	NA	-14	True	AATAAA	-22	NA	50101623	50090978	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_50091775_50093225_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021679	chr11	+	181	1	Intergenic	novelGene_690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAGGGGAGGGGGGCT	NA	False	NA	NA	False	NA	NA	NA	50104929	50105110	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_50104900_50105100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021683	chr11	+	2445	15	FSM	ENSMUSG00000036620.15	ENSMUST00000041725.14	2429	15	-14	-2	-14	2	multi-exon	TRUE	canonical	3	193	junction_14	11.6647471695966	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCTCATAGGTGAATGT	NA	False	NA	15	True	AATAAA	-15	NA	50116147	50125932	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_50116567_50121506_50121693_50121787_50121929_50122017_50122152_50122565_50122613_50122850_50122965_50123133_50123210_50123390_50123506_50123771_50123903_50124102_50124211_50124290_50124485_50124909_50124989_50125070_50125159_50125236_50125350_50125432
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021707	chr11	-	4292	15	FSM	ENSMUSG00000020368.16	ENSMUST00000020637.9	3779	15	-3	-510	-3	4	multi-exon	FALSE	canonical	3	3893	junction_7	208.647160908319	4064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAATGTTTTTACTGTT	8133	False	NA	1	True	ATTAAA	-27	NA	50216503	50184783	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021717	chr11	-	3754	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_2	1089.57002378677	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTCTGCAGGTTTCTC	8158	False	NA	-54	True	AATAAA	-22	NA	50216478	50185293	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_50187163_50187884_50187962_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021718	chr11	-	3763	15	FSM	ENSMUSG00000020368.16	ENSMUST00000179865.8	4281	15	12	506	12	0	multi-exon	FALSE	canonical	3	497	junction_14	977.081357713797	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTCTGCAGGTTTCTC	8148	False	NA	-54	True	AATAAA	-22	NA	50216488	50185293	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202608_50216319
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021719	chr11	-	3738	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	418	junction_14	996.986871241829	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTCTGCAGGTTTCTC	8141	False	NA	-54	True	AATAAA	-22	NA	50216495	50185293	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216355
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021756	chr11	+	220	1	Intergenic	novelGene_691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACGGGGTCTGGAGAGATG	4159	False	NA	NA	False	NA	NA	NA	50207122	50207342	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_50207100_50207300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021762	chr11	-	174	1	Intergenic	novelGene_692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTTTTGTTTTT	5560	False	NA	NA	False	NA	NA	NA	50219076	50218902	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_50218900_50219100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021769	chr11	+	2239	14	FSM	ENSMUSG00000007850.17	ENSMUST00000069304.14	2225	14	-13	-1	-13	0	multi-exon	TRUE	canonical	3	130	junction_1	115.462537790991	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	50268532	50277355	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021796	chr11	-	2688	18	FSM	ENSMUSG00000020375.10	ENSMUST00000020643.4	2688	18	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_10	7.873128931343	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGGCCTCCAGCTTGCT	4149	False	NA	0	True	AATAAA	-32	NA	50321952	50280112	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_50280786_50281120_50281199_50282845_50282895_50285747_50285843_50288470_50288601_50289197_50289318_50292264_50292363_50295280_50295449_50297193_50297311_50298649_50298752_50301392_50301463_50305343_50305410_50307066_50307129_50308010_50308135_50310447_50310550_50311203_50311322_50312456_50312631_50321610
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021806	chr11	+	213	1	Intergenic	novelGene_693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTTTGGAGAAAGAGAAG	NA	False	NA	NA	False	TTTAAA	-2	NA	50286946	50287159	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_50286900_50287200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021809	chr11	-	5364	5	FSM	ENSMUSG00000044807.14	ENSMUST00000109135.9	5325	5	-34	-5	0	5	multi-exon	FALSE	canonical	3	17	junction_4	5.87367006223537	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGGTGAATGTGAGCT	296	False	NA	NA	False	AATAAA	-22	NA	50718551	50701907	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_50706821_50707945_50708039_50708635_50708763_50717252_50717338_50718405
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021821	chr11	-	3086	6	NNC	ENSMUSG00000049321.18	novel	3069	6	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_5	17.9710878913882	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATT	NA	False	NA	0	True	NA	NA	NA	50806987	50789538	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_50792119_50796916_50796985_50801262_50801353_50801532_50801704_50803106_50803232_50806935
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021879	chr11	-	1598	7	NNC	ENSMUSG00000020358.18	novel	2370	7	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_6	1144.51003587659	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCTGGGTAAATGTGGG	NA	False	NA	-20	True	AATAAA	-19	NA	51497677	51491698	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497411_51497493
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021888	chr11	-	1732	8	NNC	ENSMUSG00000020358.18	novel	1437	8	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_7	1096.78826114976	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCAAGCCTGGGTAAATG	NA	False	NA	-24	True	AATAAA	-15	NA	51497674	51491702	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_51492306_51492576_51492718_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497411_51497493
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021904	chr11	+	769	4	FSM	ENSMUSG00000001056.4	ENSMUST00000127405.2	1042	4	0	273	0	12	multi-exon	FALSE	canonical	3	5273	junction_1	70.8723421998235	523	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGGTGTTCTTGAAG	NA	False	NA	28	True	AGTAAA	-23	NA	51510561	51514268	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_51510805_51510908_51510979_51513311_51513418_51513918
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021914	chr11	-	1940	10	FSM	ENSMUSG00000001054.10	ENSMUST00000001081.10	1946	10	14	-8	14	6	multi-exon	FALSE	canonical	3	245	junction_3	13.1581078605222	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATGGTCTTGTGTGTAT	NA	False	NA	-1	True	AATATA	-27	NA	51526709	51514491	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_51514974_51515055_51515211_51515301_51515405_51516495_51516662_51517562_51517730_51517825_51517927_51518448_51518590_51518706_51518853_51520302_51520489_51526416
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021936	chr11	-	841	2	FSM	ENSMUSG00000007777.10	ENSMUST00000007921.9	813	2	-16	-12	-16	12	multi-exon	FALSE	canonical	3	574	junction_1	0	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGCTTTTCCTGCATAC	5168	False	NA	0	True	ATTAAA	-26	NA	51579496	51576200	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_51576920_51579374
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021973	chr11	+	1862	3	FSM	ENSMUSG00000020392.9	ENSMUST00000102763.5	1832	3	-24	-6	-24	6	multi-exon	FALSE	canonical	3	1066	junction_1	20	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCAAGTTGTGTGATTTC	NA	False	NA	NA	False	AATAAA	-26	NA	51858463	51868167	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_51858785_51860970_51861071_51866726
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000021995	chr11	+	219	1	Intergenic	novelGene_694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACTGAGAGCTATAGAAG	NA	False	NA	NA	False	NA	NA	NA	51981845	51982064	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_51981800_51982100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022011	chr11	+	191	1	Intergenic	novelGene_695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCTGAGTATCGAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	52071796	52071987	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_52071800_52072000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022018	chr11	+	1445	6	FSM	ENSMUSG00000036309.15	ENSMUST00000037324.12	1440	6	-18	13	-4	-13	multi-exon	FALSE	canonical	3	4483	junction_4	346.23483360286	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTGTGGATGTAAATGT	393	False	NA	21	True	AATAAA	-28	NA	52122817	52137672	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_52122946_52127663_52127761_52133413_52133488_52134441_52134586_52135807_52135949_52136811
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022024	chr11	+	1084	5	NIC	ENSMUSG00000036309.15	novel	1440	6	NA	NA	0	-184	combination_of_known_junctions	FALSE	canonical	3	64	junction_3	2227.98401026578	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTATGTCATCTTTTTA	439	False	NA	14	True	ATTAAA	-17	NA	52122863	52137501	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_52122946_52127663_52127761_52133413_52133488_52135807_52135949_52136811
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022026	chr11	+	1317	7	NIC	ENSMUSG00000036309.15	novel	1440	6	NA	NA	0	-184	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	2365.51336335735	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTATGTCATCTTTTTA	439	False	NA	14	True	ATTAAA	-17	NA	52122863	52137501	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_52122946_52127663_52127761_52128210_52128300_52133413_52133488_52134441_52134586_52135807_52135949_52136811
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022036	chr11	-	3049	11	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-57	88	at_least_one_novel_splicesite	FALSE	canonical	3	108	junction_1	46.9302674187991	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGAGTAGCTGTTTGAG	NA	False	NA	-1	True	AATAAA	-29	NA	52174215	52143109	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_52144790_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022040	chr11	-	2975	10	NIC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-56	88	combination_of_known_splicesites	FALSE	canonical	3	51	junction_1	63.2314970740233	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGAGTAGCTGTTTGAG	NA	False	NA	-1	True	AATAAA	-29	NA	52174214	52143109	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_52144790_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022074	chr11	+	191	1	Intergenic	novelGene_696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGGCGGACAGTGGTGGC	NA	False	NA	NA	False	NA	NA	NA	52179529	52179720	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_52179500_52179700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022094	chr11	+	917	1	ISM	ENSMUSG00000020402.12	ENSMUST00000102758.8	2022	9	27621	0	1284	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTTGTTGTTTTTGTTA	3671	False	NA	30	True	AATAAA	-26	NA	52279307	52280224	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_+_52279300_52280200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022103	chr11	+	190	1	Intergenic	novelGene_697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAAAGTGGTTTCCCTG	988	False	NA	NA	False	NA	NA	NA	52283684	52283874	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_52283700_52283900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022109	chr11	+	2478	3	FSM	ENSMUSG00000036275.14	ENSMUST00000109057.8	2472	3	-2	-4	-2	4	multi-exon	FALSE	canonical	3	140	junction_1	2	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTAGTGTGTTCTTT	4556	False	NA	NA	False	AATAAA	-20	NA	52287252	52299559	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_52287431_52293872_52294385_52297771
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022118	chr11	-	185	1	Intergenic	novelGene_698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAAAAAGGGAGGG	3290	False	NA	NA	False	NA	NA	NA	52332796	52332611	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_52332600_52332800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022132	chr11	-	2949	19	FSM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	-76	1745	-76	1321	multi-exon	FALSE	canonical	3	1487	junction_13	205.703280251368	618	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTCTGAATATCAACT	NA	False	NA	-29	True	ATTAAA	-31	NA	53191360	53152385	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022144	chr11	+	2660	1	Antisense	novelGene_ENSMUSG00000020361.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCCTCAGGCTAATTTT	NA	False	NA	NA	False	NA	NA	NA	53172586	53175246	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr11_+_53172600_53175200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022156	chr11	+	179	1	Intergenic	novelGene_699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCCAAGTGATGTCACAGC	8508	False	NA	NA	False	NA	NA	NA	53209168	53209347	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_53209200_53209300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022172	chr11	-	190	1	Intergenic	novelGene_700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTTTTTCCATTCCAA	NA	False	NA	NA	False	NA	NA	NA	53217792	53217602	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_53217600_53217800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022180	chr11	-	224	1	Intergenic	novelGene_701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAGATTGAGTTTAATCT	NA	False	NA	NA	False	TTTAAA	-1	NA	53229128	53228904	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_53228900_53229100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022188	chr11	+	241	1	Intergenic	novelGene_702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATGAATCACTAACTTGA	NA	False	NA	NA	False	NA	NA	NA	53238564	53238805	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_53238600_53238800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022197	chr11	-	245	1	Intergenic	novelGene_703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAGGCACTACAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	53244519	53244274	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_53244300_53244500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022206	chr11	-	195	1	Intergenic	novelGene_704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACAGGTTGCACACTTCC	7979	False	NA	NA	False	NA	NA	NA	53247655	53247460	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_53247500_53247700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022213	chr11	-	504	2	FSM	ENSMUSG00000044894.15	ENSMUST00000061326.5	1521	2	-6	1023	-2	8	multi-exon	FALSE	canonical	3	5710	junction_1	0	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTGCTTAGTTTGAG	2941	False	NA	0	True	AATAAA	-25	NA	53321660	53319771	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_53319978_53321362
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022218	chr11	-	416	3	FSM	ENSMUSG00000044894.15	ENSMUST00000109021.4	405	3	-6	-5	-2	5	multi-exon	FALSE	canonical	3	885	junction_2	2412.5	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGTGTGCTTAGTTT	2941	False	NA	-3	True	AATAAA	-22	NA	53321660	53319774	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_53319978_53321362_53321530_53321614
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022273	chr11	+	137	1	Genic_Genomic	ENSMUSG00000018395.20	novel	NA	NA	NA	NA	7916	35	mono-exon	FALSE	NA	NA	NA	NA	NA	254	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACCAGTCTCATTTTTC	NA	False	NA	NA	False	NA	NA	NA	53492692	53492829	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr11_+_53492700_53492800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022291	chr11	+	201	1	Intergenic	novelGene_705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCTTTATATGTTTAAAAA	1645	False	NA	NA	False	NA	NA	NA	53569039	53569240	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_53569000_53569200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022297	chr11	-	282	1	Intergenic	novelGene_706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACCTTTTTTTAATACCT	NA	False	NA	NA	False	NA	NA	NA	53572296	53572014	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_53572000_53572300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022304	chr11	-	176	1	Intergenic	novelGene_707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAAAACAGTCT	8417	False	NA	NA	False	NA	NA	NA	53610246	53610070	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_53610100_53610200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022308	chr11	+	200	1	Intergenic	novelGene_708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAGAAGAGATCAGCTTAC	NA	False	NA	NA	False	NA	NA	NA	53646348	53646548	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_53646300_53646500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022314	chr11	+	198	1	Intergenic	novelGene_709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAACCTGGGTTACATGA	NA	False	NA	NA	False	NA	NA	NA	53657171	53657369	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_53657200_53657400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022320	chr11	+	2161	10	FSM	ENSMUSG00000018899.18	ENSMUST00000108920.10	2136	10	-24	-1	-24	1	multi-exon	FALSE	canonical	3	46	junction_1	9.82940913537621	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGTGGCTTTTTATTTAG	NA	False	NA	11	True	TATAAA	-18	NA	53660816	53668150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_53661105_53662109_53662202_53663664_53663765_53664481_53664659_53664751_53664802_53664887_53665021_53665171_53665295_53665879_53665930_53666743_53666880_53667138
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022330	chr11	+	354	1	Intergenic	novelGene_710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATAAACAAAGTCTGGGG	NA	False	NA	NA	False	NA	NA	NA	53752059	53752413	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_53752100_53752400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022341	chr11	+	246	1	Intergenic	novelGene_711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTGATAAAGACCACCTT	NA	False	NA	NA	False	NA	NA	NA	53825094	53825340	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_53825100_53825300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022349	chr11	-	1192	7	FSM	ENSMUSG00000020388.13	ENSMUST00000018755.10	1182	7	-7	-3	-7	3	multi-exon	FALSE	canonical	3	190	junction_5	18.9245578254523	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGTGTCTGGCCTGATAA	NA	False	NA	1	True	AATAAA	-25	NA	53959847	53945750	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_53946066_53946182_53946301_53946615_53946780_53946968_53947151_53950763_53950843_53954460_53954613_53959665
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022391	chr11	+	6279	18	FSM	ENSMUSG00000035992.16	ENSMUST00000046835.14	6255	18	-23	-1	-23	1	multi-exon	TRUE	canonical	3	95	junction_9	15.4083965785252	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAATGTTTGTGTTTCT	1953	False	NA	28	True	AATAAA	-18	NA	54329001	54409062	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_54329215_54356912_54357040_54366457_54366593_54371075_54371177_54371435_54371511_54373320_54373413_54378537_54378622_54380094_54380167_54381628_54381765_54384018_54384221_54387427_54387514_54390236_54390384_54391345_54391516_54393084_54394502_54395563_54395733_54400707_54400906_54404195_54404312_54406323
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022399	chr11	+	8148	28	FSM	ENSMUSG00000037533.21	ENSMUST00000102743.10	8189	28	42	-1	0	1	multi-exon	FALSE	canonical	3	58	junction_8	12.2166092610894	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGCTTCCTTCCCAA	NA	False	NA	14	True	AATAAA	-15	NA	54413714	54590112	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54585095_54585399_54586905
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022425	chr11	+	244	1	Intergenic	novelGene_712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	650	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTTGATCCCATCCCCT	NA	False	NA	NA	False	NA	NA	NA	54689589	54689833	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_54689600_54689800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022444	chr11	+	201	1	Intergenic	novelGene_713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTACAGTTGGGGGCTG	NA	False	NA	NA	False	NA	NA	NA	54734777	54734978	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_54734800_54735000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022446	chr11	+	170	1	Intergenic	novelGene_714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAGAAGCTACAGTTCA	NA	False	NA	NA	False	NA	NA	NA	54734990	54735160	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_54735000_54735200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022451	chr11	-	176	1	Intergenic	novelGene_715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATCCATATTTCTATCA	NA	False	NA	NA	False	NA	NA	NA	54749639	54749463	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_54749500_54749600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022457	chr11	+	641	3	FSM	ENSMUSG00000020267.7	ENSMUST00000020504.6	636	3	-5	0	-5	0	multi-exon	FALSE	canonical	3	4351	junction_2	227.5	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATTTGTTACTCTGGAA	NA	False	NA	34	True	AATAAA	-23	NA	54757203	54761327	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_54757427_54760673_54760779_54761014
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022471	chr11	+	184	1	Intergenic	novelGene_716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTGTTGTCATTTATA	NA	False	NA	NA	False	NA	NA	NA	54770024	54770208	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_54770000_54770200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022479	chr11	+	1440	5	FSM	ENSMUSG00000018339.13	ENSMUST00000082430.11	1594	5	154	0	0	0	multi-exon	FALSE	canonical	3	86	junction_4	9.98436277385793	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAGCCTACTTGGAATTT	NA	False	NA	9	True	AGTAAA	-16	NA	54793751	54801203	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_54793879_54797952_54798107_54799366_54799485_54799865_54799966_54800262
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022494	chr11	-	2566	17	NIC	ENSMUSG00000020400.18	novel	2973	19	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_16	54.30350903717	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGACTGGCTAATT	3602	False	NA	-5	True	CATAAA	-18	NA	54846928	54801612	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54846846
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022509	chr11	-	2640	17	NIC	ENSMUSG00000020400.18	novel	2973	19	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_16	64.3996312101242	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGACTGGCTAATT	3602	False	NA	-5	True	CATAAA	-18	NA	54846928	54801612	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54846846
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022514	chr11	-	2812	18	FSM	ENSMUSG00000020400.18	ENSMUST00000108889.10	2834	18	20	2	2	0	multi-exon	FALSE	canonical	3	102	junction_1	53.1161161918674	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGACTGGCTAATT	3602	False	NA	-5	True	CATAAA	-18	NA	54846928	54801612	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54846846
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022533	chr11	-	2503	26	FSM	ENSMUSG00000018340.14	ENSMUST00000108883.10	2489	26	-14	0	-14	0	multi-exon	FALSE	canonical	3	343	junction_6	73.4786608478952	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGATGTGTGTGCTTTA	NA	False	NA	-4	True	NA	NA	NA	54924285	54869933	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54877876_54877895_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022543	chr11	+	180	1	Intergenic	novelGene_717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAGGCTGGAGTGATGC	6975	False	NA	NA	False	NA	NA	NA	54873411	54873591	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_54873400_54873600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022556	chr11	+	2058	4	FSM	ENSMUSG00000000594.8	ENSMUST00000000608.8	4127	4	-61	2130	-61	-2130	multi-exon	FALSE	canonical	3	325	junction_3	15.195028426722	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGGCTCCTTTTCTTGG	NA	False	NA	23	True	AATAAA	-16	NA	54988879	55001725	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_54989071_54994412_54994575_54999723_54999907_55000203
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022565	chr11	+	5235	12	NNC	ENSMUSG00000020261.16	novel	1950	12	NA	NA	-8	2	intron_retention	TRUE	canonical	0	0	junction_11	18.7880742902829	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGCAAACTGTGTCTTTG	NA	False	NA	26	True	AATAAA	-26	NA	55095167	55127158	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_+_55095315_55104755_55104901_55109833_55109925_55110405_55110495_55111201_55111298_55112822_55112908_55114424_55114644_55115780_55115880_55116791_55116959_55119012_55119183_55123192_55127000_55127038
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022576	chr11	-	2164	10	FSM	ENSMUSG00000018593.14	ENSMUST00000018737.13	2300	10	137	-1	-43	1	multi-exon	FALSE	canonical	3	577	junction_9	66.8521493786341	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCCCGGGTGATGGT	3813	False	NA	-1	True	AATAAA	-23	NA	55310769	55285324	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022592	chr11	-	2143	10	FSM	ENSMUSG00000018593.14	ENSMUST00000108858.8	2115	10	-28	0	-26	0	multi-exon	FALSE	canonical	3	134	junction_8	195.999685058956	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	3830	False	NA	-2	True	AATAAA	-22	NA	55310752	55285325	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298103_55300753_55300824_55310613
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022593	chr11	-	2186	10	FSM	ENSMUSG00000018593.14	ENSMUST00000214685.2	1269	10	4	-921	4	0	multi-exon	FALSE	canonical	3	36	junction_9	224.039568815559	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	577	False	NA	-2	True	AATAAA	-22	NA	55314005	55285325	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55313826
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022611	chr11	+	132	1	Intergenic	novelGene_718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGAAAGTTTAAGAGATAT	NA	False	NA	NA	False	AATAAA	-19	NA	55322307	55322439	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_55322300_55322400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022616	chr11	-	500	4	FSM	ENSMUSG00000018585.10	ENSMUST00000108857.2	541	4	45	-4	3	4	multi-exon	FALSE	canonical	3	2715	junction_3	136.123310110927	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGGTGTATGTTCTCG	NA	False	NA	-3	True	AATAAA	-24	NA	55352020	55337462	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_55337611_55341282_55341452_55345706_55345783_55351913
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022626	chr11	+	2810	12	FSM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	-49	3942	-49	-3942	multi-exon	TRUE	canonical	3	6361	junction_7	586.595613027527	1538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGACTGCTAAAACTCAC	NA	False	NA	30	True	ATTAAA	-31	NA	55360461	55391722	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022636	chr11	+	2617	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-3955	combination_of_known_splicesites	FALSE	canonical	3	262	junction_2	2165.33416358769	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATCTGGCAATGTAGAC	NA	False	NA	17	True	ATTAAA	-18	NA	55360559	55391709	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_55360628_55376451_55376565_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022638	chr11	+	4412	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-3953	intron_retention	FALSE	canonical	3	6361	junction_6	598.042047016763	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTGGCAATGTAGACTG	NA	False	NA	19	True	ATTAAA	-20	NA	55360559	55391711	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022639	chr11	+	4439	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-3955	intron_retention	FALSE	canonical	3	6361	junction_6	596.652528696561	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATCTGGCAATGTAGAC	NA	False	NA	17	True	ATTAAA	-18	NA	55360559	55391709	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_55360628_55376451_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022650	chr11	+	2586	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-3955	combination_of_known_splicesites	FALSE	canonical	3	121	junction_1	2170.29634842802	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATCTGGCAATGTAGAC	NA	False	NA	17	True	ATTAAA	-18	NA	55360559	55391709	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_55360628_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022667	chr11	+	2540	12	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-4475	combination_of_known_junctions	FALSE	canonical	3	48	junction_2	2123.77658316656	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55360559	55391189	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_55360628_55376451_55376565_55377943_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022680	chr11	-	181	1	Intergenic	novelGene_719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	NA	False	NA	NA	False	NA	NA	NA	55366438	55366257	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_55366300_55366400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022686	chr11	+	192	1	Intergenic	novelGene_720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	481	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCTATCTGCTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	55374211	55374403	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_55374200_55374400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022703	chr11	-	2577	14	FSM	ENSMUSG00000020523.15	ENSMUST00000020831.13	2557	14	-20	0	-20	0	multi-exon	TRUE	canonical	3	63	junction_13	118.75144346678	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCGTGGTATTTAATAGC	NA	False	NA	NA	False	AATAAA	-21	NA	57409463	57373818	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405115_57409398
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022706	chr11	-	2471	14	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_12	132.513346430646	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCGTGGTATTTAATAGC	NA	False	NA	NA	False	AATAAA	-21	NA	57409464	57373818	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57405030_57405118_57409398
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022710	chr11	-	2581	14	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	3	272	junction_13	66.0623696698092	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCGTGGTATTTAATAGC	NA	False	NA	NA	False	AATAAA	-21	NA	57409464	57373818	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405118_57409398
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022745	chr11	+	4837	3	FSM	ENSMUSG00000020522.14	ENSMUST00000020830.14	4839	3	-1	3	0	-3	multi-exon	FALSE	canonical	3	62	junction_1	12.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAGTTGAATGATGTAT	NA	False	NA	15	True	AATAAA	-16	NA	57409511	57424637	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_57409575_57418684_57419116_57420294
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022748	chr11	+	4800	3	FSM	ENSMUSG00000020522.14	ENSMUST00000108849.8	4827	3	23	4	0	-3	multi-exon	FALSE	canonical	3	17	junction_1	35	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAGTTGAATGATGTAT	NA	False	NA	15	True	AATAAA	-16	NA	57409512	57424637	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_57409539_57418684_57419116_57420294
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022755	chr11	+	5201	2	Intergenic	novelGene_721	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	1950	junction_1	0	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAGCTGGGTAAGGGGGT	NA	False	NA	NA	False	NA	NA	NA	57445628	57450923	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_57450386_57450479
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022766	chr11	-	1316	3	Intergenic	novelGene_722	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	81	junction_1	23.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTTCTCGTTGGTGATT	NA	False	NA	NA	False	NA	NA	NA	57450922	57445630	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_57446486_57448541_57448776_57450695
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022776	chr11	+	5246	2	Intergenic	novelGene_723	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	822	junction_1	0	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAGCTGGGTAAGGGGGT	NA	False	NA	NA	False	NA	NA	NA	57445630	57450923	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_57450433_57450479
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022789	chr11	-	3232	2	Intergenic	novelGene_724	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	81	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	57450920	57445632	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_57446486_57448541
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022790	chr11	-	4438	2	Intergenic	novelGene_725	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	57450921	57445632	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_57446486_57447336
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022813	chr11	+	4702	12	FSM	ENSMUSG00000020520.15	ENSMUST00000066987.14	4715	12	0	13	0	-13	multi-exon	TRUE	canonical	3	24	junction_9	7.98034776267445	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTCTGGCATGTCCCT	NA	False	NA	NA	False	AATAAA	-20	NA	57536267	57678327	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_57536544_57612120_57612224_57616348_57616488_57627803_57627971_57656385_57656572_57660317_57660502_57662293_57662412_57668456_57668565_57671875_57672098_57673031_57673149_57674515_57674666_57675395
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022823	chr11	+	192	1	Intergenic	novelGene_726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAAGAAAATGTTCT	3211	False	NA	NA	False	NA	NA	NA	57652780	57652972	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_57652800_57653000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022834	chr11	+	1196	4	FSM	ENSMUSG00000020519.6	ENSMUST00000020826.6	1151	4	-45	0	-45	0	multi-exon	FALSE	canonical	3	543	junction_2	12.1197726417986	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCGGTCAGGAGGATTA	NA	False	NA	24	True	AATAAA	-24	NA	57692417	57701043	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_57693116_57696869_57696993_57698849_57698949_57700767
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022837	chr11	+	193	1	Intergenic	novelGene_727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAAGCCTAACTTCATTG	2506	False	NA	NA	False	NA	NA	NA	57834219	57834412	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_57834200_57834400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022853	chr11	+	4339	18	ISM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	-187	3635	-187	-3632	5prime_fragment	FALSE	canonical	3	629	junction_13	50.0992786002251	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGGTCCGTTTCCTT	NA	False	NA	14	True	AATATA	-20	NA	57899702	57949225	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022857	chr11	+	6799	19	FSM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	-182	0	-182	0	multi-exon	FALSE	canonical	3	480	junction_18	70.0811038091661	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57899707	57952860	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022864	chr11	+	2620	11	ISM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	-149	11643	-149	7378	5prime_fragment	FALSE	canonical	3	653	junction_6	41.6984412178681	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTAAGAACCCTTCTTA	NA	False	NA	12	True	AATAAA	-24	NA	57899740	57941217	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022884	chr11	+	2326	7	NNC	ENSMUSG00000020515.14	novel	231	3	NA	NA	-1285	2	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	266.148872291848	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAAGTGTGGTCTTTGCT	NA	False	NA	16	True	AATAAA	-21	NA	57993693	58009422	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_+_57994039_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022898	chr11	+	2214	7	FSM	ENSMUSG00000020515.14	ENSMUST00000020822.12	2035	7	-177	-2	-177	2	multi-exon	FALSE	canonical	3	691	junction_3	50.6603614497787	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAAGTGTGGTCTTTGCT	NA	False	NA	16	True	AATAAA	-21	NA	57994801	58009422	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_57995035_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022935	chr11	-	213	1	Intergenic	novelGene_728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTAGAAAAGTGCCCTTC	NA	False	NA	NA	False	NA	NA	NA	58039661	58039448	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_58039400_58039700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022939	chr11	-	198	1	Intergenic	novelGene_729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCCTAAAATGGAGGCAG	NA	False	NA	NA	False	NA	NA	NA	58061546	58061348	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_58061300_58061500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022949	chr11	+	737	7	FSM	ENSMUSG00000020514.9	ENSMUST00000020820.2	722	7	0	-15	0	15	multi-exon	TRUE	canonical	3	1080	junction_1	114.661821603066	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGAAGTGTAGTGTATA	1481	False	NA	27	True	AGTAAA	-30	NA	58062486	58070406	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_58062540_58062619_58062669_58063858_58063977_58066102_58066169_58066957_58067036_58068042_58068113_58070103
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022952	chr11	+	899	7	NIC	ENSMUSG00000020514.9	novel	722	7	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	41	junction_2	483.207138698187	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTTCATTGAATTATTG	1484	False	NA	13	True	AGTAAA	-16	NA	58062489	58070392	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_58062540_58062619_58062848_58063858_58063977_58066102_58066169_58066957_58067036_58068042_58068113_58070103
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022976	chr11	+	3012	7	FSM	ENSMUSG00000013646.18	ENSMUST00000073128.7	2977	7	-32	-3	-6	0	multi-exon	FALSE	canonical	3	78	junction_1	22.1716786313832	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTACTGTCTGTTAAAAG	437	False	NA	19	True	AATAAA	-20	NA	58221543	58238554	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_58221619_58222079_58222690_58228562_58228626_58228774_58228904_58232111_58232274_58236137_58236312_58236755
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022993	chr11	+	199	1	Intergenic	novelGene_730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGACTCACTGTTCAAGG	NA	False	NA	NA	False	NA	NA	NA	58264064	58264263	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_58264100_58264300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000022998	chr11	+	4093	5	FSM	ENSMUSG00000072915.4	ENSMUST00000139337.3	4100	5	8	-1	8	1	multi-exon	FALSE	canonical	2	9	junction_4	6.04152298679729	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCCGAGTGGGCCTCTG	NA	False	NA	NA	False	AATAAA	-23	NA	58737991	58752783	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_58738086_58739471_58739529_58745085_58745213_58746886_58746980_58749061
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023032	chr11	+	926	1	FSM	ENSMUSG00000078851.5	ENSMUST00000108817.5	2146	1	1	1219	1	-1219	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGAGTTTTGCTGGTTT	NA	False	NA	10	True	TATAAA	-26	NA	58845511	58846437	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_58845500_58846400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023034	chr11	-	184	1	ISM	ENSMUSG00000085379.2	ENSMUST00000131221.2	3201	2	11728	391	11728	-391	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAGCCACTCCCAACAGA	NA	False	NA	NA	False	NA	NA	NA	58857148	58856964	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_-_58857000_58857100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023055	chr11	+	189	1	Intergenic	novelGene_731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTATCTGTCTTGAACAT	NA	False	NA	NA	False	NA	NA	NA	59033498	59033687	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_59033500_59033700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023105	chr11	-	2010	5	FSM	ENSMUSG00000048076.15	ENSMUST00000163300.8	1991	5	-18	-1	-18	1	multi-exon	FALSE	canonical	3	71	junction_4	968.523876835259	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTGTGTGTCAGTGCC	1937	False	NA	-1	True	AATAAA	-18	NA	59119006	59102236	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_59103522_59103646_59103772_59103968_59104080_59104165_59104350_59118701
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023106	chr11	-	1810	5	FSM	ENSMUSG00000048076.15	ENSMUST00000061242.8	1800	5	-7	-3	-7	1	multi-exon	FALSE	canonical	3	1704	junction_4	263.796678333902	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTGTGTGTCAGTGCC	1840	False	NA	-1	True	AATAAA	-18	NA	59119103	59102236	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_59103522_59103646_59103772_59103968_59104080_59104165_59104350_59118998
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023118	chr11	-	190	1	Intergenic	novelGene_732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATTTTACATGTATAAG	9674	False	NA	-2	True	NA	NA	NA	59192051	59191861	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_59191900_59192100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023155	chr11	-	3651	10	NNC	ENSMUSG00000020472.15	novel	4064	10	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	32.4200821774878	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTTCTTCTATCCTTGT	NA	False	NA	-1	True	AATAAA	-25	NA	59397060	59376345	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_59378641_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394209_59394637_59394973_59395081_59396653_59396789_59396989
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023178	chr11	-	223	1	Intergenic	novelGene_733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTATAGTCATTTTGAGG	7703	False	NA	NA	False	NA	NA	NA	59442291	59442068	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_59442100_59442300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023181	chr11	-	178	1	Intergenic	novelGene_734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGGAGCAAGTGGGGCTG	5156	False	NA	NA	False	NA	NA	NA	59444838	59444660	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_59444700_59444800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023186	chr11	+	4187	24	FSM	ENSMUSG00000005417.18	ENSMUST00000116371.8	8766	24	-50	4629	-38	2	multi-exon	TRUE	canonical	3	400	junction_2	48.3490381455828	248	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGCCCCTCTCATTCCTTC	3535	False	NA	19	True	ATTAAA	-16	NA	59553282	59667051	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023207	chr11	-	1778	2	FSM	ENSMUSG00000043648.8	ENSMUST00000125307.2	948	2	-24	-806	-21	0	multi-exon	FALSE	canonical	3	85	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGCATGTCTACCTTA	NA	False	NA	-13	True	AATAAA	-16	NA	59678492	59674722	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_59676052_59678043
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023215	chr11	-	3122	13	FSM	ENSMUSG00000032633.13	ENSMUST00000102697.10	3437	13	-22	337	-22	45	multi-exon	FALSE	canonical	3	222	junction_12	22.951034835057	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTACATGTTTTTATGTTA	NA	False	NA	0	True	AATAAA	-22	NA	59700864	59682570	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023225	chr11	-	2849	13	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-99	40	combination_of_known_junctions	FALSE	canonical	3	13	junction_12	74.517848346703	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCGACTACATGTTTTTA	NA	False	NA	-5	True	AATAAA	-17	NA	59700636	59682575	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700525
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023239	chr11	-	1664	12	FSM	ENSMUSG00000019373.12	ENSMUST00000019517.10	1646	12	-18	0	-18	0	multi-exon	FALSE	canonical	3	608	junction_5	45.2577558304642	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAATGTGTGTTCTCTCA	NA	False	NA	-4	True	ATTAAA	-27	NA	59730682	59708620	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59727716_59727847_59730495
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023247	chr11	+	204	1	Intergenic	novelGene_735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCACTTAATGGCATTAT	931	False	NA	NA	False	NA	NA	NA	59728558	59728762	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_59728600_59728800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023269	chr11	+	186	1	Intergenic	novelGene_736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATCCAGTCTCATGGGCT	NA	False	NA	NA	False	NA	NA	NA	59912371	59912557	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_59912400_59912600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023273	chr11	+	178	1	Intergenic	novelGene_737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGTAAAAGGAAAGAAAGAAA	291	False	NA	NA	False	NA	NA	NA	59948526	59948704	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_59948500_59948700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023275	chr11	+	182	1	Intergenic	novelGene_738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAGAGTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	59969373	59969555	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_59969400_59969600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023304	chr11	-	3884	19	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-186	-508	combination_of_known_junctions	FALSE	canonical	3	37	junction_18	97.6774106086452	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	1638	False	NA	-4	True	ATTAAA	-19	NA	60113593	60090422	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60113348
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023305	chr11	-	3776	19	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	0	-508	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	108.49533471224	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	3801	False	NA	-4	True	ATTAAA	-19	NA	60111430	60090422	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60097013_60097137_60097220_60097400_60097663_60098084_60111278
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023307	chr11	-	3810	19	FSM	ENSMUSG00000020538.16	ENSMUST00000020846.8	4299	19	-19	508	-19	-508	multi-exon	FALSE	canonical	3	238	junction_18	63.0911793643156	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	3782	False	NA	-4	True	ATTAAA	-19	NA	60111449	60090422	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60111278
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023310	chr11	-	3710	19	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-29	-508	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	108.49533471224	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	5287	False	NA	-4	True	ATTAAA	-19	NA	60101247	60090422	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60097013_60097137_60097220_60097400_60097663_60098084_60101161
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023328	chr11	-	4996	15	FSM	ENSMUSG00000000538.19	ENSMUST00000102683.11	4999	15	3	0	3	0	multi-exon	FALSE	canonical	3	31	junction_8	7.39553091745416	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTGTGATGTCTGA	NA	False	NA	-1	True	AATAAA	-14	NA	60243728	60117540	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_60121068_60121926_60121964_60123723_60123784_60132643_60132720_60133533_60133652_60135887_60136012_60136461_60136511_60139756_60139891_60149681_60149799_60151880_60152040_60153474_60153610_60161143_60161294_60165749_60165829_60171024_60171110_60243582
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023336	chr11	+	1467	1	Intergenic	novelGene_739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATATATATATATTGC	NA	False	NA	NA	False	NA	NA	NA	60237488	60238955	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_60237500_60239000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023374	chr11	+	1796	13	FSM	ENSMUSG00000020537.10	ENSMUST00000018568.4	1788	13	1	-9	1	9	multi-exon	FALSE	canonical	3	378	junction_10	43.4117879536576	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTTTCTGTGCTTGGT	NA	False	NA	49	True	NA	NA	NA	60345417	60359589	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_60345570_60347376_60347538_60350267_60350358_60350853_60350915_60351612_60351704_60352147_60352221_60352339_60352431_60352999_60353098_60353383_60353461_60354959_60355049_60355658_60355718_60358510_60358565_60358889
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023387	chr11	+	6030	4	FSM	ENSMUSG00000042650.4	ENSMUST00000044250.4	5730	4	-300	0	-300	0	multi-exon	FALSE	canonical	3	390	junction_2	6.48074069840786	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACCTGTTTGAGTTTTT	NA	False	NA	4	True	NA	NA	NA	60428503	60449338	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_60430022_60438513_60438595_60444539_60444696_60445063
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023392	chr11	+	180	2	Antisense	novelGene_ENSMUSG00000093978.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	120	junction_1	0	20	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAGGCAGAGGCTG	4091	False	NA	NA	False	NA	NA	NA	60458713	60566997	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr11_+_60458766_60566869
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023399	chr11	+	180	1	Intergenic	novelGene_740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGAGGCAGAGGC	4091	False	NA	NA	False	NA	NA	NA	60458713	60458893	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_60458700_60458900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023404	chr11	+	191	1	Intergenic	novelGene_741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCAGAGGCTGGCAGATC	1	True	NA	NA	False	NA	NA	NA	60538111	60538302	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_60538100_60538300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023406	chr11	+	181	1	Intergenic	novelGene_742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAGGCAGAGGCTG	8918	False	NA	NA	False	NA	NA	NA	60566816	60566997	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_60566800_60567000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023430	chr11	-	4086	30	FSM	ENSMUSG00000002812.5	ENSMUST00000002889.5	4060	30	-5	-21	-5	1	multi-exon	TRUE	canonical	3	227	junction_19	35.2603363548522	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACTAGTTTTTAAAAAAAG	NA	False	NA	NA	False	ATTAAA	-25	NA	60618094	60604947	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606217_60606286_60606416_60606491_60606553_60606628_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60611989_60612272_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613825_60613912_60614190_60614272_60615616_60615689_60615983_60616095_60617952
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023439	chr11	-	4062	30	NNC	ENSMUSG00000002812.5	novel	4060	30	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_19	52.3939163762945	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTACTTTTAATATTAAA	NA	False	NA	NA	False	ATTAAA	-26	NA	60618094	60604968	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606217_60606286_60606416_60606491_60606553_60606628_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611321_60611463_60611612_60611903_60611989_60612272_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613825_60613912_60614190_60614272_60615616_60615689_60615983_60616095_60617952
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023447	chr11	+	2549	4	FSM	ENSMUSG00000018599.6	ENSMUST00000018743.5	2522	4	-27	0	-27	0	multi-exon	FALSE	canonical	3	91	junction_2	26.4701089281224	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTAATTCTTGCTG	NA	False	NA	14	True	AATAAA	-17	NA	60619196	60623777	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_60619394_60621108_60621262_60621455_60621619_60621741
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023460	chr11	+	2718	3	FSM	ENSMUSG00000018599.6	ENSMUST00000154890.2	716	3	-47	-1955	-2	0	multi-exon	FALSE	canonical	3	114	junction_2	20.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTAATTCTTGCTG	NA	False	NA	14	True	AATAAA	-17	NA	60619221	60623777	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_60619394_60621108_60621619_60621741
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023487	chr11	+	7392	2	FSM	ENSMUSG00000049323.9	ENSMUST00000056907.7	7391	2	-4	3	-3	-3	multi-exon	FALSE	canonical	3	54	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTGGGTTCCTAATTGT	NA	False	NA	10	True	AATAAA	-18	NA	60668346	60679110	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_60671208_60674579
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023494	chr11	+	183	1	Intergenic	novelGene_743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATTTGAGCTAATATCC	NA	False	NA	NA	False	NA	NA	NA	60674120	60674303	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_60674100_60674300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023512	chr11	-	179	1	Intergenic	novelGene_744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAACAACTTTCC	1859	False	NA	NA	False	NA	NA	NA	60694023	60693844	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_60693800_60694000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023516	chr11	+	188	1	Intergenic	novelGene_745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAACAAAACACCCCCCCA	69	False	NA	NA	False	NA	NA	NA	60704767	60704955	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_60704800_60705000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023524	chr11	+	1252	7	FSM	ENSMUSG00000042569.14	ENSMUST00000042281.14	1553	7	33	268	-15	-268	multi-exon	FALSE	canonical	3	194	junction_1	30.3845721085919	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACAGGTCTTCTGAGTCT	NA	False	NA	43	True	AATAAA	-40	NA	60721489	60748981	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_60721558_60734990_60735170_60739926_60740031_60742567_60742785_60743244_60743338_60746525_60746679_60748543
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023538	chr11	+	208	1	Intergenic	novelGene_746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAGAGATTGGTT	3304	False	NA	NA	False	NA	NA	NA	60731795	60732003	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_60731800_60732000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023544	chr11	+	150	1	ISM	ENSMUSG00000042569.14	ENSMUST00000042281.14	1553	7	27372	271	27324	-271	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTACAGGTCTTCTGAG	NA	False	NA	40	True	AATAAA	-37	NA	60748828	60748978	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_+_60748800_60749000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023550	chr11	-	987	2	FSM	ENSMUSG00000043284.13	ENSMUST00000062677.12	1457	2	470	0	-15	0	multi-exon	FALSE	canonical	3	675	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTCTCTTTTCTGCC	7819	False	NA	-5	True	ATTAAA	-17	NA	60769628	60755277	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_60756175_60769538
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023552	chr11	-	1250	3	FSM	ENSMUSG00000043284.13	ENSMUST00000168218.8	1511	3	261	0	10	0	multi-exon	FALSE	canonical	3	26	junction_1	10	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTCTCTTTTCTGCC	7844	False	NA	-5	True	ATTAAA	-17	NA	60769603	60755277	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_60756175_60766585_60766874_60769538
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023566	chr11	+	180	1	Intergenic	novelGene_747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCGAGAGTGCAGGATGTA	NA	False	NA	NA	False	NA	NA	NA	60771901	60772081	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_60771900_60772100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023571	chr11	+	199	1	Intergenic	novelGene_748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAGCTAGGTGAAATCTG	494	False	NA	NA	False	NA	NA	NA	60778076	60778275	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_60778100_60778300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023594	chr11	+	2624	14	NNC	ENSMUSG00000018932.10	novel	2198	12	NA	NA	-884	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	152.493204815142	219	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCAAGCCTGCTCTTTC	NA	False	NA	NA	False	NA	NA	NA	60821974	60843637	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_+_60822161_60822295_60822493_60822815_60823098_60832705_60832773_60833130_60833180_60833976_60834091_60834312_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023631	chr11	+	189	1	Intergenic	novelGene_749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTATTGATTCTTTGTG	NA	False	NA	NA	False	NA	NA	NA	61085915	61086104	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_61085900_61086100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023654	chr11	-	2992	7	FSM	ENSMUSG00000001034.18	ENSMUST00000079080.13	3019	7	27	0	-3	0	multi-exon	FALSE	canonical	3	175	junction_5	27.9861076647365	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCGTCATTTTTGGGGT	NA	False	NA	1	True	AATACA	-19	NA	61385095	61379637	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384472_61384781_61384905
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023671	chr11	-	2912	7	NNC	ENSMUSG00000001034.18	novel	3019	7	NA	NA	-27	-5	intron_retention	FALSE	canonical	3	23	junction_6	78.9523414613032	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTCTGCGTCATTTTT	NA	False	NA	-4	True	AATACA	-14	NA	61385041	61379642	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384472_61384760_61384905
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023686	chr11	-	205	1	Intergenic	novelGene_750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGCTGATATTGTTTA	NA	False	NA	NA	False	NA	NA	NA	61394128	61393923	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_61393900_61394100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023698	chr11	-	4223	9	FSM	ENSMUSG00000001036.18	ENSMUST00000108713.8	4207	9	-16	0	-14	0	multi-exon	FALSE	canonical	3	259	junction_6	30.1330383466387	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	0	True	TATAAA	-25	NA	61470527	61408074	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61470392
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023700	chr11	-	4245	10	FSM	ENSMUSG00000001036.18	ENSMUST00000001063.15	4243	10	-2	0	0	0	multi-exon	FALSE	canonical	3	47	junction_6	113.072029921715	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	0	True	TATAAA	-25	NA	61470513	61408074	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61425403_61425440_61426096_61426210_61436975_61437738_61470392
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023730	chr11	-	4228	10	NIC	ENSMUSG00000001036.18	novel	4243	10	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	3	10	junction_9	124.448115025232	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGGGTTTTGGCTGTG	NA	False	NA	-3	True	TATAAA	-22	NA	61470500	61408077	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61438833_61438869_61470392
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023743	chr11	-	1757	11	FSM	ENSMUSG00000020528.15	ENSMUST00000168115.8	1771	11	14	0	-12	0	multi-exon	FALSE	canonical	3	49	junction_10	57.9565354382058	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGGATAGTTGTTCT	230	False	NA	-3	True	AATAAA	-26	NA	61652900	61620475	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61652779
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023755	chr11	-	1857	12	FSM	ENSMUSG00000020528.15	ENSMUST00000004955.14	1837	12	-20	0	6	0	multi-exon	FALSE	canonical	3	105	junction_11	44.7137821487915	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTATGTGGATAGTTG	222	False	NA	-7	True	AATAAA	-22	NA	61652908	61620479	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61647407_61647504_61652779
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023768	chr11	-	175	1	Intergenic	novelGene_751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGACAGTGGAAA	NA	False	NA	NA	False	NA	NA	NA	61676183	61676008	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_61676000_61676200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023772	chr11	+	198	1	Intergenic	novelGene_752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTCGTGCTTCCACTCTT	NA	False	NA	NA	False	NA	NA	NA	61726344	61726542	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_61726300_61726500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023778	chr11	-	3484	15	FSM	ENSMUSG00000047804.16	ENSMUST00000102650.10	3874	15	25	365	-1	0	multi-exon	FALSE	canonical	3	123	junction_4	17.9790127081323	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCAACTTCCTGCTTT	NA	False	NA	NA	False	NA	NA	NA	61821053	61762497	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_61763848_61768132_61768229_61768799_61768853_61777525_61777609_61781063_61781174_61784205_61784380_61787473_61787619_61791135_61791273_61794732_61794857_61795600_61795686_61800673_61800773_61805849_61806408_61806909_61807093_61813607_61813656_61820814
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023788	chr11	+	189	1	Intergenic	novelGene_753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGCATTGATGGACAGTA	NA	False	NA	NA	False	NA	NA	NA	61831444	61831633	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_61831400_61831600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023800	chr11	-	725	5	FSM	ENSMUSG00000014243.6	ENSMUST00000072916.5	732	5	7	0	7	0	multi-exon	TRUE	canonical	3	218	junction_4	57.8986182909402	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATCAAGTTATTGAAGT	NA	False	NA	-15	True	AATAAA	-25	NA	62172194	62158049	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_62158433_62159529_62159635_62164537_62164641_62167443_62167466_62172082
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023818	chr11	+	2268	10	FSM	ENSMUSG00000042298.19	ENSMUST00000050646.13	3410	10	-34	1176	-23	4	multi-exon	FALSE	canonical	3	145	junction_2	27.2192742167915	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATGGATTCTAATAATC	NA	False	NA	20	True	AATAAA	-16	NA	62172275	62206076	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_62172520_62172610_62172715_62174422_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023826	chr11	+	195	1	Intergenic	novelGene_754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAACCCAAGGTTTA	NA	False	NA	NA	False	NA	NA	NA	62268246	62268441	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_62268200_62268400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023834	chr11	-	4230	9	FSM	ENSMUSG00000018501.18	ENSMUST00000069456.11	3171	9	-7	-1052	2	1052	multi-exon	FALSE	canonical	3	310	junction_1	63.6836664695116	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTGTTCCATGTATTAT	NA	False	NA	NA	False	AATAAA	-16	NA	62348156	62291156	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023850	chr11	+	1661	7	FSM	ENSMUSG00000014245.9	ENSMUST00000014389.6	2174	7	0	513	0	-513	multi-exon	TRUE	canonical	3	156	junction_1	58.9736287580211	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTGGGCCCACACCTTT	NA	False	NA	25	True	AATAAA	-29	NA	62349285	62404730	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62400645_62400678_62402963_62403098_62403729
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023865	chr11	-	1037	5	FSM	ENSMUSG00000018509.9	ENSMUST00000018653.8	1032	5	3	-8	3	8	multi-exon	FALSE	canonical	3	1369	junction_4	69.2639877569867	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATATTTCTTTGAACTT	8374	False	NA	-6	True	AATAAA	-27	NA	62430084	62415763	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_62416114_62418317_62418433_62424710_62424781_62427107_62427207_62429681
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023879	chr11	+	1208	2	FSM	ENSMUSG00000019505.8	ENSMUST00000019649.4	1499	2	293	-2	-212	2	multi-exon	FALSE	canonical	3	35417	junction_1	0	5955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTCACTTGTGAAATTC	NA	False	NA	27	True	AATAAA	-26	NA	62442289	62444041	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_62442422_62442965
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023893	chr11	+	1710	1	NIC	ENSMUSG00000019505.8	novel	1499	2	NA	NA	-172	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTGTCACTTGTGAAAT	NA	False	NA	25	True	AATAAA	-24	NA	62442329	62444039	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_62442300_62444000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023905	chr11	+	1197	2	FSM	ENSMUSG00000019505.8	ENSMUST00000136938.2	890	2	53	-360	53	0	multi-exon	FALSE	canonical	3	711	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTGTCACTTGTGAAAT	NA	False	NA	25	True	AATAAA	-24	NA	62442554	62444039	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_62442678_62442965
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023918	chr11	+	465	5	FSM	ENSMUSG00000086841.2	ENSMUST00000131787.2	462	5	-1	-2	-1	2	multi-exon	FALSE	canonical	3	3662	junction_1	404.852056311932	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAGTGTTTTGGATGAA	NA	False	NA	NA	False	AATAAA	-20	NA	62493701	62495635	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_62493850_62494060_62494109_62494422_62494473_62495228_62495293_62495480
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023928	chr11	+	1932	1	FSM	ENSMUSG00000064437.4	ENSMUST00000082503.4	72	1	-203	-1657	-203	1657	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCCAGTGTTTTGGATG	NA	False	NA	NA	False	AATAAA	-18	NA	62493701	62495633	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_62493700_62495600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023934	chr11	+	479	4	ISM	ENSMUSG00000086841.2	ENSMUST00000131787.2	462	5	194	0	194	0	3prime_fragment	FALSE	canonical	3	3941	junction_3	324.165938302524	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCCAGTGTTTTGGATG	NA	False	NA	NA	False	AATAAA	-18	NA	62493896	62495633	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_+_62494109_62494422_62494473_62495228_62495293_62495480
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023954	chr11	-	179	1	Intergenic	novelGene_755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAATCATAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	62664553	62664374	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_62664400_62664600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023956	chr11	-	3006	6	FSM	ENSMUSG00000047342.18	ENSMUST00000054654.13	3051	6	45	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	11.4262854856686	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCAGGTTTTTAGTTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	62680243	62669212	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_62671726_62674497_62674588_62675704_62675820_62678784_62678871_62679755_62679916_62680201
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023975	chr11	+	1775	7	FSM	ENSMUSG00000014177.11	ENSMUST00000014321.5	1784	7	13	-4	13	4	multi-exon	FALSE	canonical	3	376	junction_1	45.7666181111663	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTGGTCCCATTTAGT	9254	False	NA	14	True	TATAAA	-22	NA	62770293	62786015	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_62770422_62772762_62772846_62774452_62774598_62775901_62775992_62777014_62777147_62782767_62782897_62784947
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000023997	chr11	-	2924	7	FSM	ENSMUSG00000042148.9	ENSMUST00000049091.9	2915	7	-8	-1	-6	1	multi-exon	FALSE	canonical	3	230	junction_1	27.1272720502613	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGCGTGTGTCCTGTGTT	4999	False	NA	-3	True	AATAAA	-15	NA	63970300	63853451	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_63855355_63867069_63867303_63884711_63884783_63936052_63936178_63962343_63962663_63964362_63964497_63970161
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024031	chr11	+	556	1	Intergenic	novelGene_756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGGACAGAGGCTAAGTTT	NA	False	NA	NA	False	NA	NA	NA	65026784	65027340	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_65026800_65027300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024033	chr11	+	4521	1	Intergenic	novelGene_757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTAGAGCCTGTGCAGC	NA	False	NA	NA	False	NA	NA	NA	65044237	65048758	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_65044200_65048800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024059	chr11	+	2228	7	FSM	ENSMUSG00000018347.17	ENSMUST00000071465.9	2270	7	43	-1	-26	0	multi-exon	FALSE	canonical	3	32	junction_5	5.11262055005932	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCTTGTAGCTGCCTTG	NA	False	NA	15	True	AATAAA	-21	NA	65698043	65720065	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_65698088_65705190_65705678_65706743_65706952_65707314_65707407_65712755_65712841_65713650_65713765_65718867
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024065	chr11	+	196	1	Intergenic	novelGene_758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGTATTTGAGAGGATT	NA	False	NA	NA	False	NA	NA	NA	66412188	66412384	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_66412200_66412400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024082	chr11	+	189	1	Intergenic	novelGene_759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	701	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAGATATGACATAGTAT	NA	False	NA	NA	False	NA	NA	NA	66880709	66880898	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_66880700_66880900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024095	chr11	-	1294	5	FSM	ENSMUSG00000020910.17	ENSMUST00000116363.2	1283	5	-24	13	0	-13	multi-exon	FALSE	canonical	3	79	junction_4	11.1579568022107	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTACTCTTAAGTATTCT	NA	False	NA	-11	True	CATAAA	-15	NA	66943420	66928879	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_66929272_66931044_66931162_66932306_66932934_66942506_66942605_66943360
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024105	chr11	+	2424	6	FSM	ENSMUSG00000069844.13	ENSMUST00000092996.5	2412	6	-22	10	-22	-10	multi-exon	FALSE	canonical	3	241	junction_2	26.3469163281019	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTTGGTACTTACATGAA	NA	False	NA	4	True	AATAAA	-22	NA	66943473	66956388	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_66943743_66944600_66944692_66946556_66946755_66947340_66947434_66949152_66949269_66954731
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024111	chr11	+	185	1	Intergenic	novelGene_760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATTCATTTGTCTTCTGG	NA	False	NA	NA	False	NA	NA	NA	66988312	66988497	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_66988300_66988500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024119	chr11	+	189	1	Intergenic	novelGene_761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATAGACCACTAAAATGAA	NA	False	NA	NA	False	NA	NA	NA	67191493	67191682	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_67191500_67191700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024128	chr11	+	4015	25	ISM	ENSMUSG00000060180.13	ENSMUST00000081911.12	5817	39	17698	-88	17698	4	3prime_fragment	FALSE	canonical	3	52	junction_14	14.9210887300119	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCTCTGCTGTGTTTGTT	NA	False	NA	26	True	AATAAA	-22	NA	67235626	67262416	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_+_67235705_67235806_67235895_67238714_67238833_67239625_67239750_67240395_67240533_67241059_67241316_67242779_67243023_67244398_67244576_67245472_67245619_67245727_67245819_67246628_67247019_67248933_67249061_67249146_67249266_67251106_67251304_67252074_67252259_67253230_67253397_67254012_67254138_67255287_67255597_67255677_67255882_67257978_67258105_67258382_67258554_67259930_67260036_67260134_67260231_67261745_67261881_67262313
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024135	chr11	-	187	1	Intergenic	novelGene_762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTATTTTATTTTTATAT	NA	False	NA	NA	False	NA	NA	NA	67405155	67404968	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_67405000_67405200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024144	chr11	-	2202	14	FSM	ENSMUSG00000020904.12	ENSMUST00000021287.12	2199	14	0	-3	0	1	multi-exon	TRUE	canonical	0	0	junction_9	5.45557637738374	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTCTGTGTCTCACA	NA	False	NA	NA	False	AATAAA	-21	NA	67856468	67815630	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_67816095_67817204_67817317_67818134_67818238_67821554_67821707_67822549_67822696_67826649_67826799_67829742_67829914_67830604_67830706_67836178_67836296_67837123_67837224_67840393_67840523_67844306_67844444_67844797_67844998_67856347
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024148	chr11	+	862	8	FSM	ENSMUSG00000020903.14	ENSMUST00000021285.14	4394	8	265	3267	-11	111	multi-exon	FALSE	canonical	3	260	junction_1	20.1626043021455	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTGTACCTTGTTTGG	NA	False	NA	19	True	AATAAA	-19	NA	67857283	68094707	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_67857344_67860597_67860698_67864058_67864154_67875388_67875500_67902140_67902266_67911731_67911825_68000102_68000205_68094531
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024158	chr11	-	194	1	Intergenic	novelGene_763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAGTAGAGATGTAAGGA	852	False	NA	NA	False	TTTAAA	-5	NA	67921322	67921128	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_67921100_67921300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024166	chr11	+	199	1	Intergenic	novelGene_764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTTGAAAATAATTAACAC	NA	False	NA	NA	False	NA	NA	NA	68042536	68042735	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_68042500_68042700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024173	chr11	-	5902	7	FSM	ENSMUSG00000020902.13	ENSMUST00000021284.4	5738	7	-169	5	17	-5	multi-exon	FALSE	canonical	3	78	junction_5	10.7922297150414	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCCCAGCCTTTCTTG	NA	False	NA	-1	True	AATAAA	-16	NA	68277821	68100194	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_68104161_68117361_68117437_68148280_68148335_68151322_68151473_68168248_68168438_68275928_68277011_68277435
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024183	chr11	+	186	1	Intergenic	novelGene_765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTCTTATTATTTTAT	440	False	NA	NA	False	NA	NA	NA	68540054	68540240	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_68540100_68540200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024201	chr11	+	189	1	Intergenic	novelGene_766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTGAGATGGCTCAG	5881	False	NA	NA	False	NA	NA	NA	68620100	68620289	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_68620100_68620300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024219	chr11	-	2387	9	FSM	ENSMUSG00000018736.15	ENSMUST00000018880.14	2382	9	-5	0	-5	0	multi-exon	FALSE	canonical	3	185	junction_5	15.9530561335438	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCGAGATTGCTTTATTT	NA	False	NA	NA	False	AATAAA	-24	NA	68743966	68712259	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_68713492_68720740_68720893_68724179_68724272_68726975_68727150_68730696_68730834_68732845_68732995_68734646_68734801_68736152_68736251_68743767
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024228	chr11	+	2682	1	Antisense	novelGene_ENSMUSG00000018736.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTCCAGACATGTAATTCA	8726	False	NA	NA	False	NA	NA	NA	68713232	68715914	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr11_+_68713200_68715900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024236	chr11	+	615	4	FSM	ENSMUSG00000060938.15	ENSMUST00000073471.13	526	4	-60	-29	-60	29	multi-exon	FALSE	canonical	3	13360	junction_1	1585.12172683642	1396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTTTTCTGTGGCTTAC	NA	False	NA	-8	True	ATTAAA	-43	NA	68792348	68795389	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_68792451_68793095_68793269_68794004_68794146_68795190
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024245	chr11	+	1166	3	NIC	ENSMUSG00000060938.15	novel	526	4	NA	NA	5	0	intron_retention	FALSE	canonical	3	14740	junction_2	1226.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGTCTTGTGTGGTGTT	NA	False	NA	33	True	ATTAAA	-14	NA	68792413	68795360	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_68793269_68794004_68794146_68795190
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024249	chr11	+	686	4	NIC	ENSMUSG00000060938.15	novel	657	4	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	3	269	junction_1	7467.32754515741	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTTGTGTGGTGTTTT	NA	False	NA	35	True	ATTAAA	-16	NA	68792438	68795362	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_68792639_68793095_68793269_68794004_68794146_68795190
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024262	chr11	-	180	1	Intergenic	novelGene_767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAATTTTAAAAAAAGAAAG	NA	False	NA	-2	True	NA	NA	NA	68801930	68801750	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_68801800_68801900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024275	chr11	-	833	5	FSM	ENSMUSG00000032892.15	ENSMUST00000038644.5	820	5	-13	0	-13	0	multi-exon	FALSE	canonical	3	482	junction_2	47.2989164780759	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGCCTTCAAATCTA	7223	False	NA	-2	True	AATAAA	-22	NA	68864682	68863309	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_68863568_68863768_68863855_68863942_68864100_68864266_68864384_68864467
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024290	chr11	-	6387	28	FSM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	-12	-2	-12	2	multi-exon	FALSE	canonical	3	373	junction_27	41.3360546031052	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTTCCGATGGCCTTA	NA	False	NA	-9	True	NA	NA	NA	68899298	68876520	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024305	chr11	+	249	1	Intergenic	novelGene_768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGATCACTGAAAGTGCC	NA	False	NA	NA	False	NA	NA	NA	68899542	68899791	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_68899500_68899800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024308	chr11	-	172	1	Intergenic	novelGene_769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAATAATAATAAGCCTC	NA	False	NA	NA	False	NA	NA	NA	68902504	68902332	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_68902300_68902500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024325	chr11	+	3987	23	FSM	ENSMUSG00000020898.19	ENSMUST00000116359.3	3978	23	-9	0	2	0	multi-exon	FALSE	canonical	3	218	junction_14	52.8328292942908	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5263	False	NA	18	True	AATAAA	-18	NA	68906913	68927296	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024339	chr11	+	3748	22	NIC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	3	37	junction_3	98.8413373914187	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5287	False	NA	18	True	AATAAA	-18	NA	68906937	68927296	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_68906992_68911855_68912020_68913202_68913441_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024341	chr11	+	3947	23	FSM	ENSMUSG00000020898.19	ENSMUST00000152979.8	3976	23	26	3	15	0	multi-exon	FALSE	canonical	3	48	junction_2	94.2205957376466	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5287	False	NA	18	True	AATAAA	-18	NA	68906937	68927296	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_68906992_68911855_68912020_68913218_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024365	chr11	+	1973	8	FSM	ENSMUSG00000020897.13	ENSMUST00000021277.6	1950	8	-20	-3	-15	3	multi-exon	FALSE	canonical	3	581	junction_1	36.6756327936728	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGGTCTGAATATGCT	NA	False	NA	19	True	AATAAA	-29	NA	68936457	68942493	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_68936835_68938610_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024385	chr11	+	782	5	FSM	ENSMUSG00000020895.15	ENSMUST00000075980.12	779	5	-3	0	-3	0	multi-exon	FALSE	canonical	3	348	junction_4	23.6893963620857	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGCGTATACTATTTTT	4644	False	NA	NA	False	AATAAA	-19	NA	68961628	68963856	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_68961860_68962049_68962118_68962199_68962301_68963248_68963346_68963571
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024395	chr11	+	184	1	Intergenic	novelGene_770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATCACAATTAAACATGG	9048	False	NA	NA	False	NA	NA	NA	68966032	68966216	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_68966000_68966200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024397	chr11	-	263	1	Intergenic	novelGene_771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGAAGGTTTTTTCTGGG	7107	False	NA	NA	False	NA	NA	NA	68966745	68966482	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_68966500_68966700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024413	chr11	+	2789	4	FSM	ENSMUSG00000020894.17	ENSMUST00000117780.2	1113	4	18	-1694	6	0	multi-exon	FALSE	canonical	3	124	junction_1	8.17856276425687	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTGTCCAAAATCTTTT	NA	False	NA	18	True	AATAAA	-18	NA	68979353	68983210	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_68979454_68979931_68980053_68980556_68980716_68980801
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024425	chr11	-	183	1	ISM	ENSMUSG00000020891.12	ENSMUST00000021262.10	3226	14	13417	312	12958	-312	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAACAAGAGAGAGGGACA	NA	False	NA	NA	False	NA	NA	NA	69075252	69075069	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_-_69075100_69075300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024432	chr11	+	186	1	Intergenic	novelGene_772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAGGAAAGGAAAGGAAA	5599	False	NA	NA	False	NA	NA	NA	69079025	69079211	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_69079000_69079200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024451	chr11	+	753	4	FSM	ENSMUSG00000049299.15	ENSMUST00000102601.10	759	4	6	0	6	0	multi-exon	FALSE	canonical	3	452	junction_2	10.7082522694727	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTGAGTGTGAGTTC	NA	False	NA	16	True	AATAAA	-25	NA	69214894	69216619	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_69215083_69215220_69215292_69215649_69215789_69216264
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024457	chr11	+	2526	14	FSM	ENSMUSG00000018470.9	ENSMUST00000018614.3	2538	14	6	6	6	-6	multi-exon	FALSE	canonical	3	22	junction_1	7.85293824331087	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCACGACCACGTCTGAA	NA	False	NA	5	True	AATAAA	-14	NA	69217089	69223862	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_69217750_69218945_69218990_69219076_69219115_69219334_69219415_69220675_69220721_69220808_69220854_69221008_69221053_69221222_69221310_69221565_69221652_69221876_69221998_69222087_69222183_69222285_69222407_69222561_69222651_69222891
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024462	chr11	+	1772	2	FSM	ENSMUSG00000043419.12	ENSMUST00000129321.2	2081	2	309	0	-1	0	multi-exon	FALSE	canonical	3	42	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGAAAGACTGTTATTG	NA	False	NA	10	True	AATAAA	-19	NA	69231595	69233467	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_69231885_69231984
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024478	chr11	+	204	1	Intergenic	novelGene_773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGAATCAGTCACCAGA	NA	False	NA	NA	False	NA	NA	NA	69284850	69285054	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_69284800_69285100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024494	chr11	+	390	2	FSM	ENSMUSG00000059278.10	ENSMUST00000124932.2	404	2	11	3	11	-3	multi-exon	FALSE	canonical	3	1280	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCTGTGTCTGTGTGTA	NA	False	NA	14	True	ATTAAA	-14	NA	69286954	69287503	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_69287187_69287345
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024505	chr11	-	179	1	Intergenic	novelGene_774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAGTTAAGGAAA	9033	False	NA	NA	False	NA	NA	NA	69359038	69358859	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_69358900_69359000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024509	chr11	+	247	1	Intergenic	novelGene_775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	361	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCACTGATTGCTCTACCA	9112	False	NA	NA	False	NA	NA	NA	69432448	69432695	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_69432400_69432700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024535	chr11	+	1785	11	FSM	ENSMUSG00000059552.14	ENSMUST00000005371.12	1772	11	-11	-2	-11	2	multi-exon	FALSE	canonical	3	1895	junction_3	134.752402575984	1525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTTGAGAGGTTGATAT	NA	False	NA	18	True	AATAAA	-19	NA	69471173	69482701	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024544	chr11	+	1855	11	FSM	ENSMUSG00000059552.14	ENSMUST00000171247.8	1867	11	13	-1	13	0	multi-exon	FALSE	canonical	3	351	junction_10	535.886405873484	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTGAGAGGTTGAT	NA	False	NA	16	True	AATAAA	-17	NA	69471197	69482699	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482079
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024555	chr11	+	1807	10	NIC	ENSMUSG00000059552.14	novel	1772	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	1895	junction_3	137.00455070391	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTGAGAGGTTGAT	NA	False	NA	16	True	AATAAA	-17	NA	69471228	69482699	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480689_69481481_69481589_69482175
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024557	chr11	+	2459	10	NIC	ENSMUSG00000059552.14	novel	1772	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	1895	junction_3	129.307080191513	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTGAGAGGTTGAT	NA	False	NA	16	True	AATAAA	-17	NA	69471228	69482699	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024564	chr11	+	2140	12	NNC	ENSMUSG00000059552.14	novel	1772	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	779.63500678308	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTGAGAGGTTGAT	NA	False	NA	16	True	AATAAA	-17	NA	69471228	69482699	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_+_69471342_69471879_69472292_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024575	chr11	-	2985	7	FSM	ENSMUSG00000041329.14	ENSMUST00000047889.13	2842	7	-135	-8	-22	8	multi-exon	FALSE	canonical	3	185	junction_6	5.18544972870135	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGTGTGCTTGTCTT	NA	False	NA	1	True	AATAAA	-41	NA	69496790	69490553	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_69492239_69492350_69492450_69493250_69493308_69493525_69493732_69493832_69493938_69494250_69494380_69496086
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024596	chr11	+	3164	16	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-39	0	intron_retention	FALSE	canonical	3	970	junction_6	96.750308641483	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523776	69544123	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024607	chr11	+	2976	17	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_14	285.018201173188	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523787	69544123	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542806_69542900_69543035_69543134_69543429
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024609	chr11	+	3316	15	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-25	0	intron_retention	FALSE	canonical	3	970	junction_6	98.3810013598735	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523790	69544123	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69540055_69540553_69540664_69541288_69541376_69541669_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024627	chr11	-	1310	7	FSM	ENSMUSG00000018761.15	ENSMUST00000018905.12	1321	7	11	0	11	0	multi-exon	FALSE	canonical	3	557	junction_4	37.1427426738163	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTAGTGTGCATTCT	6772	False	NA	-4	True	AATAAA	-33	NA	69553457	69547522	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_69548155_69548245_69548357_69548550_69548670_69548761_69548848_69549391_69549525_69549636_69549703_69553294
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024638	chr11	-	1299	7	FSM	ENSMUSG00000018761.15	ENSMUST00000148242.8	971	7	-3	-325	-3	-5	multi-exon	FALSE	canonical	3	35	junction_4	228.446018423026	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATTGTGTTTAGTGTGC	6813	False	NA	-9	True	AATAAA	-28	NA	69553416	69547527	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_69548155_69548245_69548357_69548550_69548670_69548761_69548883_69549391_69549525_69549636_69549703_69553294
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024665	chr11	-	469	1	ISM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	4912	1	658	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	1998	False	NA	63	True	AATAAA	-18	NA	69558231	69557762	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_-_69557800_69558200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024672	chr11	-	1844	10	FSM	ENSMUSG00000059796.17	ENSMUST00000128519.8	1845	10	0	1	0	0	multi-exon	FALSE	canonical	3	9657	junction_9	1461.90417007037	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563143	69557762	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024675	chr11	-	1722	10	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	337	junction_9	4278.8197518867	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563141	69557762	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69563104
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024682	chr11	-	2026	10	ISM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	1049	1	-46	0	3prime_fragment	TRUE	canonical	3	12659	junction_4	747.862138216515	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69562094	69557762	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024683	chr11	-	1785	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_10	4160.14526669442	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563139	69557762	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561819_69563104
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024700	chr11	-	1848	10	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	9657	junction_9	1387.20502369973	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563141	69557762	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024721	chr11	-	2477	11	FSM	ENSMUSG00000005204.13	ENSMUST00000005336.9	2313	11	-159	-5	79	5	multi-exon	FALSE	canonical	3	762	junction_10	82.7371742326265	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGTCTTCCTTAAGGG	8371	False	NA	0	True	AATAAA	-22	NA	69572831	69563935	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024726	chr11	-	2219	11	FSM	ENSMUSG00000005204.13	ENSMUST00000066760.8	2219	11	6	-6	6	0	multi-exon	FALSE	canonical	3	37	junction_10	281.644616493907	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGTGGTGGTCTTCCTT	8298	False	NA	-5	True	AATAAA	-17	NA	69572904	69563940	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572814
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024745	chr11	+	188	1	Intergenic	novelGene_776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGTTTGTAAAGTTGTTT	1344	False	NA	NA	False	NA	NA	NA	69587380	69587568	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_69587400_69587600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024747	chr11	+	193	1	Intergenic	novelGene_777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCCAATCAACACAAAGAAG	329	False	NA	NA	False	NA	NA	NA	69590002	69590195	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_69590000_69590200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024755	chr11	+	231	1	Intergenic	novelGene_778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCATATCTTTTTTTT	2950	False	NA	NA	False	NA	NA	NA	69594449	69594680	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_69594400_69594700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024764	chr11	+	240	1	Intergenic	novelGene_779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCCAGCTGCCTTCCTA	NA	False	NA	NA	False	AAAAAG	-33	NA	69614379	69614619	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_69614400_69614600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024779	chr11	-	6742	29	FSM	ENSMUSG00000005198.16	ENSMUST00000058470.16	6740	29	-2	0	-2	0	multi-exon	FALSE	canonical	2	202	junction_15	57.5883527056204	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTATGTGTACTGACTG	NA	False	NA	-3	True	AATAAA	-22	NA	69649465	69624822	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633736_69634079_69634284_69634416_69634512_69634628_69634798_69634876_69635087_69635422_69635634_69635745_69635871_69636394_69636528_69636747_69636969_69637092_69637255_69637523_69637806_69637930_69638105_69638201_69638339_69638806_69638940_69648956
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024782	chr11	-	6738	29	NNC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	83.585865663852	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTATGTGTACTGACTG	NA	False	NA	-3	True	AATAAA	-22	NA	69649459	69624822	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633736_69634079_69634284_69634416_69634512_69634628_69634798_69634876_69635087_69635420_69635634_69635745_69635871_69636394_69636528_69636747_69636969_69637092_69637255_69637523_69637806_69637930_69638105_69638201_69638339_69638806_69638940_69648956
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024786	chr11	+	191	1	Intergenic	novelGene_780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACACTAAAAAATTCCACC	7775	False	NA	NA	False	NA	NA	NA	69641522	69641713	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_69641500_69641700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024798	chr11	+	196	1	Intergenic	novelGene_781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGGTCAGAGCTGGGTG	NA	False	NA	NA	False	NA	NA	NA	69706997	69707193	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_69707000_69707200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024802	chr11	+	505	4	FSM	ENSMUSG00000070394.11	ENSMUST00000094065.5	492	4	-13	0	-3	0	multi-exon	FALSE	canonical	3	1210	junction_1	145.470119115767	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTCTTTATTCATC	NA	False	NA	NA	False	ATTAAA	-21	NA	69729336	69730444	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_69729476_69729745_69729778_69730013_69730095_69730191
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024810	chr11	+	401	4	FSM	ENSMUSG00000070394.11	ENSMUST00000133967.8	421	4	25	-5	15	0	multi-exon	FALSE	canonical	3	250	junction_1	597.808404832927	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTCTTTATTCATC	NA	False	NA	NA	False	ATTAAA	-21	NA	69729364	69730444	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_69729400_69729745_69729778_69730013_69730095_69730191
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024820	chr11	+	1887	8	FSM	ENSMUSG00000019461.13	ENSMUST00000108633.9	2785	8	0	898	0	117	multi-exon	FALSE	canonical	3	60	junction_1	4.6246897303539	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGTTTTCATCACCCATA	NA	False	NA	NA	False	ATTAAA	-26	NA	69737442	69741986	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_69737518_69737733_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024832	chr11	-	2442	22	FSM	ENSMUSG00000001588.13	ENSMUST00000001631.7	2482	22	41	-1	41	1	multi-exon	TRUE	canonical	3	20	junction_20	9.40183800238705	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTTAGTTCATTTAC	9614	False	NA	-5	True	ATTAAA	-16	NA	69786324	69772391	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_69772552_69772807_69772858_69773207_69773319_69773410_69773521_69774409_69774583_69775147_69775318_69775411_69775507_69775621_69775692_69776218_69776431_69776518_69776643_69777793_69777895_69777981_69778034_69780062_69780173_69780261_69780337_69780443_69780540_69780645_69780691_69780824_69781009_69781259_69781319_69781414_69781469_69781689_69781810_69785425_69785484_69786111
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024842	chr11	-	206	1	Intergenic	novelGene_782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGTTGTTGCTCTAAAA	9722	False	NA	NA	False	NA	NA	NA	69795923	69795717	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_69795700_69795900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024843	chr11	+	1197	11	FSM	ENSMUSG00000023170.15	ENSMUST00000116358.8	1159	11	-34	-4	-34	3	multi-exon	FALSE	canonical	3	122	junction_1	67.5763272159711	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGAGTGCTGTTTATTT	4057	False	NA	15	True	AATAAA	-25	NA	69804841	69807420	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_69804897_69805098_69805260_69805577_69805688_69805758_69805872_69805964_69806045_69806133_69806217_69806456_69806611_69806690_69806781_69806858_69806939_69807023_69807120_69807245
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024849	chr11	+	1397	10	FSM	ENSMUSG00000023170.15	ENSMUST00000057884.6	1220	10	-174	-3	-32	3	multi-exon	FALSE	canonical	3	266	junction_9	31.9443961352292	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGAGTGCTGTTTATTT	4059	False	NA	15	True	AATAAA	-25	NA	69804843	69807420	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_69805260_69805577_69805688_69805758_69805872_69805964_69806045_69806133_69806217_69806456_69806611_69806690_69806781_69806858_69806939_69807023_69807120_69807245
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024867	chr11	-	1450	7	FSM	ENSMUSG00000078812.11	ENSMUST00000043419.10	1437	7	-5	-8	-5	2	multi-exon	FALSE	canonical	3	627	junction_6	9644.56352477049	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTTGTTTATTTGTTGA	9936	False	NA	-7	True	AATAAA	-28	NA	69812217	69807537	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811166_69811261_69811988
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024872	chr11	-	1411	6	FSM	ENSMUSG00000078812.11	ENSMUST00000108613.10	1343	6	-60	-8	-60	2	multi-exon	FALSE	canonical	3	20384	junction_3	507.007534460781	4553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTTGTTTATTTGTTGA	9881	False	NA	-7	True	AATAAA	-28	NA	69812272	69807537	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811988
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024877	chr11	-	1351	6	FSM	ENSMUSG00000078812.11	ENSMUST00000108610.8	1409	6	66	-8	66	2	multi-exon	FALSE	canonical	3	855	junction_5	8144.23656336185	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTTGTTTATTTGTTGA	7093	False	NA	-7	True	AATAAA	-28	NA	69811390	69807537	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811166
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024913	chr11	+	185	1	Intergenic	novelGene_783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAGTAAAGGATT	NA	False	NA	NA	False	NA	NA	NA	69821621	69821806	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_69821600_69821800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024929	chr11	-	1393	8	ISM	ENSMUSG00000018565.18	ENSMUST00000108594.8	1454	9	705	0	149	0	3prime_fragment	FALSE	canonical	3	471	junction_7	49.073455978081	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGGTAATGCTTAAACA	9605	False	NA	0	True	AATAAA	-30	NA	69871373	69859049	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_-_69859367_69859921_69860023_69860318_69860415_69861386_69861569_69865865_69866087_69870655_69870737_69870824_69870886_69871039
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024948	chr11	+	905	4	FSM	ENSMUSG00000018567.15	ENSMUST00000018711.15	1351	4	446	0	-50	0	multi-exon	FALSE	canonical	3	795	junction_2	75.6350888587213	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCCTGTGTCATTCCAC	5174	False	NA	16	True	AATAAA	-26	NA	69882414	69885777	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_69882629_69883190_69883270_69883407_69883527_69885284
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000024969	chr11	+	3026	15	FSM	ENSMUSG00000020888.17	ENSMUST00000019362.15	2968	15	-50	-8	-50	8	multi-exon	FALSE	canonical	3	488	junction_4	30.5160546571265	307	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGGCTCCTTTCTTTG	7085	False	NA	20	True	AATAAA	-24	NA	69891370	69900945	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106_69899287_69899602_69899822_69899969
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025005	chr11	-	880	6	FSM	ENSMUSG00000020831.19	ENSMUST00000108578.9	880	6	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	133.830340356737	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGCTGCCAGCTGCCG	NA	False	NA	-12	True	ATTAAA	-15	NA	70128740	70126031	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_70126291_70126521_70126627_70126849_70127038_70127702_70127805_70128356_70128452_70128609
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025015	chr11	-	618	3	FSM	ENSMUSG00000093989.2	ENSMUST00000040428.4	611	3	-7	0	-7	0	multi-exon	FALSE	canonical	3	718	junction_2	4	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCTGTCTGTGCTTTCA	NA	False	NA	-1	True	AATAAA	-20	NA	70130675	70128949	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_70129297_70129763_70129841_70130481
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025029	chr11	+	200	1	Intergenic	novelGene_784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATAGCCCCGTCTGACA	NA	False	NA	NA	False	NA	NA	NA	70160190	70160390	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_70160200_70160400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025032	chr11	+	202	1	Intergenic	novelGene_785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGACAGAGGGGACAAA	2851	False	NA	NA	False	NA	NA	NA	70201725	70201927	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_70201700_70201900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025057	chr11	-	184	1	Intergenic	novelGene_786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGAACACATAAGAACTAG	NA	False	NA	NA	False	NA	NA	NA	70309144	70308960	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_70309000_70309100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025062	chr11	+	180	1	Intergenic	novelGene_787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTGGAAATGGCCAGCC	NA	False	NA	NA	False	NA	NA	NA	70316123	70316303	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_70316100_70316300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025090	chr11	+	208	1	Intergenic	novelGene_788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCTATACGTACCTGGT	NA	False	NA	NA	False	NA	NA	NA	70364035	70364243	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_70364000_70364200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025096	chr11	-	148	1	Intergenic	novelGene_789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGGCAGAGTAGAAAACAG	9470	False	NA	NA	False	AATAAA	-37	NA	70397671	70397523	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_70397500_70397700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025101	chr11	+	193	1	Intergenic	novelGene_790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATCAGGAAAGCCA	NA	False	NA	NA	False	AATAAA	-9	NA	70413052	70413245	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_70413100_70413200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025112	chr11	+	1038	6	FSM	ENSMUSG00000018286.7	ENSMUST00000018430.7	798	6	-29	-211	-10	2	multi-exon	FALSE	canonical	3	5742	junction_5	304.149305440601	246	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTCTGCCTGCATGT	NA	False	NA	19	True	AATAAA	-20	NA	70416182	70418686	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_70416322_70416710_70416779_70417119_70417252_70417369_70417500_70418004_70418150_70418262
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025148	chr11	-	181	1	Intergenic	novelGene_791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGTTGTTTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	70527671	70527490	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_70527500_70527700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025151	chr11	-	1678	8	FSM	ENSMUSG00000014606.15	ENSMUST00000014750.15	1711	8	33	0	33	0	multi-exon	FALSE	canonical	3	687	junction_5	58.5020495018625	224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTGTAAAGTCGTAACT	NA	False	NA	0	True	ATTAAA	-28	NA	70537851	70535021	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025161	chr11	+	1882	9	FSM	ENSMUSG00000040746.16	ENSMUST00000037534.8	1833	9	-49	0	3	0	multi-exon	FALSE	canonical	3	485	junction_5	18.8244355825082	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAGATCATCTTTACAC	9141	False	NA	30	True	AATAAA	-31	NA	70538063	70542247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025170	chr11	+	1746	10	NNC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_1	154.113954952532	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAGATCATCTTTACAC	9186	False	NA	30	True	AATAAA	-31	NA	70538108	70542247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_+_70538140_70538230_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025178	chr11	+	1910	8	ISM	ENSMUSG00000040746.16	ENSMUST00000037534.8	1833	9	0	0	0	0	intron_retention	FALSE	canonical	3	485	junction_5	20.0173394223863	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAGATCATCTTTACAC	9190	False	NA	30	True	AATAAA	-31	NA	70538112	70542247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025190	chr11	-	2227	2	ISM	ENSMUSG00000018293.5	ENSMUST00000018437.3	861	3	9	-6	9	6	intron_retention	FALSE	canonical	3	10036	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTGGTTTGCACTTG	NA	False	NA	NA	False	AATAAA	-22	NA	70545461	70542669	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_-_70543048_70543612
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025201	chr11	-	830	3	FSM	ENSMUSG00000018293.5	ENSMUST00000178254.2	724	3	-14	-92	9	3	multi-exon	FALSE	canonical	3	1190	junction_2	4423	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCTGTGTTGGTTTGCAC	NA	False	NA	NA	False	AATAAA	-19	NA	70545461	70542672	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_70543048_70543612_70543781_70545174
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025212	chr11	+	1452	12	FSM	ENSMUSG00000060600.16	ENSMUST00000072841.12	1454	12	2	0	0	0	multi-exon	FALSE	canonical	2	23	junction_1	14.3486688414174	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTGTGTTCCTTAGGA	7115	False	NA	13	True	AATAAA	-16	NA	70548029	70553339	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_70548094_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025217	chr11	-	1055	7	FSM	ENSMUSG00000018287.13	ENSMUST00000018431.13	1159	7	109	-5	-17	5	multi-exon	FALSE	canonical	3	730	junction_3	39.5179284207392	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGATACTAGTCCATTGA	NA	False	NA	-4	True	AATAAA	-38	NA	70560133	70554591	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_70555047_70555145_70555303_70555403_70555494_70555608_70555694_70555813_70555903_70556122_70556191_70560022
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025237	chr11	+	5432	18	FSM	ENSMUSG00000020817.17	ENSMUST00000076270.13	5408	18	-24	0	-24	0	multi-exon	TRUE	canonical	3	115	junction_10	23.0000752217816	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAATAAATAAATTTATT	NA	False	NA	NA	False	AATAAA	-18	NA	70735579	70833931	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025252	chr11	-	2463	17	FSM	ENSMUSG00000040667.12	ENSMUST00000108531.8	2453	17	-10	0	-10	0	multi-exon	FALSE	canonical	3	352	junction_6	132.716744893024	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGCTTTACAATTAAAGT	NA	False	NA	1	True	AATAAA	-31	NA	70860809	70833897	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025257	chr11	-	2438	17	FSM	ENSMUSG00000040667.12	ENSMUST00000108530.2	2389	17	-19	-30	0	0	multi-exon	FALSE	canonical	3	409	junction_6	121.230008016786	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGCTTTACAATTAAAGT	NA	False	NA	1	True	AATAAA	-31	NA	70860799	70833897	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835797_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025295	chr11	-	1183	6	FSM	ENSMUSG00000018446.9	ENSMUST00000078528.7	1175	6	-10	2	-10	-2	multi-exon	FALSE	canonical	3	4814	junction_4	225.05234946563	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTCTTTCGCCCACATC	NA	False	NA	-28	True	AATAAA	-30	NA	70873862	70868663	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_70869071_70869253_70869377_70869514_70869611_70870835_70870930_70872995_70873147_70873550
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025302	chr11	-	1004	5	NIC	ENSMUSG00000018446.9	novel	1175	6	NA	NA	13	-4	combination_of_known_splicesites	FALSE	canonical	3	68	junction_1	2231.85326578608	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAGGAAAGTTGAGGTT	NA	False	NA	34	True	AATAAA	-16	NA	70873820	70868677	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_70869071_70869514_70869611_70870835_70870930_70872995_70873147_70873550
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025315	chr11	-	3643	7	FSM	ENSMUSG00000018442.14	ENSMUST00000143850.8	3666	7	26	-3	-2	3	multi-exon	FALSE	canonical	3	526	junction_4	25.493463214453	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTTGTATTTTTAATTA	NA	False	NA	0	True	NA	NA	NA	70910103	70898264	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909204_70909969
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025340	chr11	+	2993	3	FSM	ENSMUSG00000040599.14	ENSMUST00000048807.12	3003	3	0	10	0	-10	multi-exon	FALSE	canonical	3	76	junction_1	24	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTCAGTATTTATGTATT	NA	False	NA	6	True	AATAAA	-27	NA	70910436	70918187	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_70911016_70915375_70915538_70915935
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025365	chr11	+	760	4	FSM	ENSMUSG00000020803.4	ENSMUST00000021158.4	981	4	-4	225	-4	-225	multi-exon	FALSE	canonical	3	1302	junction_3	85.4959388249264	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTTTTTAACACGTGG	NA	False	NA	19	True	AATAAA	-19	NA	72098368	72100616	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_72098595_72099078_72099161_72099555_72099632_72100240
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025372	chr11	-	636	4	FSM	ENSMUSG00000020801.9	ENSMUST00000021157.9	1161	4	531	-6	-8	6	multi-exon	FALSE	canonical	3	203	junction_2	14.0079342596338	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCCACTTTGATTTCTC	NA	False	NA	1	True	AATAAA	-21	NA	72105887	72102543	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_72102904_72104602_72104700_72104963_72105042_72105786
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025387	chr11	-	3319	12	FSM	ENSMUSG00000020805.15	ENSMUST00000021161.14	3329	12	5	5	5	-5	multi-exon	FALSE	canonical	3	36	junction_1	6.58196885814471	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGGTGCCTGGCCTT	NA	False	NA	-5	True	AATAAA	-18	NA	72157480	72132819	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_72134463_72135951_72136090_72138492_72138655_72141551_72141671_72143083_72143185_72144009_72144229_72148185_72148309_72149783_72149953_72151020_72151209_72152438_72152576_72152848_72152978_72157289
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025391	chr11	-	138	1	Intergenic	novelGene_792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTGTCTGTTCATGAT	NA	False	NA	NA	False	NA	NA	NA	72182928	72182790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_72182800_72182900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025397	chr11	+	214	1	Intergenic	novelGene_793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGAAAGTGAGCTG	NA	False	NA	NA	False	NA	NA	NA	72189213	72189427	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_72189200_72189400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025413	chr11	-	3617	8	FSM	ENSMUSG00000045667.15	ENSMUST00000108500.8	3572	8	-42	-3	-40	3	multi-exon	FALSE	canonical	3	500	junction_3	27.0237990350305	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGGTGGTACTCATTTG	NA	False	NA	-3	True	ATTAAA	-18	NA	72302579	72279986	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_72282240_72290699_72290852_72291154_72291273_72292173_72292354_72293250_72293327_72293836_72294077_72294742_72294831_72302069
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025425	chr11	+	4407	26	FSM	ENSMUSG00000040463.17	ENSMUST00000045633.6	4358	26	-45	-4	-45	4	multi-exon	FALSE	canonical	3	2354	junction_12	204.057066527969	1707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGACCTGGTTCTTGT	NA	False	NA	23	True	AATAAA	-36	NA	72332135	72342598	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025458	chr11	+	4328	25	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-7	-213	intron_retention	FALSE	canonical	3	2354	junction_11	204.801186621725	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCAATCTCTGACTCAACC	NA	False	NA	51	True	AATAAA	-21	NA	72332195	72342381	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025493	chr11	+	192	1	Intergenic	novelGene_794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATACTATTCTATGCCT	NA	False	NA	NA	False	NA	NA	NA	72569744	72569936	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_72569700_72569900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025504	chr11	+	6972	24	NIC	ENSMUSG00000020790.15	novel	8030	25	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	3	78	junction_3	29.9114003593208	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAGTGTAAACTTTAAT	NA	False	NA	19	True	AATAAA	-20	NA	72580831	72662050	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_72580861_72602982_72603176_72605190_72605310_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025508	chr11	+	7108	25	FSM	ENSMUSG00000020790.15	ENSMUST00000155998.2	8030	25	0	922	0	3	multi-exon	FALSE	canonical	0	0	junction_4	42.0138659320415	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAGTGTAAACTTTAAT	NA	False	NA	19	True	AATAAA	-20	NA	72580831	72662050	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_72580861_72602982_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025517	chr11	+	4592	22	FSM	ENSMUSG00000020788.16	ENSMUST00000021142.8	4593	22	2	-1	2	0	multi-exon	FALSE	canonical	3	72	junction_1	15.8513502933488	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTAGTCTTTTCTGAGC	NA	False	NA	23	True	AATAAA	-23	NA	72851996	72883870	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_72852298_72861421_72861440_72861673_72861757_72862970_72863076_72863228_72863368_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72880300_72880374_72882514
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025527	chr11	+	4588	22	FSM	ENSMUSG00000020788.16	ENSMUST00000163326.8	4606	22	19	-1	19	0	multi-exon	FALSE	canonical	3	16	junction_21	23.72461048905	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTAGTCTTTTCTGAGC	NA	False	NA	23	True	AATAAA	-23	NA	72852013	72883870	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_72852298_72861421_72861440_72861673_72861757_72862970_72863076_72863228_72863368_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72880300_72880387_72882514
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025528	chr11	+	4502	21	FSM	ENSMUSG00000020788.16	ENSMUST00000108485.9	4520	21	19	-1	19	0	multi-exon	FALSE	canonical	3	12	junction_20	24.9797918325994	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTAGTCTTTTCTGAGC	NA	False	NA	23	True	AATAAA	-23	NA	72852013	72883870	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_72852298_72861421_72861440_72861673_72861757_72862970_72863076_72863228_72863368_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72882514
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025547	chr11	+	2920	13	FSM	ENSMUSG00000020783.15	ENSMUST00000021135.5	12106	13	86	9100	-1	-9100	multi-exon	FALSE	canonical	3	251	junction_10	28.6544305280857	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGTGTCTCTGACTTA	NA	False	NA	11	True	NA	NA	NA	72938694	72971043	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_72938909_72940684_72940751_72944248_72944355_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72961623_72961728_72964051_72964347_72966440_72966596_72968680_72968843_72969766
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025557	chr11	+	188	1	Intergenic	novelGene_795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1421	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTCCAGTGTTAGTGCT	7433	False	NA	NA	False	AAGAAA	-1	NA	73017243	73017431	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_73017200_73017400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025575	chr11	+	167	1	Intergenic	novelGene_796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGAGAGGTGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	73030089	73030256	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_73030100_73030300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025581	chr11	-	1334	2	FSM	ENSMUSG00000047260.5	ENSMUST00000054952.4	1332	2	0	-2	0	2	multi-exon	FALSE	canonical	3	946	junction_1	0	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGCGCATGGAATTTGTA	NA	False	NA	-25	True	AATAAA	-27	NA	73067863	73066342	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_73067578_73067764
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025598	chr11	-	2567	11	FSM	ENSMUSG00000005949.10	ENSMUST00000006103.9	2570	11	3	0	3	0	multi-exon	FALSE	canonical	3	46	junction_10	9.23525852372309	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCGGAACGTTTACTAGA	4468	False	NA	0	True	ATTAAA	-24	NA	73089865	73074421	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73089743
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025619	chr11	+	5447	26	FSM	ENSMUSG00000020741.18	ENSMUST00000092915.12	5379	26	-67	-1	-47	1	multi-exon	TRUE	canonical	0	0	junction_12	69.5319897601097	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCAGCCTTTCCTGTGTG	NA	False	NA	27	True	AATAAA	-21	NA	74540273	74561674	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025639	chr11	-	5527	11	FSM	ENSMUSG00000020745.16	ENSMUST00000021091.15	5803	11	278	-2	-57	2	multi-exon	FALSE	canonical	3	936	junction_5	79.0964600977819	428	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTGGGGTTTTTTTCAA	NA	False	NA	NA	False	ATTAAA	-17	NA	74615218	74564772	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025651	chr11	+	203	1	Intergenic	novelGene_797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	279	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATAAAATAAACTGCCA	NA	False	NA	NA	False	NA	NA	NA	74600696	74600899	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_74600700_74600900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025661	chr11	-	226	1	Intergenic	novelGene_798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAAAAAAAAATTGGTG	NA	False	NA	NA	False	AATAAA	-21	NA	74609106	74608880	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_74608900_74609100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025668	chr11	+	138	1	Intergenic	novelGene_799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTTCCTTTTGATTTTA	NA	False	NA	6	True	AATAAA	-25	NA	74619566	74619704	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_74619600_74619700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025671	chr11	+	187	1	Intergenic	novelGene_800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGATGAGGCAAAAGGATT	NA	False	NA	NA	False	NA	NA	NA	74648439	74648626	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_74648400_74648600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025679	chr11	+	2754	10	FSM	ENSMUSG00000010554.15	ENSMUST00000141755.8	12584	10	-1	9831	-1	800	multi-exon	FALSE	canonical	3	325	junction_5	30.3892443611141	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATCCTGTTTGAATCCTG	8493	False	NA	104	True	AATATA	-22	NA	74661654	74709520	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025710	chr11	-	4788	23	FSM	ENSMUSG00000038351.15	ENSMUST00000057631.12	4743	23	-46	1	-46	-1	multi-exon	TRUE	canonical	3	35	junction_12	13.4016928744404	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCTCTGATGGCTATTT	NA	False	NA	-4	True	AATAAA	-18	NA	74787932	74740087	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74755910_74756038_74756186_74756348_74757394_74757463_74757856_74757982_74758436_74758572_74758806_74758953_74759049_74759118_74759402_74759565_74759840_74760004_74782821_74782898_74787650
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025722	chr11	-	237	1	Intergenic	novelGene_801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTACCGTGTGAGGCCTG	104	False	NA	NA	False	NA	NA	NA	74770623	74770386	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_74770400_74770600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025727	chr11	+	3408	15	FSM	ENSMUSG00000038335.14	ENSMUST00000045807.14	3389	15	-17	-2	-10	2	multi-exon	FALSE	canonical	3	655	junction_8	75.3882467968452	542	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTGGATTCTAGTAAT	NA	False	NA	28	True	AATAAA	-20	NA	74788886	74800170	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025745	chr11	+	5876	19	FSM	ENSMUSG00000038290.16	ENSMUST00000045281.13	5848	19	-28	0	-28	0	multi-exon	FALSE	canonical	3	122	junction_1	11.7104996677826	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACCTCTGCTGGTCTATT	NA	False	NA	NA	False	AATAAA	-21	NA	74816620	75055274	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_74816830_74819818_74821575_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74836347_74836459_74836832_74837046_74872677_74872740_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025761	chr11	+	151	1	Intergenic	novelGene_802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGAGCACTTTACATTAA	NA	False	NA	NA	False	NA	NA	NA	74871810	74871961	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_74871800_74872000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025781	chr11	-	3642	13	FSM	ENSMUSG00000078789.10	ENSMUST00000044949.11	2139	13	39	-1542	39	1542	multi-exon	FALSE	canonical	3	189	junction_12	23.7876893931854	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTGGTCTATTTGCTTT	NA	False	NA	-17	True	TATAAA	-1	NA	75081306	75066926	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081224
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025782	chr11	-	2491	2	FSM	ENSMUSG00000038268.5	ENSMUST00000071562.3	2670	2	20	159	20	-159	multi-exon	FALSE	canonical	3	105	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTGGTCTATTTGCTTT	1657	False	NA	-17	True	TATAAA	-1	NA	75069641	75066926	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_75069214_75069437
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025796	chr11	+	3496	2	FSM	ENSMUSG00000045287.7	ENSMUST00000102514.4	3525	2	29	0	29	0	multi-exon	FALSE	canonical	3	24	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTTTTTTATTTCCTAA	NA	False	NA	8	True	AATAAA	-19	NA	75084637	75158595	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_75085121_75155582
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025809	chr11	-	2995	17	FSM	ENSMUSG00000000751.14	ENSMUST00000092907.12	5077	17	-24	2106	-24	78	multi-exon	FALSE	canonical	3	1486	junction_1	165.245638652734	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTTAACTCATTACAGAC	NA	False	NA	-6	True	AATAAA	-16	NA	75239174	75191097	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025818	chr11	-	2508	2	ISM	ENSMUSG00000000751.14	ENSMUST00000154894.2	716	7	27493	81	21386	-81	3prime_fragment	FALSE	canonical	3	1717	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCGTACCAGTCCAAGTGA	NA	False	NA	NA	False	NA	NA	NA	75211628	75206946	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_-_75207064_75209237
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025827	chr11	+	184	1	Intergenic	novelGene_803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGTTTTGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	75299786	75299970	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_75299800_75300000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025839	chr11	-	5228	6	ISM	ENSMUSG00000045374.19	ENSMUST00000173320.8	6908	10	33	6405	33	818	5prime_fragment	FALSE	canonical	2	11	junction_3	4.04969134626332	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTTTGTTTTTGTTA	2842	False	NA	NA	False	NA	NA	NA	75345510	75338174	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_-_75338856_75338948_75339115_75339850_75340042_75340171_75340363_75340621_75340730_75341619
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025844	chr11	+	185	1	Intergenic	novelGene_804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAGAAAGGGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	75347021	75347206	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_75347000_75347200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025859	chr11	-	183	1	Intergenic	novelGene_805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATTTAAAAAAAGTGTTC	NA	False	NA	NA	False	NA	NA	NA	75366919	75366736	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_75366700_75366900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025866	chr11	+	194	1	Intergenic	novelGene_806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTACTTATTTTATGT	NA	False	NA	NA	False	NA	NA	NA	75369383	75369577	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_75369400_75369600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025869	chr11	-	187	1	Intergenic	novelGene_807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTATTTATTTATTTTA	NA	False	NA	NA	False	NA	NA	NA	75369754	75369567	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_75369600_75369800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025878	chr11	+	7460	42	FSM	ENSMUSG00000020850.15	ENSMUST00000018449.11	7442	42	-17	-1	-17	1	multi-exon	FALSE	canonical	3	217	junction_5	157.019499238112	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTCTTGCTGTTAT	NA	False	NA	19	True	AATAAA	-16	NA	75377624	75400274	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_75378018_75378450_75378620_75380567_75380733_75380823_75381043_75381154_75381368_75381466_75381593_75381672_75381779_75382268_75382460_75382584_75382705_75382787_75382978_75383088_75383209_75383322_75383458_75383804_75383935_75384176_75384374_75384639_75384847_75384963_75385128_75385253_75385381_75385499_75385693_75386059_75386248_75386407_75386647_75386855_75387003_75387166_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75391474_75391591_75391762_75391894_75392025_75392143_75392291_75392596_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025891	chr11	+	187	1	Intergenic	novelGene_808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATCTTTGGCCGGGCAGT	2785	False	NA	NA	False	NA	NA	NA	75418433	75418620	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_75418400_75418600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025893	chr11	+	3114	14	FSM	ENSMUSG00000038178.17	ENSMUST00000108433.8	3236	14	22	100	22	-100	multi-exon	FALSE	canonical	2	8	junction_1	9.5805522935017	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCCTCCTCACGTATCAG	6897	False	NA	21	True	AATAAA	-24	NA	75422545	75464609	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_75422605_75423413_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025906	chr11	+	183	1	Intergenic	novelGene_809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTGTTTTTTGTTA	4986	False	NA	NA	False	NA	NA	NA	75473185	75473368	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_75473200_75473400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025929	chr11	+	199	1	Intergenic	novelGene_810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTGTGAGCCACCATG	3574	False	NA	NA	False	NA	NA	NA	75537066	75537265	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_75537100_75537300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025934	chr11	+	182	1	Intergenic	novelGene_811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGTTCAAAACTA	7271	False	NA	NA	False	NA	NA	NA	75540763	75540945	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_75540800_75540900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025944	chr11	+	4626	32	FSM	ENSMUSG00000017774.20	ENSMUST00000102505.10	4652	32	26	0	26	0	multi-exon	FALSE	canonical	3	31	junction_1	55.4580209849872	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTCTTCCTGTGAGTGT	7863	False	NA	15	True	AATAAA	-19	NA	75541355	75564736	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_75541591_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025968	chr11	+	213	1	Intergenic	novelGene_812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCAGTTCTAGACTTCAT	1609	False	NA	NA	False	NA	NA	NA	75565268	75565481	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_75565300_75565500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000025999	chr11	+	204	1	Intergenic	novelGene_813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTGAGGAATGGGCATC	5314	False	NA	NA	False	NA	NA	NA	75582446	75582650	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_75582400_75582600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026003	chr11	+	2122	6	FSM	ENSMUSG00000020849.14	ENSMUST00000067664.10	2100	6	-15	-7	-15	7	multi-exon	FALSE	canonical	3	8977	junction_5	918.346862574267	3968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGGATCATTTTCTAATG	2976	False	NA	33	True	ATTAAA	-29	NA	75623679	75656678	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_75623918_75642706_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026012	chr11	+	1551	5	FSM	ENSMUSG00000020849.14	ENSMUST00000134745.8	599	5	3	-955	3	-267	multi-exon	FALSE	canonical	0	0	junction_3	4641.68485035337	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCATGCCTCCATCCTT	3038	False	NA	16	True	NA	NA	NA	75623741	75656404	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_75623918_75642706_75642907_75646399_75646479_75650117_75650255_75655445
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026020	chr11	+	201	1	Intergenic	novelGene_814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACTTTGATGTTTTACC	5434	False	NA	NA	False	NA	NA	NA	75636527	75636728	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_75636500_75636700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026033	chr11	+	223	1	Intergenic	novelGene_815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTCAGTGTCTGGTACT	NA	False	NA	NA	False	NA	NA	NA	75678577	75678800	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_75678600_75678800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026047	chr11	-	210	1	Intergenic	novelGene_816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTACAAATAATTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	75887455	75887245	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_75887200_75887500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026052	chr11	+	194	1	Intergenic	novelGene_817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	75888395	75888589	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_75888400_75888600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026076	chr11	+	191	1	Intergenic	novelGene_818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATTTAGAAACCAACAGG	6862	False	NA	NA	False	NA	NA	NA	76018996	76019187	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_76019000_76019200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026079	chr11	+	187	1	Intergenic	novelGene_819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTGAGTGTGACAAGAAA	NA	False	NA	NA	False	NA	NA	NA	76040659	76040846	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_76040700_76040800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026095	chr11	+	192	1	Intergenic	novelGene_820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATCCCTAAGAGTCTTC	NA	False	NA	NA	False	NA	NA	NA	76068606	76068798	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_76068600_76068800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026103	chr11	+	2130	5	FSM	ENSMUSG00000069808.14	ENSMUST00000094014.10	2130	5	-1	1	-1	-1	multi-exon	FALSE	canonical	3	42	junction_2	6.18465843842649	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTTATGTGCCCTGGC	3405	False	NA	NA	False	ATTAAA	-16	NA	76092839	76100241	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_76093082_76093377_76093462_76096079_76096282_76097953_76098050_76098735
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026111	chr11	-	3477	2	FSM	ENSMUSG00000049396.7	ENSMUST00000102500.5	3540	2	63	0	63	0	multi-exon	FALSE	canonical	3	437	junction_1	0	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGCCTTTCTCAGAAG	NA	False	NA	-1	True	AATAAA	-22	NA	76108427	76101396	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_76104750_76108303
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026122	chr11	-	2527	9	FSM	ENSMUSG00000017286.16	ENSMUST00000017430.12	1434	9	26	-1119	-24	1119	multi-exon	FALSE	canonical	3	653	junction_6	49.1602926659311	233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGAATAGGTAAACTGCT	NA	False	NA	2	True	NA	NA	NA	76134525	76111216	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134380
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026154	chr11	+	197	1	Intergenic	novelGene_821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATCTTCCCATCGGAGT	NA	False	NA	NA	False	NA	NA	NA	76291782	76291979	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_76291800_76292000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026171	chr11	+	214	1	Intergenic	novelGene_822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	515	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTTGTATGGGTGTTTT	NA	False	NA	NA	False	AAAAAG	-5	NA	76302252	76302466	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_76302300_76302500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026183	chr11	-	6144	24	NNC	ENSMUSG00000017631.20	novel	6271	23	NA	NA	-203	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_23	55.4650727135133	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCATGGTGTGGTTGTTT	NA	False	NA	-1	True	AATAAA	-36	NA	76514587	76307559	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76513002_76514161_76514490
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026184	chr11	-	5275	23	FSM	ENSMUSG00000017631.20	ENSMUST00000072740.13	5394	23	119	0	119	0	multi-exon	FALSE	canonical	3	154	junction_22	28.8783427101686	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCATGGTGTGGTTGTTT	6238	False	NA	-1	True	AATAAA	-36	NA	76462242	76307559	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76461856
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026207	chr11	+	199	1	Intergenic	novelGene_823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATGGAGAAAAGGAAAGGT	NA	False	NA	NA	False	NA	NA	NA	76366858	76367057	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_76366900_76367100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026213	chr11	+	396	1	FSM	ENSMUSG00000024205.8	ENSMUST00000136893.3	311	1	-35	-50	-35	50	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGGACCTCACCTGTAGC	NA	False	NA	NA	False	AATAAA	-35	NA	76492109	76492505	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_76492100_76492500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026218	chr11	-	209	1	Intergenic	novelGene_824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTTTATGTGTATAAGTG	1935	False	NA	NA	False	NA	NA	NA	76526181	76525972	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_76526000_76526200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026225	chr11	+	210	1	Intergenic	novelGene_825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGCACAATGCTAGACAG	NA	False	NA	NA	False	NA	NA	NA	76575406	76575616	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_76575400_76575600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026233	chr11	-	4292	9	FSM	ENSMUSG00000010392.9	ENSMUST00000010536.9	4289	9	-1	-2	-1	2	multi-exon	FALSE	canonical	3	228	junction_2	27.7778576387741	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTTTGGTTATCTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	76654406	76617425	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_76621060_76625394_76625478_76628207_76628238_76639333_76639409_76641636_76641729_76645194_76645303_76645538_76645627_76652060_76652182_76654345
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026254	chr11	-	189	1	Intergenic	novelGene_826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTCAAAGTTCAAGGGTT	NA	False	NA	-1	True	NA	NA	NA	76813417	76813228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_76813200_76813400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026261	chr11	+	2349	12	FSM	ENSMUSG00000020840.11	ENSMUST00000021197.10	2497	12	152	-4	-73	4	multi-exon	FALSE	canonical	3	631	junction_4	56.5853410915431	642	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGCGTGTCTGGTCTGTA	NA	False	NA	34	True	AATAAA	-23	NA	76836481	76878209	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_76836720_76837067_76837266_76840785_76840896_76841869_76842012_76843326_76843416_76845335_76845429_76856640_76856797_76857557_76857717_76857819_76857888_76859428_76859547_76862734_76862805_76877301
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026278	chr11	-	3116	7	FSM	ENSMUSG00000037958.14	ENSMUST00000102494.8	3114	7	-2	0	-2	0	multi-exon	FALSE	canonical	3	222	junction_6	27.2457947825593	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGACATCCTGTAAATTTA	NA	False	NA	-5	True	AATAAA	-28	NA	76969263	76935117	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_76937581_76939178_76939288_76940098_76940307_76941409_76941539_76945769_76945827_76967479_76967571_76969204
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026295	chr11	+	212	1	Intergenic	novelGene_827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGATGTATGTACATGT	NA	False	NA	NA	False	TTTAAA	-5	NA	77246440	77246652	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_77246400_77246700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026297	chr11	+	193	1	Intergenic	novelGene_828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAGCTACTCCAGCTTGT	NA	False	NA	NA	False	NA	NA	NA	77280601	77280794	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_77280600_77280800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026312	chr11	+	3757	19	FSM	ENSMUSG00000011877.14	ENSMUST00000100812.4	3476	19	-283	2	-274	-2	multi-exon	TRUE	canonical	3	379	junction_15	38.5310921429486	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTGGAGGTGGGGCTTA	NA	False	NA	28	True	AATAAA	-31	NA	77384113	77398610	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026323	chr11	-	220	1	Intergenic	novelGene_829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACTAGGCCAGCAAAGGG	NA	False	NA	NA	False	AAGAAA	-20	NA	77387736	77387516	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_77387500_77387700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026331	chr11	-	1391	7	FSM	ENSMUSG00000044328.14	ENSMUST00000060417.11	1463	7	70	2	70	-2	multi-exon	FALSE	canonical	3	152	junction_1	13.984117975602	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCGTTGGGAGATTGTCT	NA	False	NA	-1	True	ATTAAA	-19	NA	77404126	77398926	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_77399204_77399282_77399818_77399901_77400100_77400423_77400553_77403478_77403521_77403722_77403792_77403985
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026341	chr11	-	1459	6	NIC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	77	-6	intron_retention	FALSE	canonical	3	179	junction_5	7.1386273190299	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGAGTCGTTGGGAGATT	NA	False	NA	-5	True	ATTAAA	-15	NA	77404119	77398930	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_77399818_77399901_77400100_77400423_77400553_77403478_77403521_77403722_77403792_77403985
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026355	chr11	+	193	1	Intergenic	novelGene_830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGTTATTCTTGCTGGC	NA	False	NA	NA	False	NA	NA	NA	77436673	77436866	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_77436700_77436900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026360	chr11	+	202	1	Intergenic	novelGene_831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAGGAGAAAGCCTGGTG	NA	False	NA	NA	False	NA	NA	NA	77490149	77490351	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_77490100_77490400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026371	chr11	+	185	1	Intergenic	novelGene_832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGAATAACTCAAGGGTA	4488	False	NA	NA	False	NA	NA	NA	77511809	77511994	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_77511800_77512000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026379	chr11	+	209	1	Intergenic	novelGene_833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTTTGCTCTGAAAAAAAA	9721	False	NA	NA	False	NA	NA	NA	77530906	77531115	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_77530900_77531100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026390	chr11	+	215	1	Intergenic	novelGene_834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGGTGACAGATTATGA	NA	False	NA	NA	False	NA	NA	NA	77543236	77543451	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_77543200_77543500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026395	chr11	+	266	1	Intergenic	novelGene_835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAAGTCTCTTGGTTATT	NA	False	NA	NA	False	ACTAAA	-6	NA	77554181	77554447	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_77554200_77554400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026401	chr11	+	192	1	Intergenic	novelGene_836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAATTTATTAAATATAT	NA	False	NA	NA	False	NA	NA	NA	77564836	77565028	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_77564800_77565000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026409	chr11	+	5175	4	FSM	ENSMUSG00000037857.17	ENSMUST00000100802.11	5158	4	-17	0	-17	0	multi-exon	FALSE	canonical	3	165	junction_1	19.0146142626022	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTTCTGATTTTTTGT	NA	False	NA	17	True	ATTAAA	-18	NA	77576963	77603567	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_77577334_77582367_77584081_77596334_77596368_77600508
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026419	chr11	+	7490	41	NIC	ENSMUSG00000000631.21	novel	7513	42	NA	NA	18	7	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	17.6113422259634	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGCCTCTCCTTGCAG	NA	False	NA	26	True	AATAAA	-27	NA	77654089	77756813	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_77654206_77668060_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026434	chr11	-	1738	8	FSM	ENSMUSG00000017453.5	ENSMUST00000017597.5	1998	8	261	-1	261	1	multi-exon	FALSE	canonical	3	213	junction_3	30.9654184996286	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCGGTGGTCTTTATTTT	NA	False	NA	-1	True	AATAAA	-23	NA	77784661	77771439	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_77772081_77772326_77772403_77772943_77773103_77773442_77773590_77773954_77774138_77774604_77774819_77782937_77783087_77784492
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026454	chr11	+	193	1	Intergenic	novelGene_837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTGGCTGATCTTCCA	6829	False	NA	NA	False	NA	NA	NA	77809258	77809451	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_77809300_77809500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026476	chr11	+	200	1	Intergenic	novelGene_838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGGGAAAGAAGGCACCA	NA	False	NA	NA	False	NA	NA	NA	77916006	77916206	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_77916000_77916200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026483	chr11	+	1738	5	FSM	ENSMUSG00000020834.18	ENSMUST00000021187.12	1779	5	39	2	-30	0	multi-exon	FALSE	canonical	3	80	junction_1	5.93190525885234	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCTCTGGCTCCCGCCTC	NA	False	NA	3	True	AATAAA	-15	NA	77923144	77928690	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_77923325_77923410_77923530_77924838_77924963_77925100_77925413_77927687
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026486	chr11	+	2637	11	FSM	ENSMUSG00000061981.15	ENSMUST00000072289.12	2621	11	-15	-1	-15	1	multi-exon	FALSE	canonical	3	351	junction_3	23.4778619128744	249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATCGTATATTCTGTG	NA	False	NA	22	True	AATAAA	-19	NA	77928741	77951261	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_77928939_77940303_77940386_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026503	chr11	-	225	1	Intergenic	novelGene_839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGCACTCGGGAGGCCG	NA	False	NA	NA	False	AAAACA	-29	NA	77939629	77939404	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_77939400_77939600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026507	chr11	-	2014	10	FSM	ENSMUSG00000020832.15	ENSMUST00000021183.4	2014	10	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_8	16.2890556304942	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATCTTTTATTTCTTT	NA	False	NA	-2	True	AATAAA	-22	NA	77971209	77964201	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_77965001_77965105_77965187_77965303_77965454_77966216_77966466_77966547_77966661_77966815_77966878_77967058_77967106_77968642_77968721_77969087_77969216_77970902
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026522	chr11	+	196	1	Intergenic	novelGene_840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGCCGGGCGTGGTGGTG	NA	False	NA	NA	False	NA	NA	NA	77967268	77967464	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_77967300_77967500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026527	chr11	+	221	1	Intergenic	novelGene_841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGTAAGGGTAGGTTGAGA	NA	False	NA	NA	False	NA	NA	NA	77972417	77972638	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_77972400_77972600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026535	chr11	-	189	1	Intergenic	novelGene_842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	439	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTAGGGGGTCTAGGTCC	NA	False	NA	NA	False	NA	NA	NA	77977890	77977701	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_77977700_77977900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026556	chr11	+	3872	3	FSM	ENSMUSG00000037750.17	ENSMUST00000073705.12	3258	3	30	-644	-18	644	multi-exon	FALSE	canonical	3	80	junction_2	31	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTTTTTTTTTTACCTT	2628	False	NA	NA	False	AGTAAA	-15	NA	77985515	78048170	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_77985618_78033918_78034041_78044522
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026565	chr11	-	4131	7	FSM	ENSMUSG00000017386.11	ENSMUST00000017530.4	2078	7	0	-2053	0	1152	multi-exon	FALSE	canonical	3	457	junction_4	31.7525152109596	490	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGGTTGGTGTGTTTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	78056415	78048172	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_78051375_78051618_78051775_78051858_78052021_78052112_78052275_78052343_78052449_78053207_78053260_78056123
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026614	chr11	+	192	1	Intergenic	novelGene_843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCATGTAGTTCTCTTTCA	2523	False	NA	NA	False	NA	NA	NA	78075753	78075945	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_78075800_78075900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026626	chr11	+	1711	10	FSM	ENSMUSG00000002059.19	ENSMUST00000108322.9	1685	10	-21	-5	-21	0	multi-exon	FALSE	canonical	3	127	junction_1	10.0443461155462	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTCTTTAAAGATTTA	6353	False	NA	26	True	ATTAAA	-20	NA	78079583	78083019	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_78080217_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400_78082509_78082599
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026636	chr11	-	181	1	Intergenic	novelGene_844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAAATGCTAAT	NA	False	NA	NA	False	NA	NA	NA	78083208	78083027	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_78083000_78083200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026653	chr11	+	213	1	Intergenic	novelGene_845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGCCAATTAAATCTG	NA	False	NA	NA	False	NA	NA	NA	78130275	78130488	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_78130300_78130500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026670	chr11	+	207	1	Intergenic	novelGene_846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTATTACAGATGGTTG	NA	False	NA	NA	False	NA	NA	NA	78143683	78143890	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_78143700_78143900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026676	chr11	-	233	1	Intergenic	novelGene_847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCATATTTAAACACAGTTT	9950	False	NA	NA	False	NA	NA	NA	78150969	78150736	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_78150700_78151000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026696	chr11	+	3828	24	FSM	ENSMUSG00000002055.10	ENSMUST00000045026.4	3887	24	57	2	-38	-2	multi-exon	FALSE	canonical	3	128	junction_10	25.9765053072448	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCCAGTCCACTGAATC	2809	False	NA	6	True	AATAAA	-16	NA	78192411	78213281	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204474_78204645_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026707	chr11	+	200	1	Intergenic	novelGene_848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGACATGGTGTGCGTGAG	8130	False	NA	NA	False	NA	NA	NA	78202943	78203143	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_78202900_78203100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026722	chr11	+	202	1	Intergenic	novelGene_849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGACATTAGAAAACTT	NA	False	NA	NA	False	NA	NA	NA	78218687	78218889	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_78218700_78218900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026724	chr11	+	2481	12	FSM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	20	0	20	0	multi-exon	FALSE	canonical	3	513	junction_10	36.2694234084327	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCATAACTCGTTCTTGT	NA	False	NA	28	True	NA	NA	NA	78219260	78233608	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_78219335_78219557_78219698_78219800_78219913_78223775_78223866_78224492_78224585_78226252_78226461_78227513_78227657_78228614_78228730_78230168_78230315_78230834_78230936_78232050_78232262_78232559
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026731	chr11	+	2334	11	NIC	ENSMUSG00000041958.11	novel	2501	12	NA	NA	23	-4	combination_of_known_splicesites	FALSE	canonical	3	77	junction_1	151.766300607216	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGACCATAACTCGTTC	NA	False	NA	24	True	NA	NA	NA	78219263	78233604	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_78219335_78219800_78219913_78223775_78223866_78224492_78224585_78226252_78226461_78227513_78227657_78228614_78228730_78230168_78230315_78230834_78230936_78232050_78232262_78232559
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026757	chr11	+	1968	5	FSM	ENSMUSG00000020829.10	ENSMUST00000001126.4	1978	5	8	2	8	-2	multi-exon	FALSE	canonical	3	60	junction_1	12.7549010188241	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGGCTTTGGGGCTTTC	8345	False	NA	24	True	AGTAAA	-25	NA	78356530	78362769	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_78356832_78357176_78358030_78359450_78359535_78361520_78361678_78362196
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026768	chr11	-	2419	4	FSM	ENSMUSG00000050132.14	ENSMUST00000153534.2	2497	4	0	78	0	0	multi-exon	FALSE	canonical	3	65	junction_3	7.78888096369861	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATGTCTGTCTTCAGTC	4413	False	NA	-2	True	AATACA	-20	NA	78374624	78364116	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_78365859_78366032_78366155_78373982_78374173_78374259
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026775	chr11	-	1527	5	NIC	ENSMUSG00000051232.14	novel	1347	6	NA	NA	41	0	intron_retention	FALSE	canonical	3	479	junction_4	36.9425229241318	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATCTTTGGTCTTAAA	1672	False	NA	-29	True	AATAAA	-21	NA	78402957	78397880	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_78398632_78399144_78399522_78400550_78400641_78401173_78401248_78402722
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026783	chr11	-	1324	6	FSM	ENSMUSG00000051232.14	ENSMUST00000052566.8	1347	6	23	0	23	0	multi-exon	FALSE	canonical	3	479	junction_5	35.6561355169065	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATCTTTGGTCTTAAA	1654	False	NA	-29	True	AATAAA	-21	NA	78402975	78397880	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_78398632_78399144_78399258_78399478_78399522_78400550_78400641_78401173_78401248_78402722
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026810	chr11	-	3596	7	FSM	ENSMUSG00000017615.13	ENSMUST00000017759.9	3720	7	69	55	69	-55	multi-exon	FALSE	canonical	3	43	junction_6	46.4997013132582	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTTTCCAGTGAGCAG	NA	False	NA	-41	True	AATAAA	-19	NA	78427028	78413730	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426898
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026825	chr11	+	1063	6	FSM	ENSMUSG00000001105.16	ENSMUST00000128788.8	1141	6	61	17	-6	-17	multi-exon	FALSE	canonical	3	238	junction_1	100.921751867474	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTTTCTTCTATGG	NA	False	NA	7	True	AATAAA	-16	NA	78427247	78432546	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_78427403_78429335_78429565_78429659_78429789_78430785_78430872_78431720_78431825_78432186
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026832	chr11	+	824	5	FSM	ENSMUSG00000001105.16	ENSMUST00000108275.2	582	5	-11	-231	4	-17	multi-exon	FALSE	canonical	3	256	junction_1	91.1125677390337	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTTTCTTCTATGG	NA	False	NA	7	True	AATAAA	-16	NA	78427257	78432546	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_78427403_78429659_78429789_78430785_78430872_78431720_78431825_78432186
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026858	chr11	-	4547	11	FSM	ENSMUSG00000017376.16	ENSMUST00000142739.8	4444	11	-103	0	-103	0	multi-exon	TRUE	canonical	3	79	junction_6	8.57962703152066	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTCGCTGTCTTATTTCC	NA	False	NA	-1	True	ATTAAA	-19	NA	78588302	78457993	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_78459802_78462296_78462391_78463058_78463258_78465666_78465754_78474148_78474251_78477694_78477905_78480130_78480217_78481708_78481816_78509100_78509157_78517402_78517533_78586634
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026871	chr11	+	267	1	Intergenic	novelGene_850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTATTTAATAAACATAAAA	NA	False	NA	NA	False	TTTAAA	-2	NA	78465082	78465349	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_78465100_78465300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026875	chr11	-	184	1	Intergenic	novelGene_851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACACACAAAGAAAAGGG	NA	False	NA	NA	False	NA	NA	NA	78596435	78596251	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_78596300_78596400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026884	chr11	-	1182	1	FSM	ENSMUSG00000049489.6	ENSMUST00000059468.6	1224	1	42	0	42	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTCTGCCTTATGGTA	6637	False	NA	-2	True	AATAAA	-37	NA	78642513	78641331	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_78641300_78642500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026901	chr11	-	199	1	Intergenic	novelGene_852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCTTTAAAAAAAAATACTAA	NA	False	NA	NA	False	NA	NA	NA	78872527	78872328	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_78872300_78872500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026910	chr11	-	179	1	Intergenic	novelGene_853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATTATTTTTAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	78895607	78895428	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_78895400_78895600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026924	chr11	-	2471	9	FSM	ENSMUSG00000017677.12	ENSMUST00000017821.12	2476	9	-6	11	-6	5	multi-exon	FALSE	canonical	3	217	junction_4	86.5338625914734	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCCGATATTTCTTTCA	969	False	NA	-19	True	ATTAAA	-17	NA	79145503	79130208	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79132983_79135288_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026955	chr11	+	198	1	Intergenic	novelGene_854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTTTTTTTCTTTTTTGG	NA	False	NA	NA	False	NA	NA	NA	79184139	79184337	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_79184100_79184300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026966	chr11	-	194	1	Intergenic	novelGene_855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTATTGATTTGTTT	NA	False	NA	NA	False	NA	NA	NA	79216222	79216028	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_79216000_79216200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026970	chr11	+	194	1	Intergenic	novelGene_856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTATCTGGAAGATTGC	NA	False	NA	NA	False	NA	NA	NA	79243197	79243391	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_79243200_79243400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026980	chr11	-	220	1	Intergenic	novelGene_857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	588	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTAAATTTTTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	79276661	79276441	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_79276400_79276700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026992	chr11	+	174	1	Intergenic	novelGene_858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAGGATCAACTGA	3808	False	NA	NA	False	NA	NA	NA	79280589	79280763	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_79280600_79280800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000026997	chr11	+	173	1	Intergenic	novelGene_859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATACGGGGGAAAAAGGTAA	3122	False	NA	NA	False	NA	NA	NA	79415801	79415974	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_79415800_79416000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027021	chr11	-	216	1	Intergenic	novelGene_860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCCCTATTGAGCATGC	NA	False	NA	NA	False	NA	NA	NA	79606898	79606682	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_79606700_79606900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027027	chr11	+	190	1	Intergenic	novelGene_861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGGGATATCGTTCCCA	NA	False	NA	NA	False	NA	NA	NA	79734635	79734825	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_79734600_79734800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027034	chr11	+	200	1	Intergenic	novelGene_862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATATAATCGAAGTCTAAA	NA	False	NA	NA	False	AAGAAA	-3	NA	79818663	79818863	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_79818700_79818900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027040	chr11	-	3908	19	FSM	ENSMUSG00000035575.12	ENSMUST00000043152.6	3877	19	-31	0	-31	0	multi-exon	FALSE	canonical	3	409	junction_5	33.8632416611651	377	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGAGAATGTTAATCTT	NA	False	NA	-14	True	NA	NA	NA	79853247	79824778	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79853043
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027049	chr11	+	189	1	Intergenic	novelGene_863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCCACCTTTCTTATC	NA	False	NA	NA	False	NA	NA	NA	79827897	79828086	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_79827900_79828100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027061	chr11	+	189	1	Intergenic	novelGene_864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTCTGACTTTCACAGG	NA	False	NA	NA	False	NA	NA	NA	79828819	79829008	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_79828800_79829000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027073	chr11	+	163	1	Intergenic	novelGene_865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAAAACATTTAATAGT	NA	False	NA	NA	False	NA	NA	NA	79863164	79863327	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_79863200_79863300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027078	chr11	-	2225	3	Intergenic	novelGene_866	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	31	junction_1	36.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTATTTATTTATTTTAT	NA	False	NA	-1	True	ATTAAA	-22	NA	79867140	79863317	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_79863780_79864424_79865963_79866915
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027082	chr11	-	2870	2	Intergenic	novelGene_867	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	104	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTATTTATTTATTTTAT	NA	False	NA	-1	True	ATTAAA	-22	NA	79867140	79863317	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_79865963_79866915
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027085	chr11	-	3327	2	Intergenic	novelGene_868	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTATTTATTTATTTTAT	NA	False	NA	-1	True	ATTAAA	-22	NA	79867140	79863317	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_79866420_79866915
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027092	chr11	+	1046	2	Intergenic	novelGene_869	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	74	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGGTTGATCACCTC	NA	False	NA	25	True	NA	NA	NA	79864504	79866015	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_79864672_79865136
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027099	chr11	+	4430	16	FSM	ENSMUSG00000017548.16	ENSMUST00000017692.15	4373	16	-55	-2	-55	2	multi-exon	FALSE	canonical	3	1594	junction_3	192.466747488726	535	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTCTGCATTGTTATTA	NA	False	NA	39	True	TATAAA	-24	NA	79883876	79924951	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027134	chr11	-	2406	8	FSM	ENSMUSG00000017561.17	ENSMUST00000061283.15	2396	8	-10	0	-10	0	multi-exon	FALSE	canonical	0	0	junction_2	192.168081190846	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTTGTGGTTTTTTGT	4478	False	NA	-3	True	AATAAA	-20	NA	79971827	79937318	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_79938564_79939417_79939531_79947277_79947411_79948617_79948841_79950025_79950204_79950923_79951012_79955017_79955226_79971609
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027158	chr11	+	7268	23	FSM	ENSMUSG00000017550.15	ENSMUST00000017694.7	7272	23	10	-6	10	3	multi-exon	FALSE	canonical	3	77	junction_5	19.8640524191917	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGGTTTTTTTGTTTTT	6009	False	NA	31	True	ATTAAA	-26	NA	79980235	80026623	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003664_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027161	chr11	+	7240	23	FSM	ENSMUSG00000017550.15	ENSMUST00000108239.7	7266	23	10	16	10	-13	multi-exon	FALSE	canonical	3	47	junction_12	23.2130360212169	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGTGTGTTAAATTAT	6009	False	NA	12	True	ATTAAA	-7	NA	79980235	80026604	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003655_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027177	chr11	-	1311	4	FSM	ENSMUSG00000046909.10	ENSMUST00000050207.10	1309	4	0	-2	0	2	multi-exon	FALSE	canonical	3	265	junction_2	2.16024689946929	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTTCTTTGCTTAAGT	NA	False	NA	-2	True	AATAAA	-16	NA	80033001	80027501	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_80028106_80028743_80028894_80030691_80031150_80032902
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027189	chr11	+	216	1	Intergenic	novelGene_870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCATGCTCTGTTCCCTGG	NA	False	NA	NA	False	NA	NA	NA	80038985	80039201	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_80039000_80039200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027194	chr11	+	1995	5	FSM	ENSMUSG00000020707.7	ENSMUST00000017839.3	1984	5	-11	0	-11	0	multi-exon	FALSE	canonical	3	52	junction_2	3.96074487943871	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGAGTTCATTGGGT	NA	False	NA	34	True	NA	NA	NA	80074665	80090583	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_80075082_80080049_80080194_80084711_80084875_80087698_80087774_80089386
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027195	chr11	+	1848	4	NIC	ENSMUSG00000020707.7	novel	1984	5	NA	NA	-11	-3	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	17.6131264181639	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTGTTGAGTTCATTG	NA	False	NA	31	True	NA	NA	NA	80074665	80090580	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_80075082_80084711_80084875_80087698_80087774_80089386
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027209	chr11	+	165	1	Intergenic	novelGene_871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTTTTAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	80080206	80080371	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_80080200_80080400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027236	chr11	+	3232	21	FSM	ENSMUSG00000017686.18	ENSMUST00000077451.14	3297	21	65	0	0	0	multi-exon	FALSE	canonical	3	23	junction_19	176.261425161605	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGAGGTTTTTTGTCTTC	NA	False	NA	9	True	AATAAA	-20	NA	80099909	80157638	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80148339_80148463_80156567
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027237	chr11	+	3109	20	FSM	ENSMUSG00000017686.18	ENSMUST00000017831.16	3029	20	-35	-45	0	0	multi-exon	FALSE	canonical	3	150	junction_18	134.011803341732	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGAGGTTTTTTGTCTTC	NA	False	NA	9	True	AATAAA	-20	NA	80099909	80157638	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80156567
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027244	chr11	+	3126	20	FSM	ENSMUSG00000017686.18	ENSMUST00000055056.16	4260	20	39	1095	10	0	multi-exon	FALSE	canonical	3	75	junction_18	152.933077899418	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGAGGTTTTTTGTCTTC	NA	False	NA	9	True	AATAAA	-20	NA	80099919	80157638	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80148339_80148463_80156567
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027251	chr11	+	207	1	Intergenic	novelGene_872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTACAGCTATTGGGGC	3012	False	NA	NA	False	NA	NA	NA	80144845	80145052	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_80144800_80145100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027254	chr11	-	375	2	Antisense	novelGene_ENSMUSG00000017686.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGCTGTAATTTCTAACA	NA	False	NA	NA	False	NA	NA	NA	80149986	80144845	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr11_-_80145063_80149828
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027263	chr11	+	185	1	Intergenic	novelGene_873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATAGAGAGTTGAGGTT	25	False	NA	NA	False	NA	NA	NA	80171510	80171695	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_80171500_80171700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027275	chr11	+	2266	11	FSM	ENSMUSG00000017421.19	ENSMUST00000017567.14	2245	11	-21	0	3	0	multi-exon	FALSE	canonical	3	695	junction_8	108.208317610062	245	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGATACATGATTGAAT	NA	False	NA	130	True	AATAAA	-18	NA	80274107	80287074	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027306	chr11	-	183	1	Intergenic	novelGene_874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCCTCGAGACAGGG	NA	False	NA	-1	True	NA	NA	NA	80317447	80317264	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_80317300_80317400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027320	chr11	+	1683	13	FSM	ENSMUSG00000017428.17	ENSMUST00000173938.8	1626	13	0	-57	0	57	multi-exon	FALSE	canonical	3	918	junction_5	64.9491253897148	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAAGCTGTGCTCTCTGC	NA	False	NA	13	True	NA	NA	NA	80319448	80362792	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027332	chr11	-	185	1	Intergenic	novelGene_875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAGAAGGAAAACACAA	NA	False	NA	NA	False	NA	NA	NA	80331779	80331594	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_80331600_80331800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027336	chr11	-	211	1	Intergenic	novelGene_876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAAAGAGGGTCCTTT	NA	False	NA	NA	False	AATGAA	-6	NA	80362126	80361915	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_80361900_80362100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027350	chr11	+	178	1	Intergenic	novelGene_877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTCAAGCAAAGAGAAGG	NA	False	NA	NA	False	NA	NA	NA	82614806	82614984	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_82614800_82615000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027354	chr11	+	190	1	Intergenic	novelGene_878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGTTCATTGAGCTGG	NA	False	NA	NA	False	NA	NA	NA	82631082	82631272	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_82631100_82631300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027363	chr11	+	2474	1	FSM	ENSMUSG00000046010.8	ENSMUST00000056677.8	1591	1	0	-883	0	883	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAAAGAACTGTTTTTAC	NA	False	NA	10	True	NA	NA	NA	82655170	82657644	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_82655200_82657600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027372	chr11	+	5917	20	FSM	ENSMUSG00000020697.17	ENSMUST00000173722.8	5797	20	-44	-76	17	0	multi-exon	FALSE	canonical	0	0	junction_1	44.7105805272123	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTTTCCCCCCCAA	NA	False	NA	11	True	AATAAA	-16	NA	82671984	82695100	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_82672099_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027378	chr11	+	5923	20	FSM	ENSMUSG00000020697.17	ENSMUST00000092849.12	4560	20	51	-1414	17	2	multi-exon	FALSE	canonical	3	118	junction_3	18.4785568622637	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTTTTCCCCCCCAAAT	NA	False	NA	13	True	AATAAA	-18	NA	82671984	82695102	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_82672103_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027391	chr11	-	202	1	Intergenic	novelGene_879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGAGGGAAGCCGTTAG	NA	False	NA	NA	False	NA	NA	NA	82687657	82687455	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_82687500_82687700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027401	chr11	-	3377	6	NIC	ENSMUSG00000020696.19	novel	3489	7	NA	NA	32	4	combination_of_known_junctions	FALSE	canonical	3	66	junction_3	39.9769933836951	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCCCATCTGGTGTGT	2775	False	NA	NA	False	AATAAA	-15	NA	82762004	82694643	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_82697016_82699338_82699363_82700833_82701045_82703225_82703637_82709241_82709430_82761833
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027406	chr11	-	3451	7	FSM	ENSMUSG00000020696.19	ENSMUST00000108173.10	3489	7	41	-3	41	3	multi-exon	FALSE	canonical	3	78	junction_4	36.5942466637706	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCCCATCTGGTGTG	2784	False	NA	NA	False	AATAAA	-14	NA	82761995	82694644	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82761833
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027424	chr11	+	192	1	Intergenic	novelGene_880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGTGGAGCAGAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	82707791	82707983	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_82707800_82708000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027429	chr11	-	179	1	Intergenic	novelGene_881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAAAAAAAAGATC	9251	False	NA	NA	False	NA	NA	NA	82755528	82755349	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_82755300_82755500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027448	chr11	-	1754	13	FSM	ENSMUSG00000020692.15	ENSMUST00000103213.10	1783	13	29	0	29	0	multi-exon	TRUE	canonical	3	193	junction_4	34.6180548590215	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCAGCTTCTTGTTCTA	8332	False	NA	-6	True	AATAAA	-22	NA	82799208	82791593	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_82791877_82792382_82792454_82792534_82792695_82793820_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027482	chr11	+	5411	22	FSM	ENSMUSG00000035152.15	ENSMUST00000018875.13	5625	22	214	0	-6	0	multi-exon	FALSE	canonical	3	76	junction_14	47.3312733095844	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTTTGTGGTATGGACT	2173	False	NA	NA	False	AATAAA	-16	NA	83193522	83295861	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83255620_83255663_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027497	chr11	+	191	1	Intergenic	novelGene_882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTACCAAAAAAAATTACAGA	4881	False	NA	NA	False	NA	NA	NA	83200417	83200608	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_83200400_83200600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027506	chr11	+	189	1	Intergenic	novelGene_883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAACTTTTAAAAAGTCC	NA	False	NA	NA	False	NA	NA	NA	83369144	83369333	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_83369100_83369300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027527	chr11	-	883	3	Intergenic	novelGene_884	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	50	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGCCATGGTGGCATT	4759	False	NA	-25	True	AATAAA	-17	NA	83458250	83454495	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_83455094_83457579_83457647_83458032
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027531	chr11	-	1218	5	NNC	ENSMUSG00000019122.9	novel	3006	4	NA	NA	-3699	660	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_4	25.1445819213603	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGTCTGCCTCTTTTGC	NA	False	NA	1	True	AATAAA	-20	NA	83473161	83465483	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_83466322_83466668_83466778_83467200_83467273_83469214_83469351_83473098
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027532	chr11	-	1082	4	NNC	ENSMUSG00000019122.9	novel	3006	4	NA	NA	-3699	660	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_3	12.9614813968157	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGTCTGCCTCTTTTGC	NA	False	NA	1	True	AATAAA	-20	NA	83473161	83465483	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_83466322_83466668_83466778_83467200_83467273_83473098
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027543	chr11	+	4472	20	FSM	ENSMUSG00000000976.14	ENSMUST00000001002.8	5614	20	7	1135	7	598	multi-exon	TRUE	canonical	3	50	junction_5	6.60059596066985	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTAGGGTTATATAAGAAA	4024	False	NA	NA	False	AATAAA	-17	NA	83644528	83673445	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027547	chr11	+	3154	15	FSM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	40	0	40	0	multi-exon	FALSE	canonical	3	267	junction_7	30.0713437392763	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTAATTGTTTTGTTCT	NA	False	NA	NA	False	AATAAA	-26	NA	83832927	83853914	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_83833091_83834068_83834268_83835361_83835496_83836930_83837117_83839270_83839415_83840408_83840521_83842115_83842189_83842937_83843142_83844052_83844144_83845906_83846030_83846114_83846266_83846797_83846874_83848291_83848364_83850272_83850360_83852575
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027559	chr11	+	194	1	Intergenic	novelGene_885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTGAAATGGCTGCAAG	NA	False	NA	NA	False	NA	NA	NA	83841534	83841728	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_83841500_83841700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027574	chr11	-	2440	16	FSM	ENSMUSG00000018651.15	ENSMUST00000018795.13	2151	16	-34	-255	-34	255	multi-exon	FALSE	canonical	3	409	junction_10	48.5691259958423	249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGCCGCTTTCTGTGAG	NA	False	NA	-20	True	AATAAA	-19	NA	84020460	83969490	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84011907_84012015_84017813_84017922_84020362
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027609	chr11	+	194	1	Intergenic	novelGene_886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAAAGGCATGGACTGTC	1143	False	NA	NA	False	NA	NA	NA	84196746	84196940	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_84196700_84196900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027614	chr11	+	205	1	Intergenic	novelGene_887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTTGTCTGAATGCATG	6997	False	NA	NA	False	NA	NA	NA	84202600	84202805	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_84202600_84202800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027623	chr11	-	1836	13	FSM	ENSMUSG00000018697.15	ENSMUST00000018841.3	1822	13	-14	0	-14	0	multi-exon	TRUE	canonical	3	481	junction_8	26.3136793744665	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTCTTCACTGTGAGT	NA	False	NA	0	True	AATAAA	-44	NA	84404362	84313680	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_84313846_84333391_84333464_84336452_84336534_84339945_84340014_84358286_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84400484_84400623_84401024_84401244_84402308_84402405_84402966_84403156_84404117
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027636	chr11	+	192	1	Intergenic	novelGene_888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAACTTGAAGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	84606018	84606210	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_84606000_84606200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027701	chr11	+	3819	25	FSM	ENSMUSG00000020527.15	ENSMUST00000093969.11	4091	25	168	104	6	0	multi-exon	FALSE	canonical	3	91	junction_6	19.4264996561112	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAACCTTTTGTTTTTG	NA	False	NA	16	True	AATAAA	-24	NA	84771141	84801948	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027720	chr11	-	997	5	FSM	ENSMUSG00000020526.13	ENSMUST00000103195.5	998	5	1	0	1	0	multi-exon	FALSE	canonical	3	360	junction_2	22.0609949911603	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGTTCCCTTAGTAAAC	NA	False	NA	69	True	AATAAA	-16	NA	84807191	84801775	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_84802475_84804047_84804129_84805036_84805112_84806924_84806957_84807081
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027728	chr11	+	187	1	Intergenic	novelGene_889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCATTCGCTGCTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	84866539	84866726	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_84866500_84866700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027735	chr11	-	6973	34	FSM	ENSMUSG00000000804.15	ENSMUST00000108075.9	7053	34	83	-3	13	3	multi-exon	FALSE	canonical	3	28	junction_26	11.8228429036788	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTTTGTGATCCTGTT	7568	False	NA	-11	True	AGTAAA	-25	NA	85030781	84875264	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_84877410_84878094_84878188_84879159_84879585_84883278_84883568_84885211_84885404_84896633_84896755_84897818_84897906_84900784_84900970_84908455_84908668_84910590_84910703_84912981_84913134_84913556_84913732_84916344_84916519_84917601_84917708_84917926_84918066_84919886_84919962_84921308_84921391_84922894_84923050_84927347_84927466_84930026_84930168_84930820_84930997_84933313_84933507_84935535_84935639_84941212_84941275_84942016_84942101_84944473_84944537_84944759_84944876_84946591_84946700_84949953_84950086_84968090_84968251_84971956_84972076_84974614_84974721_84994724_84994853_85030536
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027743	chr11	-	182	1	Intergenic	novelGene_890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATAAAGGTGAAGCTTA	1218	False	NA	NA	False	NA	NA	NA	84915136	84914954	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_84915000_84915100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027748	chr11	+	197	1	Intergenic	novelGene_891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTCACATAGAATAAGAAG	NA	False	NA	NA	False	NA	NA	NA	84988780	84988977	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_84988800_84989000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027758	chr11	-	185	1	Intergenic	novelGene_892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTGAGTTTTTATCTA	NA	False	NA	NA	False	NA	NA	NA	84999888	84999703	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_84999700_84999900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027764	chr11	+	192	1	Intergenic	novelGene_893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAATCAGAGCTTGCTAAC	NA	False	NA	NA	False	NA	NA	NA	85015312	85015504	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_85015300_85015500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027771	chr11	-	6456	13	FSM	ENSMUSG00000018481.10	ENSMUST00000018625.10	6463	13	2	5	2	-5	multi-exon	TRUE	canonical	3	360	junction_12	22.6180544894756	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATGCTTCCGATTGAAT	NA	False	NA	-5	True	AATAAA	-20	NA	85125954	85078092	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_85082726_85085400_85085567_85086891_85087083_85088891_85088978_85091119_85091245_85092241_85092348_85092428_85092497_85095059_85095150_85100765_85100935_85105061_85105186_85105935_85106088_85107261_85107351_85125497
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027782	chr11	+	191	1	Intergenic	novelGene_894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATTAGTATTTCCAACA	NA	False	NA	NA	False	NA	NA	NA	85084207	85084398	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_85084200_85084400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027793	chr11	+	2903	6	FSM	ENSMUSG00000020525.18	ENSMUST00000020835.16	2899	6	0	-4	0	4	multi-exon	FALSE	canonical	3	65	junction_1	8.90842298052804	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCGTTTTGTTGGTGAC	7706	False	NA	7	True	AATAAA	-17	NA	85202069	85237896	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_85202750_85217689_85217919_85223076_85223202_85227890_85228082_85230379_85230623_85236461
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027805	chr11	+	2503	22	ISM	ENSMUSG00000059439.16	ENSMUST00000092821.10	2769	24	-48	241353	-3	-19047	5prime_fragment	FALSE	canonical	3	82	junction_16	16.0315731563836	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGCTTACACAGCATTTC	3475	False	NA	NA	False	NA	NA	NA	85243989	85474823	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_+_85244060_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027816	chr11	-	195	1	Intergenic	novelGene_895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTAATTTTTTAAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	85261620	85261425	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_85261400_85261600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027822	chr11	+	237	1	Intergenic	novelGene_896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGAATTTGTTGATGTGT	NA	False	NA	NA	False	NA	NA	NA	85393981	85394218	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_85394000_85394200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027829	chr11	-	187	1	Intergenic	novelGene_897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTAAAAAAGACCTCCTC	NA	False	NA	NA	False	NA	NA	NA	85744034	85743847	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_85743800_85744000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027834	chr11	+	167	1	Intergenic	novelGene_898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAGTAGTGATCAA	9870	False	NA	NA	False	NA	NA	NA	85749826	85749993	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_85749800_85750000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027843	chr11	-	6938	20	FSM	ENSMUSG00000034329.17	ENSMUST00000044423.4	6931	20	0	-7	0	7	multi-exon	FALSE	canonical	3	63	junction_1	12.1006856333757	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCCGATGACTTATCTACA	NA	False	NA	NA	False	AATAAA	-21	NA	86092019	85948956	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091934
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027852	chr11	+	1640	1	Intergenic	novelGene_899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAAAGAACTTAATTGAAA	NA	False	NA	NA	False	NA	NA	NA	85976208	85977848	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_85976200_85977800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027854	chr11	+	190	1	Intergenic	novelGene_900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAAACCATCTTTCTATA	NA	False	NA	NA	False	NA	NA	NA	86007342	86007532	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_86007300_86007500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027861	chr11	+	2761	2	FSM	ENSMUSG00000085208.4	ENSMUST00000128960.2	4423	2	17	1645	4	-1645	multi-exon	FALSE	canonical	3	24	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCGTCTCTGTTTCTGTG	NA	False	NA	9	True	NA	NA	NA	86092212	86100373	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_86092379_86097778
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027866	chr11	-	5994	26	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	3	0	intron_retention	FALSE	canonical	3	33	junction_24	49.1211726244397	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAGCTTTTATGTTTTAT	NA	False	NA	NA	False	TATAAA	-22	NA	86148388	86101506	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86147247_86147324_86148029
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027867	chr11	-	5832	26	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_25	39.3049615188719	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAGCTTTTATGTTTTAT	NA	False	NA	NA	False	TATAAA	-22	NA	86148391	86101506	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148029_86148242_86148330
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027868	chr11	-	5919	25	FSM	ENSMUSG00000018068.14	ENSMUST00000018212.13	5906	25	-13	0	2	0	multi-exon	FALSE	canonical	3	118	junction_24	28.5226213829577	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAGCTTTTATGTTTTAT	NA	False	NA	NA	False	TATAAA	-22	NA	86148389	86101506	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148029
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027894	chr11	+	196	1	Intergenic	novelGene_901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTAAAATGATTTTCTT	NA	False	NA	NA	False	NA	NA	NA	86112654	86112850	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_86112700_86112800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027897	chr11	+	186	1	Intergenic	novelGene_902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTCTTCAGAGGACCT	NA	False	NA	NA	False	NA	NA	NA	86149732	86149918	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_86149700_86149900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027925	chr11	-	2393	17	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_9	95.2312973764403	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACAGCTGTGGCTTGTCTG	NA	False	NA	-4	True	AATAAA	-21	NA	86435595	86392858	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408058_86408076_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027941	chr11	+	184	1	Intergenic	novelGene_903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATCATACTCTGCTAG	NA	False	NA	NA	False	NA	NA	NA	86428128	86428312	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_86428100_86428300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027944	chr11	+	204	1	Intergenic	novelGene_904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTAATGAACCAGTATCT	NA	False	NA	NA	False	AAAACA	-10	NA	86429289	86429493	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_86429300_86429500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027958	chr11	-	1979	12	FSM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	-20	828	-20	237	multi-exon	FALSE	canonical	3	615	junction_5	55.9317766244166	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCCGTTTTCTTTAGT	9852	False	NA	0	True	TATAAA	-23	NA	86574682	86475518	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_86476278_86477321_86477425_86492833_86492896_86498001_86498119_86502167_86502249_86526000_86526133_86534323_86534492_86551948_86552060_86554308_86554400_86555479_86555616_86556602_86556705_86574565
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000027959	chr11	-	1182	6	NNC	ENSMUSG00000018171.10	novel	2787	12	NA	NA	-19012	237	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_5	277.055517902098	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCCGTTTTCTTTAGT	NA	False	NA	0	True	TATAAA	-23	NA	86512133	86475518	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_86476278_86477321_86477425_86492833_86492896_86498001_86498119_86502167_86502249_86512073
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028010	chr11	-	2800	18	FSM	ENSMUSG00000018425.19	ENSMUST00000018569.14	3813	18	114	899	114	-899	multi-exon	FALSE	canonical	3	128	junction_4	18.4312056730034	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGGCCTTCTTATTGCT	8641	False	NA	-1	True	ATTAAA	-21	NA	86698458	86660570	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86666485_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86695082_86695229_86697285_86697454_86698263
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028014	chr11	-	184	1	Intergenic	novelGene_905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGAGTGAATATTCTTAT	5391	False	NA	NA	False	NA	NA	NA	86678589	86678405	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_86678400_86678600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028019	chr11	+	180	1	Intergenic	novelGene_906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	86712665	86712845	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_86712700_86712800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028028	chr11	-	4889	5	FSM	ENSMUSG00000018427.9	ENSMUST00000018571.5	4847	5	-42	0	-42	0	multi-exon	FALSE	canonical	3	55	junction_1	6.94172168845741	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGGGAGAATGTCTGTT	NA	False	NA	-8	True	AATAAA	-16	NA	86884575	86827250	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_86831515_86835398_86835508_86836758_86836803_86862634_86862949_86884417
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028041	chr11	-	241	1	Intergenic	novelGene_907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTCCCCTCTCTGC	NA	False	NA	NA	False	NA	NA	NA	86914203	86913962	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_86914000_86914200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028065	chr11	-	3894	10	FSM	ENSMUSG00000020493.9	ENSMUST00000051395.9	3824	10	-70	0	-70	0	multi-exon	FALSE	canonical	3	68	junction_6	5.79484658240235	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCCAGAGTTCATGTTG	NA	False	NA	-13	True	ATTAAA	-16	NA	86999604	86979978	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_86982692_86987788_86987886_86987960_86988021_86989488_86989605_86990200_86990300_86992207_86992472_86994012_86994136_86994365_86994517_86996834_86996968_86999466
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028075	chr11	+	3040	4	FSM	ENSMUSG00000020492.12	ENSMUST00000020794.6	3037	4	-3	0	-3	0	multi-exon	FALSE	canonical	3	189	junction_1	6.12825877028341	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCCTCCATGTTATATT	NA	False	NA	13	True	AATAAA	-21	NA	87000056	87015461	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_87000131_87006929_87007017_87008493_87008671_87012759
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028086	chr11	+	3599	25	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-36	30191	at_least_one_novel_splicesite	TRUE	canonical	3	225	junction_24	67.5794671109502	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTCATAATTTGTTC	1880	False	NA	8	True	NA	NA	NA	87017866	87141700	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028107	chr11	+	192	1	Intergenic	novelGene_908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAGGTCTAGGGACTGGT	9559	False	NA	NA	False	NA	NA	NA	87025545	87025737	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_87025500_87025700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028116	chr11	+	210	1	Intergenic	novelGene_909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATTTTTGTTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	87085465	87085675	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_87085500_87085700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028122	chr11	-	188	1	Intergenic	novelGene_910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATGTGGGAGGGGCCT	NA	False	NA	-9	True	NA	NA	NA	87226233	87226045	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_87226000_87226200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028130	chr11	+	132	1	Intergenic	novelGene_911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGTAACTGACAACCAAG	NA	False	NA	NA	False	NA	NA	NA	87233551	87233683	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_87233600_87233700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028140	chr11	-	2089	10	FSM	ENSMUSG00000007646.14	ENSMUST00000153073.8	2061	10	10	-38	10	38	multi-exon	FALSE	canonical	3	11	junction_2	58.9867112048589	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGTATATGTATCTGT	NA	False	NA	0	True	AATAAA	-20	NA	87295322	87269378	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_87270314_87271657_87271719_87279073_87279154_87279444_87279506_87280659_87280727_87286091_87286224_87288449_87288584_87292215_87292383_87293423_87293683_87295129
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028143	chr11	-	2028	9	FSM	ENSMUSG00000007646.14	ENSMUST00000067692.13	3944	9	8	1908	8	38	multi-exon	FALSE	canonical	3	130	junction_1	12.5940213990607	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGTATATGTATCTGT	NA	False	NA	0	True	AATAAA	-20	NA	87295341	87269378	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_87270314_87271657_87271719_87279444_87279506_87280659_87280727_87286091_87286224_87288449_87288584_87292215_87292383_87293423_87293683_87295129
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028149	chr11	-	185	1	Intergenic	novelGene_912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAGAGAGAAAAGGAAA	-4	True	NA	NA	False	NA	NA	NA	87294058	87293873	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_87293900_87294100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028157	chr11	+	4769	31	FSM	ENSMUSG00000010342.17	ENSMUST00000060835.12	4763	31	-6	0	-6	0	multi-exon	FALSE	canonical	1	19	junction_12	24.6584671056414	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGTGCCAGTTGTGATT	NA	False	NA	14	True	AATAAA	-20	NA	87295884	87446649	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028170	chr11	+	176	1	Intergenic	novelGene_913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTTTTTAAATTAGGTA	NA	False	NA	NA	False	NA	NA	NA	87323494	87323670	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_87323500_87323700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028182	chr11	+	219	1	Intergenic	novelGene_914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTATATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	87326156	87326375	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_87326200_87326400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028191	chr11	+	189	1	Intergenic	novelGene_915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAGTGGGGCCTGGAGA	NA	False	NA	NA	False	NA	NA	NA	87355113	87355302	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_87355100_87355300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028197	chr11	+	175	1	Genic_Genomic	ENSMUSG00000083894.2	novel	NA	NA	NA	NA	1377	172	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGAATGCAGGGC	NA	False	NA	NA	False	NA	NA	NA	87359881	87360056	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr11_+_87359900_87360100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028198	chr11	+	206	1	Intergenic	novelGene_916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGCATAGTACAGCCCAG	NA	False	NA	NA	False	NA	NA	NA	87360072	87360278	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_87360100_87360300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028206	chr11	-	184	1	Intergenic	novelGene_917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGCAAGAGAAAGTGCTG	NA	False	NA	7	True	NA	NA	NA	87374931	87374747	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_87374700_87374900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028215	chr11	-	180	1	Intergenic	novelGene_918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTGGGTTTTTT	7442	False	NA	-3	True	NA	NA	NA	87397045	87396865	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_87396900_87397000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028243	chr11	+	731	5	FSM	ENSMUSG00000020485.15	ENSMUST00000093955.12	706	5	-19	-6	-19	0	multi-exon	FALSE	canonical	3	512	junction_3	25.7972866790289	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTACTGAGGCCTGTGCCT	NA	False	NA	8	True	AATAAA	-25	NA	87628358	87634449	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_87628495_87628992_87629100_87633621_87633678_87633883_87633938_87634071
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028282	chr11	-	2448	3	FSM	ENSMUSG00000020483.15	ENSMUST00000020775.9	2476	3	28	0	28	0	multi-exon	FALSE	canonical	3	615	junction_2	8	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTTGGGGTTTCTTTGGG	NA	False	NA	0	True	ATTAAA	-22	NA	87878331	87870350	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_87872397_87874697_87874837_87878068
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028294	chr11	-	3940	2	FSM	ENSMUSG00000020483.15	ENSMUST00000178105.3	2187	2	-3491	1738	30	-1108	multi-exon	FALSE	canonical	3	631	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTAGTTGCCTGGG	NA	False	NA	-24	True	AGTAAA	-16	NA	87878329	87872088	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_87872397_87874697
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028300	chr11	+	195	1	Intergenic	novelGene_919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCCTGTTTAAGCAGGG	NA	False	NA	NA	False	NA	NA	NA	87929736	87929931	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_87929700_87929900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028303	chr11	+	195	1	Intergenic	novelGene_920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	308	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTGCTGTGTTTACAAC	79	False	NA	NA	False	AAGAAA	-2	NA	87932027	87932222	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_87932000_87932200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028311	chr11	+	5404	4	FSM	ENSMUSG00000018379.18	ENSMUST00000139129.9	5362	4	-40	-2	-40	2	multi-exon	FALSE	canonical	3	1111	junction_3	192.19839287107	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGATTTAAGTTCTCCAT	6210	False	NA	22	True	AATAAA	-24	NA	87938158	87944583	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028322	chr11	+	2122	4	NIC	ENSMUSG00000018379.18	novel	896	4	NA	NA	-52	3	intron_retention	FALSE	canonical	3	275	junction_3	562.44999777758	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGGTTGTCCTTTTTCC	6543	False	NA	24	True	AATAAA	-18	NA	87938491	87942319	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_87938859_87939315_87939501_87939868_87940922_87941802
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028338	chr11	+	2438	3	NIC	ENSMUSG00000018379.18	novel	2948	3	NA	NA	0	3	intron_retention	FALSE	canonical	3	275	junction_2	517.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGGTTGTCCTTTTTCC	6595	False	NA	24	True	AATAAA	-18	NA	87938543	87942319	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_87938859_87939315_87940922_87941802
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028346	chr11	+	3776	1	NIC	ENSMUSG00000018379.18	novel	5362	4	NA	NA	0	3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGGTTGTCCTTTTTCC	6595	False	NA	24	True	AATAAA	-18	NA	87938543	87942319	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_87938500_87942300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028348	chr11	+	1873	5	NIC	ENSMUSG00000018379.18	novel	1209	5	NA	NA	1	3	intron_retention	FALSE	canonical	3	275	junction_4	487.699190075194	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGGTTGTCCTTTTTCC	6596	False	NA	24	True	AATAAA	-18	NA	87938544	87942319	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237_87940922_87941802
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028377	chr11	+	1312	5	FSM	ENSMUSG00000023723.18	ENSMUST00000024486.14	1332	5	20	0	-3	0	multi-exon	FALSE	canonical	3	245	junction_1	23.6999472573253	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTCTCTATTTGTGGG	NA	False	NA	19	True	AATAAA	-19	NA	88095233	88102333	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_88095312_88096014_88096186_88100678_88100757_88100929_88101057_88101475
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028388	chr11	+	174	1	Intergenic	novelGene_921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAACATATCCCCA	4886	False	NA	NA	False	NA	NA	NA	88104183	88104357	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_88104200_88104400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028395	chr11	-	178	1	Intergenic	novelGene_922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAATGTACATAAAA	NA	False	NA	NA	False	NA	NA	NA	88108608	88108430	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_88108400_88108600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028398	chr11	+	208	1	Intergenic	novelGene_923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGCTGCTCTTGCAGAG	NA	False	NA	NA	False	NA	NA	NA	88136867	88137075	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_88136900_88137100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028406	chr11	+	185	1	Intergenic	novelGene_924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAGAATATGTCTGG	NA	False	NA	NA	False	NA	NA	NA	88492369	88492554	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_88492400_88492600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028413	chr11	+	188	1	Intergenic	novelGene_925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAGTGACACAACTG	NA	False	NA	NA	False	NA	NA	NA	88590561	88590749	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_88590600_88590700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028424	chr11	-	3695	11	NNC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	65	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	274.179886206118	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGAGTCCATTTTTTCTT	NA	False	NA	92	True	TATAAA	-7	NA	88755347	88721617	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_88722656_88723133_88723197_88723965_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88755222
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028433	chr11	-	176	1	Intergenic	novelGene_926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAGTTTTTAAACC	NA	False	NA	NA	False	NA	NA	NA	88765031	88764855	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_88764900_88765000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028437	chr11	+	743	1	Intergenic	novelGene_927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCACTTCTTCTGGATCTA	NA	False	NA	NA	False	NA	NA	NA	88781005	88781748	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_88781000_88781700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028444	chr11	-	2092	13	FSM	ENSMUSG00000000278.11	ENSMUST00000000287.9	2097	13	8	-3	8	3	multi-exon	FALSE	canonical	3	2404	junction_3	148.297748540638	906	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCTGAAAATTCTGTTCTG	5209	False	NA	-6	True	AATAAA	-23	NA	88846283	88814842	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028459	chr11	+	1049	4	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	-2699	-17540	at_least_one_novel_splicesite	FALSE	canonical	3	287	junction_3	341.385738164649	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTATTTATTTAGCTT	6732	False	NA	NA	False	NA	NA	NA	88858378	88864240	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_+_88858476_88861243_88861306_88861723_88861820_88863446
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028482	chr11	+	1021	2	NIC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	1	-17540	intron_retention	FALSE	canonical	3	1774	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTATTTATTTAGCTT	9432	False	NA	NA	False	NA	NA	NA	88861078	88864240	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_88861306_88863446
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028493	chr11	+	199	1	Intergenic	novelGene_928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGCCACGTGAAAGAAAGA	6746	False	NA	NA	False	NA	NA	NA	88871535	88871734	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_88871500_88871700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028505	chr11	+	5563	9	FSM	ENSMUSG00000000275.17	ENSMUST00000107896.10	5590	9	28	-1	28	1	multi-exon	TRUE	canonical	3	172	junction_5	154.213123630902	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATTGTCCTGCCTTTTGC	NA	False	NA	25	True	NA	NA	NA	88890229	88911120	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904365_88905992_88906017_88906358_88906458_88906544_88906644_88907020
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028520	chr11	-	213	1	Intergenic	novelGene_929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGCACCCAGGAGGCAG	NA	False	NA	NA	False	AAAAAG	-17	NA	88936513	88936300	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_88936300_88936500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028527	chr11	-	1934	6	FSM	ENSMUSG00000020553.9	ENSMUST00000020864.9	2723	6	26	763	26	-763	multi-exon	FALSE	canonical	3	31	junction_1	5.78273291792038	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTCTGTGTGCTGTCTC	NA	False	NA	-12	True	AATAAA	-14	NA	89893694	89874253	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_89875583_89876918_89876987_89878021_89878194_89879520_89879601_89881896_89882015_89893527
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028534	chr11	+	2694	7	FSM	ENSMUSG00000003948.18	ENSMUST00000004050.7	2677	7	-33	16	-13	-16	multi-exon	FALSE	canonical	3	72	junction_6	11.2249721603218	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATTGTCTGGAGCATAT	NA	False	NA	13	True	AATAAA	-18	NA	90140268	90169399	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_90140562_90148345_90148428_90150652_90150814_90155328_90155404_90156870_90156973_90158337_90158408_90167488
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028541	chr11	-	171	1	Intergenic	novelGene_930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAGAAGTACTCTA	NA	False	NA	NA	False	NA	NA	NA	90240797	90240626	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_90240600_90240800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028552	chr11	+	1230	4	FSM	ENSMUSG00000020544.15	ENSMUST00000020851.15	1224	4	0	-6	0	6	multi-exon	FALSE	canonical	3	285	junction_3	41.2876091178294	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGACAACTTGATTTCTA	NA	False	NA	16	True	NA	NA	NA	90528998	90535763	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_90529379_90531202_90531359_90534478_90534605_90535195
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028590	chr11	+	5334	17	NIC	ENSMUSG00000059474.14	novel	5232	16	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_2	31.7736132663567	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATCAATTTTTCAACAT	NA	False	NA	19	True	AATAAA	-20	NA	93776994	93837811	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028595	chr11	-	767	5	FSM	ENSMUSG00000020857.12	ENSMUST00000021217.11	1012	5	246	-1	-230	1	multi-exon	FALSE	canonical	3	5665	junction_4	866.911327645452	872	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAGTGTTCAGTACTCAT	NA	False	NA	-27	True	NA	NA	NA	93846839	93840638	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_93840873_93842725_93842839_93843625_93843728_93846320_93846451_93846651
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028616	chr11	-	1046	5	FSM	ENSMUSG00000037601.12	ENSMUST00000135884.8	3181	5	189	1946	-60	547	multi-exon	FALSE	canonical	3	3315	junction_4	669.623401622136	373	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGGCCCAGGCCTGT	574	False	NA	-4	True	AATAAA	-14	NA	93859158	93849750	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_93850340_93851493_93851607_93854052_93854155_93856633_93856764_93859046
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028622	chr11	+	103	1	Intergenic	novelGene_931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAACATATGGTGAGAGCT	NA	False	NA	NA	False	NA	NA	NA	93854175	93854278	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_93854200_93854300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028642	chr11	+	189	1	Intergenic	novelGene_932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGTGAATTTTCTCAAG	NA	False	NA	NA	False	NA	NA	NA	94093681	94093870	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_94093700_94093900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028646	chr11	+	2310	2	FSM	ENSMUSG00000037573.6	ENSMUST00000041589.6	2288	2	-18	-4	-18	4	multi-exon	FALSE	canonical	3	252	junction_1	0	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGTGGTCTTTGTTTT	NA	False	NA	NA	False	ATTAAA	-23	NA	94102261	94106325	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_94102558_94104311
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028655	chr11	+	1702	1	ISM	ENSMUSG00000037573.6	ENSMUST00000041589.6	2288	2	2340	0	2340	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTATCCTGTGGTCTTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	94104619	94106321	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_+_94104600_94106300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028658	chr11	+	209	1	Intergenic	novelGene_933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCACTATAACATATAGTCA	NA	False	NA	NA	False	NA	NA	NA	94108590	94108799	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_94108600_94108800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028692	chr11	+	3496	5	FSM	ENSMUSG00000020864.14	ENSMUST00000107818.9	3487	5	-6	-3	-6	3	multi-exon	FALSE	canonical	3	454	junction_3	18.6061145863396	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCATTCTCTCTCGTTTTG	3988	False	NA	20	True	ATTAAA	-21	NA	94218820	94232670	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_94219214_94224726_94224876_94225253_94225734_94229165_94229348_94230378
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028703	chr11	-	1133	4	ISM	ENSMUSG00000020865.17	ENSMUST00000178136.8	5005	31	40888	0	-902	0	intron_retention	FALSE	canonical	3	69	junction_3	10.6249183003395	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGTCACATGTTACCTT	3	True	NA	-4	True	AATAAA	-17	NA	94242914	94234120	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_-_94234602_94236772_94236968_94241761_94241929_94242624
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028707	chr11	+	196	1	Intergenic	novelGene_934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGAGAAGCCACTTCAAG	NA	False	NA	NA	False	NA	NA	NA	94293080	94293276	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_94293100_94293300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028725	chr11	+	206	1	Intergenic	novelGene_935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAACCAAAACCTCTGTG	NA	False	NA	NA	False	NA	NA	NA	94479869	94480075	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_94479900_94480100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028739	chr11	+	2864	7	FSM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	-20	-7	-20	7	multi-exon	FALSE	canonical	3	2480	junction_6	120.266371026983	592	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTGCTGTGAGGGT	NA	False	NA	34	True	ATTAAA	-25	NA	94520572	94536049	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94529356_94529430_94532045_94532220_94534119
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028759	chr11	-	2441	9	FSM	ENSMUSG00000039055.5	ENSMUST00000039949.5	2444	9	3	0	3	0	multi-exon	TRUE	canonical	3	178	junction_8	32.4422563950167	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAGCTTGGAGGAAGAC	4406	False	NA	-5	True	AATAAA	-18	NA	94544787	94535821	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94539056_94540833_94540965_94541048_94541850_94544521
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028779	chr11	-	3437	11	FSM	ENSMUSG00000020868.16	ENSMUST00000116349.9	3442	11	11	-6	11	6	multi-exon	FALSE	canonical	3	112	junction_7	13.508885964431	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTGTTTGCTTCCTGC	2216	False	NA	0	True	AATATA	-22	NA	94568330	94554670	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_94555736_94557023_94557358_94557924_94558121_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561627_94568098
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028789	chr11	-	3960	10	NIC	ENSMUSG00000020868.16	novel	3442	11	NA	NA	49	0	intron_retention	FALSE	canonical	3	112	junction_6	13.3499895963339	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAATGTCCTTGTTTGCT	2254	False	NA	-6	True	AATATA	-16	NA	94568292	94554676	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_94555736_94557023_94558121_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561627_94568098
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028799	chr11	+	185	1	Intergenic	novelGene_936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCGGACTTCAAAACTTC	NA	False	NA	NA	False	NA	NA	NA	94799484	94799669	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_94799500_94799700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028811	chr11	+	193	1	Intergenic	novelGene_937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTCTAGAAGGTTGTC	NA	False	NA	NA	False	NA	NA	NA	94860782	94860975	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_94860800_94861000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028816	chr11	-	2287	11	FSM	ENSMUSG00000038967.14	ENSMUST00000038431.8	2246	11	-41	0	-41	0	multi-exon	FALSE	canonical	3	33	junction_1	6.12290780593665	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGCCTGGCTTCCTTGC	6033	False	NA	-1	True	NA	NA	NA	94932221	94917083	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_94918149_94918690_94918805_94919304_94919413_94919523_94919623_94919747_94919825_94920479_94920558_94920742_94920833_94922661_94922847_94923290_94923363_94930174_94930317_94931964
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028829	chr11	-	4958	26	FSM	ENSMUSG00000001507.17	ENSMUST00000001548.14	4861	26	-98	1	-11	-1	multi-exon	FALSE	canonical	3	46	junction_7	7.12179752590594	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGTCTGCTCCTACC	8774	False	NA	-1	True	AATAAA	-21	NA	94967638	94935300	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_94936590_94937274_94937417_94937746_94937873_94942277_94942377_94943269_94943384_94944050_94944174_94944557_94944741_94944900_94945004_94946521_94946600_94946682_94946763_94947266_94947339_94947529_94947678_94947909_94948008_94948096_94948247_94948792_94948930_94949037_94949106_94950149_94950237_94950381_94950519_94950604_94950694_94952703_94952901_94953378_94953590_94953960_94954048_94956588_94956839_94959050_94959131_94959537_94959666_94966956
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028837	chr11	+	200	1	Intergenic	novelGene_938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	517	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGGAAAATTTAAAGAAAAG	262	False	NA	NA	False	NA	NA	NA	94946079	94946279	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_94946100_94946300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028844	chr11	+	177	1	Intergenic	novelGene_939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTAAGTTAACAATA	3591	False	NA	NA	False	NA	NA	NA	95001502	95001679	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_95001500_95001700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028846	chr11	-	203	1	Intergenic	novelGene_940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTCTGGCTTTGCTTA	8333	False	NA	NA	False	NA	NA	NA	95001976	95001773	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_95001800_95002000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028852	chr11	-	3561	15	FSM	ENSMUSG00000038909.17	ENSMUST00000107734.10	3560	15	3	-4	3	4	multi-exon	FALSE	canonical	3	566	junction_10	130.748239149965	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGCTCTGAAGCTTGTT	NA	False	NA	-1	True	AATAAA	-21	NA	95201069	95165080	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028873	chr11	-	3372	14	NIC	ENSMUSG00000038909.17	novel	3560	15	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_13	247.717939428683	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	-5	True	AATAAA	-17	NA	95201032	95165084	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95200860
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028875	chr11	-	3389	15	FSM	ENSMUSG00000038909.17	ENSMUST00000092766.12	3414	15	25	0	-8	0	multi-exon	FALSE	canonical	0	0	junction_14	245.342544793426	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	-5	True	AATAAA	-17	NA	95200403	95165084	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200362
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028876	chr11	-	3413	14	NIC	ENSMUSG00000038909.17	novel	3560	15	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	152	junction_1	222.401444165419	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	-5	True	AATAAA	-17	NA	95201032	95165084	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_95166714_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028878	chr11	-	3323	13	NIC	ENSMUSG00000038909.17	novel	3470	14	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	152	junction_1	258.98824244012	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	-5	True	AATAAA	-17	NA	95201032	95165084	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_95166714_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028899	chr11	+	2317	8	FSM	ENSMUSG00000038893.13	ENSMUST00000037502.7	2317	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	7.85324578679129	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGGTTTTCTGAATACC	NA	False	NA	13	True	AATAAA	-15	NA	95227843	95272698	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_95228088_95254824_95254995_95262263_95262360_95265807_95265919_95266454_95266590_95268308_95268508_95269644_95269796_95271487
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028909	chr11	+	196	1	Intergenic	novelGene_941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATATGACAACCGTTGG	NA	False	NA	NA	False	NA	NA	NA	95273454	95273650	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_95273500_95273600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028919	chr11	+	1313	9	FSM	ENSMUSG00000020873.16	ENSMUST00000021243.16	1523	9	210	0	-4	0	multi-exon	FALSE	canonical	3	233	junction_2	19.5923294939627	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGAGACCCTGCTGCTGC	NA	False	NA	21	True	AATAAA	-22	NA	95275727	95282602	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_95275940_95276626_95276731_95277311_95277443_95278036_95278068_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028952	chr11	+	3040	10	FSM	ENSMUSG00000057522.16	ENSMUST00000107722.8	3063	10	19	4	19	-4	multi-exon	FALSE	canonical	3	227	junction_3	21.694853460364	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGGTCCTGTCATTGA	NA	False	NA	NA	False	AATAAA	-16	NA	95304942	95384228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028955	chr11	+	246	1	Intergenic	novelGene_942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTACTCAGAGCCAGAC	1324	False	NA	NA	False	NA	NA	NA	95311645	95311891	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_95311600_95311900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028962	chr11	+	206	1	Intergenic	novelGene_943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTTTGTCTAGAATTTG	NA	False	NA	NA	False	AAGAAA	-8	NA	95330719	95330925	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_95330700_95330900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028969	chr11	-	3422	6	FSM	ENSMUSG00000000120.7	ENSMUST00000000122.7	3446	6	32	-8	32	8	multi-exon	FALSE	canonical	3	62	junction_2	5.88557558782486	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAAGAGAATTTTTTTTC	NA	False	NA	NA	False	ATTAAA	-23	NA	95478529	95459635	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_95461922_95462645_95462807_95465016_95465270_95468799_95469160_95471778_95471921_95478309
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028977	chr11	+	179	1	Intergenic	novelGene_944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAGAGCGAGCAGGGCTG	NA	False	NA	NA	False	NA	NA	NA	95500469	95500648	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_95500500_95500600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028985	chr11	+	184	1	Intergenic	novelGene_945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAATAATTCTCTATCTA	NA	False	NA	NA	False	NA	NA	NA	95546496	95546680	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_95546500_95546700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000028990	chr11	+	1792	7	FSM	ENSMUSG00000038845.12	ENSMUST00000125172.8	1799	7	7	0	7	0	multi-exon	FALSE	canonical	3	4384	junction_3	774.980806213935	518	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGGGTGTGTTTTCAATT	NA	False	NA	11	True	AATAAA	-25	NA	95557789	95571599	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_95557869_95558862_95558978_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570519
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029003	chr11	+	194	1	Intergenic	novelGene_946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTTGTGCTTGGCTTCC	NA	False	NA	NA	False	NA	NA	NA	95591980	95592174	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_95592000_95592200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029015	chr11	+	215	1	Intergenic	novelGene_947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAAATTCGTCAGGAA	4681	False	NA	NA	False	NA	NA	NA	95671678	95671893	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_95671700_95671900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029028	chr11	-	4090	11	FSM	ENSMUSG00000013418.9	ENSMUST00000038343.7	1722	11	16	-2384	16	2384	multi-exon	FALSE	canonical	3	16	junction_4	6.67907179179862	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGGTGGTGTGCTTATTT	2906	False	NA	1	True	NA	NA	NA	95805701	95754384	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_95757103_95757575_95757796_95759175_95759317_95760059_95760248_95764687_95764775_95766923_95767105_95774768_95774807_95779632_95779740_95781798_95781937_95782583_95782800_95805645
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029035	chr11	+	2552	1	Intergenic	novelGene_948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGATGGAGTCAT	6424	False	NA	NA	False	NA	NA	NA	95776179	95778731	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_95776200_95778700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029038	chr11	-	236	1	Intergenic	novelGene_949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	504	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGTTTCTCTCTATGGA	8693	False	NA	NA	False	NA	NA	NA	95823119	95822883	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_95822900_95823100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029049	chr11	+	151	1	Intergenic	novelGene_950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	291	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGTGGCCTTGTTGGA	3643	False	NA	NA	False	NA	NA	NA	95835174	95835325	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_95835200_95835300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029072	chr11	-	3966	15	FSM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	-58	4470	-58	1803	multi-exon	FALSE	canonical	3	452	junction_5	71.7782867514933	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTGATAGTCTTGAATA	NA	False	NA	93	True	NA	NA	NA	95896824	95852458	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029084	chr11	-	2413	15	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	-4	307	at_least_one_novel_splicesite	FALSE	canonical	3	191	junction_5	125.171983727207	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGTTTGTTTCTTAACC	NA	False	NA	NA	False	AATAAA	-30	NA	95896770	95853954	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859306_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029085	chr11	-	1977	14	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	-1	307	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	204.16338161025	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGTTTGTTTCTTAACC	NA	False	NA	NA	False	AATAAA	-30	NA	95873438	95853954	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859306_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95873327
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029088	chr11	-	1981	14	NIC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	-2	307	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	177.836138924832	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGTTTGTTTCTTAACC	NA	False	NA	NA	False	AATAAA	-30	NA	95873439	95853954	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95873327
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029096	chr11	-	2055	15	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	-2	302	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	240.619364498015	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGGATGGTTTGTTTCT	NA	False	NA	NA	False	AATAAA	-25	NA	95873439	95853959	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859306_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95871874_95871957_95873327
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029109	chr11	+	208	1	Intergenic	novelGene_951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCTAATAATCATTTCT	NA	False	NA	NA	False	NA	NA	NA	95904299	95904507	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_95904300_95904500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029115	chr11	+	977	8	FSM	ENSMUSG00000006058.11	ENSMUST00000006217.10	1004	8	27	0	27	0	multi-exon	FALSE	canonical	3	665	junction_5	23.859281341282	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTTCCCCCAGTAT	3224	False	NA	21	True	AATAAA	-43	NA	95925737	95938256	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_95925894_95926144_95926196_95930104_95930244_95932450_95932556_95934229_95934303_95935986_95936129_95937105_95937181_95938020
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029129	chr11	-	182	1	Intergenic	novelGene_952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATAGATAGATATCAGCA	NA	False	NA	NA	False	NA	NA	NA	95927061	95926879	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_95926900_95927100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029137	chr11	+	205	1	Genic_Genomic	ENSMUSG00000006058.11	novel	NA	NA	NA	NA	4736	27	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTACTTTTAGGGGGCCG	8013	False	NA	NA	False	NA	NA	NA	95930526	95930731	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr11_+_95930500_95930700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029139	chr11	+	225	1	Intergenic	novelGene_953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTTTTTAGCTGGAAAAG	9701	False	NA	NA	False	AATACA	-12	NA	95932214	95932439	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_95932200_95932400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029159	chr11	+	196	1	Intergenic	novelGene_954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTAGGTCTGGAGCCAG	NA	False	NA	NA	False	NA	NA	NA	95946218	95946414	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_95946200_95946400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029162	chr11	-	183	1	Intergenic	novelGene_955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGGAAAAAATAAGTATTAA	NA	False	NA	NA	False	NA	NA	NA	95947357	95947174	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_95947200_95947400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029167	chr11	-	180	1	ISM	ENSMUSG00000006057.16	ENSMUST00000090541.12	4715	5	6630	9	5997	6	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTAAAATATCTGGTCCA	6588	False	NA	NA	False	NA	NA	NA	95959866	95959686	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_-_95959700_95959900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029173	chr11	-	618	5	FSM	ENSMUSG00000006057.16	ENSMUST00000090541.12	4715	5	-32	4129	-32	6	multi-exon	FALSE	canonical	3	2808	junction_4	3276.79938163751	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGCCTGTCTTTCTA	3447	False	NA	0	True	NA	NA	NA	95966528	95963806	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812_95965860_95966452
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029174	chr11	-	621	5	FSM	ENSMUSG00000006057.16	ENSMUST00000107684.2	596	5	-16	-9	-16	6	multi-exon	FALSE	canonical	3	5157	junction_4	2293.78611688187	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGCCTGTCTTTCTA	3514	False	NA	0	True	NA	NA	NA	95966461	95963806	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812_95965860_95966382
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029205	chr11	-	181	1	Intergenic	novelGene_956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTCAGTAAGAGTAAGTA	659	False	NA	NA	False	NA	NA	NA	95969316	95969135	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_95969100_95969300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029206	chr11	+	179	1	Intergenic	novelGene_957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAATGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	95984633	95984812	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_95984600_95984800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029213	chr11	-	2041	6	FSM	ENSMUSG00000006056.14	ENSMUST00000068686.13	1621	6	-9	-411	-9	411	multi-exon	FALSE	canonical	3	294	junction_5	66.2751838926155	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTCCTAGTGAATCACAG	4202	False	NA	-18	True	AATAAA	-17	NA	96002799	95989740	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_95991229_95993473_95993579_95994042_95994177_95994283_95994387_95998256_95998431_96002762
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029227	chr11	+	191	1	Intergenic	novelGene_958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	271	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGACGGTGGTGATGTTA	5884	False	NA	NA	False	NA	NA	NA	96013216	96013407	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_96013200_96013400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029229	chr11	+	1362	2	FSM	ENSMUSG00000049604.4	ENSMUST00000062709.4	2206	2	-11	855	-11	-855	multi-exon	FALSE	canonical	2	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGACAGTTTCCTCTCAGA	3933	False	NA	NA	False	AATAAA	-18	NA	96085130	96087418	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_96085873_96086798
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029234	chr11	-	185	1	Intergenic	novelGene_959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCCCTGGATTGGAGTTA	8394	False	NA	5	True	NA	NA	NA	96139249	96139064	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_96139100_96139200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029246	chr11	+	189	1	Intergenic	novelGene_960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCGTGGTGGCACACA	9738	False	NA	NA	False	NA	NA	NA	96648922	96649111	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_96648900_96649100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029251	chr11	-	2181	8	FSM	ENSMUSG00000020876.15	ENSMUST00000107661.10	2197	8	18	-2	-10	2	multi-exon	FALSE	canonical	3	35	junction_6	17.839419776416	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTGTTGCAATTTGTG	NA	False	NA	-14	True	AATAAA	-15	NA	96668367	96658700	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96667793_96667888_96668280
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029252	chr11	-	2241	9	FSM	ENSMUSG00000020876.15	ENSMUST00000021246.9	2551	9	-10	320	-10	2	multi-exon	FALSE	canonical	3	53	junction_6	14.0529133990073	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTGTTGCAATTTGTG	NA	False	NA	-14	True	AATAAA	-15	NA	96668367	96658700	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96666199_96666260_96667793_96667888_96668280
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029265	chr11	+	189	1	Intergenic	novelGene_961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATTTTACCTCTGTAAC	NA	False	NA	NA	False	NA	NA	NA	96669309	96669498	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_96669300_96669500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029271	chr11	+	2220	5	ISM	ENSMUSG00000018666.14	ENSMUST00000093943.10	1251	6	-34	484	-2	7	5prime_fragment	FALSE	canonical	3	583	junction_4	77.1508263079534	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTCTTTTTTTTTCCC	NA	False	NA	22	True	AATAAA	-23	NA	96679950	96698982	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96697441
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029282	chr11	+	1165	6	NNC	ENSMUSG00000018666.14	novel	1251	6	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	188	junction_5	206.095705923243	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGATTTCTGTCTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	96679960	96698975	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96697441_96697591_96698628
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029308	chr11	+	958	1	ISM	ENSMUSG00000018666.14	ENSMUST00000134585.8	2377	5	18055	0	17943	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGATTTCTGTCTTTTT	4409	False	NA	15	True	AATAAA	-16	NA	96698017	96698975	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_+_96698000_96699000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029314	chr11	-	3584	4	FSM	ENSMUSG00000038615.18	ENSMUST00000167110.8	3547	4	-36	-1	-36	1	multi-exon	FALSE	canonical	3	378	junction_3	463.171914327955	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTCCCCCCTCTCCCTT	NA	False	NA	-5	True	AATAAA	-34	NA	96714875	96708238	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96714770
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029325	chr11	-	4583	5	FSM	ENSMUSG00000038615.18	ENSMUST00000167149.8	4596	5	9	4	8	-4	multi-exon	FALSE	canonical	3	79	junction_4	530.254891538023	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCACTTTCTCCCCCCTCT	NA	False	NA	-10	True	AATAAA	-29	NA	96720319	96708243	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720236
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029369	chr11	-	3527	4	NNC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	-30	0	intron_retention	FALSE	canonical	3	133	junction_3	578.474430434627	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96714869	96708256	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_96711343_96712076_96712236_96712929_96713113_96714770
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029387	chr11	-	3950	4	NNC	ENSMUSG00000038615.18	novel	4219	4	NA	NA	-33	0	intron_retention	FALSE	canonical	3	150	junction_3	570.471345078397	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96714872	96708256	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96714383
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029396	chr11	-	3088	1	NIC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	2207	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	2072	False	NA	-23	True	AATAAA	-16	NA	96711344	96708256	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_96708300_96711300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029409	chr11	+	920	9	FSM	ENSMUSG00000018672.16	ENSMUST00000018816.14	930	9	0	10	0	-10	multi-exon	FALSE	canonical	3	213	junction_8	11.8420595759353	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCAAAGACCTCCTTT	775	False	NA	1	True	AATAAA	-12	NA	96740701	96752019	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_96740823_96741498_96741568_96744260_96744343_96744883_96744976_96745409_96745466_96746081_96746160_96747497_96747550_96748378_96748418_96751688
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029412	chr11	+	186	1	Intergenic	novelGene_962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCCAGGGACAGCCTTG	698	False	NA	NA	False	NA	NA	NA	96747788	96747974	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_96747800_96748000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029419	chr11	-	183	1	Intergenic	novelGene_963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTTTAATATGTATTTC	NA	False	NA	NA	False	NA	NA	NA	96749862	96749679	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_96749700_96749900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029445	chr11	-	1979	13	ISM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	98	360	-6	30	intron_retention	FALSE	canonical	3	982	junction_6	81.183776430735	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGAGCCTGCTTGAAGTT	NA	False	NA	-11	True	AATAAA	-45	NA	96807224	96798611	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029453	chr11	-	1954	13	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	831	junction_12	109.66473529201	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807240	96798641	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029470	chr11	+	201	1	Antisense	novelGene_ENSMUSG00000085307.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAAACTTCTATCTCCA	5051	False	NA	NA	False	NA	NA	NA	96812848	96813049	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr11_+_96812800_96813000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029479	chr11	-	2028	7	FSM	ENSMUSG00000018659.13	ENSMUST00000018803.12	1994	7	-32	-2	-32	2	multi-exon	FALSE	canonical	3	181	junction_4	10.434983894999	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAACTTGATTCCATTT	NA	False	NA	0	True	AATAAA	-27	NA	96834844	96828648	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_96829910_96830080_96830152_96830473_96830603_96830841_96830896_96831681_96831782_96833235_96833361_96834556
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029514	chr11	+	182	1	Intergenic	novelGene_964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAACAAAAGCCCCACAAA	2257	False	NA	NA	False	NA	NA	NA	96857520	96857702	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_96857500_96857700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029523	chr11	+	1537	8	FSM	ENSMUSG00000020877.12	ENSMUST00000021249.11	1530	8	-5	-2	-5	2	multi-exon	FALSE	canonical	3	80	junction_5	16.9597362320652	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATCTCAAGTCTATTGA	NA	False	NA	19	True	AATAAA	-25	NA	96920758	96924786	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_96920882_96921241_96921416_96921705_96921888_96922914_96923115_96923580_96923797_96923889_96924056_96924144_96924326_96924491
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029537	chr11	+	1693	5	FSM	ENSMUSG00000001445.11	ENSMUST00000001485.10	1708	5	15	0	15	0	multi-exon	FALSE	canonical	3	440	junction_1	35.8643276808586	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTATGTTTATATCTGTA	888	False	NA	10	True	NA	NA	NA	96932400	96940039	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_96932479_96935353_96935524_96937855_96938021_96938238_96938384_96938904
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029551	chr11	+	203	1	Intergenic	novelGene_965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCGTCTAGAGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	96943984	96944187	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_96944000_96944200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029563	chr11	+	192	1	Intergenic	novelGene_966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTAGCCATCTTTCTGAC	NA	False	NA	NA	False	NA	NA	NA	96981134	96981326	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_96981100_96981300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029579	chr11	+	183	1	Intergenic	novelGene_967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGTGATTTTATATCAT	NA	False	NA	NA	False	NA	NA	NA	97007434	97007617	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_97007400_97007600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029594	chr11	-	1354	1	Genic_Genomic	ENSMUSG00000001440.6	novel	NA	NA	NA	NA	3156	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCTGCTTCGTTCTTTG	NA	False	NA	-3	True	AATAAA	-26	NA	97051892	97050538	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr11_-_97050500_97051900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029620	chr11	-	228	1	Intergenic	novelGene_968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAAACTTTTAAAAGATGA	NA	False	NA	NA	False	NA	NA	NA	97094919	97094691	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_97094700_97094900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029633	chr11	-	4178	23	FSM	ENSMUSG00000001441.14	ENSMUST00000001480.14	4215	23	39	-2	-29	0	multi-exon	FALSE	canonical	3	268	junction_18	36.1553409289133	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGGCCTGGTTCTTTC	NA	False	NA	0	True	AATAAA	-15	NA	97171425	97096667	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029644	chr11	-	221	1	Intergenic	novelGene_969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGCAAGGATCTGGGT	8356	False	NA	NA	False	AATAAA	-23	NA	97106973	97106752	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_97106800_97107000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029647	chr11	+	198	1	Intergenic	novelGene_970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATCTCTCTGCCTGCCTC	NA	False	NA	NA	False	NA	NA	NA	97115756	97115954	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_97115800_97116000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029657	chr11	+	223	1	Intergenic	novelGene_971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGGAAAAAAAGAACATGATT	NA	False	NA	NA	False	ATTAAA	-20	NA	97199312	97199535	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_97199300_97199500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029668	chr11	+	2352	8	FSM	ENSMUSG00000018882.13	ENSMUST00000019026.10	2431	8	94	-15	94	15	multi-exon	FALSE	canonical	3	2561	junction_3	172.211545276531	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTTATCTTATTTTATA	NA	False	NA	29	True	NA	NA	NA	97206635	97220761	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97216584_97217607_97217758_97218911_97219086_97219307
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029675	chr11	+	1656	8	NNC	ENSMUSG00000018882.13	novel	2431	8	NA	NA	-52	-809	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_5	1010.03465287088	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTTCTGTACATTTT	NA	False	NA	NA	False	AATAAA	-24	NA	97206681	97219937	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97216584_97217433_97217758_97218911_97219086_97219307
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029696	chr11	+	193	1	Intergenic	novelGene_972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAGATGCCCATGAGCA	NA	False	NA	NA	False	NA	NA	NA	97209526	97209719	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_97209500_97209700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029701	chr11	+	195	1	Intergenic	novelGene_973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCAACCGCCGGGCAGT	NA	False	NA	NA	False	NA	NA	NA	97232687	97232882	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_97232700_97232900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029713	chr11	+	202	1	Intergenic	novelGene_974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAAGCCTTGACAGTAAC	1518	False	NA	NA	False	NA	NA	NA	97317372	97317574	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_97317400_97317600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029720	chr11	+	160	1	Intergenic	novelGene_975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAGGGAAAGTAAAA	NA	False	NA	NA	False	NA	NA	NA	97484296	97484456	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_97484300_97484500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029724	chr11	+	177	1	Intergenic	novelGene_976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCGGAGCAAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	97485948	97486125	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_97485900_97486100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029733	chr11	+	198	1	Intergenic	novelGene_977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACTTATAGACAAAGCC	NA	False	NA	NA	False	NA	NA	NA	97511286	97511484	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_97511300_97511500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029754	chr11	-	184	1	Intergenic	novelGene_978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCTGGGAAGTTCGGCC	9718	False	NA	NA	False	NA	NA	NA	97523443	97523259	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_97523300_97523400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029758	chr11	-	186	1	Intergenic	novelGene_979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCAGAATTTTCACTGGG	9008	False	NA	NA	False	NA	NA	NA	97524153	97523967	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_97524000_97524200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029760	chr11	-	183	1	Intergenic	novelGene_980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTTGATCCCAAGAGA	7741	False	NA	NA	False	NA	NA	NA	97525420	97525237	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_97525200_97525400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029793	chr11	-	209	1	Genic_Genomic	ENSMUSG00000018537.17	novel	NA	NA	NA	NA	2010	33	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCCTGGTGCAGAACCCC	NA	False	NA	NA	False	NA	NA	NA	97588200	97587991	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr11_-_97588000_97588200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029799	chr11	+	916	6	FSM	ENSMUSG00000069744.8	ENSMUST00000103147.5	766	6	-141	-9	-141	9	multi-exon	FALSE	canonical	3	3867	junction_2	170.920566345891	448	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTTTGTTTCTGCA	NA	False	NA	31	True	AATAAA	-24	NA	97594083	97604335	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_97594317_97594613_97594799_97597623_97597732_97601927_97602106_97603262_97603358_97604218
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029813	chr11	-	155	1	Intergenic	novelGene_981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTTCCTTCCTTCCTTC	3922	False	NA	NA	False	NA	NA	NA	97625809	97625654	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_97625700_97625800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029822	chr11	-	3107	10	FSM	ENSMUSG00000018541.11	ENSMUST00000018685.9	3105	10	0	-2	0	2	multi-exon	FALSE	canonical	3	107	junction_2	12.1969435556112	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGTAGAGCGATCTACCA	7435	False	NA	-19	True	AATAAA	-21	NA	97657382	97636438	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_97638296_97638786_97638949_97641697_97641788_97643395_97643590_97644041_97644106_97644730_97644859_97646976_97647047_97648398_97648636_97654034_97654208_97657250
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029828	chr11	+	168	1	Intergenic	novelGene_982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTTTTCAAGACAGGG	NA	False	NA	NA	False	NA	NA	NA	97649169	97649337	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_97649200_97649300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029831	chr11	-	1079	5	FSM	ENSMUSG00000071415.7	ENSMUST00000103146.5	1059	5	-19	-1	-19	1	multi-exon	FALSE	canonical	3	11120	junction_4	1307.0006455622	751	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGAGTGCTTGAGAA	NA	False	NA	-8	True	AATAAA	-18	NA	97673282	97668351	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_97668991_97669090_97669205_97672159_97672289_97672631_97672716_97673169
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029845	chr11	+	198	1	Intergenic	novelGene_983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCACAAACTGCCCTTCTA	NA	False	NA	NA	False	NA	NA	NA	97681827	97682025	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_97681800_97682000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029858	chr11	+	3470	7	FSM	ENSMUSG00000038366.16	ENSMUST00000043843.12	3540	7	71	-1	-36	1	multi-exon	FALSE	canonical	3	479	junction_6	89.534754270184	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGCTTCTTCCTCTTTGA	4527	False	NA	11	True	AATAAA	-22	NA	97690461	97729591	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_97690689_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029873	chr11	+	3281	7	NIC	ENSMUSG00000038366.16	novel	758	3	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	237.309221621636	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGCTTCTTCCTCTTTGA	NA	False	NA	11	True	AATAAA	-22	NA	97697133	97729591	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_97697172_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029877	chr11	+	3297	7	NNC	ENSMUSG00000038366.16	novel	758	3	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	224.925913728647	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTAGGCTTCTTCCTCTTT	NA	False	NA	9	True	AATAAA	-20	NA	97697133	97729589	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_+_97697190_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029907	chr11	+	179	1	Intergenic	novelGene_984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTTTAAAAATTAGAGT	3350	False	NA	NA	False	NA	NA	NA	97771396	97771575	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_97771400_97771600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029911	chr11	-	214	1	Intergenic	novelGene_985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTATATTAATACTCTAATT	9896	False	NA	NA	False	AATAAA	-20	NA	97771820	97771606	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_97771600_97771800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029919	chr11	-	2904	14	FSM	ENSMUSG00000017417.15	ENSMUST00000017561.15	2881	14	-23	0	-23	0	multi-exon	FALSE	canonical	3	23	junction_9	6.65462423196374	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTCGCGCCTGCGTGTA	6837	False	NA	-7	True	AATAAA	-17	NA	97877293	97814063	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_97815434_97816638_97816800_97819259_97819296_97823032_97823166_97824800_97824862_97829355_97829438_97831638_97831735_97844708_97844809_97845576_97845696_97846226_97846350_97846924_97846995_97847248_97847393_97869328_97869508_97877063
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029926	chr11	-	173	1	Intergenic	novelGene_986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTTTTAAGA	NA	False	NA	NA	False	NA	NA	NA	97836739	97836566	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_97836600_97836700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029936	chr11	+	165	1	Intergenic	novelGene_987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATACTAGAAAGGGT	2347	False	NA	NA	False	NA	NA	NA	97843667	97843832	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_97843700_97843800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029946	chr11	+	188	1	Antisense	novelGene_ENSMUSG00000038352.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1036	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTACCAGATGCCGTGT	213	False	NA	18	True	NA	NA	NA	97884800	97884988	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr11_+_97884800_97885000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029974	chr11	+	752	6	FSM	ENSMUSG00000017404.13	ENSMUST00000017548.7	751	6	0	-1	0	1	multi-exon	FALSE	canonical	3	9068	junction_1	2898.60244945732	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGCTGCTGTGTCTTA	NA	False	NA	16	True	AATAAA	-34	NA	97917749	97921319	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_97917817_97918648_97918756_97919171_97919295_97920220_97920342_97920600_97920712_97921096
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029986	chr11	+	1504	5	ISM	ENSMUSG00000017404.13	ENSMUST00000092425.11	737	6	278	15	31	-15	3prime_fragment	FALSE	canonical	3	13947	junction_4	1138.33373291843	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCTTGTTTAGCAGTTT	NA	False	NA	0	True	AATAAA	-18	NA	97917813	97921303	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_+_97918756_97919171_97919295_97920220_97920342_97920600_97920712_97921096
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000029993	chr11	-	2956	11	FSM	ENSMUSG00000017400.11	ENSMUST00000017544.9	3050	11	94	0	94	0	multi-exon	FALSE	canonical	3	31	junction_9	5.98748695196908	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGCTTGGTGTATC	5453	False	NA	-2	True	ATTAAA	-15	NA	97944194	97927448	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_97928897_97930444_97930583_97930923_97930976_97931247_97931346_97931964_97932027_97932129_97932203_97932292_97932406_97933354_97933446_97933582_97933681_97934305_97934613_97943718
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030003	chr11	+	5683	1	Intergenic	novelGene_988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGAGTGCTCTTCCAGA	NA	False	NA	NA	False	NA	NA	NA	97958413	97964096	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_97958400_97964100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030020	chr11	-	2492	15	NIC	ENSMUSG00000020883.19	novel	8601	15	NA	NA	-47	2388	combination_of_known_junctions	TRUE	canonical	3	15	junction_14	36.7548414137095	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTACCATCAGGGGACCC	2327	False	NA	-15	True	AATAAA	-17	NA	98041276	97979528	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040941
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030025	chr11	+	196	1	Intergenic	novelGene_989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAACCCGAAGACAGT	NA	False	NA	NA	False	NA	NA	NA	97984233	97984429	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_97984200_97984400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030028	chr11	+	188	1	Intergenic	novelGene_990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTACACCCTGTGGTTGT	7521	False	NA	NA	False	NA	NA	NA	98008201	98008389	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_98008200_98008400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030034	chr11	-	2821	18	NIC	ENSMUSG00000018160.16	novel	2627	18	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	3	22	junction_1	56.1624559050546	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCTCTGTGTTTTTTAT	NA	False	NA	NA	False	AATAAA	-42	NA	98084118	98042979	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_98043952_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030047	chr11	-	2526	18	NIC	ENSMUSG00000018160.16	novel	8024	17	NA	NA	0	294	combination_of_known_junctions	FALSE	canonical	3	134	junction_1	37.2323667653306	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCTGACCTTATTGCAG	NA	False	NA	-8	True	AATGAA	-15	NA	98084119	98048284	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_98048961_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030065	chr11	-	151	1	Intergenic	novelGene_991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATTTAAAGGGGC	NA	False	NA	NA	False	NA	NA	NA	98053591	98053440	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_98053400_98053600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030082	chr11	+	205	1	Intergenic	novelGene_992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATTAATGGAACTGAGTA	NA	False	NA	NA	False	NA	NA	NA	98097327	98097532	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_98097300_98097500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030085	chr11	+	202	1	Intergenic	novelGene_993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAAGCCTCCTCCTCTCTT	NA	False	NA	NA	False	NA	NA	NA	98159972	98160174	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_98160000_98160200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030092	chr11	+	176	1	Intergenic	novelGene_994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGTCAGAAACTTT	NA	False	NA	NA	False	NA	NA	NA	98231781	98231957	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_98231800_98232000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030093	chr11	+	2092	15	FSM	ENSMUSG00000018167.11	ENSMUST00000018311.5	2070	15	-6	-16	-6	3	multi-exon	TRUE	canonical	3	120	junction_11	11.573412528335	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATGGTGCATTCCTTTA	869	False	NA	14	True	AATAAA	-17	NA	98249187	98271941	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_98249335_98262895_98263169_98265905_98265984_98266301_98266380_98266500_98266555_98267315_98267434_98267577_98267677_98267890_98267947_98268275_98268369_98268981_98269045_98269160_98269257_98269563_98269644_98269719_98269825_98270798_98270893_98271283
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030112	chr11	+	168	1	Intergenic	novelGene_995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTGGTGAGATGGCTCA	NA	False	NA	NA	False	NA	NA	NA	98286414	98286582	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_98286400_98286600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030133	chr11	-	744	4	FSM	ENSMUSG00000002580.8	ENSMUST00000002655.8	747	4	-8	11	-8	-11	multi-exon	FALSE	canonical	3	749	junction_2	62.9567752950829	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTCAACTGGCGTGT	NA	False	NA	-10	True	AATAAA	-15	NA	98329825	98328544	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_98328972_98329062_98329140_98329472_98329571_98329683
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030147	chr11	-	181	1	Intergenic	novelGene_996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAATTCTCAGCTC	2571	False	NA	NA	False	NA	NA	NA	98382233	98382052	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_98382100_98382200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030150	chr11	-	2066	4	FSM	ENSMUSG00000038150.8	ENSMUST00000052919.8	2184	4	118	0	118	0	multi-exon	FALSE	canonical	3	195	junction_2	8.33999733546454	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCCTCTGCTTCCTG	1441	False	NA	1	True	AATAAA	-23	NA	98478076	98472081	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_98473674_98473961_98474114_98474767_98474967_98477953
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030167	chr11	+	2159	12	FSM	ENSMUSG00000017221.15	ENSMUST00000017365.15	2148	12	-10	-1	-10	1	multi-exon	FALSE	canonical	3	1019	junction_3	95.9435956889203	299	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGCACGGTGTCAGT	NA	False	NA	17	True	AATAAA	-15	NA	98573369	98586806	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98581480_98581741_98581846_98584208_98584324_98584404_98584525_98584630_98584735_98584963_98585120_98586188_98586240_98586348
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030175	chr11	-	3405	26	FSM	ENSMUSG00000017210.15	ENSMUST00000017354.13	3410	26	7	-2	7	2	multi-exon	TRUE	canonical	3	102	junction_19	25.7353919729232	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTGGGGACAGTTTC	NA	False	NA	0	True	AATAAA	-25	NA	98620254	98595414	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610_98619814_98620197
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030181	chr11	-	3383	26	NIC	ENSMUSG00000017210.15	novel	3410	26	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	29	junction_25	34.6175446847404	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTGTGTGGGGACAGT	NA	False	NA	-3	True	AATAAA	-22	NA	98620244	98595417	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610_98619814_98620206
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030200	chr11	-	227	1	Intergenic	novelGene_997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGCATTGAATAATAGGC	NA	False	NA	NA	False	AATAAA	-22	NA	98602953	98602726	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_98602700_98603000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030209	chr11	-	2695	8	FSM	ENSMUSG00000020889.12	ENSMUST00000064941.7	2721	8	26	0	26	0	multi-exon	FALSE	canonical	3	30	junction_7	7.40104791256493	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCTTCTGTGATGTGTG	NA	False	NA	0	True	NA	NA	NA	98666133	98658757	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_98659246_98659874_98660086_98660528_98660715_98661013_98661658_98662025_98662171_98662262_98662352_98662618_98662961_98665543
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030219	chr11	+	3757	14	FSM	ENSMUSG00000078676.10	ENSMUST00000169695.2	3741	14	-15	-1	-15	1	multi-exon	FALSE	canonical	3	273	junction_12	18.9446406216646	321	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGGCCAGTTATTGTG	267	False	NA	15	True	AATAAA	-20	NA	98700618	98724633	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_98700918_98701284_98701313_98701723_98701762_98712256_98712410_98712485_98712638_98713186_98713364_98713545_98714226_98718397_98718463_98719380_98719496_98719685_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030227	chr11	-	181	1	Intergenic	novelGene_998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAACAGTCGGGCAGTGG	NA	False	NA	NA	False	NA	NA	NA	98751106	98750925	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_98750900_98751100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030230	chr11	+	4626	12	FSM	ENSMUSG00000017499.16	ENSMUST00000092706.13	4614	12	-6	-6	-6	2	multi-exon	FALSE	canonical	3	550	junction_4	61.3919799860826	211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTCTGCCATTTCTGG	11	False	NA	NA	False	AATAAA	-24	NA	98798620	98814768	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802213_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498_98811640_98811941
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030254	chr11	+	3344	9	FSM	ENSMUSG00000037992.17	ENSMUST00000107475.9	2469	9	-95	-780	-95	0	multi-exon	FALSE	canonical	3	106	junction_2	61.7220331405245	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTTGCCTCTCTGCCT	NA	False	NA	14	True	AATAAA	-19	NA	98828428	98865768	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_98828706_98841070_98841622_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030264	chr11	+	3222	8	FSM	ENSMUSG00000037992.17	ENSMUST00000107473.3	3238	8	13	3	13	-3	multi-exon	FALSE	canonical	3	97	junction_1	54.9043695521437	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGCCTCTTGCCTCTCTG	7451	False	NA	11	True	AATAAA	-16	NA	98851250	98865765	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_98851960_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030273	chr11	+	159	1	Intergenic	novelGene_999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGAGTTGGTGAGATGGC	NA	False	NA	NA	False	NA	NA	NA	98881230	98881389	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_98881200_98881400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030305	chr11	-	5134	36	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	364.786754593051	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCCATTCCTCTTATTT	NA	False	NA	-4	True	AATAAA	-18	NA	98915016	98883772	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_98884152_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900614_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030315	chr11	-	5218	36	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-4	-4	combination_of_known_junctions	FALSE	canonical	3	633	junction_4	229.626625065073	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCCATTCCTCTTATTT	NA	False	NA	-4	True	AATAAA	-18	NA	98915019	98883772	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030322	chr11	-	5572	35	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-8	-4	intron_retention	FALSE	canonical	3	633	junction_3	222.753904349877	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCCATTCCTCTTATTT	NA	False	NA	-4	True	AATAAA	-18	NA	98915023	98883772	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030328	chr11	-	5570	35	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	1094	junction_3	172.605656925746	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCCATTCCTCTTATTT	NA	False	NA	-4	True	AATAAA	-18	NA	98915018	98883772	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030347	chr11	+	179	1	Intergenic	novelGene_1000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAGTCTAGCTAAATT	NA	False	NA	6	True	NA	NA	NA	99002677	99002856	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_99002700_99002900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030371	chr11	+	188	1	Intergenic	novelGene_1001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTATACTGGGCTCCAAA	NA	False	NA	NA	False	NA	NA	NA	99135414	99135602	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_99135400_99135600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030379	chr11	-	1500	8	FSM	ENSMUSG00000035557.10	ENSMUST00000080893.7	1551	8	0	51	0	-51	multi-exon	FALSE	canonical	3	34	junction_4	2.1946130708196	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAACTGTGGCCTTTGTTC	NA	False	NA	-3	True	ATTAAA	-16	NA	100151855	100147093	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_100147323_100148145_100148172_100148258_100148480_100148568_100148695_100149234_100149397_100149998_100150156_100150520_100150604_100151359
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030390	chr11	-	1641	8	FSM	ENSMUSG00000053654.8	ENSMUST00000017270.8	1542	8	-102	3	-102	-3	multi-exon	FALSE	canonical	3	51	junction_5	18.9510648023497	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCCTTGAATTCATCATT	NA	False	NA	-14	True	AATAAA	-15	NA	100160799	100153715	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_100153994_100154119_100154170_100155303_100155525_100155754_100155881_100156425_100156588_100157760_100157918_100158025_100158109_100160235
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030401	chr11	-	175	1	Intergenic	novelGene_1002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCACCAAACCCACAGCCT	9637	False	NA	NA	False	NA	NA	NA	100194654	100194479	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_100194500_100194700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030405	chr11	-	205	1	Intergenic	novelGene_1003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGCATGAAGGGGTCATG	8655	False	NA	NA	False	NA	NA	NA	100195636	100195431	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_100195400_100195600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030409	chr11	+	1229	4	FSM	ENSMUSG00000035530.14	ENSMUST00000049385.14	1322	4	99	-6	99	6	multi-exon	FALSE	canonical	3	11207	junction_1	646.711854091312	2940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAGATTGCACTTGGTC	4056	False	NA	27	True	AATAAA	-23	NA	100210809	100212928	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_100210987_100211491_100211656_100211773_100211876_100212142
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030419	chr11	+	1487	3	ISM	ENSMUSG00000035530.14	ENSMUST00000049385.14	1322	4	101	1	101	-1	intron_retention	FALSE	canonical	3	11207	junction_1	507	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGATGTCCAGATTGCA	4058	False	NA	20	True	AATAAA	-16	NA	100210811	100212921	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_+_100210987_100211491_100211656_100211773
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030428	chr11	+	2110	1	NIC	ENSMUSG00000035530.14	novel	1322	4	NA	NA	101	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGATGTCCAGATTGCA	4058	False	NA	20	True	AATAAA	-16	NA	100210811	100212921	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_100210800_100212900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030443	chr11	+	1142	3	FSM	ENSMUSG00000035530.14	ENSMUST00000139846.2	447	3	51	-746	51	-1	multi-exon	FALSE	canonical	3	12221	junction_1	273.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGATGTCCAGATTGCA	4641	False	NA	20	True	AATAAA	-16	NA	100211394	100212921	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_100211656_100211773_100211876_100212142
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030449	chr11	+	215	1	Intergenic	novelGene_1004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCAACTTAAGGGCTGG	7335	False	NA	NA	False	NA	NA	NA	100214088	100214303	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_100214100_100214300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030455	chr11	-	3673	11	FSM	ENSMUSG00000006930.16	ENSMUST00000103124.11	2120	11	-19	-1534	-19	2	multi-exon	FALSE	canonical	3	486	junction_1	44.9070150421958	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTCAGTTGTGTTCC	2029	False	NA	0	True	AATAAA	-19	NA	100246932	100238150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030470	chr11	-	3481	12	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	-1	0	intron_retention	FALSE	canonical	3	58	junction_1	152.849301898665	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	2047	False	NA	-2	True	AATAAA	-17	NA	100246914	100238152	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_100239306_100239477_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030479	chr11	-	3626	11	NIC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	-1	0	intron_retention	FALSE	canonical	3	67	junction_3	157.502507916541	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	2047	False	NA	-2	True	AATAAA	-17	NA	100246914	100238152	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_100240446_100242035_100242128_100242243_100242352_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030485	chr11	-	3654	11	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	37	junction_3	166.15787673174	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	2049	False	NA	-2	True	AATAAA	-17	NA	100246912	100238152	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_100240446_100242035_100242128_100242243_100242382_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030490	chr11	-	3100	13	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_2	196.783863385413	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCCTGTCTCAGTTGTG	2049	False	NA	-4	True	AATAAA	-15	NA	100246912	100238154	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_100239306_100239477_100239686_100240062_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030493	chr11	-	3631	11	NIC	ENSMUSG00000006930.16	novel	2120	11	NA	NA	1	-2	intron_retention	FALSE	canonical	3	47	junction_1	163.083567535175	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCCTGTCTCAGTTGTG	2049	False	NA	-4	True	AATAAA	-15	NA	100246912	100238154	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_100240428_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030506	chr11	-	552	1	FSM	ENSMUSG00000091478.3	ENSMUST00000081241.2	411	1	-26	-115	-26	115	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGCCTGTGCCTGTCT	8050	False	NA	NA	False	NA	NA	NA	100252978	100252426	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_100252400_100253000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030543	chr11	+	194	1	Intergenic	novelGene_1005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGTTGGGGCTGCTA	NA	False	NA	NA	False	NA	NA	NA	100282463	100282657	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_100282500_100282700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030565	chr11	-	1402	9	FSM	ENSMUSG00000017176.18	ENSMUST00000092688.12	1399	9	-2	-1	-2	1	multi-exon	FALSE	canonical	3	274	junction_8	92.107868149252	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACGCGTCTTTAATCCCA	NA	False	NA	-1	True	ATTAAA	-20	NA	100331917	100320177	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331654_100331754_100331869
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030620	chr11	+	2333	4	FSM	ENSMUSG00000006782.17	ENSMUST00000103120.5	2357	4	24	0	24	0	multi-exon	FALSE	canonical	3	73	junction_2	8.2192186706253	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCTATCACTCTTG	NA	False	NA	19	True	AATAAA	-15	NA	100465753	100472554	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_100465895_100467061_100467732_100469738_100469879_100471172
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030626	chr11	-	1901	14	FSM	ENSMUSG00000014195.17	ENSMUST00000014339.15	2330	14	450	-21	-59	21	multi-exon	FALSE	canonical	3	2240	junction_1	249.671049855795	821	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTCTGTACCTGAGGTT	5832	False	NA	0	True	AATAAA	-36	NA	100510544	100473622	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030651	chr11	+	2929	1	Intergenic	novelGene_1006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGGGGTTGGAGAGATAGC	NA	False	NA	NA	False	AATAAA	-10	NA	100499330	100502259	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_100499300_100502300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030653	chr11	+	2103	4	FSM	ENSMUSG00000017837.13	ENSMUST00000017981.10	2097	4	-3	-3	-3	3	multi-exon	FALSE	canonical	3	328	junction_1	10.0332779621949	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCCCCTACCCCTTTT	NA	False	NA	20	True	AATAAA	-27	NA	100513698	100518436	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_100513835_100515017_100515126_100515768_100516011_100516819
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030670	chr11	-	3060	18	FSM	ENSMUSG00000020918.15	ENSMUST00000006973.12	3043	18	-17	0	-17	0	multi-exon	FALSE	canonical	3	387	junction_12	55.3609733498447	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATTGTTTTTTGGGGGG	6762	False	NA	-1	True	AATAAA	-18	NA	100603308	100595571	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030677	chr11	-	3050	18	FSM	ENSMUSG00000020918.15	ENSMUST00000103118.4	3046	18	-4	0	-4	0	multi-exon	FALSE	canonical	3	120	junction_10	104.829867108865	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATTGTTTTTTGGGGGG	6775	False	NA	-1	True	AATAAA	-18	NA	100603295	100595571	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599812_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030704	chr11	-	2470	9	FSM	ENSMUSG00000017747.14	ENSMUST00000017891.14	2462	9	-2	-6	-2	6	multi-exon	FALSE	canonical	3	37	junction_7	5.82961190818051	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTATTTTATGTTATC	NA	False	NA	NA	False	NA	NA	NA	100661785	100656851	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_100657851_100658109_100658196_100658839_100658974_100659043_100659116_100659210_100659404_100659853_100660356_100660481_100660604_100660895_100661177_100661704
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030709	chr11	-	4900	19	FSM	ENSMUSG00000020919.12	ENSMUST00000004143.3	5062	19	164	-2	-22	2	multi-exon	TRUE	canonical	3	41	junction_6	7.16386680880661	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTCCTGTTTCCTTTCC	NA	False	NA	2	True	AATAAA	-23	NA	100741386	100671554	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_100674049_100674497_100674603_100675078_100675131_100678034_100678206_100679194_100679326_100679492_100679588_100681572_100681780_100685369_100685463_100687244_100687368_100687443_100687532_100687889_100688070_100688471_100688628_100689059_100689212_100689416_100689548_100692232_100692408_100693264_100693355_100695695_100695853_100699221_100699360_100741224
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030716	chr11	+	200	1	Intergenic	novelGene_1007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	843	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGAAACAGCTTAATG	NA	False	NA	NA	False	NA	NA	NA	100704049	100704249	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_100704000_100704200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030744	chr11	-	4424	24	FSM	ENSMUSG00000004040.17	ENSMUST00000092671.12	2927	24	-71	-1426	28	0	multi-exon	FALSE	canonical	3	73	junction_3	102.661666503989	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCAGTGGGGGCTGGCTGG	NA	False	NA	-4	True	AATAAA	-19	NA	100830277	100777635	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_100779587_100780303_100780417_100780711_100780755_100783902_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030746	chr11	-	4455	24	FSM	ENSMUSG00000004040.17	ENSMUST00000127638.8	4516	24	61	0	0	0	multi-exon	FALSE	canonical	3	387	junction_2	54.0525544164325	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCAGTGGGGGCTGGCTGG	NA	False	NA	-4	True	AATAAA	-19	NA	100830305	100777635	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_100779587_100780303_100780417_100780711_100780755_100783899_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030767	chr11	+	3992	21	NIC	ENSMUSG00000019302.17	novel	4008	22	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	127	junction_18	25.9536124653197	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCTCTGAGTGTGTG	NA	False	NA	19	True	AATAAA	-24	NA	100900277	100954547	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100945851_100945970_100946259_100946432_100953137
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030782	chr11	+	3976	22	FSM	ENSMUSG00000019302.17	ENSMUST00000044721.13	4008	22	32	0	-3	0	multi-exon	FALSE	canonical	3	32	junction_19	48.1567734584863	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTCTCTGAGTGTG	NA	False	NA	17	True	AATAAA	-22	NA	100900309	100954545	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100940284_100940303_100945851_100945970_100946259_100946432_100953137
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030792	chr11	+	2098	10	FSM	ENSMUSG00000001755.13	ENSMUST00000001806.10	2138	10	41	-1	-12	1	multi-exon	FALSE	canonical	3	106	junction_1	26.2908705931015	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTGGTTTTCTGTTT	3552	False	NA	26	True	ATTAAA	-17	NA	100973431	100977446	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_100973517_100973824_100974533_100975141_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030805	chr11	+	2346	9	FSM	ENSMUSG00000001755.13	ENSMUST00000107308.4	2386	9	38	2	38	-2	multi-exon	FALSE	canonical	3	125	junction_1	20.9388992069784	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTGTGTGGTTTTCTG	3609	False	NA	23	True	ATTAAA	-14	NA	100973488	100977443	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_100974533_100975141_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030809	chr11	+	1848	8	FSM	ENSMUSG00000017801.16	ENSMUST00000107302.8	1826	8	-22	0	-22	0	multi-exon	FALSE	canonical	0	0	junction_1	91.1912097446562	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTTTTAAGTCCTTGT	8201	False	NA	18	True	AATAAA	-22	NA	100978080	100983033	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_100978194_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030821	chr11	+	1966	8	FSM	ENSMUSG00000017801.16	ENSMUST00000017945.15	1965	8	-1	0	-1	0	multi-exon	FALSE	canonical	3	155	junction_1	39.4052726193346	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTTTTAAGTCCTTGT	8245	False	NA	18	True	AATAAA	-22	NA	100978124	100983033	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_100978356_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030832	chr11	-	968	8	FSM	ENSMUSG00000019303.15	ENSMUST00000019447.15	1291	8	3	320	3	-11	multi-exon	FALSE	canonical	3	316	junction_7	41.1021624139417	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATCAAACCTCCCAGAT	NA	False	NA	-7	True	TATAAA	-19	NA	100986259	100982968	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984619_100985761_100985852_100985983_100986085_100986168
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030839	chr11	-	3114	9	FSM	ENSMUSG00000017802.15	ENSMUST00000017946.6	3165	9	52	-1	2	1	multi-exon	FALSE	canonical	3	80	junction_5	11.6162601554889	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTCGTTGTGTACTT	9847	False	NA	2	True	AATAAA	-30	NA	101010667	100987337	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_100989447_100989833_100989967_100990498_100990582_100991747_100991886_100992831_100992917_100993708_100993836_100994715_100994747_100997132_100997240_101010366
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030864	chr11	-	3026	13	FSM	ENSMUSG00000035172.16	ENSMUST00000043397.14	3056	13	30	0	-4	0	multi-exon	FALSE	canonical	3	20	junction_4	15.6142740963375	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCCTGTGGGAGTGTTG	721	False	NA	3	True	AAGAAA	-22	NA	101062147	101053504	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_101053891_101054331_101054524_101054838_101055298_101055484_101055618_101055876_101056014_101056309_101056518_101057179_101057487_101058275_101058397_101058500_101058659_101058743_101058936_101059040_101059121_101059467_101059524_101061550
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030871	chr11	-	3018	13	FSM	ENSMUSG00000035172.16	ENSMUST00000164474.8	3010	13	-5	-3	-5	0	multi-exon	FALSE	canonical	3	27	junction_4	14.3843568581366	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCCTGTGGGAGTGTTG	720	False	NA	3	True	AAGAAA	-22	NA	101062148	101053504	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_101053891_101054331_101054524_101054838_101055298_101055484_101055618_101055885_101056014_101056309_101056518_101057179_101057487_101058275_101058397_101058500_101058659_101058743_101058936_101059040_101059121_101059467_101059524_101061550
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030884	chr11	-	4179	21	NIC	ENSMUSG00000006920.15	novel	4207	21	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_19	32.178059295116	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCAAGTTGTGTCCTC	2638	False	NA	-7	True	AATAAA	-15	NA	101117256	101081940	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108195_101109479_101109547_101117221
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030901	chr11	+	1089	6	FSM	ENSMUSG00000078656.12	ENSMUST00000042477.13	1106	6	19	-2	-3	2	multi-exon	FALSE	canonical	3	1136	junction_3	45.4682306671372	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGTTACTACTGCTGAA	NA	False	NA	22	True	ATTAAA	-19	NA	101144551	101150377	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_101144634_101144856_101145003_101145768_101145823_101146834_101146924_101147703_101147780_101149735
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030916	chr11	-	734	2	FSM	ENSMUSG00000017188.4	ENSMUST00000017332.4	886	2	157	-5	-14	5	multi-exon	FALSE	canonical	3	1870	junction_1	0	311	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGTGTGTGGGGGCAGAG	5659	False	NA	0	True	AATAAA	-25	NA	101169783	101168788	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_101169279_101169539
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030936	chr11	-	2658	11	FSM	ENSMUSG00000035086.14	ENSMUST00000122817.8	2662	11	4	0	-1	0	multi-exon	FALSE	canonical	3	416	junction_7	42.6812605249658	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGGTACGCCTGTATG	NA	False	NA	-2	True	AATAAA	-25	NA	101193082	101179087	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185795_101185991_101186120_101186258_101186359_101187143_101189834_101189903_101192553_101192683_101192957
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030988	chr11	-	188	1	Intergenic	novelGene_1008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAAAGTCCTTTTGAGCT	NA	False	NA	NA	False	NA	NA	NA	101279512	101279324	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_101279300_101279500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000030994	chr11	-	1519	12	FSM	ENSMUSG00000075528.14	ENSMUST00000070395.9	1516	12	173	-176	-36	176	multi-exon	FALSE	canonical	3	448	junction_11	68.1448384565145	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGTATAGTTGCTTA	NA	False	NA	0	True	ATTAAA	-41	NA	101308268	101297488	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302026_101302119_101302277_101302765_101302824_101304762_101304923_101307928_101308061_101308175
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031008	chr11	+	3220	5	FSM	ENSMUSG00000035007.6	ENSMUST00000040561.6	3223	5	-4	7	-4	-7	multi-exon	FALSE	canonical	3	47	junction_3	4.27200187265877	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATAGCTCCTCTGCACT	NA	False	NA	28	True	AATAAA	-32	NA	101315906	101326492	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_101316437_101320277_101320437_101322173_101322373_101322907_101323025_101324277
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031021	chr11	+	197	1	Intergenic	novelGene_1009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGGGCTATGAGGAACA	1904	False	NA	NA	False	NA	NA	NA	101318826	101319023	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_101318800_101319000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031027	chr11	+	202	1	Intergenic	novelGene_1010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTAGGTAGGAGAGAGCA	7690	False	NA	NA	False	NA	NA	NA	101330738	101330940	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_101330700_101330900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031039	chr11	+	534	5	FSM	ENSMUSG00000063316.14	ENSMUST00000077856.13	614	5	85	-5	-55	5	multi-exon	FALSE	canonical	3	8302	junction_4	1985.8892844265	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGCCTATTGCATTTG	2326	False	NA	67	True	ATTAAA	-23	NA	101333208	101336360	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_101333283_101333548_101333632_101334326_101334497_101336045_101336157_101336264
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031045	chr11	+	732	4	FSM	ENSMUSG00000063316.14	ENSMUST00000107249.8	732	4	2	-2	2	2	multi-exon	FALSE	canonical	3	8302	junction_3	2031.83972465022	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGTCTGCCTATTGCAT	2391	False	NA	64	True	ATTAAA	-20	NA	101333273	101336357	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_101333632_101334326_101334497_101336045_101336157_101336264
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031055	chr11	-	2801	6	FSM	ENSMUSG00000034993.8	ENSMUST00000040430.8	2766	6	-23	-12	-23	12	multi-exon	TRUE	canonical	3	320	junction_5	13.7462722219517	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTATCTGAGAGTTGCT	NA	False	NA	1	True	AATAAA	-27	NA	101357079	101349558	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_101351103_101351202_101351445_101353023_101353114_101353215_101353387_101353734_101353943_101356533
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031080	chr11	+	210	1	Intergenic	novelGene_1011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATTAAACCAACGGCTG	2091	False	NA	NA	False	GATAAA	-7	NA	101372809	101373019	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_101372800_101373000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031085	chr11	-	6594	23	FSM	ENSMUSG00000017146.13	ENSMUST00000017290.11	6572	23	-9	-13	-9	13	multi-exon	FALSE	canonical	3	266	junction_5	36.2819537137853	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGATTGGGGGCCTGGT	NA	False	NA	2	True	AATAAA	-28	NA	101442714	101379576	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031118	chr11	+	4451	24	FSM	ENSMUSG00000017119.21	ENSMUST00000103098.9	4654	24	203	0	-1	0	multi-exon	TRUE	canonical	3	112	junction_17	38.3552196362625	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTGTTTATTGTTTAA	977	False	NA	21	True	AATAAA	-24	NA	101443682	101472777	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031120	chr11	+	4340	23	FSM	ENSMUSG00000017119.21	ENSMUST00000107213.8	4339	23	-1	0	-1	0	multi-exon	FALSE	canonical	3	94	junction_16	37.5030852725303	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTGTTTATTGTTTAA	977	False	NA	21	True	AATAAA	-24	NA	101443682	101472777	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031132	chr11	+	4219	22	NIC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	0	-5	intron_retention	FALSE	canonical	3	41	junction_21	53.0816766793681	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACCAAGCTGTTTATTG	987	False	NA	16	True	AATAAA	-19	NA	101443692	101472772	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101471410
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031145	chr11	+	216	1	Intergenic	novelGene_1012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTTTTAAAATTTGTTTA	NA	False	NA	NA	False	NA	NA	NA	101496421	101496637	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_101496400_101496600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031148	chr11	+	354	2	Intergenic	novelGene_1013	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	35	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAGAGCGAGCTCA	NA	False	NA	NA	False	NA	NA	NA	101511886	101512392	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_101511968_101512119
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031159	chr11	+	1129	7	FSM	ENSMUSG00000010362.10	ENSMUST00000010506.10	1124	7	-5	0	-5	0	multi-exon	FALSE	canonical	3	866	junction_2	120.614284210269	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGTGGTTTGGGTCCC	NA	False	NA	29	True	AATAAA	-28	NA	101518762	101526926	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_101518891_101519098_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613_101525700_101526573
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031171	chr11	+	1305	6	NIC	ENSMUSG00000010362.10	novel	1124	7	NA	NA	14	-13	intron_retention	FALSE	canonical	3	866	junction_1	132.095420056866	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTGTAAATAGTGTG	NA	False	NA	16	True	AATAAA	-15	NA	101518781	101526913	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613_101525700_101526573
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031179	chr11	+	203	1	Intergenic	novelGene_1014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAATTTTGAGAAAATGA	NA	False	NA	NA	False	NA	NA	NA	101534814	101535017	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_101534800_101535000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031185	chr11	+	183	1	Intergenic	novelGene_1015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGCTGTATCATAACAGA	NA	False	NA	NA	False	NA	NA	NA	101535764	101535947	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_101535800_101535900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031197	chr11	+	191	1	Intergenic	novelGene_1016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGTGAATAGGGCA	NA	False	NA	NA	False	NA	NA	NA	101573121	101573312	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_101573100_101573300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031204	chr11	+	201	1	Intergenic	novelGene_1017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAACCTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	101579476	101579677	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_101579500_101579700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031222	chr11	-	4181	3	FSM	ENSMUSG00000003518.14	ENSMUST00000003612.13	4212	3	31	0	10	0	multi-exon	FALSE	canonical	3	8	junction_1	3.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTCTGTTTTGTGTTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	101875594	101861968	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_101865766_101872442_101872670_101875437
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031234	chr11	-	1579	4	FSM	ENSMUSG00000020921.7	ENSMUST00000021296.7	1574	4	-5	0	-5	0	multi-exon	FALSE	canonical	3	250	junction_3	22.1710521977545	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTTTGCTTCTGTCT	4460	False	NA	0	True	AATAAA	-16	NA	102047235	102043371	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_102044421_102045382_102045530_102046549_102046731_102047033
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031245	chr11	-	2262	5	FSM	ENSMUSG00000020922.12	ENSMUST00000021297.6	2256	5	-5	-1	-5	1	multi-exon	FALSE	canonical	3	919	junction_1	21.856063231973	669	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTCTCAGGTTTGTGCG	6351	False	NA	0	True	AATAAA	-24	NA	102076127	102053321	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_102054994_102056185_102056313_102057912_102058023_102073683_102073818_102075908
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031264	chr11	+	1430	6	FSM	ENSMUSG00000034793.16	ENSMUST00000078975.8	1573	6	143	0	-14	0	multi-exon	TRUE	canonical	3	149	junction_4	4.31740662898458	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTCTTGTCTGTGCTC	NA	False	NA	5	True	AATAAA	-19	NA	102080637	102084907	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_102080970_102082860_102082968_102083298_102083390_102083574_102083694_102083910_102084053_102084268
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031271	chr11	-	3807	27	NIC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	1	78	junction_13	40.333300731889	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGTGTGCCGTGTGGGTC	NA	False	NA	-3	True	ATTAAA	-22	NA	102121010	102086572	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109314_102115559_102115782_102120830
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031281	chr11	-	3787	27	FSM	ENSMUSG00000008855.18	ENSMUST00000107152.9	3788	27	5	-4	5	0	multi-exon	TRUE	canonical	1	50	junction_25	47.7576630363989	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGTGTGCCGTGTGGGTC	NA	False	NA	-3	True	ATTAAA	-22	NA	102120987	102086572	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109317_102115559_102115782_102120830
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031301	chr11	+	2578	10	FSM	ENSMUSG00000034773.17	ENSMUST00000100392.5	2547	10	-31	0	-31	0	multi-exon	FALSE	canonical	3	289	junction_3	21.1502561056204	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCGTCCCACACCTCCT	NA	False	NA	15	True	AATAAA	-22	NA	102139676	102156013	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_102139919_102141504_102141556_102145779_102146848_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102150991_102151316_102151443_102153008_102153127_102155460
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031370	chr11	-	3164	21	NNC	ENSMUSG00000020923.18	novel	4692	21	NA	NA	367	3	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_20	179.182274513971	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGCTGCCGTCTCTGTTG	9374	False	NA	-6	True	NA	NA	NA	102209555	102196815	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102209404
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031374	chr11	-	3372	21	FSM	ENSMUSG00000020923.18	ENSMUST00000173870.8	2936	21	60	-496	60	3	multi-exon	FALSE	canonical	3	106	junction_20	170.388167136101	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGCTGCCGTCTCTGTTG	8421	False	NA	-6	True	NA	NA	NA	102210508	102196815	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102210149
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031404	chr11	-	3016	20	FSM	ENSMUSG00000020923.18	ENSMUST00000178839.8	4580	20	134	1430	134	2	multi-exon	FALSE	canonical	3	130	junction_19	207.277671834178	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	9141	False	NA	-7	True	NA	NA	NA	102209788	102196816	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102209673
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031418	chr11	+	199	1	Intergenic	novelGene_1018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGGGCAGTGGTGGCACA	NA	False	NA	NA	False	NA	NA	NA	102216343	102216542	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_102216300_102216500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031426	chr11	+	205	1	Intergenic	novelGene_1019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTAGAACTCTCAGCTCA	3659	False	NA	NA	False	NA	NA	NA	102280478	102280683	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_102280500_102280700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031446	chr11	-	2896	12	FSM	ENSMUSG00000018677.10	ENSMUST00000018821.9	1685	12	-37	-1174	-37	1174	multi-exon	TRUE	canonical	3	4398	junction_3	174.765959202208	1092	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGCTTGAGACACTGTGT	7651	False	NA	-10	True	ATTAAA	-23	NA	102298407	102292636	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031466	chr11	+	195	1	Intergenic	novelGene_1020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGTCAATGCTCTTAAC	5886	False	NA	NA	False	NA	NA	NA	102301357	102301552	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_102301400_102301600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031474	chr11	+	2193	13	FSM	ENSMUSG00000034708.13	ENSMUST00000049460.12	2331	13	143	-5	-53	3	multi-exon	FALSE	canonical	3	528	junction_1	53.84932682959	401	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGATTTGTTGCGCCAG	4281	False	NA	20	True	AATAAA	-22	NA	102321290	102327638	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_102321367_102323790_102323936_102324050_102324177_102324311_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326071_102326318_102326534_102326769_102326849_102327075_102327160
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031482	chr11	-	6874	8	FSM	ENSMUSG00000034621.15	ENSMUST00000143842.2	6871	8	1	-4	1	4	multi-exon	FALSE	canonical	3	114	junction_1	22.9658131018384	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGAGTCTGTTGTGATTGC	638	False	NA	1	True	AATAAA	-22	NA	102447024	102366736	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_102372914_102378325_102378457_102391628_102391773_102398268_102398356_102398969_102399038_102418919_102418993_102429107_102429183_102446905
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031499	chr11	+	190	1	Intergenic	novelGene_1021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACACATGTCCTTAAAGC	NA	False	NA	NA	False	NA	NA	NA	102543754	102543944	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_102543800_102543900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031519	chr11	-	1923	3	FSM	ENSMUSG00000034520.15	ENSMUST00000131164.2	247	3	28	-1704	-3	107	multi-exon	FALSE	canonical	3	62	junction_2	360	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTAAGATCTATCTATAG	NA	False	NA	-1	True	NA	NA	NA	102710008	102690297	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_102692022_102693666_102693743_102709885
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031538	chr11	-	2134	4	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	300.941854849072	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGTTAAAGGGTAATGT	NA	False	NA	-8	True	ATTAAA	-22	NA	102710004	102690404	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_102692022_102693666_102693743_102695106_102695339_102709795
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031570	chr11	-	3337	16	FSM	ENSMUSG00000051378.11	ENSMUST00000021311.10	3326	16	0	-11	0	11	multi-exon	FALSE	canonical	3	261	junction_10	31.928809700471	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGCTGATTTTTCTTT	3724	False	NA	4	True	AATAAA	-43	NA	102815950	102796343	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815808
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031586	chr11	-	1772	5	FSM	ENSMUSG00000020935.9	ENSMUST00000021313.9	1744	5	-21	-7	-21	7	multi-exon	FALSE	canonical	3	1121	junction_2	32.0965340808007	701	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCACTTGGCCTTTGTTCA	8172	False	NA	2	True	NA	NA	NA	102908015	102884865	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_102885999_102888178_102888267_102890469_102890674_102890975_102891183_102907875
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031617	chr11	+	2056	10	FSM	ENSMUSG00000056938.17	ENSMUST00000092559.13	2083	10	27	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	33.6455746177417	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	6	True	ATTAAA	-16	NA	102992534	103003026	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_102992615_102993507_102993923_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031623	chr11	+	1637	9	NIC	ENSMUSG00000056938.17	novel	2083	10	NA	NA	-4	0	intron_retention	FALSE	canonical	3	44	junction_1	32.3138902022025	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	6	True	ATTAAA	-16	NA	102993895	103003026	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_102993972_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031634	chr11	+	198	1	Intergenic	novelGene_1022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTGGGAACAAAACACCC	NA	False	NA	NA	False	NA	NA	NA	103011817	103012015	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_103011800_103012000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031641	chr11	-	196	1	Intergenic	novelGene_1023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTCTTTTAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	103041577	103041381	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_103041400_103041600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031657	chr11	-	5172	12	FSM	ENSMUSG00000034247.10	ENSMUST00000041272.10	5968	12	-18	814	-18	-814	multi-exon	TRUE	canonical	3	46	junction_6	16.0020659823186	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTTTCTGAATCTCAA	NA	False	NA	0	True	AGTAAA	-20	NA	103303531	103255914	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_103257820_103258423_103258582_103258933_103258998_103261687_103261882_103264765_103264912_103267418_103268340_103270859_103271179_103277783_103278175_103285513_103286141_103287852_103288101_103294650_103294737_103303418
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031668	chr11	+	185	1	Intergenic	novelGene_1024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACTCTGCACAGGGAGGC	NA	False	NA	NA	False	NA	NA	NA	103297125	103297310	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_103297100_103297300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031676	chr11	+	218	1	Intergenic	novelGene_1025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCCTGCTATCAATCAAG	2931	False	NA	NA	False	NA	NA	NA	103363420	103363638	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_103363400_103363600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031683	chr11	-	3089	6	FSM	ENSMUSG00000020946.14	ENSMUST00000021329.14	3266	6	177	0	-23	0	multi-exon	TRUE	canonical	3	264	junction_1	54.6867442804927	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGGCATTCTTTGTCT	NA	False	NA	2	True	AATAAA	-31	NA	103588547	103567674	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_103570224_103574617_103574759_103577407_103577541_103578350_103578460_103580080_103580146_103588455
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031688	chr11	-	2934	5	FSM	ENSMUSG00000020946.14	ENSMUST00000107013.3	1044	5	-16	-1874	-12	-3	multi-exon	FALSE	canonical	3	79	junction_1	134.545531326759	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCACTTGGCATTCTTTG	NA	False	NA	-1	True	AATAAA	-28	NA	103588536	103567677	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_103570224_103577407_103577541_103578350_103578460_103580080_103580146_103588455
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031708	chr11	+	196	1	Intergenic	novelGene_1026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTGCTGAGCAGTGTGA	9153	False	NA	NA	False	NA	NA	NA	103648134	103648330	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_103648100_103648300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031728	chr11	-	191	1	Intergenic	novelGene_1027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTAGCTCATTTCCTTC	NA	False	NA	NA	False	NA	NA	NA	103823266	103823075	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_103823100_103823300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031731	chr11	+	197	1	Intergenic	novelGene_1028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAACTATCTGCAGCT	NA	False	NA	NA	False	NA	NA	NA	103840657	103840854	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_103840700_103840900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031739	chr11	+	2260	5	FSM	ENSMUSG00000062421.14	ENSMUST00000057921.10	2242	5	-18	0	-18	0	multi-exon	FALSE	canonical	3	72	junction_4	7.43303437365925	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTCATGTTCTCCTGGA	NA	False	NA	31	True	AATAAA	-20	NA	103857546	103876163	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_103857654_103859904_103860072_103863778_103863890_103872519_103872645_103874413
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031755	chr11	+	2736	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8369	1696	at_least_one_novel_splicesite	FALSE	canonical	3	288	junction_1	100.158312186258	23	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACGCATGTATCTTGAAAT	9487	False	NA	NA	False	NA	NA	NA	104200489	104220957	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_+_104200605_104201094_104201361_104212176_104212259_104213253_104213367_104218797
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031773	chr11	-	5001	16	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-582	1	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_15	56.9102997903035	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCAGGCTTTTCTTGA	9750	False	NA	-1	True	NA	NA	NA	104360269	104224325	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104358464_104358579_104360243
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031777	chr11	-	4712	14	NNC	ENSMUSG00000018412.17	novel	5061	15	NA	NA	-582	0	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_10	70.7434735735703	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGCTTTTCTTG	9750	False	NA	-2	True	NA	NA	NA	104360269	104224326	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104358464_104358579_104360243
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031778	chr11	-	4811	15	NNC	ENSMUSG00000018412.17	novel	5061	15	NA	NA	-582	0	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_14	61.3522782039618	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGCTTTTCTTG	9750	False	NA	-2	True	NA	NA	NA	104360269	104224326	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104358464_104358579_104360243
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031790	chr11	-	4901	15	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-582	0	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_11	65.9480314880047	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGCTTTTCTTG	9750	False	NA	-2	True	NA	NA	NA	104360269	104224326	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104358464_104358579_104360243
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031818	chr11	-	182	1	Intergenic	novelGene_1029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCATGGCCCCCCACC	NA	False	NA	NA	False	NA	NA	NA	104279765	104279583	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_104279600_104279800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031823	chr11	+	204	1	Intergenic	novelGene_1030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGAGGGGGGAGGGGGG	5458	False	NA	NA	False	NA	NA	NA	104301923	104302127	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_104301900_104302100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031858	chr11	-	182	1	Intergenic	novelGene_1031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAACATAAAAAATAGCCAG	6441	False	NA	NA	False	NA	NA	NA	104539483	104539301	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_104539300_104539500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031860	chr11	-	183	1	Intergenic	novelGene_1032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAGGAAGGAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	104582624	104582441	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_104582400_104582600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031870	chr11	-	180	1	Intergenic	novelGene_1033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CATATATAAGCAAGATAAAA	NA	False	NA	NA	False	NA	NA	NA	104657572	104657392	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_104657400_104657600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031871	chr11	-	178	1	Intergenic	novelGene_1034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAATGGAAAAAATGT	NA	False	NA	NA	False	NA	NA	NA	104816960	104816782	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_104816800_104817000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031891	chr11	+	201	1	Intergenic	novelGene_1035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCTGTAACATTGAAGAT	NA	False	NA	NA	False	NA	NA	NA	105066119	105066320	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_105066100_105066300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031902	chr11	+	3670	22	FSM	ENSMUSG00000020694.18	ENSMUST00000106941.9	3699	22	29	0	29	0	multi-exon	FALSE	canonical	3	204	junction_5	59.3191529336175	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCCTGGATTCTCTGAT	NA	False	NA	26	True	AATAAA	-19	NA	105072381	105173003	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031934	chr11	+	229	1	Intergenic	novelGene_1036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTAAGCTAAAAACAAGAT	4116	False	NA	NA	False	NA	NA	NA	105788934	105789163	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_105788900_105789200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031951	chr11	-	2809	7	NIC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	64.1320252811859	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGCCTTCTGTCTTCAT	NA	False	NA	-4	True	AATAAA	-15	NA	105835027	105824527	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105830925_105831205_105834936
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031964	chr11	+	5748	7	FSM	ENSMUSG00000049354.9	ENSMUST00000058438.9	5750	7	2	0	2	0	multi-exon	FALSE	canonical	3	184	junction_6	15.5527775297176	184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTGTGATGAATTCA	4747	False	NA	15	True	AATAAA	-24	NA	105927699	105950150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_105928088_105937516_105937676_105938462_105938575_105938968_105939088_105942582_105942793_105944556_105944675_105945508
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031994	chr11	-	215	1	Intergenic	novelGene_1037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGAATATGCATGTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	106007150	106006935	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_106006900_106007200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000031996	chr11	+	236	1	Intergenic	novelGene_1038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAGAAGATGT	NA	False	NA	NA	False	NA	NA	NA	106031914	106032150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_106031900_106032200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032002	chr11	-	1535	5	FSM	ENSMUSG00000040699.14	ENSMUST00000045923.10	2950	5	-43	1458	-43	600	multi-exon	FALSE	canonical	3	236	junction_1	24.7638849940796	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTTCGGTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	106051011	106048539	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_106049660_106049760_106049901_106049987_106050033_106050173_106050269_106050876
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032035	chr11	-	3148	13	NNC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	-463	1425	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_12	175.732336713158	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGCTGCTTTGACTT	NA	False	NA	-4	True	ATTAAA	-14	NA	106107633	106090179	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106107536
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032052	chr11	+	3879	18	NNC	ENSMUSG00000020705.7	novel	445	2	NA	NA	-471	1	at_least_one_novel_splicesite	FALSE	canonical	2	54	junction_1	112.518818110864	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTATCTTTTTATTC	NA	False	NA	29	True	ATTAAA	-16	NA	106107280	106139966	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_+_106107379_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032072	chr11	-	3169	21	FSM	ENSMUSG00000020706.14	ENSMUST00000021048.7	3144	21	-21	-4	-21	4	multi-exon	FALSE	canonical	3	632	junction_7	76.5847732907789	502	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTCTGATAGTTTAATAA	NA	False	NA	-10	True	AATAAA	-17	NA	106146926	106139963	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032082	chr11	+	1354	11	FSM	ENSMUSG00000020708.13	ENSMUST00000021049.9	1316	11	-30	-8	-30	8	multi-exon	FALSE	canonical	3	2261	junction_6	178.766439803449	617	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGTTTGTTAATACGCG	4506	False	NA	23	True	AATAAA	-27	NA	106146949	106153954	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_106147041_106147673_106147746_106151678_106151749_106152010_106152109_106152248_106152537_106152731_106152859_106152943_106153135_106153229_106153329_106153406_106153518_106153622_106153710_106153834
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032107	chr11	+	189	1	Intergenic	novelGene_1039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATCTGATTCCTGGGTGG	1459	False	NA	NA	False	NA	NA	NA	106161765	106161954	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_106161800_106162000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032119	chr11	-	199	1	Intergenic	novelGene_1040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGACTCCAGGAAGATGAA	6480	False	NA	NA	False	NA	NA	NA	106381631	106381432	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_106381400_106381600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032129	chr11	+	105	2	Intergenic	novelGene_1041	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	320	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGCTGGTGTCTTGTGTGT	4511	False	NA	24	True	AATAAA	-14	NA	106391740	106392037	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_106391767_106391958
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032133	chr11	+	297	1	FSM	ENSMUSG00000065126.3	ENSMUST00000083192.3	70	1	-78	-149	-78	149	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGCTGGTGTCTTGTGTGT	4511	False	NA	24	True	AATAAA	-14	NA	106391740	106392037	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_106391700_106392000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032140	chr11	-	5031	12	FSM	ENSMUSG00000040548.17	ENSMUST00000042780.14	4934	12	-89	-8	-89	8	multi-exon	FALSE	canonical	3	112	junction_11	20.6061051692923	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAGCATGTTATTTTTTA	3242	False	NA	NA	False	AATAAA	-19	NA	106503845	106392964	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106503683
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032151	chr11	+	221	1	Intergenic	novelGene_1042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTTGAAATTCTAATAT	NA	False	NA	NA	False	NA	NA	NA	106456669	106456890	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_106456700_106456900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032152	chr11	+	193	1	Intergenic	novelGene_1043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGTAAAATCTCAAAGGAAC	8903	False	NA	NA	False	NA	NA	NA	106509819	106510012	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_106509800_106510000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032158	chr11	-	201	2	Intergenic	novelGene_1044	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGCAGTACACTGAACAT	NA	False	NA	NA	False	NA	NA	NA	106638819	106524953	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_106525135_106638799
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032177	chr11	-	3280	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9023	4	at_least_one_novel_splicesite	FALSE	canonical	3	249	junction_16	435.971934123918	43	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCATTCAAGTGTCATCT	401	False	NA	-5	True	AATAAA	-23	NA	106615243	106545038	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615196
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032187	chr11	-	3260	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9035	4	at_least_one_novel_splicesite	FALSE	canonical	3	387	junction_15	360.787927859136	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCATTCAAGTGTCATCT	389	False	NA	-5	True	AATAAA	-23	NA	106615255	106545038	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032207	chr11	-	3224	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9023	2	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	479.929050311953	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGCATTCAAGTGTCAT	401	False	NA	-7	True	AATAAA	-21	NA	106615243	106545040	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_106545989_106552827_106552851_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032212	chr11	-	3255	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9023	2	at_least_one_novel_splicesite	FALSE	canonical	3	249	junction_15	384.021504027516	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGCATTCAAGTGTCAT	401	False	NA	-7	True	AATAAA	-21	NA	106615243	106545040	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615196
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032237	chr11	-	3306	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9049	1	at_least_one_novel_splicesite	FALSE	canonical	3	388	junction_16	418.075950037789	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTGCATTCAAGTGTCA	375	False	NA	-8	True	AATAAA	-20	NA	106615269	106545041	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032252	chr11	-	3196	15	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	249	junction_14	395.431726091875	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615196
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032256	chr11	-	3248	15	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9044	0	at_least_one_novel_splicesite	FALSE	canonical	3	341	junction_14	378.799506766483	74	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	380	False	NA	-9	True	AATAAA	-19	NA	106615264	106545042	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032257	chr11	-	3216	15	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9033	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_14	438.04964307247	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	391	False	NA	-9	True	AATAAA	-19	NA	106615253	106545042	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106605990_106615168
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032258	chr11	-	3293	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9049	0	at_least_one_novel_splicesite	FALSE	canonical	3	387	junction_16	418.197765529361	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	375	False	NA	-9	True	AATAAA	-19	NA	106615269	106545042	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032260	chr11	-	3225	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_4	494.225031966434	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032261	chr11	-	3142	14	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_2	493.407245649242	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_106545989_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615196
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032263	chr11	-	3202	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_3	456.395913206765	37	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032268	chr11	-	3256	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	388	junction_15	360.626097533473	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032269	chr11	-	3145	14	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_2	473.471167808096	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_106545989_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032273	chr11	-	3241	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_15	413.292385068435	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615208
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032277	chr11	-	3183	14	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9033	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_2	479.98502195566	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	391	False	NA	-9	True	AATAAA	-19	NA	106615253	106545042	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_106545989_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032280	chr11	-	3222	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_4	509.466186861852	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615196
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032299	chr11	-	3199	15	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	388	junction_14	370.599266494863	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032316	chr11	-	3199	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_3	475.283288241479	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615196
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032327	chr11	-	3190	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_3	456.524559546787	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	401	False	NA	-9	True	AATAAA	-19	NA	106615243	106545042	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032393	chr11	+	190	1	Intergenic	novelGene_1045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGTTCAAAGTAATCCTCA	NA	False	NA	NA	False	NA	NA	NA	106547635	106547825	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_106547600_106547800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032402	chr11	+	191	1	Antisense	novelGene_ENSMUSG00000020718.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATACTTGACAGTACTCT	NA	False	NA	NA	False	NA	NA	NA	106662727	106662918	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr11_+_106662700_106662900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032416	chr11	-	3525	13	FSM	ENSMUSG00000020719.15	ENSMUST00000021062.12	3559	13	35	-1	-3	1	multi-exon	FALSE	canonical	3	3830	junction_8	158.443711526277	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCATTTATTTATTCG	9651	False	NA	-7	True	AATAAA	-19	NA	106679323	106671179	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032427	chr11	-	3696	14	NIC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_13	1103.10076146326	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTTCATTTATTTATTC	9240	False	NA	-8	True	AATAAA	-18	NA	106679734	106671180	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098_106679286_106679524
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032428	chr11	-	4787	12	FSM	ENSMUSG00000020719.15	ENSMUST00000133426.8	3593	12	-1	-1193	-1	0	multi-exon	FALSE	canonical	3	3830	junction_7	165.368159266449	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTTCATTTATTTATTC	9653	False	NA	-8	True	AATAAA	-18	NA	106679321	106671180	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_106673083_106673294_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032429	chr11	-	3296	12	NIC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	107	junction_1	1173.36496404272	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTTCATTTATTTATTC	9654	False	NA	-8	True	AATAAA	-18	NA	106679320	106671180	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_106673083_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032433	chr11	-	3660	14	NIC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	497	junction_13	995.534526816042	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTTCATTTATTTATTC	8959	False	NA	-8	True	AATAAA	-18	NA	106680015	106671180	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098_106679286_106679841
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032450	chr11	-	4998	11	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	3830	junction_6	142.502245596341	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTTCATTTATTTATTC	9654	False	NA	-8	True	AATAAA	-18	NA	106679320	106671180	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032465	chr11	-	2439	13	NNC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	1164.1479597638	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTGAAATTGTACTTTA	9654	False	NA	-7	True	AATAAA	-19	NA	106679320	106672371	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_106673083_106673294_106673629_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032474	chr11	-	3889	10	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	2	intron_retention	FALSE	canonical	3	3830	junction_5	150.168629493482	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTGAAATTGTACTTTA	9654	False	NA	-7	True	AATAAA	-19	NA	106679320	106672371	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032484	chr11	-	5192	2	FSM	ENSMUSG00000020719.15_ENSMUSG00002076984.1	ENSMUST00000151741.2	810	2	-2041	-2341	376	369	multi-exon	FALSE	canonical	3	4137	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTACCTTCTTGGGAATAC	NA	False	NA	NA	False	NA	NA	NA	106678917	106673627	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_106676123_106676220
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032489	chr11	-	4661	3	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	376	509	intron_retention	FALSE	canonical	3	3830	junction_2	153.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTACCTTCTTGGGAATA	NA	False	NA	NA	False	NA	NA	NA	106678917	106673628	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_106676123_106676220_106676363_106676892
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032504	chr11	+	202	2	Intergenic	novelGene_1047	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	764	junction_1	0	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACCCCGTCTTAAAAACA	8127	False	NA	NA	False	NA	NA	NA	106696798	106698399	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_106696851_106698249
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032506	chr11	+	223	1	Intergenic	novelGene_1046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	604	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGGATTCCATTGTAAAAA	8127	False	NA	NA	False	TTTAAA	-19	NA	106696798	106697021	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_106696800_106697000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032518	chr11	+	201	1	Intergenic	novelGene_1048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACCCCGTCTTAAAAACA	9527	False	NA	NA	False	NA	NA	NA	106698198	106698399	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_106698200_106698400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032527	chr11	-	171	1	Intergenic	novelGene_1049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATCAGGACCTCCGAAA	NA	False	NA	NA	False	NA	NA	NA	106701038	106700867	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_106700900_106701000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032536	chr11	-	216	1	Intergenic	novelGene_1050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTACATTTATATTTTGGA	9025	False	NA	NA	False	AATATA	-6	NA	106742087	106741871	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_106741900_106742100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032543	chr11	+	186	1	Intergenic	novelGene_1051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTATTAAAAAAAAAGGTAGT	NA	False	NA	NA	False	NA	NA	NA	106876478	106876664	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_106876500_106876700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032557	chr11	-	1969	11	FSM	ENSMUSG00000018362.15	ENSMUST00000018506.13	2054	11	77	8	-14	-8	multi-exon	FALSE	canonical	3	2002	junction_5	417.039386629129	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGACTTGCTGTTTTC	9743	False	NA	NA	False	AATAAA	-19	NA	106890290	106879462	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888162_106890184
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032565	chr11	+	241	1	Intergenic	novelGene_1052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAACTGGAACTGCCCTGG	NA	False	NA	NA	False	NA	NA	NA	106884575	106884816	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_106884600_106884800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032581	chr11	+	203	1	Intergenic	novelGene_1053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCACTTGGGAGGCAGAGG	NA	False	NA	NA	False	NA	NA	NA	106910777	106910980	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_106910800_106911000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032585	chr11	+	210	1	Intergenic	novelGene_1054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTATGGGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	106988433	106988643	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_106988400_106988600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032608	chr11	+	199	1	Intergenic	novelGene_1055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAACAAATATATCTTTAA	2579	False	NA	NA	False	NA	NA	NA	107025318	107025517	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_107025300_107025500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032614	chr11	+	210	1	Intergenic	novelGene_1056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGACCCTGAGGGGGCTG	6575	False	NA	NA	False	NA	NA	NA	107032636	107032846	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_107032600_107032800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032626	chr11	+	188	1	Intergenic	novelGene_1057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTTGGTGTGTAAGTCT	NA	False	NA	NA	False	NA	NA	NA	107046787	107046975	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_107046800_107047000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032645	chr11	-	2723	18	FSM	ENSMUSG00000018433.15	ENSMUST00000106757.8	3098	18	111	264	82	-264	multi-exon	FALSE	canonical	3	50	junction_5	109.451004980994	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTGCAAAACATCTCTG	1212	False	NA	NA	False	NA	NA	NA	107080096	107057752	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064228_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032655	chr11	-	2800	9	NIC	ENSMUSG00000040430.19	novel	6329	10	NA	NA	-21	-3542	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	20.8862245271854	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCGCTTCCCCTTTTTGT	NA	False	NA	-2	True	AATAAA	-20	NA	107361546	107102259	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_107103485_107107503_107107623_107117056_107117121_107125172_107125329_107142847_107142944_107187024_107187097_107212412_107212502_107228237_107228387_107360716
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032663	chr11	+	196	1	Intergenic	novelGene_1058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGTGATGACTCCAGTCTC	NA	False	NA	NA	False	NA	NA	NA	107180067	107180263	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_107180100_107180300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032669	chr11	-	224	1	Intergenic	novelGene_1059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTAGAAAATGCCCAAGCT	NA	False	NA	NA	False	NA	NA	NA	107197805	107197581	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_107197600_107197800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032676	chr11	-	210	1	Intergenic	novelGene_1060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATATACAAATACATTTTA	NA	False	NA	NA	False	NA	NA	NA	107271595	107271385	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_107271400_107271600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032682	chr11	+	327	1	Intergenic	novelGene_1061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTTATTGCTGGGTAG	NA	False	NA	NA	False	NA	NA	NA	107332202	107332529	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_107332200_107332500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032692	chr11	+	179	1	Intergenic	novelGene_1062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAGTGATTTTCCGCT	8990	False	NA	NA	False	NA	NA	NA	107347027	107347206	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_107347000_107347200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032699	chr11	+	191	1	Intergenic	novelGene_1063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTATCTGGACCTCCAC	3404	False	NA	NA	False	NA	NA	NA	107356544	107356735	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_107356500_107356700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032708	chr11	+	193	1	Intergenic	novelGene_1064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGATCACCAAGCCTG	NA	False	NA	NA	False	NA	NA	NA	107368876	107369069	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_107368900_107369100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032717	chr11	+	1908	11	FSM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	-3	-1	-3	1	multi-exon	FALSE	canonical	3	2673	junction_3	110.503800839609	1038	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGCGTGGAGTTTGCTT	NA	False	NA	NA	False	NA	NA	NA	107370306	107389000	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032732	chr11	+	204	1	Intergenic	novelGene_1065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	237	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGGCAGCCAATGTTCT	NA	False	NA	NA	False	NA	NA	NA	107377937	107378141	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_107377900_107378100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032744	chr11	+	190	1	Intergenic	novelGene_1066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAGAGTCACTCTCAGAA	NA	False	NA	NA	False	NA	NA	NA	107397889	107398079	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_107397900_107398100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032759	chr11	+	6242	32	NIC	ENSMUSG00000020721.17	novel	6218	32	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	32.985507491541	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	NA	False	NA	9	True	AATAAA	-17	NA	107438758	107577769	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_107438808_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032765	chr11	+	6298	33	FSM	ENSMUSG00000020721.17	ENSMUST00000106746.8	13147	33	-34	6883	4	0	multi-exon	FALSE	canonical	3	95	junction_1	34.694973856994	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	NA	False	NA	9	True	AATAAA	-17	NA	107438759	107577769	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_107438808_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032772	chr11	+	6284	33	NIC	ENSMUSG00000020721.17	novel	13147	33	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_16	39.9053567832691	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	NA	False	NA	9	True	AATAAA	-17	NA	107438776	107577769	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_107438808_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032774	chr11	+	6227	32	FSM	ENSMUSG00000020721.17	ENSMUST00000075012.8	6218	32	-9	0	-5	0	multi-exon	FALSE	canonical	3	55	junction_15	38.7019615966116	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	NA	False	NA	9	True	AATAAA	-17	NA	107438776	107577769	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_107438808_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032785	chr11	-	177	1	Intergenic	novelGene_1067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAATTATCTTAAAAA	6754	False	NA	NA	False	NA	NA	NA	107455310	107455133	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_107455100_107455300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032789	chr11	-	225	1	Intergenic	novelGene_1068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACATGAGATAGGCAAAGT	NA	False	NA	NA	False	ATTAAA	-19	NA	107470865	107470640	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_107470600_107470900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032793	chr11	-	186	1	Intergenic	novelGene_1069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACAACACTCAAATGCAT	9060	False	NA	NA	False	NA	NA	NA	107565462	107565276	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_107565300_107565500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032806	chr11	+	186	1	Intergenic	novelGene_1070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAGAGAGAGGTGTT	NA	False	NA	NA	False	NA	NA	NA	108779378	108779564	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_108779400_108779600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032810	chr11	+	4260	11	FSM	ENSMUSG00000000142.16	ENSMUST00000052915.14	4260	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	12.1720992437624	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCCTCATCTTTGGAT	NA	False	NA	7	True	ATTAAA	-19	NA	108811174	108841609	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_108811388_108813977_108814929_108822264_108822406_108830137_108830241_108832728_108832870_108833016_108833523_108833760_108833956_108834481_108834713_108835335_108835432_108836705_108836874_108840094
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032817	chr11	+	4407	11	NIC	ENSMUSG00000000142.16	novel	2551	9	NA	NA	34	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_4	5.20096144957834	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCCTCATCTTTGGAT	NA	False	NA	7	True	ATTAAA	-19	NA	108811659	108841609	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_108812020_108813977_108814929_108822264_108822406_108830137_108830241_108832728_108832870_108833016_108833523_108833760_108833956_108834481_108834713_108835335_108835432_108836705_108836874_108840094
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032825	chr11	+	6197	4	FSM	ENSMUSG00000020611.15	ENSMUST00000020930.14	6160	4	-37	0	-37	0	multi-exon	TRUE	canonical	3	267	junction_2	46.1976430375211	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGTAGCACGACGTTATT	NA	False	NA	12	True	AATAAA	-14	NA	109253619	109292195	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_109254083_109256361_109256589_109283171_109283223_109286739
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032858	chr11	-	2043	13	FSM	ENSMUSG00000041895.16	ENSMUST00000103060.10	2050	13	7	0	7	0	multi-exon	FALSE	canonical	1	33	junction_5	23.2491039253846	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGAGTTGTTTACATTT	NA	False	NA	-6	True	AATAAA	-15	NA	109502251	109464156	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_109464794_109467882_109467984_109468400_109468520_109469116_109469225_109470452_109470618_109473197_109473306_109473952_109474024_109474900_109474994_109475920_109476019_109487928_109488026_109494498_109494669_109496710_109496794_109502058
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032869	chr11	+	3366	11	FSM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	0	-7	0	7	multi-exon	TRUE	canonical	3	1417	junction_9	119.858458191318	695	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTTTTTCTTCCTTTCTT	NA	False	NA	27	True	AATAAA	-32	NA	109541746	109560489	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_109541900_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032881	chr11	+	2068	12	FSM	ENSMUSG00000020623.12	ENSMUST00000020949.12	2068	12	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_7	8.31308835611224	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGCATAGTATTAGTG	NA	False	NA	14	True	AGTAAA	-24	NA	110289947	110404467	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_110290252_110373364_110373432_110380970_110381020_110381587_110381702_110383338_110383459_110383721_110383839_110385120_110385173_110387164_110387293_110388722_110388801_110390208_110390349_110397531_110397578_110403614
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032912	chr11	-	2722	10	FSM	ENSMUSG00000041654.16	ENSMUST00000106633.10	2688	10	-35	1	-15	-1	multi-exon	FALSE	canonical	0	0	junction_5	154.822558728882	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7731	False	NA	-3	True	AATAAA	-18	NA	113456620	113135679	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456501
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032921	chr11	-	2705	10	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	167.525785743237	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7745	False	NA	-3	True	AATAAA	-18	NA	113456606	113135679	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113456501
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032935	chr11	+	186	1	Intergenic	novelGene_1071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGTGGTCTCCACACTC	NA	False	NA	NA	False	NA	NA	NA	113478211	113478397	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_113478200_113478400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032942	chr11	+	3033	14	FSM	ENSMUSG00000018661.18	ENSMUST00000018805.15	3935	14	356	546	197	1	multi-exon	FALSE	canonical	3	202	junction_2	35.2900073021332	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTCTGCTCCTGTT	NA	False	NA	15	True	AATAAA	-23	NA	113540350	113553227	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_113540702_113542670_113542913_113543050_113543233_113543367_113543539_113544729_113544887_113545793_113546005_113546685_113547475_113547828_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551768_113551879_113551965_113552045_113553032
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000032972	chr11	+	2074	5	FSM	ENSMUSG00000041623.18	ENSMUST00000106621.4	2062	5	-12	0	-5	0	multi-exon	TRUE	canonical	3	249	junction_1	30.335622624235	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTCTTCTTTTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	113575260	113585473	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_113575538_113578599_113580048_113582554_113582660_113583220_113583329_113585337
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033004	chr11	-	2948	2	FSM	ENSMUSG00000041598.8	ENSMUST00000053536.5	3008	2	60	0	60	0	multi-exon	FALSE	canonical	3	115	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTCTGACTCTTC	7423	False	NA	-2	True	ATTAAA	-15	NA	113642647	113617677	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_113620492_113642513
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033010	chr11	+	195	1	Intergenic	novelGene_1072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAGACACAGAACTGTCA	NA	False	NA	NA	False	NA	NA	NA	113662796	113662991	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_113662800_113663000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033021	chr11	+	216	1	Intergenic	novelGene_1073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAGATAACCTGACACTT	NA	False	NA	NA	False	NA	NA	NA	114456700	114456916	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_114456700_114456900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033028	chr11	+	363	5	FSM	ENSMUSG00000057322.13	ENSMUST00000106602.10	371	5	9	-1	9	1	multi-exon	FALSE	canonical	3	6598	junction_1	5536.08152825625	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTCCTCAGTCTCT	NA	False	NA	29	True	ATTAAA	-16	NA	114559358	114563158	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_114559436_114559606_114559641_114559731_114559793_114562559_114562683_114563090
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033047	chr11	+	353	5	FSM	ENSMUSG00000057322.13	ENSMUST00000082092.5	345	5	-7	-1	-7	1	multi-exon	FALSE	canonical	3	1304	junction_1	7543.63564122102	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTCCTCAGTCTCT	NA	False	NA	29	True	ATTAAA	-16	NA	114559444	114563158	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_114559512_114559606_114559641_114559731_114559793_114562559_114562683_114563090
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033060	chr11	+	3460	14	FSM	ENSMUSG00000034714.10	ENSMUST00000045779.6	3486	14	32	-6	32	6	multi-exon	TRUE	canonical	3	173	junction_11	15.0937896237857	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGAGTCACTTAACTTG	NA	False	NA	17	True	AATAAA	-20	NA	114566288	114611809	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_114566499_114577219_114577393_114581064_114581177_114587414_114587636_114592606_114592703_114593061_114593135_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636_114601823_114602585_114602665_114609954
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033069	chr11	+	192	1	Intergenic	novelGene_1074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTGCAGCCTAGAAGGA	NA	False	NA	NA	False	NA	NA	NA	114658586	114658778	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_114658600_114658800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033078	chr11	+	1927	6	FSM	ENSMUSG00000020733.4	ENSMUST00000021077.4	1925	6	0	-2	0	2	multi-exon	FALSE	canonical	3	130	junction_1	12.6964561984831	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGTGTCCTCCTTTGT	NA	False	NA	12	True	NA	NA	NA	115054166	115072009	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_115054778_115067176_115067339_115068049_115068204_115069875_115069917_115070832_115070923_115071140
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033095	chr11	+	3166	11	NNC	ENSMUSG00000045980.14	novel	4564	10	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	14.0032139168121	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTCTTGCTTAAGGACAA	NA	False	NA	NA	False	ATTAAA	-20	NA	115078336	115136597	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_+_115078425_115079035_115079149_115088061_115088184_115091645_115091728_115092141_115092239_115092957_115093039_115095887_115095988_115096300_115096410_115119246_115119341_115134195_115135637_115135758
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033100	chr11	+	3274	10	FSM	ENSMUSG00000045980.14	ENSMUST00000061450.7	4564	10	33	1257	9	2	multi-exon	FALSE	canonical	3	30	junction_1	6.92463842261461	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTCCCTCTTGCTTAAG	NA	False	NA	NA	False	ATTAAA	-15	NA	115078345	115136592	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_115078425_115079035_115079149_115088061_115088184_115091645_115091728_115092141_115092239_115092957_115093039_115095887_115095988_115096300_115096410_115119246_115119341_115134195
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033104	chr11	-	1879	12	FSM	ENSMUSG00000018861.9	ENSMUST00000021078.3	1948	12	69	0	-67	0	multi-exon	FALSE	canonical	3	83	junction_7	15.1766458254911	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGGCTGATAGCTACCA	NA	False	NA	0	True	AATAAA	-17	NA	115167807	115158849	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_115159281_115159403_115159575_115160270_115160443_115160522_115160723_115160840_115160926_115161148_115161257_115162087_115162190_115162482_115162597_115162702_115162826_115163012_115163109_115166904_115167009_115167634
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033128	chr11	+	187	1	Intergenic	novelGene_1075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCTCATTGTGGGAGCT	480	False	NA	4	True	NA	NA	NA	115277905	115278092	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_115277900_115278100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033137	chr11	+	849	6	FSM	ENSMUSG00000018858.16	ENSMUST00000153983.8	2596	6	-8	1755	-8	0	multi-exon	FALSE	canonical	3	944	junction_3	61.9825781974258	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTCCAGTGAGAGCT	NA	False	NA	16	True	AATAAA	-16	NA	115294569	115301745	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_115294787_115297376_115297414_115300305_115300366_115300885_115300969_115301057_115301228_115301463
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033140	chr11	+	761	6	FSM	ENSMUSG00000018858.16	ENSMUST00000103036.5	749	6	-12	0	-7	0	multi-exon	FALSE	canonical	3	165	junction_1	353.082766501	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTCCAGTGAGAGCT	NA	False	NA	16	True	AATAAA	-16	NA	115294570	115301745	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_115294700_115297376_115297414_115300305_115300366_115300885_115300969_115301057_115301228_115301463
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033149	chr11	+	781	5	FSM	ENSMUSG00000018858.16	ENSMUST00000106539.10	2522	5	-2	1743	0	0	multi-exon	FALSE	canonical	3	79	junction_2	428.298377302553	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTCCAGTGAGAGCT	NA	False	NA	16	True	AATAAA	-16	NA	115294577	115301745	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_115294787_115297376_115297414_115300885_115300969_115301057_115301228_115301463
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033161	chr11	-	612	6	FSM	ENSMUSG00000034566.11	ENSMUST00000043931.9	625	6	13	0	13	0	multi-exon	FALSE	canonical	3	1974	junction_5	551.930285452792	468	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTCTCTGAGTAGATAAAT	NA	False	NA	-3	True	AATAAA	-22	NA	115310775	115306514	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211_115309343_115310717
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033185	chr11	+	2263	3	FSM	ENSMUSG00000057219.12	ENSMUST00000035240.7	2260	3	0	-3	0	3	multi-exon	FALSE	canonical	3	16	junction_2	2.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGCTAGTCTCCTTC	NA	False	NA	NA	False	ATTAAA	-25	NA	115366492	115381296	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_115366854_115366947_115367092_115379538
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033193	chr11	-	858	5	FSM	ENSMUSG00000020736.13	ENSMUST00000021082.7	858	5	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_4	11.1214882097676	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGGATCTTTGATGCT	NA	False	NA	-8	True	AATAAA	-19	NA	115382688	115381245	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_115381571_115381678_115381794_115381963_115382025_115382096_115382198_115382432
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033209	chr11	-	1379	5	FSM	ENSMUSG00000020737.13	ENSMUST00000021083.7	1375	5	0	-4	0	4	multi-exon	FALSE	canonical	3	1461	junction_2	125.475844288851	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTTTTGTCTTTCTCTTT	NA	False	NA	NA	False	AGTAAA	-23	NA	115405213	115388174	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_115389126_115391491_115391511_115392830_115392929_115393857_115394001_115405045
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033212	chr11	-	3745	4	FSM	ENSMUSG00000020737.13	ENSMUST00000155399.2	696	4	-16	-3033	0	4	multi-exon	FALSE	canonical	3	1461	junction_1	143.613679323694	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTTTTGTCTTTCTCTTT	NA	False	NA	NA	False	AGTAAA	-23	NA	115405213	115388174	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_115391511_115392830_115392929_115393857_115394001_115405045
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033225	chr11	+	200	1	Intergenic	novelGene_1076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTGTCTCAGAAAAATAAA	670	False	NA	NA	False	NA	NA	NA	115395309	115395509	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_115395300_115395500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033236	chr11	+	194	1	Intergenic	novelGene_1077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCCCAGCTCCCTCAGG	5742	False	NA	NA	False	NA	NA	NA	115400381	115400575	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_115400400_115400600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033244	chr11	-	1060	4	FSM	ENSMUSG00000020738.17	ENSMUST00000153892.2	1051	4	-8	-1	-8	1	multi-exon	FALSE	canonical	3	3819	junction_1	149.312498546579	757	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCTCTTTATTCTGAAG	NA	False	NA	-50	True	AATAAA	-19	NA	115427110	115413926	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_115414596_115421171_115421244_115425377_115425510_115426923
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033260	chr11	+	218	1	Intergenic	novelGene_1078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGCCGGGTTTAGTGGCG	9954	False	NA	NA	False	NA	NA	NA	115430105	115430323	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_115430100_115430300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033265	chr11	+	152	1	Intergenic	novelGene_1079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTGTTTCTAGGAATGC	NA	False	NA	NA	False	NA	NA	NA	115439348	115439500	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_115439300_115439500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033270	chr11	-	289	1	Intergenic	novelGene_1080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCTGGTCCTTTCTACT	NA	False	NA	NA	False	NA	NA	NA	115446123	115445834	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_115445800_115446100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033275	chr11	+	2165	19	FSM	ENSMUSG00000020739.12	ENSMUST00000021085.11	2230	19	4	61	4	18	multi-exon	TRUE	canonical	3	862	junction_16	81.0315439264927	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGGAGGTTTTAAAATTG	NA	False	NA	30	True	AATAAA	-36	NA	115455263	115474750	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033297	chr11	+	2085	19	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_16	299.37137842857	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAATTGTTAATCCTACC	NA	False	NA	12	True	AATAAA	-18	NA	115455301	115474732	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473910_115474039_115474151_115474254_115474546
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033312	chr11	-	3686	17	FSM	ENSMUSG00000020740.14	ENSMUST00000019135.14	3816	17	132	-2	-26	2	multi-exon	TRUE	canonical	3	352	junction_6	42.6075385788712	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCATCTTTCAATACAGAG	3513	False	NA	0	True	AATAAA	-17	NA	115494745	115475078	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033320	chr11	-	3592	17	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	93	junction_13	83.8961178705546	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCATCTTTCAATACAGA	3547	False	NA	-1	True	AATAAA	-16	NA	115494711	115475079	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033354	chr11	-	1310	6	NNC	ENSMUSG00000020743.16	novel	1372	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_5	134.525239267581	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGTATTTCCATAGCATC	NA	False	NA	0	True	AATAAA	-18	NA	115503751	115498743	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_115499440_115499886_115499980_115500105_115500262_115500364_115500475_115502728_115502861_115503628
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033355	chr11	-	1357	6	FSM	ENSMUSG00000020743.16	ENSMUST00000021087.14	1372	6	15	0	15	0	multi-exon	FALSE	canonical	3	302	junction_2	38.1030182531515	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGTATTTCCATAGCATC	NA	False	NA	0	True	AATAAA	-18	NA	115503780	115498743	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_115499440_115499886_115499980_115500105_115500262_115500364_115500475_115502728_115502861_115503610
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033367	chr11	-	1454	5	NIC	ENSMUSG00000020743.16	novel	1372	6	NA	NA	2	0	intron_retention	FALSE	canonical	3	324	junction_4	32.8129166640212	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGTATTTCCATAGCATC	NA	False	NA	0	True	AATAAA	-18	NA	115503751	115498743	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_115499440_115499886_115500262_115500364_115500475_115502728_115502861_115503610
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033400	chr11	-	2738	6	FSM	ENSMUSG00000059923.14	ENSMUST00000021090.14	2709	6	-28	-1	-28	1	multi-exon	FALSE	canonical	3	859	junction_5	53.4714877294432	247	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTCATTTCTCCC	4442	False	NA	0	True	AATAAA	-20	NA	115599451	115534869	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_115536781_115537535_115537705_115540596_115540720_115546183_115546282_115589977_115590183_115599219
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033410	chr11	+	204	1	Intergenic	novelGene_1081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTACATATGTGATGGG	NA	False	NA	NA	False	NA	NA	NA	115592509	115592713	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_115592500_115592700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033416	chr11	+	190	1	Intergenic	novelGene_1082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTACTGGCTGGTGTGGTGG	7379	False	NA	NA	False	NA	NA	NA	115620871	115621061	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_115620900_115621100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033426	chr11	+	4921	32	NIC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	36	junction_13	20.1870029585754	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGGTGGATCCATGAA	NA	False	NA	15	True	ATTAAA	-23	NA	115656267	115689859	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681858_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033446	chr11	+	188	2	Intergenic	novelGene_1083	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATTCTCATGGCAACCC	NA	False	NA	NA	False	NA	NA	NA	115694958	115754973	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_115695106_115754932
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033451	chr11	+	1974	11	FSM	ENSMUSG00000020781.15	ENSMUST00000021134.10	1979	11	0	5	0	0	multi-exon	FALSE	canonical	3	156	junction_1	26.8730348118704	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGTTCAATACTTAC	5932	False	NA	NA	False	ATTAAA	-16	NA	115705549	115713915	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_115705646_115705740_115705906_115706000_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824_115712942_115713408
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033467	chr11	+	3573	26	FSM	ENSMUSG00000020782.19	ENSMUST00000103032.11	3551	26	-22	0	-22	0	multi-exon	TRUE	canonical	3	630	junction_7	88.2626444199357	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGAGGACCCGTGCTT	6778	False	NA	40	True	AATAAA	-25	NA	115714852	115746606	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033485	chr11	+	3792	27	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-6	-20	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	202.96016457021	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTTTCGTCTTCACTTT	6794	False	NA	18	True	AATAAA	-3	NA	115714868	115746584	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_115715004_115723487_115723745_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033494	chr11	+	3530	26	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-6	-22	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_25	162.280576779848	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	6794	False	NA	16	True	AATAAA	-1	NA	115714868	115746582	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746294
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033537	chr11	+	188	1	Intergenic	novelGene_1084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGCACACATACAC	NA	False	NA	NA	False	NA	NA	NA	115813579	115813767	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_115813600_115813800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033565	chr11	+	198	1	Intergenic	novelGene_1085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGTGTGATCTTCTAAAA	4398	False	NA	NA	False	NA	NA	NA	115904555	115904753	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_115904600_115904800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033573	chr11	-	1982	4	FSM	ENSMUSG00000016559.15	ENSMUST00000016703.8	1993	4	0	11	0	-11	multi-exon	FALSE	canonical	3	12160	junction_3	927.451466235416	4252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACAGTTTCTCTGTAGC	NA	False	NA	-2	True	AATAAA	-28	NA	115915330	115912797	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_115914362_115914450_115914605_115914707_115914846_115915204
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033591	chr11	-	2022	3	FSM	ENSMUSG00000016559.15	ENSMUST00000139378.2	773	3	-31	-1218	0	-330	multi-exon	FALSE	canonical	3	13934	junction_1	171	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGTGTCAAACCTAAATT	NA	False	NA	-15	True	AATAAA	-14	NA	115915330	115913116	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_115914362_115914450_115914605_115914707
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033607	chr11	+	204	1	Intergenic	novelGene_1086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAACCAAAGAAGTAGTAAT	4336	False	NA	NA	False	NA	NA	NA	115916661	115916865	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_115916700_115916900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033614	chr11	+	3731	16	FSM	ENSMUSG00000020770.14	ENSMUST00000021116.12	3735	16	4	0	3	0	multi-exon	FALSE	canonical	3	78	junction_13	17.1308688240459	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8826	False	NA	19	True	AATAAA	-13	NA	115921151	115952040	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943985_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033640	chr11	-	1830	8	FSM	ENSMUSG00000034341.18	ENSMUST00000074628.13	1826	8	0	-4	0	4	multi-exon	FALSE	canonical	3	961	junction_1	94.6975852546475	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTCTTGTGTGGTGA	NA	False	NA	-7	True	AGTAAA	-20	NA	115977821	115969394	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_115970423_115970533_115970611_115971047_115971171_115971371_115971507_115972057_115972151_115973101_115973238_115974664_115974774_115977692
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033644	chr11	-	716	1	Genic_Genomic	ENSMUSG00000034341.18	novel	NA	NA	NA	NA	2199	2	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGACTCTTGTGTGGT	NA	False	NA	-9	True	AGTAAA	-18	NA	115970112	115969396	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr11_-_115969400_115970100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033666	chr11	-	1473	4	FSM	ENSMUSG00000020773.12	ENSMUST00000141531.8	1503	4	30	0	30	0	multi-exon	FALSE	canonical	3	121	junction_3	17.6131264181639	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCCCCCTTTCATTCCT	NA	False	NA	NA	False	NA	NA	NA	115998915	115996577	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_115997468_115997757_115997830_115998249_115998449_115998603
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033681	chr11	-	1419	9	FSM	ENSMUSG00000020775.14	ENSMUST00000106439.2	1411	9	-6	-2	-6	2	multi-exon	FALSE	canonical	3	763	junction_8	33.509093914936	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTTCACTTTCGGGCA	401	False	NA	0	True	AATAAA	-22	NA	116029700	116022640	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116025332_116025733_116025943_116026016_116026152_116029267_116029448_116029536
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033704	chr11	-	3721	14	FSM	ENSMUSG00000020777.17	ENSMUST00000066587.12	3987	14	266	0	22	0	multi-exon	TRUE	canonical	3	53	junction_12	15.262593015675	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTGTTACGTGTAGA	NA	False	NA	1	True	AATAAA	-15	NA	116089605	116062713	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116074289_116074451_116089047_116089208_116089421
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033713	chr11	+	890	4	FSM	ENSMUSG00000020778.13	ENSMUST00000021130.7	902	4	12	0	12	0	multi-exon	FALSE	canonical	3	95	junction_3	16.0277537068951	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTGTGCTGATGCGG	9079	False	NA	7	True	AATAAA	-14	NA	116089692	116106144	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_116089810_116095670_116095806_116096436_116096595_116105664
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033721	chr11	-	2452	16	FSM	ENSMUSG00000020780.16	ENSMUST00000021133.16	2526	16	76	-2	-6	2	multi-exon	FALSE	canonical	3	572	junction_9	48.1105209099031	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTGGTTTTTGCATG	9893	False	NA	0	True	ATTAAA	-19	NA	116164967	116135989	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_116136757_116137045_116137099_116137470_116137547_116138641_116138772_116139556_116139652_116141561_116141719_116143554_116143620_116145127_116145227_116151619_116151761_116152570_116152654_116153685_116153796_116154040_116154124_116156182_116156379_116159099_116159214_116162738_116162806_116164751
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033731	chr11	-	2428	16	NNC	ENSMUSG00000020780.16	novel	2526	16	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_7	164.841931019453	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGTCTGGTTTTTGCA	9912	False	NA	-2	True	ATTAAA	-17	NA	116164948	116135991	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_116136757_116137045_116137099_116137470_116137547_116138641_116138772_116139556_116139652_116141561_116141719_116143554_116143617_116145127_116145227_116151619_116151761_116152570_116152654_116153685_116153796_116154040_116154124_116156182_116156379_116159099_116159214_116162738_116162806_116164751
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033740	chr11	+	192	1	Intergenic	novelGene_1087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGCAGAGGCAAATGGAT	NA	False	NA	NA	False	NA	NA	NA	116167233	116167425	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_116167200_116167400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033749	chr11	+	210	1	Intergenic	novelGene_1088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGGACCCAGGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	116169033	116169243	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_116169000_116169200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033775	chr11	-	184	1	Intergenic	novelGene_1089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCAACCAAGAGGCTAAGG	4158	False	NA	NA	False	NA	NA	NA	116243049	116242865	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_116242900_116243000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033783	chr11	+	201	1	Intergenic	novelGene_1090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTGATCAATAATGGGTC	NA	False	NA	NA	False	NA	NA	NA	116265563	116265764	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_116265600_116265800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033786	chr11	+	186	1	Intergenic	novelGene_1091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCCTTAACACCAAGGGG	8551	False	NA	NA	False	NA	NA	NA	116317388	116317574	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_116317400_116317600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033793	chr11	+	1529	3	FSM	ENSMUSG00000050628.7	ENSMUST00000057676.7	1482	3	-47	0	-47	0	multi-exon	TRUE	canonical	3	1535	junction_2	51	399	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTGTTTTTGTTTTTGC	NA	False	NA	36	True	TTTAAA	-29	NA	116324872	116329903	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_116325255_116325384_116325448_116328819
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033804	chr11	-	1860	10	FSM	ENSMUSG00000015869.17	ENSMUST00000106391.8	1841	10	-19	0	-19	0	multi-exon	FALSE	canonical	3	803	junction_5	49.0028973696177	477	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGCTGCTGAGCTCCCAG	NA	False	NA	-7	True	AATAAA	-27	NA	116381193	116361670	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116368942_116369350_116369467_116370477_116370651_116376694_116376762_116378943_116378997_116380873
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033838	chr11	-	3683	19	FSM	ENSMUSG00000020806.16	ENSMUST00000103029.10	3593	19	-90	0	-43	0	multi-exon	FALSE	canonical	2	65	junction_12	15.7409586041568	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTTTTGCCTTAGAC	NA	False	NA	-15	True	ATTAAA	-19	NA	116515116	116488990	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_116490265_116490886_116491041_116491223_116491325_116491435_116491512_116491720_116491816_116491911_116491976_116492110_116492218_116492419_116492582_116492714_116492790_116493014_116493127_116494478_116494680_116494757_116494877_116495203_116495333_116495786_116495991_116496068_116496265_116496933_116497059_116498053_116498254_116501129_116501306_116515003
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033848	chr11	+	221	1	Intergenic	novelGene_1092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	255	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTATTATATATATATAT	NA	False	NA	NA	False	AATAAA	-16	NA	116527591	116527812	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_116527600_116527800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033857	chr11	+	865	6	FSM	ENSMUSG00000020812.19	ENSMUST00000139934.8	865	6	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_5	27.7632851082144	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTAGCATTGTGGGTAT	NA	False	NA	3	True	AATAAA	-16	NA	116562485	116566624	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_116562583_116562989_116563182_116563489_116563565_116564763_116564898_116565125_116565202_116566333
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033860	chr11	+	1991	5	FSM	ENSMUSG00000020812.19	ENSMUST00000106378.8	1988	5	-3	0	-3	0	multi-exon	FALSE	canonical	3	135	junction_1	18.9340962287615	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTAGCATTGTGGGTAT	NA	False	NA	3	True	AATAAA	-16	NA	116562491	116566624	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_116562583_116562989_116563182_116563489_116563565_116564763_116564898_116565125
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033876	chr11	-	211	1	Intergenic	novelGene_1093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTCATTTTCATGTGTA	4236	False	NA	NA	False	AAAACA	-7	NA	116690999	116690788	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_116690800_116691000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033889	chr11	-	1726	6	FSM	ENSMUSG00000056962.12	ENSMUST00000047616.10	1668	6	-58	0	-58	0	multi-exon	FALSE	canonical	3	250	junction_2	32.356761271796	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	-7	True	AATAAA	-16	NA	116734333	116728257	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_116728590_116729815_116729955_116731235_116731372_116731894_116732182_116733157_116733547_116733890
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033912	chr11	-	1899	3	FSM	ENSMUSG00000034120.19	ENSMUST00000092404.13	1899	3	0	0	0	0	multi-exon	FALSE	canonical	3	1775	junction_2	41.5	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCCTGGTCTTTTGTTT	6003	False	NA	-5	True	ATTAAA	-31	NA	116743920	116740726	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_116741788_116742846_116743158_116743393
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033917	chr11	-	2958	2	NIC	ENSMUSG00000034120.19	novel	1899	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	1775	junction_1	0	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCCTGGTCTTTTGTTT	6003	False	NA	-5	True	ATTAAA	-31	NA	116743920	116740726	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_116743158_116743393
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033920	chr11	-	1394	4	NIC	ENSMUSG00000034120.19	novel	1336	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	235	junction_1	746.295890083521	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTGTCCTGGTCTTTTG	6003	False	NA	-8	True	ATTAAA	-28	NA	116743920	116740729	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_116741180_116741681_116741788_116742846_116743158_116743393
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033957	chr11	+	2339	14	NIC	ENSMUSG00000020818.17	novel	2952	14	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	3	62	junction_1	8.80424857096892	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGAGTATTTACTGGGA	NA	False	NA	5	True	AATAAA	-16	NA	116744585	116765538	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_116744730_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033959	chr11	+	2435	13	FSM	ENSMUSG00000020818.17	ENSMUST00000021173.14	3298	13	-60	923	-2	0	multi-exon	FALSE	canonical	3	74	junction_12	6.07076326887045	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGAGTATTTACTGGGA	NA	False	NA	5	True	AATAAA	-16	NA	116744585	116765538	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033973	chr11	+	206	1	Intergenic	novelGene_1094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAATTCGATTTATTTGT	NA	False	NA	NA	False	NA	NA	NA	116773898	116774104	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_116773900_116774100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033979	chr11	+	236	1	Intergenic	novelGene_1095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGCACTCGGGAGGCAG	NA	False	NA	NA	False	AAGAAA	-38	NA	116800588	116800824	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_116800600_116800800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000033993	chr11	-	176	1	Intergenic	novelGene_1096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAATCAACCCCCAAAT	NA	False	NA	NA	False	NA	NA	NA	116936307	116936131	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_116936100_116936300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034002	chr11	-	186	1	Intergenic	novelGene_1097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGGAGACCTTTATGTAG	NA	False	NA	NA	False	NA	NA	NA	116945095	116944909	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_116944900_116945100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034009	chr11	+	595	2	FSM	ENSMUSG00000086859.5	ENSMUST00000149822.3	600	2	5	0	0	0	multi-exon	FALSE	canonical	3	615	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCATTGTTCAAT	880	False	NA	20	True	AATAAA	-16	NA	116967613	116969781	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_116968029_116969601
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034052	chr11	+	2918	10	NIC	ENSMUSG00000059248.14	novel	647	4	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	178.114819397177	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	NA	False	NA	91	True	AATAAA	-16	NA	117198974	117253139	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_117199098_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034067	chr11	+	2945	10	FSM	ENSMUSG00000059248.14	ENSMUST00000100193.8	2924	10	-16	-5	-16	0	multi-exon	FALSE	canonical	3	18	junction_1	196.831569283656	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	NA	False	NA	91	True	AATAAA	-16	NA	117222529	117253139	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_117222680_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034083	chr11	+	192	1	Intergenic	novelGene_1098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATTACCTTACTGGCAA	NA	False	NA	NA	False	NA	NA	NA	117424658	117424850	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_117424700_117424800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034088	chr11	-	172	1	Intergenic	novelGene_1099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGGAAAAAATTAATAAAGAT	NA	False	NA	NA	False	NA	NA	NA	117473605	117473433	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_117473400_117473600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034093	chr11	+	197	1	Intergenic	novelGene_1100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGGACACTCTTACCAGG	NA	False	NA	NA	False	NA	NA	NA	117514422	117514619	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_117514400_117514600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034102	chr11	-	165	1	Intergenic	novelGene_1101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAATTCAGCATCAAAAT	NA	False	NA	-4	True	NA	NA	NA	117541385	117541220	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_117541200_117541400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034108	chr11	+	4198	5	ISM	ENSMUSG00000025571.14	ENSMUST00000106344.8	8847	22	-6	39266	-6	-25128	5prime_fragment	FALSE	canonical	3	93	junction_3	5.40832691319598	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTTTTCTTTAATTG	NA	False	NA	NA	False	GATAAA	-16	NA	117545632	117614999	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034113	chr11	+	7439	22	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	0	-209	combination_of_known_junctions	FALSE	canonical	3	68	junction_10	16.4620087603641	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTTGAACTGTGGCCA	NA	False	NA	NA	False	TATAAA	-19	NA	117545638	117652881	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034132	chr11	-	2919	20	FSM	ENSMUSG00000025572.19	ENSMUST00000026659.10	2865	20	-51	-3	-32	3	multi-exon	FALSE	canonical	3	224	junction_9	41.6618095045227	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCTTCAGGATGAGC	NA	False	NA	-1	True	ATTAAA	-18	NA	117671516	117656810	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034135	chr11	-	2906	20	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-31	3	at_least_one_novel_splicesite	TRUE	canonical	3	72	junction_9	62.8793418727409	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCTTCAGGATGAGC	NA	False	NA	-1	True	ATTAAA	-18	NA	117671515	117656810	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664200_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034149	chr11	+	1547	4	FSM	ENSMUSG00000048277.16	ENSMUST00000026649.14	1520	4	-25	-2	-25	2	multi-exon	FALSE	canonical	3	588	junction_1	45.536310297998	359	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGCTGGGTGGCGCCT	NA	False	NA	16	True	AATAAA	-16	NA	117700468	117705111	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_117700630_117703284_117703523_117703871_117704012_117704103
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034164	chr11	-	1195	6	NIC	ENSMUSG00000025574.14	novel	1440	7	NA	NA	5	17	combination_of_known_junctions	FALSE	canonical	3	149	junction_5	366.911215418662	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGGTTTCCCTAACTTG	NA	False	NA	0	True	ATTAAA	-33	NA	117716688	117706334	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_117706966_117707272_117707393_117707927_117708018_117712922_117713017_117715496_117715608_117716539
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034165	chr11	-	1248	7	FSM	ENSMUSG00000025574.14	ENSMUST00000026661.4	1440	7	209	-17	-16	17	multi-exon	FALSE	canonical	3	796	junction_5	107.729084074615	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGGTTTCCCTAACTTG	NA	False	NA	0	True	ATTAAA	-33	NA	117716709	117706334	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_117706966_117707272_117707393_117707927_117708018_117712922_117713017_117715496_117715608_117716426_117716459_117716539
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034166	chr11	-	1122	6	NIC	ENSMUSG00000025574.14	novel	1440	7	NA	NA	0	17	combination_of_known_splicesites	FALSE	canonical	3	49	junction_2	399.354178643469	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGGTTTCCCTAACTTG	NA	False	NA	0	True	ATTAAA	-33	NA	117716673	117706334	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_117706966_117707272_117707393_117712922_117713017_117715496_117715608_117716426_117716459_117716539
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034194	chr11	+	2311	11	FSM	ENSMUSG00000017718.16	ENSMUST00000073388.13	2327	11	16	0	16	0	multi-exon	FALSE	canonical	3	29	junction_1	8.17312669668102	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGTTTTCTGTTTGTTT	NA	False	NA	15	True	NA	NA	NA	117716765	117730734	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_117716833_117718904_117718996_117723170_117723276_117723353_117723403_117725592_117725679_117725771_117725845_117725970_117726069_117726328_117726408_117726491_117726634_117727233_117727339_117729318
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034203	chr11	+	980	4	FSM	ENSMUSG00000017716.16	ENSMUST00000081387.11	947	4	-22	-11	-22	0	multi-exon	FALSE	canonical	3	1683	junction_1	206.515536138729	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTCTTGGAGAAATGG	NA	False	NA	40	True	AATAAA	-29	NA	117740054	117746569	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_117740288_117740579_117740690_117743488_117743607_117746050
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034207	chr11	+	3351	3	FSM	ENSMUSG00000017716.16	ENSMUST00000093906.5	3334	3	-27	10	-27	1	multi-exon	FALSE	canonical	3	1683	junction_1	252.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAAGCTCTGTCTGTCTT	NA	False	NA	30	True	AATAAA	-19	NA	117740117	117746559	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_117740288_117740579_117740690_117743488
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034223	chr11	+	215	1	Intergenic	novelGene_1102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACAAAACAGGGCCGGT	6777	False	NA	NA	False	NA	NA	NA	117839069	117839284	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_117839100_117839300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034232	chr11	-	2603	2	FSM	ENSMUSG00000053113.4	ENSMUST00000054002.4	2552	2	-50	-1	-50	1	multi-exon	FALSE	canonical	3	1319	junction_1	0	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGAGCCTTTCTTTCC	NA	False	NA	NA	False	AATAAA	-31	NA	117860062	117856903	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_117859145_117859700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034234	chr11	-	2700	3	NIC	ENSMUSG00000053113.4	novel	2552	2	NA	NA	30	0	combination_of_known_junctions	FALSE	canonical	1	22	junction_2	648.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTGAGCCTTTCTTTC	NA	False	NA	NA	False	AATAAA	-30	NA	117860843	117856904	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_117859145_117859700_117859929_117860611
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034242	chr11	+	186	1	Intergenic	novelGene_1103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTATATTATTTATTGTT	NA	False	NA	NA	False	NA	NA	NA	117875751	117875937	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_117875800_117875900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034263	chr11	-	3170	13	FSM	ENSMUSG00000017132.18	ENSMUST00000017276.14	3135	13	-30	-5	2	-4	multi-exon	FALSE	canonical	3	24	junction_4	8.05665701282003	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGTTCTGCTCTGCTG	8602	False	NA	-1	True	AATAAA	-21	NA	118139416	118054995	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_118056921_118059841_118059997_118061651_118061724_118068045_118068123_118073045_118073158_118073590_118073740_118074707_118074821_118075797_118075879_118076206_118076326_118076585_118076653_118083222_118083288_118084440_118084524_118139264
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034270	chr11	+	184	1	Intergenic	novelGene_1104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAATATATTCAGAG	NA	False	NA	NA	False	NA	NA	NA	118125111	118125295	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_118125100_118125300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034291	chr11	+	203	1	Intergenic	novelGene_1105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCAAGATAGCTTCCCAC	NA	False	NA	NA	False	AAAAAG	-3	NA	118227860	118228063	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_118227900_118228100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034300	chr11	-	2854	5	FSM	ENSMUSG00000025575.15	ENSMUST00000106288.8	2873	5	20	-1	-9	1	multi-exon	FALSE	canonical	3	81	junction_4	37.662979170533	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTGTCTATGTTGGCT	9012	False	NA	0	True	AATAAA	-18	NA	118309858	118297113	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399_118308481_118309755
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034322	chr11	+	2641	14	FSM	ENSMUSG00000033857.13	ENSMUST00000135383.9	4064	14	-2	1425	-2	11	multi-exon	FALSE	canonical	3	81	junction_11	10.2772224737595	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTTCTTTTGAGAATGG	NA	False	NA	17	True	CATAAA	-24	NA	118367652	118378610	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_118367931_118369708_118369780_118369911_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377273_118377380_118377647_118377763_118377916
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034334	chr11	+	2515	14	NIC	ENSMUSG00000033857.13	novel	4064	14	NA	NA	-4	11	combination_of_known_junctions	FALSE	canonical	3	25	junction_11	24.1545810765215	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTTCTTTTGAGAATGG	NA	False	NA	17	True	CATAAA	-24	NA	118367781	118378610	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_118367931_118369708_118369780_118369911_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377270_118377380_118377647_118377763_118377916
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034339	chr11	+	197	1	Intergenic	novelGene_1106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAGATTCTTTTAAAAA	NA	False	NA	3	True	NA	NA	NA	118905837	118906034	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_118905800_118906000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034352	chr11	+	3742	5	FSM	ENSMUSG00000025577.8	ENSMUST00000026662.8	3807	5	70	-5	70	5	multi-exon	TRUE	canonical	3	204	junction_1	10.9630059746403	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTTCTCTTCCCCTTTTT	NA	False	NA	18	True	AATAAA	-20	NA	118913857	118922101	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_118914007_118914083_118914128_118915000_118915067_118917275_118917382_118918724
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034365	chr11	-	2656	5	FSM	ENSMUSG00000039989.8	ENSMUST00000026665.8	5179	5	-59	2582	-59	1218	multi-exon	FALSE	canonical	3	62	junction_3	7	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGTCCGAGATTAGCT	NA	False	NA	0	True	ATTAAA	-21	NA	118977106	118970980	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_118973128_118973342_118973410_118975388_118975455_118976582_118976627_118976774
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034377	chr11	+	259	1	Intergenic	novelGene_1107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACACAAAACCCAGGAATT	7685	False	NA	NA	False	NA	NA	NA	119097071	119097330	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_119097100_119097300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034386	chr11	+	141	1	Intergenic	novelGene_1108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGAGAAGGGGAGGCCT	NA	False	NA	NA	False	NA	NA	NA	119157698	119157839	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_119157700_119157800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034399	chr11	+	3368	20	FSM	ENSMUSG00000025579.15	ENSMUST00000026666.13	3363	20	-4	-1	-4	1	multi-exon	TRUE	canonical	3	38	junction_1	100.783495768854	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCACGTCACCTCATGT	NA	False	NA	20	True	AATAAA	-21	NA	119158847	119176281	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_119158918_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034402	chr11	+	3502	20	FSM	ENSMUSG00000025579.15	ENSMUST00000106259.9	3633	20	135	-4	-4	4	multi-exon	FALSE	canonical	3	393	junction_7	40.3001893687597	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACGTCACCTCATGTCTA	NA	False	NA	23	True	AATAAA	-24	NA	119158847	119176284	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_119159049_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034412	chr11	-	1527	12	FSM	ENSMUSG00000025580.16	ENSMUST00000026667.15	1509	12	-10	-8	-10	8	multi-exon	FALSE	canonical	2	960	junction_1	150.634415963708	424	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGATCTTTGTGGTGTCAC	NA	False	NA	-2	True	ATTAAA	-28	NA	119190925	119179180	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_119179386_119179485_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119185530_119186298_119186362_119186892_119186960_119188630_119188704_119190653
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034422	chr11	+	205	1	Intergenic	novelGene_1109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTACATTTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	119180900	119181105	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_119180900_119181100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034436	chr11	+	181	1	Intergenic	novelGene_1110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTAAATTCCACG	179	False	NA	NA	False	NA	NA	NA	119275074	119275255	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_119275100_119275300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034448	chr11	+	3388	16	ISM	ENSMUSG00000070327.15	ENSMUST00000131035.10	16716	67	77085	0	-7872	0	3prime_fragment	FALSE	canonical	3	92	junction_3	20.2730253182784	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGAGTCCTGTTTGGGC	5429	False	NA	14	True	AATAAA	-14	NA	119361010	119378244	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_+_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034456	chr11	+	202	1	Genic_Genomic	ENSMUSG00000039850.17	novel	NA	NA	NA	NA	9266	8	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACTACCAACTGAATGAC	4124	False	NA	NA	False	AAGAAA	-5	NA	119402069	119402271	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr11_+_119402100_119402300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034465	chr11	-	5217	5	FSM	ENSMUSG00000025582.5	ENSMUST00000026670.5	5217	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	7.08872343937891	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTCATTGGATTCTT	NA	False	NA	NA	False	AGTAAA	-15	NA	119438579	119429544	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_119433521_119434007_119434188_119435417_119435663_119437477_119437686_119437971
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034470	chr11	+	6763	34	FSM	ENSMUSG00000025583.16	ENSMUST00000026671.13	6594	34	-163	-6	-9	6	multi-exon	TRUE	canonical	3	92	junction_14	15.8664073872836	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTTGCCAGATGAGA	2141	False	NA	14	True	AATAAA	-21	NA	119493811	119790239	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034486	chr11	+	1557	8	FSM	ENSMUSG00000025371.13	ENSMUST00000026434.13	1557	8	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_5	11.6303613925986	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGTTTAGTGTCTTGGT	NA	False	NA	18	True	ATTAAA	-33	NA	119804635	119810374	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_119804764_119806238_119806349_119806457_119806546_119806850_119806938_119807506_119807573_119807754_119807836_119808809_119808865_119809432
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034507	chr11	-	177	1	Intergenic	novelGene_1111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAATCTGATATTTAT	NA	False	NA	NA	False	NA	NA	NA	119841078	119840901	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_119840900_119841100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034514	chr11	-	177	1	Intergenic	novelGene_1112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTTTTGAGACAGG	NA	False	NA	NA	False	NA	NA	NA	119944727	119944550	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_119944600_119944700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034518	chr11	-	3607	26	FSM	ENSMUSG00000039781.15	ENSMUST00000106227.8	3578	26	-20	-9	-20	9	multi-exon	FALSE	canonical	0	0	junction_17	26.0287840668749	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTTGTCTTTCTCTACT	NA	False	NA	0	True	AGTAAA	-36	NA	119977673	119955246	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_119955536_119955610_119955672_119956213_119956378_119956463_119956642_119956736_119956880_119957519_119957595_119957746_119957865_119957955_119958064_119958771_119958974_119959523_119959627_119961114_119961232_119961310_119961437_119961617_119961729_119962184_119962362_119962702_119962886_119963235_119963331_119963663_119963803_119963953_119964071_119964566_119964685_119966389_119966537_119966914_119967029_119967744_119967867_119968152_119968268_119972069_119972165_119974621_119974816_119977477
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034536	chr11	-	2757	13	NIC	ENSMUSG00000025377.15	novel	2770	13	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	21.0797098335501	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCACTTGGGCTGGTTG	NA	False	NA	-6	True	AATAAA	-18	NA	119989526	119981354	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_119982839_119983676_119983812_119984070_119984150_119984242_119984357_119984516_119984692_119984939_119985144_119986169_119986242_119986359_119986436_119986629_119986698_119987390_119987501_119987703_119987796_119988334_119988408_119989451
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034546	chr11	+	505	3	FSM	ENSMUSG00000078572.4	ENSMUST00000106223.4	781	3	-5	281	-5	10	multi-exon	FALSE	canonical	3	883	junction_2	30.5	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTCTCTCCCAAGGACAA	NA	False	NA	16	True	TATAAA	-16	NA	119989748	119991250	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_119989892_119989973_119990085_119990999
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034610	chr11	-	186	1	Intergenic	novelGene_1113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGACTTGGTCATGGTG	315	False	NA	NA	False	NA	NA	NA	120046853	120046667	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_120046700_120046900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034613	chr11	+	189	1	Intergenic	novelGene_1114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAATAGCAGTCGAGTGAG	804	False	NA	NA	False	NA	NA	NA	120099750	120099939	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_120099800_120099900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034619	chr11	+	199	1	Intergenic	novelGene_1115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTCATAAATTAGGCCGG	4	True	NA	NA	False	NA	NA	NA	120232973	120233172	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_120233000_120233200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034626	chr11	+	191	1	Intergenic	novelGene_1116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGATCCTGTCACCTCC	1748	False	NA	18	True	NA	NA	NA	120235699	120235890	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_120235700_120235900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034634	chr11	-	1967	6	FSM	ENSMUSG00000062825.16	ENSMUST00000071555.13	1952	6	-12	-3	-12	3	multi-exon	TRUE	canonical	3	5636	junction_4	454.292680988809	3738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTCTGGTTTGGCAC	NA	False	NA	-18	True	AATAAA	-21	NA	120239380	120236512	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_120237360_120237462_120237645_120237736_120238176_120238461_120238702_120238794_120238924_120239250
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034646	chr11	-	1971	5	FSM	ENSMUSG00000062825.16	ENSMUST00000106215.11	1827	5	-143	-1	-143	0	multi-exon	FALSE	canonical	3	5636	junction_4	437.152933765747	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTGTTTTTCTGGTTTGG	NA	False	NA	-21	True	AATAAA	-18	NA	120239060	120236515	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_120237360_120237462_120237645_120237736_120238176_120238461_120238702_120238794
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034654	chr11	+	165	1	Intergenic	novelGene_1117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAGATGCAGCCG	NA	False	NA	NA	False	NA	NA	NA	120247950	120248115	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_120248000_120248100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034658	chr11	-	3172	10	FSM	ENSMUSG00000025384.16	ENSMUST00000026448.10	3193	10	23	-2	-5	2	multi-exon	FALSE	canonical	1	16	junction_4	19.8612470857816	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTTGTGCTCTGTG	NA	False	NA	-1	True	NA	NA	NA	120269567	120260385	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120263932_120264070_120264707_120265478_120266242_120266400_120267531_120268488_120269153_120269273_120269367
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034672	chr11	-	4171	17	FSM	ENSMUSG00000039703.16	ENSMUST00000044271.15	4121	17	-50	0	-50	0	multi-exon	FALSE	canonical	3	355	junction_10	42.5235229020362	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGCTCCCAGTGCATT	NA	False	NA	-8	True	AATAAA	-16	NA	120328584	120271195	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034699	chr11	+	2878	22	FSM	ENSMUSG00000025793.18	ENSMUST00000106205.9	2900	22	26	-4	26	4	multi-exon	FALSE	canonical	3	286	junction_14	47.8204313112466	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATTGATTGTTCGGGCA	8208	False	NA	17	True	AATAAA	-18	NA	120358486	120374809	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369915_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034713	chr11	+	3158	21	ISM	ENSMUSG00000025793.18	ENSMUST00000106205.9	2900	22	31	-2	31	2	intron_retention	FALSE	canonical	3	286	junction_14	46.7074940453885	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGATTGATTGTTCGGG	8213	False	NA	15	True	AATAAA	-16	NA	120358491	120374807	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369915_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034725	chr11	+	981	5	FSM	ENSMUSG00000039640.8	ENSMUST00000043627.8	1316	5	24	311	24	297	multi-exon	FALSE	canonical	3	1076	junction_2	33.5186515241887	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTCCTGAACCTTG	8979	False	NA	25	True	TATAAA	-17	NA	120375462	120379580	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_120375595_120376068_120376256_120376481_120376569_120378922_120379061_120379143
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034730	chr11	+	1991	11	FSM	ENSMUSG00000025792.10	ENSMUST00000026899.4	2023	11	32	0	-16	0	multi-exon	FALSE	canonical	3	77	junction_8	8.74356906531881	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGGGGGCTGGCAGATC	NA	False	NA	23	True	AATAAA	-37	NA	120382697	120390013	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_120382903_120385302_120385423_120385785_120385901_120385985_120386035_120386271_120386314_120387248_120387293_120387461_120387533_120387839_120387933_120388209_120388288_120388745_120388803_120388896
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034740	chr11	+	179	1	Intergenic	novelGene_1118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATGACTGAAGAA	NA	False	NA	NA	False	NA	NA	NA	120405315	120405494	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_120405300_120405500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034745	chr11	-	1205	5	FSM	ENSMUSG00000061111.9	ENSMUST00000034913.5	1205	5	5	-5	5	5	multi-exon	FALSE	canonical	3	334	junction_4	30.2861354418156	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGGCAGTCTGTCAGGT	NA	False	NA	-19	True	AATAAA	-22	NA	120440548	120433708	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_120434575_120434729_120434832_120435506_120435626_120435702_120435755_120440482
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034761	chr11	-	2927	11	FSM	ENSMUSG00000025130.12	ENSMUST00000026122.11	2861	11	-65	-1	-65	1	multi-exon	FALSE	canonical	3	1798	junction_7	89.3174674965653	500	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTGCTGCTTTATTTTG	3302	False	NA	-3	True	AATAAA	-22	NA	120464144	120451122	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_120452087_120452986_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346_120462554_120463482
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034772	chr11	+	163	1	Intergenic	novelGene_1119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTCTTTTTTGTG	1746	False	NA	NA	False	NA	NA	NA	120459866	120460029	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_120459900_120460000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034780	chr11	+	192	1	Intergenic	novelGene_1120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGCACTTGGGAGGCAG	2314	False	NA	NA	False	NA	NA	NA	120460434	120460626	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_120460400_120460600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034787	chr11	-	1879	6	FSM	ENSMUSG00000025132.14	ENSMUST00000106197.10	1867	6	-11	-1	-11	1	multi-exon	TRUE	canonical	3	3168	junction_5	160.793780974265	2486	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTCTGTGCAGCTTG	NA	False	NA	-9	True	AATAAA	-23	NA	120472461	120468928	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_120470257_120470341_120470406_120470493_120470571_120470792_120470877_120471007_120471220_120472347
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034870	chr11	-	2425	13	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	-4	0	intron_retention	FALSE	canonical	3	48	junction_6	110.81174601799	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTAGGCTCCCGACCCC	NA	False	NA	-6	True	AATAAA	-16	NA	120508743	120500912	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120503428_120503671_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034910	chr11	-	1888	8	FSM	ENSMUSG00000025140.16	ENSMUST00000026133.15	1861	8	-16	-11	5	11	multi-exon	FALSE	canonical	3	750	junction_7	93.9428832116752	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCAGTCAACCTATTTGT	NA	False	NA	-5	True	AATAAA	-24	NA	120534590	120530230	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034932	chr11	-	1813	8	NNC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	-12	2	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_7	342.313318705635	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCCAGAGCTCCAGTCAA	NA	False	NA	-14	True	AATAAA	-15	NA	120534542	120530239	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534096_120534505
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034933	chr11	-	1838	8	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	3	34	junction_7	343.012048339592	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCCAGAGCTCCAGTCAA	NA	False	NA	-14	True	AATAAA	-15	NA	120534572	120530239	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534528
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034960	chr11	+	1839	16	FSM	ENSMUSG00000025142.19	ENSMUST00000026135.15	1820	16	-19	0	0	0	multi-exon	FALSE	canonical	3	887	junction_3	62.8477525453377	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	NA	False	NA	16	True	AATAAA	-20	NA	120563798	120600273	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034972	chr11	+	2051	14	NIC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	-4	0	intron_retention	FALSE	canonical	3	887	junction_3	62.6465618847222	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	NA	False	NA	16	True	AATAAA	-20	NA	120563877	120600273	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120600073_120600169
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034979	chr11	+	1890	16	NIC	ENSMUSG00000025142.19	novel	870	8	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	238.262376383683	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	NA	False	NA	16	True	AATAAA	-20	NA	120564191	120600273	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_120564441_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034984	chr11	+	2076	16	NIC	ENSMUSG00000025142.19	novel	870	8	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	243.577411833601	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	NA	False	NA	16	True	AATAAA	-20	NA	120564192	120600273	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_+_120564628_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000034998	chr11	-	613	5	FSM	ENSMUSG00000025144.18	ENSMUST00000055424.13	606	5	-6	-1	-6	1	multi-exon	FALSE	canonical	3	556	junction_4	137.848422189012	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTTTCTCTTTGCCAT	NA	False	NA	-1	True	AATAAA	-20	NA	120604570	120601766	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_120602133_120602215_120602305_120602528_120602583_120602669_120602722_120604518
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035003	chr11	-	878	6	FSM	ENSMUSG00000025144.18	ENSMUST00000106154.8	873	6	-5	0	1	0	multi-exon	FALSE	canonical	3	17	junction_5	397.451380674417	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	False	NA	-2	True	AATAAA	-19	NA	120604563	120601767	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_120602133_120602215_120602305_120602528_120602583_120602669_120602722_120603265_120603539_120604518
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035016	chr11	+	2466	18	FSM	ENSMUSG00000025145.14	ENSMUST00000026139.14	2492	18	26	0	0	0	multi-exon	FALSE	canonical	3	36	junction_12	7.88805763716247	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCGTCCAGTTCCTTTCT	6090	False	NA	NA	False	GATAAA	-1	NA	120604776	120611954	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120606761_120607881_120607995_120608305_120608365_120608650_120608729_120608862_120608999_120609069_120609148_120609267_120609380_120609475_120609547_120609865_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035030	chr11	+	215	1	Intergenic	novelGene_1121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTAAGAGTCTTGCCAG	9476	False	NA	NA	False	NA	NA	NA	120626786	120627001	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_120626800_120627000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035038	chr11	+	1597	2	Genic_Genomic	ENSMUSG00000078249.6	novel	1626	1	NA	NA	-2	2	multi-exon	FALSE	canonical	3	1960	junction_1	0	1278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACAAGAGTCCTGCCTCA	NA	False	NA	NA	False	NA	NA	NA	120653617	120655247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr11_+_120653817_120653849
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035045	chr11	+	1630	1	FSM	ENSMUSG00000078249.6	ENSMUST00000105046.4	1626	1	-2	-2	-2	2	mono-exon	FALSE	NA	NA	NA	NA	NA	1045	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACAAGAGTCCTGCCTCA	NA	False	NA	NA	False	NA	NA	NA	120653617	120655247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_120653600_120655200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035065	chr11	-	2137	8	FSM	ENSMUSG00000025158.8	ENSMUST00000026156.8	2118	8	-16	-3	-16	1	multi-exon	FALSE	canonical	3	122	junction_3	23.1137382947714	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTCCTCTTGTCATA	NA	False	NA	-3	True	AGTAAA	-20	NA	120675049	120671570	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_120672730_120672804_120672891_120673208_120673375_120673454_120673544_120673832_120673987_120674093_120674197_120674560_120674610_120674718
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035099	chr11	+	1846	14	FSM	ENSMUSG00000025156.18	ENSMUST00000208737.2	1843	14	-3	0	-3	0	multi-exon	TRUE	canonical	3	121	junction_6	299.627579489159	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAAGGCTCCTTTCCTTT	1401	False	NA	1	True	ATTAAA	-18	NA	120675107	120679927	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677837_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035122	chr11	-	2139	14	NIC	ENSMUSG00000025155.16	novel	1909	14	NA	NA	-1	16	combination_of_known_junctions	FALSE	canonical	1	287	junction_5	197.871304777721	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGCCTATGGCTGTTGC	NA	False	NA	0	True	AATAAA	-33	NA	120687230	120680010	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686764
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035137	chr11	-	1848	14	NIC	ENSMUSG00000025155.16	novel	1909	14	NA	NA	-1	5	combination_of_known_junctions	FALSE	canonical	1	287	junction_5	178.060258399514	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATCTCTAGTGATGCCT	NA	False	NA	-11	True	AATAAA	-22	NA	120687230	120680021	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035146	chr11	-	1913	14	FSM	ENSMUSG00000025155.16	ENSMUST00000167023.8	1909	14	-3	-1	0	0	multi-exon	FALSE	canonical	1	70	junction_13	260.320262471546	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGATCTCTAGTGA	NA	False	NA	-16	True	AATAAA	-17	NA	120687224	120680026	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686968
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035154	chr11	-	2124	14	NNC	ENSMUSG00000025155.16	novel	1909	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	84	junction_13	257.446748673132	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGATCTCTAGTGA	NA	False	NA	-16	True	AATAAA	-17	NA	120687224	120680026	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686757
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035172	chr11	-	8383	43	FSM	ENSMUSG00000025153.10	ENSMUST00000055655.9	10050	43	438	1229	-14	30	multi-exon	TRUE	canonical	3	375	junction_39	98.8392726301593	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCCTTCGGTTCAGTCT	NA	False	NA	-10	True	ATTAAA	-16	NA	120714935	120697900	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035182	chr11	+	219	1	Intergenic	novelGene_1122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTCAGTACTGGCTGGAG	6323	False	NA	NA	False	AAGAAA	-23	NA	120728577	120728796	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_120728600_120728800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035203	chr11	+	2121	5	FSM	ENSMUSG00000025161.17	ENSMUST00000100130.10	2386	5	41	224	27	1	multi-exon	FALSE	canonical	3	33	junction_1	128.437484793186	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTCTGGCCCTCATTAGC	NA	False	NA	23	True	AAAAAG	-1	NA	120839933	120849602	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_120839977_120846051_120846296_120846624_120846769_120847180_120847949_120848680
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035229	chr11	+	203	1	Intergenic	novelGene_1123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCAGTAACCATAGCACAT	NA	False	NA	NA	False	NA	NA	NA	120872244	120872447	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_120872200_120872400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035235	chr11	-	1683	3	FSM	ENSMUSG00000039337.4	ENSMUST00000039146.4	2046	3	363	0	363	0	multi-exon	FALSE	canonical	3	61	junction_1	13.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTTGCAGTCTCCTCAT	NA	False	NA	0	True	AATAAA	-19	NA	121009140	121007040	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_121008523_121008652_121008727_121009013
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035247	chr11	+	1738	3	FSM	ENSMUSG00000039329.9	ENSMUST00000039088.9	1745	3	7	0	7	0	multi-exon	FALSE	canonical	3	732	junction_1	1	295	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTATGTGTATGGTTT	NA	False	NA	26	True	AATAAA	-20	NA	121036975	121039145	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_121037049_121037353_121037428_121037554
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035258	chr11	-	1305	9	FSM	ENSMUSG00000025169.7	ENSMUST00000026169.7	1308	9	3	0	3	0	multi-exon	FALSE	canonical	3	143	junction_7	19.9483708607996	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGATCTGGGCGCTGC	NA	False	NA	-7	True	AGTAAA	-41	NA	121095534	121068416	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_121068765_121074236_121074361_121085905_121086060_121087562_121087620_121088256_121088322_121090591_121090635_121091736_121091813_121093716_121093935_121095314
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035271	chr11	+	175	1	Intergenic	novelGene_1124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGAGAAATCGAGA	NA	False	NA	NA	False	NA	NA	NA	121104317	121104492	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_121104300_121104500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035273	chr11	-	2395	7	FSM	ENSMUSG00000039294.15	ENSMUST00000038709.14	2417	7	22	0	18	0	multi-exon	FALSE	canonical	0	0	junction_6	26.4790273403101	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCCTTTCTGTTTTCTGC	NA	False	NA	0	True	AATAAA	-22	NA	121120113	121113413	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_121115059_121115374_121115520_121116629_121116727_121117594_121117669_121118068_121118111_121119153_121119297_121119864
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035300	chr11	+	214	1	Intergenic	novelGene_1125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCCATCTTAGGGAGGAA	NA	False	NA	NA	False	TTTAAA	-17	NA	121138188	121138402	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_+_121138200_121138400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035312	chr11	+	5044	9	FSM	ENSMUSG00000039275.10	ENSMUST00000106113.2	5029	9	-11	-4	-11	4	multi-exon	FALSE	canonical	3	175	junction_8	36.2594815186318	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGAGTATCATTGTCTTC	4651	False	NA	NA	False	AATAAA	-24	NA	121150804	121200726	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121190409_121190620_121197593
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035331	chr11	-	2307	10	FSM	ENSMUSG00000025173.14	ENSMUST00000026173.13	2321	10	14	0	14	0	multi-exon	FALSE	canonical	3	419	junction_4	31.7350139610984	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAGAGCCATATGTAATG	NA	False	NA	1	True	AATAAA	-33	NA	121245257	121218049	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221059_121226209_121226401_121227801_121227897_121229382_121229471_121231939_121232042_121240057_121240133_121245052
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035336	chr11	-	2243	10	NNC	ENSMUSG00000025173.14	novel	2321	10	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_4	138.714023252567	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAGCAGAGCCATATGT	NA	False	NA	-3	True	AATAAA	-29	NA	121245231	121218053	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221025_121226209_121226401_121227801_121227897_121229382_121229471_121231939_121232042_121240057_121240133_121245052
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035354	chr11	+	3912	39	FSM	ENSMUSG00000039230.15	ENSMUST00000103013.10	3906	39	-5	-1	-5	1	multi-exon	TRUE	canonical	0	0	junction_21	67.5521189983218	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCTCTGCCTATCTCT	NA	False	NA	34	True	ATTAAA	-16	NA	121342769	121507991	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469602_121470973_121470997_121473578_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035377	chr11	-	2689	3	Intergenic	novelGene_1126	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	94	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGTCTTGCTTGGTTCC	NA	False	NA	0	True	NA	NA	NA	121816143	121795182	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_121797657_121799014_121799142_121816055
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035393	chr11	-	3236	4	Intergenic	novelGene_1127	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_1	17.326921891156	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGTGACCTGATTCTTA	NA	False	NA	NA	False	NA	NA	NA	121847568	121832032	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr11_-_121834966_121836089_121836151_121836329_121836457_121847453
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035412	chr12	+	3152	5	ISM	ENSMUSG00000079179.10	ENSMUST00000179924.8	823	8	-400	8656	-11	-122	5prime_fragment	FALSE	canonical	3	40	junction_4	60.7345659406569	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAAGAGTGTTAATTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	3285514	3291288	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288028_3288113_3288833
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035414	chr12	+	2210	3	ISM	ENSMUSG00000079179.10	ENSMUST00000177896.8	2872	7	-7	12103	-7	1	5prime_fragment	FALSE	canonical	3	138	junction_2	36.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCTCAGGACAAATTTG	NA	False	NA	11	True	AATAAA	-20	NA	3285518	3288274	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr12_+_3287413_3287590_3287661_3288028
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035418	chr12	-	3559	6	FSM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	-45	-1	-45	1	multi-exon	FALSE	canonical	3	1286	junction_2	62.4422933595492	880	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTTTGGTTTTCATT	NA	False	NA	-1	True	TATAAA	-20	NA	3360014	3297426	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307006_3314688_3314750_3359291
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035449	chr12	+	184	1	Intergenic	novelGene_1128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAAAAGCTGTCCTCTG	NA	False	NA	NA	False	NA	NA	NA	3604045	3604229	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_3604000_3604200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035459	chr12	+	206	1	Intergenic	novelGene_1129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGACACAAAACAGTCTTT	NA	False	NA	NA	False	NA	NA	NA	3619691	3619897	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_3619700_3619900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035465	chr12	+	2374	19	NIC	ENSMUSG00000071454.14	novel	2390	20	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	85.0941562746747	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGTGTTCCTTCCG	NA	False	NA	27	True	AAAAAG	-7	NA	3622407	3831398	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3829618_3829655_3831105
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035495	chr12	-	219	1	Intergenic	novelGene_1130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	72	False	NA	NA	False	AAAAAG	-22	NA	3646323	3646104	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_3646100_3646300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035498	chr12	-	180	1	Intergenic	novelGene_1131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAAATCTACTTTTA	9359	False	NA	NA	False	NA	NA	NA	3681797	3681617	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_3681600_3681800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035513	chr12	-	167	1	Antisense	novelGene_ENSMUSG00000071454.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTTCAAAAAAAAGAAAAGT	NA	False	NA	NA	False	NA	NA	NA	3695969	3695802	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr12_-_3695800_3696000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035526	chr12	+	201	1	Intergenic	novelGene_1132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCTGTTTTTTTAAGCC	4070	False	NA	NA	False	NA	NA	NA	3877240	3877441	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_3877200_3877400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035534	chr12	+	3431	18	FSM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	52	-1155	36	450	multi-exon	FALSE	canonical	3	65	junction_1	19.4274446476198	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGCTTTCTGTCTAAGT	NA	False	NA	9	True	AATAAA	-18	NA	3941779	3958997	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_3941861_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035555	chr12	+	190	1	Intergenic	novelGene_1133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGAAATCTGCCTGCCTC	1363	False	NA	NA	False	NA	NA	NA	4134877	4135067	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_4134900_4135100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035561	chr12	+	190	1	Intergenic	novelGene_1134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGCAGAGACCGGAAGACC	NA	False	NA	NA	False	NA	NA	NA	4151671	4151861	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_4151700_4151900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035566	chr12	+	191	1	Intergenic	novelGene_1135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGGGCGCGCGGGAAGC	NA	False	NA	NA	False	NA	NA	NA	4175209	4175400	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_4175200_4175400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035575	chr12	+	4724	22	NIC	ENSMUSG00000020654.16	novel	4728	22	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	15.3109863775942	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTGTTGTGGCAATTC	NA	False	NA	8	True	ATTAAA	-18	NA	4183403	4263525	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_4183779_4184152_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258576_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035579	chr12	-	2208	7	FSM	ENSMUSG00000020652.18	ENSMUST00000140975.8	4348	7	329	1811	0	4	multi-exon	FALSE	canonical	3	46	junction_6	17.0953209972788	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCAGATTCTTTGTTAAA	NA	False	NA	-5	True	AATAAA	-23	NA	4283965	4263477	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4281515_4281683_4283530_4283658_4283751
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035584	chr12	-	2144	7	NNC	ENSMUSG00000020652.18	novel	4348	7	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_6	14.9666295470958	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGCAGATTCTTTGTTA	NA	False	NA	-7	True	AATAAA	-21	NA	4283933	4263479	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4281515_4281683_4283530_4283658_4283781
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035605	chr12	-	5299	23	FSM	ENSMUSG00000020647.11	ENSMUST00000085814.5	7329	23	-32	2062	-32	17	multi-exon	FALSE	canonical	3	76	junction_22	13.9950552070342	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCACTTTTGTTGGGAGAT	NA	False	NA	NA	False	NA	NA	NA	4527214	4299423	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_4299751_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035610	chr12	-	5202	22	NIC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	10	17	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	24.557951268816	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCACTTTTGTTGGGAGAT	NA	False	NA	NA	False	NA	NA	NA	4527172	4299423	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_-_4299751_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035617	chr12	+	241	1	Intergenic	novelGene_1136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGCCAACCAACTGAACA	NA	False	NA	NA	False	AATGAA	-28	NA	4351054	4351295	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_4351100_4351300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035625	chr12	+	193	1	Intergenic	novelGene_1137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTATAATGGGTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	4455925	4456118	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_4455900_4456100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035636	chr12	-	321	2	NIC	ENSMUSG00000112819.2	novel	457	3	NA	NA	-23	3	combination_of_known_splicesites	FALSE	canonical	3	47	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGGCTACATTT	NA	False	NA	NA	False	NA	NA	NA	4603808	4602542	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_-_4602746_4603690
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035642	chr12	-	255	1	Genic_Genomic	ENSMUSG00000112505.2	novel	NA	NA	NA	NA	4181	80	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAGTTTTAAAACAAGTGA	NA	False	NA	NA	False	NA	NA	NA	4622575	4622320	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr12_-_4622300_4622600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035656	chr12	-	218	1	Intergenic	novelGene_1138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAACATATTAATTGTAAA	NA	False	NA	NA	False	AAAAAG	-19	NA	4633694	4633476	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_4633500_4633700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035661	chr12	+	5982	39	FSM	ENSMUSG00000020640.11	ENSMUST00000062580.8	5987	39	7	-2	7	0	multi-exon	TRUE	canonical	3	57	junction_33	12.8594576467878	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTCAAAGCTTGACTCT	7393	False	NA	NA	False	AATAAA	-22	NA	4643014	4763952	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_4643233_4663242_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4747141_4747264_4750319_4750427_4751181_4751366_4756259_4756359_4756964_4757133_4757529_4757746_4758112_4758235_4758944_4759028_4761952_4762037_4762466_4762641_4763039
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035673	chr12	+	793	4	FSM	ENSMUSG00000037361.9	ENSMUST00000046207.9	1180	4	-10	397	-10	-4	multi-exon	FALSE	canonical	3	1039	junction_3	63.8609600790829	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTTCTGTTAAACTTC	NA	False	NA	31	True	AATAAA	-21	NA	4867533	4877262	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_4867820_4870593_4870713_4876757_4876897_4877013
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035684	chr12	-	162	1	Intergenic	novelGene_1139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAGATTTATTTTAT	9878	False	NA	NA	False	NA	NA	NA	4907132	4906970	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_4907000_4907100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035693	chr12	+	208	1	ISM	ENSMUSG00000051721.7	ENSMUST00000223551.2	4317	4	15771	762	8928	-762	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGAAAGTTTTACAAAAAT	1256	False	NA	NA	False	TTTAAA	-2	NA	4909073	4909281	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr12_+_4909100_4909300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035704	chr12	-	4728	7	FSM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	186	-2218	-80	2218	multi-exon	FALSE	canonical	3	1036	junction_3	130.609362434534	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAGTAAGACGTGGCTT	NA	False	NA	-18	True	AGTAAA	-21	NA	4957519	4926813	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035742	chr12	+	188	1	Intergenic	novelGene_1140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTCTAGATAGAGGATG	NA	False	NA	NA	False	NA	NA	NA	8091112	8091300	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_8091100_8091300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035751	chr12	+	2731	7	NIC	ENSMUSG00000037669.16	novel	2737	7	NA	NA	-8	1	combination_of_known_junctions	TRUE	canonical	3	188	junction_5	23.7533623350932	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGTGTGGTCTGATCT	NA	False	NA	19	True	AATAAA	-19	NA	8258125	8335760	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_8258205_8270599_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8325807_8325891_8333899
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035757	chr12	+	2716	7	FSM	ENSMUSG00000037669.16	ENSMUST00000037383.13	2737	7	21	0	-6	0	multi-exon	FALSE	canonical	3	35	junction_1	76.8839312788367	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTGTGGTCTGATC	NA	False	NA	18	True	AATAAA	-18	NA	8258127	8335759	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_8258193_8270599_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8325807_8325891_8333899
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035770	chr12	+	2959	7	FSM	ENSMUSG00000020605.10	ENSMUST00000020927.10	2959	7	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	12.8765506078125	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGTGTTGTTCTTTTCC	NA	False	NA	NA	False	AGTAAA	-24	NA	8363431	8393824	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_8363498_8367784_8367951_8371518_8371727_8373869_8374102_8386237_8386396_8387632_8387769_8391831
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035786	chr12	+	319	1	Intergenic	novelGene_1141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTTTCTTTTGATAGGG	NA	False	NA	NA	False	NA	NA	NA	8688972	8689291	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_8689000_8689300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035808	chr12	+	3191	5	FSM	ENSMUSG00000020592.15	ENSMUST00000020911.14	3157	5	-33	-1	-33	1	multi-exon	FALSE	canonical	3	214	junction_4	19.0574788468989	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTACTTGTGCAGT	NA	False	NA	NA	False	AATAAA	-29	NA	8821289	8843716	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_8821702_8839406_8839489_8840384_8840867_8841290_8841427_8841637
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035820	chr12	+	186	1	Intergenic	novelGene_1142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAGAAATCTTTTAAAAAG	NA	False	NA	NA	False	NA	NA	NA	8887755	8887941	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_8887800_8887900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035826	chr12	+	1422	7	FSM	ENSMUSG00000020585.5	ENSMUST00000020909.4	1773	7	351	0	351	0	multi-exon	FALSE	canonical	3	924	junction_4	59.5158708991886	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTCATGTTTATGCTA	NA	False	NA	38	True	AATAAA	-29	NA	8972014	8988742	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_8972295_8981627_8981749_8984695_8984773_8984865_8984989_8985986_8986083_8986696_8986796_8988116
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035852	chr12	-	1746	1	FSM	ENSMUSG00000066632.4	ENSMUST00000085735.4	1255	1	-73	-418	-73	418	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAAAAAAAAATCTTCC	NA	False	NA	NA	False	AATAAA	-15	NA	10950313	10948567	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_10948600_10950300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035859	chr12	+	181	1	Intergenic	novelGene_1143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAATGAGTCAGAATCC	NA	False	NA	NA	False	NA	NA	NA	11133458	11133639	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_11133500_11133600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035878	chr12	+	192	1	Intergenic	novelGene_1144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTCTGTGAAAGATGAT	NA	False	NA	NA	False	NA	NA	NA	11197949	11198141	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_11197900_11198100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035885	chr12	-	218	1	Intergenic	novelGene_1145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTACAGACATGGACAG	NA	False	NA	NA	False	NA	NA	NA	11275618	11275400	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_11275400_11275600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035894	chr12	+	5407	27	FSM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	196	0	-23	0	multi-exon	TRUE	canonical	3	574	junction_19	50.8148542090207	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTCATGCTTTTGTGA	4513	False	NA	NA	False	AATAAA	-23	NA	11316082	11369786	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035908	chr12	+	3619	25	NIC	ENSMUSG00000020608.8	novel	5272	26	NA	NA	3	204	combination_of_known_junctions	FALSE	canonical	3	100	junction_2	124.985825585233	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTTCCAGGTTG	4539	False	NA	15	True	AATAAA	-16	NA	11316108	11368248	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_11316290_11321729_11321873_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035925	chr12	+	4770	12	FSM	ENSMUSG00000020589.18	ENSMUST00000069005.10	1771	12	-31	-2968	7	2968	multi-exon	FALSE	canonical	3	60	junction_1	14.2718586881045	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTTGTATATGATGCA	NA	False	NA	NA	False	ATTAAA	-25	NA	12312146	12426364	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_12312240_12354181_12354324_12390679_12390760_12408045_12408168_12409213_12409320_12411435_12411573_12412015_12412094_12412252_12412370_12412461_12412542_12414720_12414848_12419894_12419966_12422747
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035933	chr12	+	188	1	Intergenic	novelGene_1146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAGTTGTTTCAAAACC	NA	False	NA	NA	False	NA	NA	NA	12330007	12330195	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_12330000_12330200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035936	chr12	+	194	1	Intergenic	novelGene_1147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGGGGGATAGGAGAAGA	NA	False	NA	NA	False	NA	NA	NA	12676813	12677007	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_12676800_12677000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035946	chr12	+	183	1	Intergenic	novelGene_1148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCCTTAGGCATCCTTT	NA	False	NA	NA	False	NA	NA	NA	12720816	12720999	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_12720800_12721000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035953	chr12	+	180	1	Intergenic	novelGene_1149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAATGCCACTGAAGC	NA	False	NA	3	True	NA	NA	NA	12851042	12851222	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_12851000_12851200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035958	chr12	+	400	1	FSM	ENSMUSG00000066629.3	ENSMUST00000085720.3	315	1	-36	-49	-36	49	mono-exon	FALSE	NA	NA	NA	NA	NA	526	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTCAATGGACAGGATT	NA	False	NA	NA	False	AATAAA	-28	NA	12961986	12962386	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_12962000_12962400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000035987	chr12	-	2526	26	FSM	ENSMUSG00000037149.11	ENSMUST00000071103.10	4842	26	-8	2324	-8	-2324	multi-exon	FALSE	canonical	3	1685	junction_15	174.121171601847	1272	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGTGTCTTCTTTTAAA	NA	False	NA	-1	True	AATAAA	-24	NA	13299222	13269297	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036001	chr12	+	7238	52	FSM	ENSMUSG00000020576.11	ENSMUST00000042953.10	7234	52	-9	5	-9	3	multi-exon	TRUE	canonical	3	21	junction_37	10.8075685101282	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGATGCCCTTTGAGTACT	NA	False	NA	NA	False	AATAAA	-23	NA	13319124	13633807	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_13319266_13321164_13321220_13322657_13322695_13323788_13323867_13324175_13324224_13329388_13329433_13335183_13335318_13338671_13338806_13339882_13339982_13350093_13350233_13356904_13356974_13360176_13360306_13367698_13367763_13371645_13371840_13372856_13373115_13374269_13374396_13378336_13378489_13380617_13380759_13381024_13381104_13385831_13385937_13386274_13386412_13402783_13402868_13406824_13406979_13410931_13411118_13412442_13412617_13424696_13424831_13427434_13427498_13429647_13429771_13440925_13441029_13443303_13443534_13455374_13455488_13458194_13458309_13463528_13463643_13464784_13464943_13465645_13465733_13482897_13483063_13491467_13491582_13491862_13491948_13503053_13503131_13503485_13503624_13519841_13520072_13524127_13524239_13532386_13532638_13533710_13534046_13563370_13563590_13568945_13569149_13570695_13570786_13584380_13584577_13608612_13608753_13610837_13610977_13616129_13616259_13633391
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036010	chr12	+	194	1	Intergenic	novelGene_1150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAATAATTTGCACAAAT	NA	False	NA	NA	False	NA	NA	NA	16163743	16163937	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_16163700_16163900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036025	chr12	-	5200	20	FSM	ENSMUSG00000020593.17	ENSMUST00000221230.2	4114	20	0	-1086	0	0	multi-exon	FALSE	canonical	3	46	junction_15	24.5031514734934	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGGCATATGAACTTTAAA	7239	False	NA	-22	True	AATAAA	-27	NA	16639774	16585954	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036027	chr12	-	5292	21	FSM	ENSMUSG00000020593.17	ENSMUST00000067124.6	5581	21	4	285	0	0	multi-exon	FALSE	canonical	3	67	junction_16	22.2780160696593	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGGCATATGAACTTTAAA	7246	False	NA	-22	True	AATAAA	-27	NA	16639767	16585954	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16621164_16621264_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036052	chr12	-	1875	7	FSM	ENSMUSG00000045679.15	ENSMUST00000054536.11	1928	7	53	0	2	0	multi-exon	FALSE	canonical	3	122	junction_2	25.4165300542777	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTAAGCTGTCATGAATT	NA	False	NA	1	True	AATAAA	-26	NA	17050066	17038648	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_17039897_17042278_17042321_17043453_17043575_17045614_17045673_17047634_17047705_17047774_17047858_17049813
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036060	chr12	+	175	1	Intergenic	novelGene_1151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAAATGTGACT	6839	False	NA	NA	False	NA	NA	NA	17040550	17040725	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_17040600_17040700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036069	chr12	+	2178	13	FSM	ENSMUSG00000020571.14	ENSMUST00000057288.7	2175	13	0	-3	0	3	multi-exon	FALSE	canonical	3	2590	junction_6	180.731134715509	897	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTGTGATTATCTTCTGA	NA	False	NA	NA	False	AATAAA	-15	NA	17316545	17334774	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036083	chr12	-	241	1	Intergenic	novelGene_1152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGCCTTTGAGGCTTT	2727	False	NA	NA	False	AAAAAG	-32	NA	17345669	17345428	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_17345400_17345700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036087	chr12	+	187	1	Intergenic	novelGene_1153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACAGAATTACATTAATG	1643	False	NA	NA	False	NA	NA	NA	17366587	17366774	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_17366600_17366800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036098	chr12	-	178	1	Intergenic	novelGene_1154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAATCTGTAACT	NA	False	NA	NA	False	NA	NA	NA	17586230	17586052	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_17586100_17586200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036106	chr12	+	2521	12	FSM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	105	-418	-73	-3	multi-exon	FALSE	canonical	3	389	junction_11	306.963561516955	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGTGTTGTAAATCTTT	NA	False	NA	20	True	AATAAA	-15	NA	17594899	17601503	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_17595170_17597096_17597195_17597283_17597402_17597633_17597808_17597950_17598124_17598309_17598445_17598545_17598628_17598787_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036113	chr12	+	2034	12	NNC	ENSMUSG00000011179.9	novel	2208	12	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	102	junction_2	469.236341092261	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGGGAATGTTTGCAAG	NA	False	NA	NA	False	AATAAA	-20	NA	17594965	17601085	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr12_+_17595170_17597096_17597195_17597286_17597402_17597633_17597808_17597950_17598124_17598309_17598445_17598545_17598628_17598787_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036121	chr12	-	176	1	Intergenic	novelGene_1155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAATATCTAATTTA	NA	False	NA	NA	False	NA	NA	NA	17652888	17652712	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_17652700_17652900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036122	chr12	+	178	1	Intergenic	novelGene_1156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCAGAGTGAGCAGGAAT	NA	False	NA	NA	False	NA	NA	NA	17681575	17681753	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_17681600_17681800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036129	chr12	+	1576	4	FSM	ENSMUSG00000071379.3	ENSMUST00000071858.5	1526	4	-52	2	-52	-2	multi-exon	FALSE	canonical	3	71	junction_1	8.52447456836295	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTGTGAGTTTCCTGT	8572	False	NA	15	True	AATAAA	-3	NA	17740804	17841932	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_17741048_17836147_17836550_17837545_17837652_17841107
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036140	chr12	+	2418	4	Fusion	ENSMUSG00000113294.2_ENSMUSG00000114025.2	novel	1214	3	NA	NA	-324	-507	intron_retention	FALSE	canonical	3	43	junction_1	46.5999523128035	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGGAGAGAAATTCTA	NA	False	NA	3	True	NA	NA	NA	17931873	17954169	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr12_+_17932324_17950660_17950788_17950987_17951049_17952389
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036152	chr12	+	2118	4	NNC	ENSMUSG00000114025.2	novel	1214	3	NA	NA	-10223	-500	intron_retention	FALSE	canonical	3	46	junction_1	45.4190366354119	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAAATTCTATGAATGT	NA	False	NA	10	True	NA	NA	NA	17942166	17954176	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr12_+_17942310_17950660_17950788_17950987_17951049_17952389
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036159	chr12	+	2134	4	NNC	ENSMUSG00000114025.2	novel	1214	3	NA	NA	-10197	-507	intron_retention	FALSE	canonical	3	10	junction_1	60.256857608814	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGGAGAGAAATTCTA	NA	False	NA	3	True	NA	NA	NA	17942192	17954169	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr12_+_17942310_17950611_17950788_17950987_17951049_17952389
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036166	chr12	+	2685	4	Genic_Genomic	ENSMUSG00000113402.2	novel	324	1	NA	NA	-264	18678	multi-exon	FALSE	canonical	3	19	junction_2	10.0332779621949	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGGAGAGAAACTCTA	NA	False	NA	NA	False	NA	NA	NA	18437491	18456757	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr12_+_18437954_18452998_18453126_18453327_18453389_18454722
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036172	chr12	+	191	1	Intergenic	novelGene_1157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAACAGGATGCTTAATA	NA	False	NA	NA	False	NA	NA	NA	18563587	18563778	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_18563600_18563800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036182	chr12	-	206	1	Intergenic	novelGene_1158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCAGTCAGAAAATGAAAAC	NA	False	NA	NA	False	NA	NA	NA	18906562	18906356	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_18906400_18906600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036209	chr12	+	204	1	Intergenic	novelGene_1159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATACCCTCTGGTCAAG	NA	False	NA	NA	False	NA	NA	NA	19483706	19483910	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_19483700_19483900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036234	chr12	+	196	1	Intergenic	novelGene_1160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCACATTGACATTCACC	NA	False	NA	NA	False	NA	NA	NA	20323549	20323745	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_20323500_20323700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036243	chr12	+	2495	4	Fusion	ENSMUSG00000116715.2_ENSMUSG00000116558.2	novel	883	3	NA	NA	-307	414	multi-exon	FALSE	canonical	2	4	junction_2	22.69116323349	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTACTGGAGAGAAACTCTA	NA	False	NA	NA	False	NA	NA	NA	20362208	20373210	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr12_+_20362642_20369605_20369733_20369934_20369996_20371336
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036251	chr12	+	2207	4	Fusion	ENSMUSG00000112951.3_ENSMUSG00000116606.2	novel	654	4	NA	NA	-300	1205	multi-exon	FALSE	canonical	3	59	junction_1	36.5543735033473	28	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCTCCATTATTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	20465637	20486623	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr12_+_20466065_20483306_20483434_20483635_20483697_20485031
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036255	chr12	+	3954	2	Fusion	ENSMUSG00000112951.3_ENSMUSG00000116537.2	novel	739	2	NA	NA	-300	2869	multi-exon	FALSE	canonical	3	27	junction_1	0	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTCTGTGAGTTTCTT	NA	False	NA	NA	False	AATAAA	-1	NA	20465637	20512081	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr12_+_20466065_20508554
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036266	chr12	+	193	1	Intergenic	novelGene_1161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAAGAATGCTGC	NA	False	NA	NA	False	NA	NA	NA	20776261	20776454	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_20776300_20776500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036278	chr12	+	193	1	Intergenic	novelGene_1162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATGGTCCCCTGACTTT	NA	False	NA	NA	False	NA	NA	NA	21144045	21144238	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_21144000_21144200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036285	chr12	+	5536	27	FSM	ENSMUSG00000052632.17	ENSMUST00000050990.10	3345	27	-199	-1992	-1	0	multi-exon	FALSE	canonical	3	55	junction_4	9.27784470482579	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTTCATCTGTAAAGTA	NA	False	NA	20	True	AATAAA	-16	NA	21161755	21320172	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_21162171_21218204_21218278_21235098_21235245_21249544_21249620_21250880_21250931_21253960_21254091_21256303_21256390_21262809_21262886_21263139_21263227_21267975_21268080_21268188_21268259_21274305_21274394_21279239_21279289_21279374_21279542_21280823_21280958_21289555_21289651_21294686_21294877_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21308010_21308177_21315131_21315182_21315463_21315535_21315888_21316012_21317718
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036332	chr12	-	242	1	Intergenic	novelGene_1163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGCATTTAGAAGCTTT	NA	False	NA	NA	False	TATAAA	-24	NA	21406355	21406113	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_21406100_21406400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036355	chr12	-	2211	5	FSM	ENSMUSG00000076432.14	ENSMUST00000103002.8	2110	5	-99	-2	53	2	multi-exon	FALSE	canonical	3	3292	junction_3	152.582764426393	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATGGCTTTGTAACAAT	NA	False	NA	NA	False	AATAAA	-22	NA	21467536	21440327	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036406	chr12	+	186	1	Intergenic	novelGene_1164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGTATAGCTGTGCCAG	NA	False	NA	NA	False	NA	NA	NA	23855688	23855874	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_23855700_23855900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036417	chr12	-	3075	4	Genic_Genomic	ENSMUSG00000112975.2	novel	126	1	NA	NA	-301	38557	multi-exon	FALSE	canonical	3	16	junction_2	4.08248290463863	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGGAGAGAAATCTATGA	NA	False	NA	NA	False	NA	NA	NA	24302483	24263499	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr12_-_24265960_24267293_24267355_24267554_24267682_24302056
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036424	chr12	+	1996	15	FSM	ENSMUSG00000059669.9	ENSMUST00000075954.9	2209	15	218	-5	-34	5	multi-exon	FALSE	canonical	3	207	junction_4	28.2355254592363	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAAACTTGCATTCATT	NA	False	NA	17	True	ATTAAA	-26	NA	24548575	24608543	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_24548649_24550434_24550534_24554945_24555034_24559082_24559181_24559452_24559549_24564783_24564935_24566857_24567009_24573100_24573201_24594269_24594418_24597011_24597190_24597568_24597616_24599417_24599509_24605988_24606060_24606517_24606741_24608161
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036441	chr12	+	4004	4	FSM	ENSMUSG00000020653.13	ENSMUST00000020982.7	4086	4	75	7	75	-7	multi-exon	FALSE	canonical	3	234	junction_3	19.258475767539	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGAGTGATGTGTTATA	NA	False	NA	11	True	TATAAA	-22	NA	24701347	24712781	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_24701566_24703557_24703810_24704841_24705776_24710181
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036448	chr12	+	2209	10	FSM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	-9	-7	-9	7	multi-exon	FALSE	canonical	3	5416	junction_9	442.930588436653	1420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTAAAATGTACATCTCTT	NA	False	NA	79	True	ATTAAA	-33	NA	24758230	24764152	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036475	chr12	+	2206	9	ISM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	43	49	43	-49	intron_retention	FALSE	canonical	3	5890	junction_1	365.159468588725	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCATGGCATACAAGTAT	NA	False	NA	23	True	AATAAA	-23	NA	24758282	24764096	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036481	chr12	+	193	1	Intergenic	novelGene_1165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGACAACCAAATCTCCA	NA	False	NA	NA	False	NA	NA	NA	24799712	24799905	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_24799700_24799900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036487	chr12	+	208	1	Intergenic	novelGene_1166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTAGTCCCATCTAGGG	NA	False	NA	NA	False	NA	NA	NA	24805821	24806029	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_24805800_24806000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036492	chr12	+	186	1	Intergenic	novelGene_1167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGGCAAGAATTTAAAAAAA	7854	False	NA	NA	False	NA	NA	NA	24839474	24839660	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_24839500_24839700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036494	chr12	+	175	1	Intergenic	novelGene_1168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTGCCACTTATCTATT	NA	False	NA	NA	False	NA	NA	NA	24854218	24854393	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_24854200_24854400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036511	chr12	+	178	1	Intergenic	novelGene_1169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGAAACCTGGGGTGC	NA	False	NA	NA	False	NA	NA	NA	24952071	24952249	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_24952100_24952200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036521	chr12	+	7054	29	NIC	ENSMUSG00000036333.12	novel	6277	30	NA	NA	3	-225	combination_of_known_junctions	FALSE	canonical	3	25	junction_5	8.28017055922134	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGACTCACGGAGTTTTA	NA	False	NA	4	True	AATAAA	-14	NA	25024930	25109471	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_25025062_25032235_25032377_25036902_25037002_25038530_25038630_25039736_25039836_25040674_25040774_25042208_25042308_25044810_25045009_25047230_25047330_25048704_25048804_25049259_25049359_25051571_25051750_25052987_25053153_25053942_25054123_25055051_25055218_25058057_25058210_25058401_25058692_25060070_25060212_25060893_25061138_25061498_25061588_25063295_25063441_25066888_25067052_25086452_25086632_25088322_25088550_25090454_25090569_25101093_25101226_25102795_25102895_25103796_25104034_25106580
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036534	chr12	+	193	1	Intergenic	novelGene_1170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGCTCATGCTTTGCTG	NA	False	NA	NA	False	NA	NA	NA	25071362	25071555	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_25071400_25071600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036539	chr12	-	5106	9	FSM	ENSMUSG00000020642.14	ENSMUST00000062149.6	4812	9	-57	-237	-19	-3	multi-exon	FALSE	canonical	3	23	junction_8	8.26041009877839	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCTGGCTCCATCTTT	8815	False	NA	-4	True	AATACA	-18	NA	26465272	26356795	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_26360789_26364018_26364109_26367647_26367796_26370950_26371159_26377276_26377338_26377501_26377607_26389304_26389451_26439392_26439575_26465099
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036564	chr12	+	1445	8	FSM	ENSMUSG00000020630.10	ENSMUST00000020959.9	1455	8	14	-4	-8	4	multi-exon	TRUE	canonical	3	155	junction_3	35.1318217284442	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTAGTTTGAGTTACTGT	NA	False	NA	17	True	AATAAA	-25	NA	28699614	28709592	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_28699816_28702023_28702140_28703061_28703224_28705583_28705684_28707270_28707326_28707631_28707717_28708169_28708295_28708991
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036574	chr12	+	1687	4	FSM	ENSMUSG00000020629.13	ENSMUST00000020957.13	1652	4	-35	0	-35	0	multi-exon	FALSE	canonical	3	316	junction_2	13.6950923894494	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTCTCTCGAGAGTTCT	NA	False	NA	15	True	NA	NA	NA	28725194	28732174	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_28725372_28727776_28727897_28729388_28729569_28730964
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036610	chr12	+	1711	9	FSM	ENSMUSG00000036613.9	ENSMUST00000221877.2	4091	9	9	2371	9	3	multi-exon	FALSE	canonical	3	234	junction_3	17.1641887370187	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTTTGTTTGTTTTTTC	1107	False	NA	10	True	NA	NA	NA	28801810	28917493	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_28802004_28810068_28810153_28816770_28816904_28878706_28878864_28897555_28897656_28909250_28909388_28912953_28913122_28914668_28914834_28916919
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036616	chr12	+	2955	5	FSM	ENSMUSG00000043061.11	ENSMUST00000057151.10	2971	5	20	-4	20	4	multi-exon	FALSE	canonical	3	167	junction_1	9.17877987534291	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTGTGCTTTCGTGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	30634444	30641218	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_30634562_30635468_30635590_30637198_30637254_30638472_30638567_30638650
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036645	chr12	+	1717	10	FSM	ENSMUSG00000020669.16	ENSMUST00000020997.15	1750	10	28	5	4	1	multi-exon	FALSE	canonical	3	40	junction_1	6.36153564813317	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGTACTTTGTGTTCAC	8067	False	NA	11	True	AATAAA	-19	NA	30961694	31010156	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_30962227_30972233_30972345_30974762_30974877_30976808_30976874_30989572_30989686_30990289_30990419_30991965_30992129_30992788_30992868_31008846_31008904_31009802
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036654	chr12	+	196	1	Intergenic	novelGene_1171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTTTAAGAATCACCAAC	NA	False	NA	NA	False	NA	NA	NA	31146209	31146405	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_31146200_31146400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036666	chr12	+	196	1	Intergenic	novelGene_1172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAGTAGTAAAAACA	NA	False	NA	NA	False	NA	NA	NA	31288523	31288719	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_31288500_31288700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036693	chr12	-	2256	14	FSM	ENSMUSG00000020664.11	ENSMUST00000110857.5	2544	14	3	285	3	-285	multi-exon	FALSE	canonical	3	710	junction_4	70.0417457938204	391	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGGTTATTCTGAGTG	NA	False	NA	-10	True	AATAAA	-18	NA	31401449	31381560	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464_31385656_31390278_31390381_31390862_31391007_31391376_31391478_31392742_31392813_31393373_31393443_31394821_31394902_31399595_31399675_31401299
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036698	chr12	+	192	1	Intergenic	novelGene_1173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACACCACAGAACTGAGT	NA	False	NA	NA	False	NA	NA	NA	31387346	31387538	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_31387300_31387500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036708	chr12	-	3846	6	FSM	ENSMUSG00000020659.17	ENSMUST00000101499.10	3900	6	54	0	-5	0	multi-exon	FALSE	canonical	3	107	junction_4	37.6542162313864	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCCTAGATGAGTCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	31549561	31534934	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544580_31544749_31549521
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036710	chr12	-	3829	6	FSM	ENSMUSG00000020659.17	ENSMUST00000064240.14	3937	6	1	107	1	0	multi-exon	FALSE	canonical	3	23	junction_4	65.6310901935965	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCCTAGATGAGTCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	31549553	31534934	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544589_31544749_31549521
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036727	chr12	-	1800	8	FSM	ENSMUSG00000020650.16	ENSMUST00000177962.9	6155	8	-29	4384	-6	10	multi-exon	FALSE	canonical	3	313	junction_3	46.0678293167714	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTTTTTATTCTCTAG	NA	False	NA	NA	False	TATAAA	-20	NA	31684663	31645349	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_31646377_31650642_31650744_31667073_31667180_31674113_31674250_31676724_31676876_31680791_31680893_31684261_31684380_31684603
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036734	chr12	-	1760	7	FSM	ENSMUSG00000020648.4	ENSMUST00000020977.4	1773	7	20	-7	0	7	multi-exon	FALSE	canonical	2	86	junction_6	14.7016627933336	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCGCCTGTAAGTTAAC	9080	False	NA	2	True	AATAAA	-24	NA	31704805	31690041	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_31690944_31691500_31691728_31692762_31692886_31696619_31696738_31698764_31698887_31702289_31702441_31704688
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036746	chr12	+	5811	22	ISM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	8	8563	8	-2	5prime_fragment	FALSE	canonical	3	60	junction_7	21.3659402170966	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCAGTGCAAGCCAAGTA	NA	False	NA	9	True	AATAAA	-15	NA	31704875	31979066	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036758	chr12	+	202	1	Intergenic	novelGene_1174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATTACTGCTTAAGACT	NA	False	NA	NA	False	NA	NA	NA	31745927	31746129	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_31745900_31746100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036769	chr12	+	202	1	Intergenic	novelGene_1175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTACATGGAGCAAGTA	NA	False	NA	NA	False	NA	NA	NA	31801737	31801939	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_31801700_31801900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036777	chr12	+	178	1	Intergenic	novelGene_1176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGCCATAATGCTT	NA	False	NA	NA	False	NA	NA	NA	31839315	31839493	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_31839300_31839500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036780	chr12	+	231	1	Intergenic	novelGene_1177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAAGCGTGGAAGGGCAC	NA	False	NA	NA	False	AAAAAG	-28	NA	31850672	31850903	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_31850700_31850900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036785	chr12	-	226	1	Intergenic	novelGene_1178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATACATATTCATTCAT	NA	False	NA	NA	False	NA	NA	NA	31861271	31861045	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_31861000_31861300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036789	chr12	-	2770	11	FSM	ENSMUSG00000002996.18	ENSMUST00000172314.9	3142	11	179	193	-122	-193	multi-exon	FALSE	canonical	3	134	junction_10	30.1004983347452	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGTTGACTGAATTCA	NA	False	NA	1	True	AATAAA	-25	NA	32000355	31976445	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_31977507_31978582_31978725_31980680_31981005_31983355_31983501_31984283_31984441_31986970_31987084_31987168_31987281_31987616_31987759_31990276_31990506_31993827_31994012_32000194
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036802	chr12	-	3390	11	FSM	ENSMUSG00000002997.16	ENSMUST00000036497.16	3378	11	-12	0	-12	0	multi-exon	FALSE	canonical	2	12	junction_4	4.56508488420533	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTCCAAGCATGGTTTTCT	NA	False	NA	NA	False	AATAAA	-19	NA	32111307	32008474	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_32010522_32012997_32013137_32013896_32013963_32015113_32015189_32017211_32017314_32022048_32022203_32025917_32026025_32037878_32037963_32043729_32043783_32088620_32088657_32110780
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036810	chr12	+	4575	11	FSM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	-26	-22	-26	22	multi-exon	FALSE	canonical	3	823	junction_5	70.9532240282286	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTGTGTGTATCAGAT	NA	False	NA	15	True	AATAAA	-40	NA	32870307	32903370	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_32870626_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036823	chr12	+	2099	11	NIC	ENSMUSG00000020572.9	novel	411	4	NA	NA	-4	-2249	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	257.16743573011	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTGTGGTGTTGTACA	NA	False	NA	14	True	AATAAA	-17	NA	32870795	32901099	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_32870909_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036848	chr12	+	6231	26	FSM	ENSMUSG00000020590.17	ENSMUST00000048519.17	6231	26	1	-1	1	1	multi-exon	TRUE	canonical	3	72	junction_14	10.0218960281975	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGTGTTTACTTGGCAG	NA	False	NA	NA	False	AATAAA	-17	NA	35097185	35197479	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036860	chr12	-	5544	11	FSM	ENSMUSG00000019256.18	ENSMUST00000116436.9	5548	11	4	0	4	0	multi-exon	FALSE	canonical	3	35	junction_9	5.59016994374947	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTTTTCATGCAAGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	35585033	35547972	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_35550700_35553711_35554976_35556243_35556386_35557418_35557529_35558128_35558332_35559964_35560096_35561057_35561170_35562857_35562948_35565019_35565124_35576679_35576868_35584560
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036871	chr12	+	194	1	Intergenic	novelGene_1179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGATTTGGGAATAACT	NA	False	NA	NA	False	NA	NA	NA	36064190	36064384	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_36064200_36064400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036880	chr12	-	1983	6	FSM	ENSMUSG00000020577.18	ENSMUST00000020896.17	1932	6	-49	-2	-38	2	multi-exon	FALSE	canonical	3	804	junction_3	64.3913037606787	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGGTGTTTAAATCAAAG	NA	False	NA	-2	True	AATAAA	-22	NA	36092537	36064553	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_36065772_36070488_36070603_36071799_36071914_36072751_36072833_36073903_36074072_36092249
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036885	chr12	+	179	1	Intergenic	novelGene_1180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	36104297	36104476	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_36104300_36104500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036894	chr12	-	1892	12	FSM	ENSMUSG00000020547.6	ENSMUST00000020856.6	1871	12	-17	-4	-17	4	multi-exon	FALSE	canonical	3	931	junction_9	81.950499068161	336	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTCAGAGCGTGTTTTA	NA	False	NA	-7	True	AATAAA	-25	NA	36206841	36141829	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_36142309_36142965_36143089_36154260_36154400_36157494_36157642_36159703_36159875_36163966_36164077_36168985_36169122_36170717_36170784_36173933_36174038_36179990_36180168_36184889_36184955_36206666
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036908	chr12	+	2446	10	FSM	ENSMUSG00000036188.5	ENSMUST00000041640.5	2456	10	10	0	10	0	multi-exon	FALSE	canonical	3	149	junction_5	20.5882622678524	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGTTTCATAATTCGT	NA	False	NA	21	True	AATAAA	-20	NA	36207122	36247290	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_36207423_36215868_36215934_36220447_36220587_36226578_36226678_36232346_36232508_36236724_36236940_36237648_36237785_36243668_36243798_36244982_36245113_36246218
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036922	chr12	+	218	1	Intergenic	novelGene_1181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTTTTAAACAGGACAGAT	3556	False	NA	NA	False	NA	NA	NA	37112223	37112441	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_37112200_37112400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036923	chr12	-	3657	2	FSM	ENSMUSG00000047446.19	ENSMUST00000146905.2	3710	2	53	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGCGTTAGACTATCAT	NA	False	NA	0	True	AATAAA	-16	NA	40087375	40083289	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_40086833_40087261
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036924	chr12	-	3717	2	FSM	ENSMUSG00000047446.19	ENSMUST00000101472.4	1200	2	14	-2531	14	0	multi-exon	FALSE	canonical	3	220	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGCGTTAGACTATCAT	NA	False	NA	0	True	AATAAA	-16	NA	40088010	40083289	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_40086833_40087836
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036940	chr12	-	1844	12	FSM	ENSMUSG00000001627.13	ENSMUST00000001672.12	3378	12	-28	1562	-28	2	multi-exon	FALSE	canonical	3	551	junction_11	48.4295518005619	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGTAGTGAGCAGATG	NA	False	NA	-1	True	AATAAA	-23	NA	40273216	40253127	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036954	chr12	-	1579	12	FSM	ENSMUSG00000055917.16	ENSMUST00000069637.15	2188	12	109	500	-19	-500	multi-exon	FALSE	canonical	3	359	junction_6	45.6703965821071	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTTTGTCATTATCTTG	NA	False	NA	NA	False	AATAAA	-28	NA	40495792	40365544	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40370698_40372528_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40495664
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036964	chr12	-	230	1	Intergenic	novelGene_1182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACGACAATAACATATAGC	NA	False	NA	NA	False	AAAAAG	-32	NA	40629483	40629253	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_40629300_40629500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036977	chr12	-	1870	3	FSM	ENSMUSG00000014905.5	ENSMUST00000015049.5	2461	3	255	336	-3	-336	multi-exon	FALSE	canonical	3	92	junction_1	7	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCAGTGTTGTCATTTTA	NA	False	NA	NA	False	TATAAA	-15	NA	44256854	44252677	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_44254189_44254869_44255097_44256722
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000036989	chr12	+	3472	10	FSM	ENSMUSG00000036257.16	ENSMUST00000043082.16	13507	10	0	10035	0	4	multi-exon	FALSE	canonical	3	204	junction_3	27.4419701988589	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGGTGTATATCCTTTGC	NA	False	NA	NA	False	NA	NA	NA	44315930	44359280	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_44316085_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354898_44358107
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037001	chr12	+	198	1	Intergenic	novelGene_1183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAGGTAATAAATCCATT	1933	False	NA	NA	False	NA	NA	NA	47814937	47815135	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_47814900_47815100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037009	chr12	+	192	1	Intergenic	novelGene_1184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAATTTCTAATGAT	NA	False	NA	NA	False	NA	NA	NA	50873572	50873764	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_50873600_50873800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037019	chr12	+	185	1	Intergenic	novelGene_1185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAAATGCTACAAGTATT	NA	False	NA	NA	False	NA	NA	NA	51346272	51346457	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_51346300_51346500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037021	chr12	+	193	1	Intergenic	novelGene_1186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAGCAGGCTACAGTGAT	NA	False	NA	NA	False	NA	NA	NA	51375357	51375550	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_51375400_51375600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037055	chr12	-	4229	18	FSM	ENSMUSG00000020954.17	ENSMUST00000013130.15	3046	18	-170	-1013	-160	1013	multi-exon	FALSE	canonical	3	65	junction_9	90.4848149144585	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTCTTGGCCACATTA	NA	False	NA	-1	True	AATAAA	-21	NA	51738840	51655401	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51680361_51680503_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037063	chr12	-	3844	16	FSM	ENSMUSG00000020954.17	ENSMUST00000169503.4	2791	16	-27	-1026	-27	1013	multi-exon	FALSE	canonical	3	154	junction_9	54.1091078798713	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTCTTGGCCACATTA	NA	False	NA	-1	True	AATAAA	-21	NA	51738707	51655401	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037065	chr12	-	3928	17	NIC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	0	1013	combination_of_known_splicesites	FALSE	canonical	3	58	junction_9	80.2484423524843	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTCTTGGCCACATTA	NA	False	NA	-1	True	AATAAA	-21	NA	51738680	51655401	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037078	chr12	+	198	1	Intergenic	novelGene_1187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGGCTCATCTTAAAAAAA	6487	False	NA	NA	False	NA	NA	NA	51699132	51699330	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_51699100_51699300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037082	chr12	+	189	1	Intergenic	novelGene_1188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACCTGATCCTTTCAAAG	NA	False	NA	NA	False	NA	NA	NA	51728185	51728374	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_51728200_51728400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037089	chr12	+	187	1	Intergenic	novelGene_1189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAACTTGAAATCTACAGAG	NA	False	NA	NA	False	NA	NA	NA	51732098	51732285	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_51732100_51732300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037113	chr12	-	209	1	Intergenic	novelGene_1190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCCTGGAGATGTGTGG	7978	False	NA	NA	False	NA	NA	NA	51986114	51985905	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_51985900_51986100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037121	chr12	+	236	1	Intergenic	novelGene_1191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTAAAGCCTTGGGTAG	NA	False	NA	NA	False	AAAACA	-31	NA	52020386	52020622	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_52020400_52020600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037124	chr12	-	1177	3	FSM	ENSMUSG00000020956.15	ENSMUST00000021339.8	2564	3	-6	1393	-6	-1393	multi-exon	FALSE	canonical	3	170	junction_1	5	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGTTTTTCTTAAAGCC	NA	False	NA	3	True	AATAAA	-20	NA	52053290	52045682	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_52046657_52051661_52051732_52053157
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037139	chr12	+	1189	11	FSM	ENSMUSG00000035142.19	ENSMUST00000040090.16	2987	11	13	1785	-6	-1785	multi-exon	FALSE	canonical	3	215	junction_4	16.265300489078	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGCTCTATGATGATTC	NA	False	NA	10	True	AATAAA	-19	NA	52144532	52357742	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_52144675_52145135_52145284_52147249_52147285_52190751_52190843_52227874_52227915_52227999_52228091_52317821_52317916_52333120_52333207_52349463_52349585_52352580_52352664_52357484
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037150	chr12	+	7049	7	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	-19	819	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_1	83.7842798832547	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTACACTGACTTGTG	NA	False	NA	9	True	ATTAAA	-18	NA	52550779	52616437	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr12_+_52550832_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037170	chr12	+	176	1	Intergenic	novelGene_1192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGGTTTTTCGAGACA	NA	False	NA	NA	False	NA	NA	NA	52633470	52633646	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_52633500_52633600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037178	chr12	+	186	1	Intergenic	novelGene_1193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCATGTTATCTACAGAA	NA	False	NA	NA	False	NA	NA	NA	52642663	52642849	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_52642700_52642800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037179	chr12	+	196	1	Intergenic	novelGene_1194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCATTTGCTTTCCTGA	NA	False	NA	NA	False	NA	NA	NA	52771209	52771405	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_52771200_52771400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037192	chr12	-	175	1	Intergenic	novelGene_1195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAGGACAAACATGTG	1335	False	NA	NA	False	NA	NA	NA	54458140	54457965	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_54458000_54458100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037200	chr12	+	184	1	Intergenic	novelGene_1196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAGTGTCATTAAC	NA	False	NA	NA	False	NA	NA	NA	54688551	54688735	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_54688600_54688700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037202	chr12	-	1331	2	FSM	ENSMUSG00000044408.8	ENSMUST00000056228.8	1346	2	15	0	15	0	multi-exon	FALSE	canonical	3	293	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCTCTTTTATGGTTAA	NA	False	NA	NA	False	ATTAAA	-17	NA	54703343	54692176	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_54693321_54703156
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037210	chr12	-	2298	6	FSM	ENSMUSG00000054302.16	ENSMUST00000161592.8	4186	6	3	1885	3	-570	multi-exon	FALSE	canonical	3	353	junction_3	29.9973332148043	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGCCTTTGGGTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	54742663	54719009	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_54720636_54725294_54725409_54732644_54732757_54738784_54738881_54739559_54739742_54742495
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037222	chr12	-	190	1	Intergenic	novelGene_1197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTCATCACCAGTCCAGT	NA	False	NA	NA	False	NA	NA	NA	54747730	54747540	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_54747500_54747700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037231	chr12	+	231	1	Intergenic	novelGene_1198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTTCCTCAAAATTTC	NA	False	NA	NA	False	NA	NA	NA	54771207	54771438	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_54771200_54771400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037238	chr12	-	2838	14	FSM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	20	-930	4	930	multi-exon	FALSE	canonical	3	824	junction_2	126.191832929968	211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAGGTGTGTAATAGCC	NA	False	NA	3	True	NA	NA	NA	54842468	54792203	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842287_54842432
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037259	chr12	+	188	1	Intergenic	novelGene_1199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGAAAGAAGCTGTCACG	NA	False	NA	NA	False	NA	NA	NA	54852002	54852190	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_54852000_54852200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037261	chr12	-	229	1	Intergenic	novelGene_1200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTGGGACCCCATCTG	5566	False	NA	NA	False	NA	NA	NA	54861635	54861406	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_54861400_54861600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037269	chr12	-	2977	4	FSM	ENSMUSG00000062929.9	ENSMUST00000078124.8	2940	4	-29	-8	-29	0	multi-exon	FALSE	canonical	3	200	junction_2	55.9603033904888	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGAGATGTGTTTACT	NA	False	NA	-3	True	AATAAA	-20	NA	54909691	54905593	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_54908023_54908121_54908199_54908310_54908619_54909528
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037288	chr12	-	4669	21	NNC	ENSMUSG00000035021.14	novel	5788	27	NA	NA	6370	0	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_20	9.86711710683521	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGAATTCTGAAGTT	1905	False	NA	-8	True	AATAAA	-18	NA	54984467	54940335	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr12_-_54941287_54941742_54941831_54942814_54942958_54945122_54945584_54946784_54947012_54947095_54947344_54955783_54955933_54958094_54958247_54959361_54959526_54963252_54963853_54965222_54965348_54967822_54967931_54969227_54969394_54969824_54970050_54970169_54970266_54974348_54974496_54976311_54976451_54977036_54977133_54981524_54981692_54982266_54982367_54984350
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037298	chr12	+	186	1	Intergenic	novelGene_1201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAATTAAGGAACATCA	NA	False	NA	NA	False	NA	NA	NA	55026506	55026692	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_55026500_55026700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037303	chr12	+	201	1	Intergenic	novelGene_1202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAGAAGTACTTTTAAGA	NA	False	NA	NA	False	AAGAAA	-4	NA	55074622	55074823	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_55074600_55074800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037325	chr12	+	182	1	Intergenic	novelGene_1203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAAGTACTATTT	NA	False	NA	NA	False	NA	NA	NA	55111448	55111630	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_55111400_55111600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037330	chr12	-	222	1	Intergenic	novelGene_1204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGAAACAACTTAGATAAATG	NA	False	NA	NA	False	NA	NA	NA	55121028	55120806	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_55120800_55121000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037350	chr12	+	1390	5	FSM	ENSMUSG00000095595.3	ENSMUST00000177768.3	3922	5	22	2510	22	-2510	multi-exon	FALSE	canonical	3	88	junction_4	12.794041581924	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTGGATTTCCTTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	55171275	55186379	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_55171508_55177400_55177575_55182452_55182520_55183902_55184001_55185560
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037355	chr12	+	204	1	Genic_Genomic	ENSMUSG00000095595.3	novel	NA	NA	NA	NA	17436	4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGCAGAGTTCTCGTTG	NA	False	NA	NA	False	NA	NA	NA	55188689	55188893	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr12_+_55188700_55188900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037382	chr12	+	2478	16	Fusion	ENSMUSG00000079108.7_ENSMUSG00000112368.2	novel	3642	16	NA	NA	270	614	multi-exon	FALSE	canonical	3	11	junction_15	308.573376831004	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCACTGTGGATTTCCTT	NA	False	NA	NA	False	AATAAA	-13	NA	55277222	55326113	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr12_+_55277430_55286078_55286189_55287044_55287137_55288157_55288243_55292723_55292829_55294017_55294085_55294164_55294223_55296788_55296940_55298428_55298578_55298911_55299013_55299556_55299644_55302323_55302398_55302752_55302862_55304209_55304381_55307187_55307284_55325297
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037390	chr12	+	200	1	Intergenic	novelGene_1205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTACCTTAAGTATTTG	NA	False	NA	NA	False	NA	NA	NA	55297116	55297316	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_55297100_55297300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037417	chr12	+	206	1	Intergenic	novelGene_1206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGTGAAGTCCTGGAC	NA	False	NA	NA	False	NA	NA	NA	55359917	55360123	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_55359900_55360100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037425	chr12	+	1002	7	FSM	ENSMUSG00000021024.15	ENSMUST00000021412.9	1042	7	45	-5	25	5	multi-exon	FALSE	canonical	3	2423	junction_5	124.008960249743	327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCATCCTGTCTTTCTTGA	NA	False	NA	21	True	AATAAA	-22	NA	55445604	55465244	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_55445777_55454253_55454349_55454786_55454869_55456911_55457068_55458971_55459151_55461188_55461284_55465021
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037435	chr12	-	1529	6	FSM	ENSMUSG00000021025.9	ENSMUST00000021413.9	1578	6	49	0	49	0	multi-exon	FALSE	canonical	3	201	junction_5	20.9914268214431	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTGTCCCGCTCGTTTGC	NA	False	NA	-2	True	ATTAAA	-17	NA	55539383	55536194	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_55536755_55537190_55537452_55537555_55537645_55537904_55538116_55538454_55538564_55539084
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037439	chr12	-	7904	41	FSM	ENSMUSG00000021027.18	ENSMUST00000085385.7	7901	41	-3	0	-3	0	multi-exon	FALSE	canonical	1	23	junction_22	22.9185514376454	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCCATGATCGTAT	9944	False	NA	-10	True	AATAAA	-25	NA	55867955	55649683	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_55651054_55658857_55658889_55659418_55659544_55687368_55687497_55689109_55689269_55705832_55705989_55712337_55712462_55720237_55720310_55723188_55724051_55730691_55730876_55731271_55731407_55736543_55736613_55740139_55740251_55741931_55742041_55744623_55744683_55745546_55745673_55749219_55749349_55754737_55754894_55755778_55755878_55756298_55756493_55759418_55759572_55763746_55763924_55764877_55765095_55766368_55766494_55769558_55769727_55784995_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207_55834252_55837096_55837155_55841779_55841830_55842450_55842562_55867446
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037450	chr12	+	194	1	Intergenic	novelGene_1207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACATAGTACATTTTAC	NA	False	NA	NA	False	NA	NA	NA	55820196	55820390	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_55820200_55820400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037456	chr12	+	186	1	Intergenic	novelGene_1208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTCACTTTATAAAA	4954	False	NA	NA	False	NA	NA	NA	55841340	55841526	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_55841300_55841500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037463	chr12	-	1491	9	FSM	ENSMUSG00000021028.9	ENSMUST00000021416.9	1512	9	14	7	14	-7	multi-exon	FALSE	canonical	3	215	junction_1	38.7193427113633	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTTTTTCATGTCTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	56392665	56375094	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_56375585_56377013_56377053_56382582_56382681_56384087_56384241_56384548_56384615_56386985_56387083_56387169_56387389_56389020_56389141_56392456
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037477	chr12	+	4008	2	FSM	ENSMUSG00000079104.5	ENSMUST00000139049.2	1720	2	3	-2291	3	2291	multi-exon	FALSE	canonical	3	317	junction_1	0	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTGTTTGCTAATTA	NA	False	NA	21	True	ATTAAA	-25	NA	57277200	57288959	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_57277398_57285148
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037503	chr12	-	4109	20	FSM	ENSMUSG00000020986.14	ENSMUST00000021375.12	4109	20	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_10	53.3728846882441	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCAGCTATGCTGAAGA	2678	False	NA	-27	True	NA	NA	NA	59058803	59005168	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037517	chr12	+	193	1	Intergenic	novelGene_1209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGATTCCCATTTTACCA	NA	False	NA	NA	False	NA	NA	NA	59030535	59030728	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_59030500_59030700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037524	chr12	+	1530	10	FSM	ENSMUSG00000060121.16	ENSMUST00000021379.8	1588	10	-8	66	-8	5	multi-exon	FALSE	canonical	1	279	junction_3	161.403565980158	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGATGAAATGGCAAATC	NA	False	NA	NA	False	AATAAA	-32	NA	59060170	59075190	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037539	chr12	+	209	1	Intergenic	novelGene_1210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTTAATATTCTTAACA	99	False	NA	NA	False	NA	NA	NA	59070353	59070562	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_59070400_59070600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037546	chr12	-	193	1	Intergenic	novelGene_1211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCACTGACTGATCTTCAA	8385	False	NA	3	True	NA	NA	NA	59086189	59085996	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_59086000_59086200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037553	chr12	-	1220	6	FSM	ENSMUSG00000020993.10	ENSMUST00000021380.10	1255	6	0	35	0	1	multi-exon	FALSE	canonical	3	266	junction_5	16.4146276229466	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAAAGTTTATTTTAATA	NA	False	NA	-4	True	NA	NA	NA	59108247	59089912	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_59090463_59091038_59091133_59094908_59094993_59097053_59097172_59098426_59098495_59107941
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037561	chr12	+	176	1	Intergenic	novelGene_1212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAATACTATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	59094511	59094687	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_59094500_59094700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037584	chr12	+	2800	23	FSM	ENSMUSG00000021000.18	ENSMUST00000170992.9	2785	23	-12	-3	-12	0	multi-exon	FALSE	canonical	3	90	junction_4	87.8376248945031	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTGTTTGGTATTAATAA	NA	False	NA	10	True	AATAAA	-18	NA	59178226	59236962	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037600	chr12	+	2699	23	FSM	ENSMUSG00000021000.18	ENSMUST00000177162.8	2728	23	-17	46	4	0	multi-exon	FALSE	canonical	1	5	junction_18	104.581584665942	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTGTTTGGTATTAATAA	NA	False	NA	10	True	AATAAA	-18	NA	59178270	59236962	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037603	chr12	-	3736	4	FSM	ENSMUSG00000035329.8	ENSMUST00000043204.8	3688	4	-48	0	-48	0	multi-exon	FALSE	canonical	3	48	junction_1	0.942809041582063	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGTGATGAATTTTATT	NA	False	NA	-11	True	AATAAA	-15	NA	59266559	59247440	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_59249466_59251096_59251783_59252766_59252878_59265645
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037610	chr12	-	181	1	Intergenic	novelGene_1213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAACAGAAAAGCTT	NA	False	NA	NA	False	NA	NA	NA	59310877	59310696	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_59310700_59310900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037642	chr12	+	3172	17	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	2	4	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	147.664950140512	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGATGAATTCATTTGG	7510	False	NA	24	True	AATAAA	-21	NA	65083109	65108934	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090386_65090488_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037643	chr12	+	3456	15	FSM	ENSMUSG00000035597.20	ENSMUST00000220798.2	3457	15	2	-1	2	0	multi-exon	TRUE	canonical	3	88	junction_9	125.885678620058	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTGTTGATGAATTCAT	7510	False	NA	20	True	AATAAA	-17	NA	65083109	65108930	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_65083243_65089234_65089582_65090005_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037647	chr12	+	2940	15	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	2	4	combination_of_known_junctions	FALSE	canonical	3	88	junction_9	116.631658984819	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGATGAATTCATTTGG	7510	False	NA	24	True	AATAAA	-21	NA	65083109	65108934	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037649	chr12	+	4298	16	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	137.107192452556	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCCTGTGGTCTCCTTC	7510	False	NA	8	True	AATAAA	-16	NA	65083109	65110160	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090386_65090488_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037654	chr12	+	4066	14	FSM	ENSMUSG00000035597.20	ENSMUST00000120580.8	4069	14	3	0	2	0	multi-exon	FALSE	canonical	3	174	junction_3	84.525476709793	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCCTGTGGTCTCCTTC	7510	False	NA	8	True	AATAAA	-16	NA	65083109	65110160	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_65083243_65089234_65089582_65090005_65090132_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037675	chr12	-	981	7	NNC	ENSMUSG00000020949.10	novel	981	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	3801.15651991455	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGTGTTCTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	65120736	65109197	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115771_65115884_65116724_65116827_65120588
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037677	chr12	-	1003	7	FSM	ENSMUSG00000020949.10	ENSMUST00000021332.10	1022	7	19	0	19	0	multi-exon	FALSE	canonical	3	9641	junction_1	417.22073161444	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGTGTTCTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	65120762	65109197	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116724_65116827_65120588
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037709	chr12	+	873	4	NNC	ENSMUSG00000055884.9	novel	1682	7	NA	NA	1	-6654	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_3	59.9462722406953	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGATTAAAAAGCAAAAGGA	9281	False	NA	NA	False	NA	NA	NA	65122377	65134204	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr12_+_65122952_65123815_65123989_65129805_65129884_65134156
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037714	chr12	-	4069	14	FSM	ENSMUSG00000047534.18	ENSMUST00000052201.9	4017	14	-48	-4	-24	4	multi-exon	FALSE	canonical	3	216	junction_12	54.2140181439599	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCTGGGTTTGTTGTTT	NA	False	NA	-1	True	AATAAA	-22	NA	65219402	65179503	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037719	chr12	-	3402	13	NIC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	9	2	combination_of_known_junctions	FALSE	canonical	3	78	junction_12	86.8969296862029	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTCTGGGTTTGTTGT	NA	False	NA	-3	True	AATAAA	-20	NA	65219363	65179505	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65219222
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037729	chr12	-	3160	13	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_12	101.824467699184	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTGGGTTTGTT	NA	False	NA	-5	True	AATAAA	-18	NA	65219353	65179507	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205406_65219222
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037748	chr12	+	226	1	Intergenic	novelGene_1214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAATATTTATTTAC	NA	False	NA	NA	False	TTTAAA	-1	NA	66818561	66818787	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_66818600_66818800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037754	chr12	+	664	1	FSM	ENSMUSG00000113948.2	ENSMUST00000221295.2	556	1	-36	-72	-36	72	mono-exon	FALSE	NA	NA	NA	NA	NA	388	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATATATATTTCAATAAT	NA	False	NA	NA	False	NA	NA	NA	67557493	67558157	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_67557500_67558200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037764	chr12	+	5341	1	Intergenic	novelGene_1215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	329	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTGGCTACATTTCTT	NA	False	NA	NA	False	NA	NA	NA	68604936	68610277	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_68604900_68610300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037774	chr12	+	4559	2	Intergenic	novelGene_1216	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGGCTACATTT	NA	False	NA	NA	False	NA	NA	NA	68605039	68610274	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_68609385_68610060
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037786	chr12	+	183	1	Intergenic	novelGene_1217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGGAAAGGAAAGGAAA	356	False	NA	NA	False	NA	NA	NA	69123336	69123519	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_69123300_69123500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037791	chr12	-	368	3	FSM	ENSMUSG00000034892.9	ENSMUST00000037023.9	390	3	22	0	22	0	multi-exon	FALSE	canonical	3	25458	junction_2	210	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGTGTGTGTTTTGT	NA	False	NA	-10	True	AATAAA	-18	NA	69205938	69204495	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_69204596_69205434_69205535_69205770
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037801	chr12	+	215	1	Intergenic	novelGene_1218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGGTTTGAGTGTACACA	NA	False	NA	NA	False	AATAGA	-5	NA	69207681	69207896	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_69207700_69207900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037807	chr12	+	1495	4	FSM	ENSMUSG00000034883.10	ENSMUST00000110621.3	1500	4	7	-2	0	2	multi-exon	FALSE	canonical	3	105	junction_3	15.6276108929747	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGTCTCAGCAGTTAAG	NA	False	NA	11	True	ATTAAA	-25	NA	69215594	69225785	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_69215837_69218635_69218735_69221165_69221888_69225353
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037817	chr12	-	515	2	FSM	ENSMUSG00000049751.7	ENSMUST00000054544.7	526	2	18	-7	18	-3	multi-exon	FALSE	canonical	3	5332	junction_1	0	644	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGTTTTGATTCTCA	NA	False	NA	-1	True	AATAAA	-21	NA	69230839	69229507	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_69229940_69230756
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037843	chr12	-	2093	3	FSM	ENSMUSG00000020973.8	ENSMUST00000021356.6	3390	3	1284	13	1284	-13	multi-exon	FALSE	canonical	3	240	junction_2	19	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTGAGTTAACGTTTGT	NA	False	NA	-21	True	AATAAA	-3	NA	69243919	69235873	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_69237169_69239581_69239726_69243265
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037860	chr12	+	186	1	Intergenic	novelGene_1219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAATGAGATGGGTACAC	NA	False	NA	NA	False	NA	NA	NA	69273479	69273665	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_69273500_69273700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037863	chr12	-	185	1	Intergenic	novelGene_1220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTTAAACATTTTTAAAAA	6024	False	NA	NA	False	NA	NA	NA	69316271	69316086	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_69316100_69316300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037876	chr12	-	3967	33	FSM	ENSMUSG00000020982.10	ENSMUST00000021368.10	4732	33	-17	782	-17	264	multi-exon	TRUE	canonical	3	259	junction_6	33.0300526036517	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGGCTCAAGTATCTTG	NA	False	NA	NA	False	NA	NA	NA	69403956	69358077	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037886	chr12	+	185	1	Intergenic	novelGene_1221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTTAGCCTCATGATAG	NA	False	NA	NA	False	AAGAAA	-10	NA	69394540	69394725	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_69394500_69394700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037889	chr12	+	205	1	Intergenic	novelGene_1222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGTAAGACTGCTGTTC	NA	False	NA	NA	False	NA	NA	NA	69397259	69397464	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_69397300_69397500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037892	chr12	+	3832	2	FSM	ENSMUSG00000044147.9	ENSMUST00000050063.9	1534	2	-101	-2197	-101	2197	multi-exon	FALSE	canonical	3	1327	junction_1	0	282	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTGGTTATGTTACTT	NA	False	NA	14	True	AATAAA	-17	NA	69418822	69422754	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_69418998_69419097
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037921	chr12	+	194	1	Intergenic	novelGene_1223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGAGAAAGGGCAGGG	NA	False	NA	NA	False	NA	NA	NA	69710592	69710786	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_69710600_69710800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037931	chr12	-	3353	10	FSM	ENSMUSG00000020988.10	ENSMUST00000021370.10	3340	10	-13	0	-13	0	multi-exon	FALSE	canonical	3	420	junction_5	64.6821287356699	358	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTTATGATCATATT	NA	False	NA	0	True	AATAAA	-34	NA	69771660	69737206	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69752538_69752574_69753897_69754061_69759395_69759528_69768085_69768238_69768851_69768968_69771427
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037966	chr12	+	189	1	Intergenic	novelGene_1224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCAAGTGTCTTTGACTT	1142	False	NA	NA	False	NA	NA	NA	69844824	69845013	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_69844800_69845000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000037982	chr12	+	221	1	Intergenic	novelGene_1225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATCAGAGGATAAACTATA	NA	False	NA	NA	False	AATAAA	-13	NA	69978026	69978247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_69978000_69978200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038009	chr12	+	2789	8	FSM	ENSMUSG00000021072.13	ENSMUST00000021471.13	2795	8	6	0	6	0	multi-exon	FALSE	canonical	3	450	junction_7	45.1044140108849	335	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTGGTGTTCTCATAAG	NA	False	NA	13	True	ATTAAA	-16	NA	70499874	70514814	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_70500095_70502785_70502902_70503354_70503401_70505552_70505682_70507118_70507165_70507252_70507355_70511173_70511241_70512751
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038022	chr12	+	4703	14	NIC	ENSMUSG00000048285.10	novel	4662	14	NA	NA	-65	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	34.6862522431374	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCTCTTGTTATTATAC	722	False	NA	NA	False	AATAAA	-21	NA	70872222	70949008	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_70872348_70910650_70910917_70919264_70919356_70923933_70924014_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70940380_70940717_70941650_70941783_70944115_70944208_70946157
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038036	chr12	+	174	1	ISM	ENSMUSG00000113707.2	ENSMUST00000222619.2	1906	2	2052	1	2052	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAGAAACCTGTTC	NA	False	NA	NA	False	NA	NA	NA	70961084	70961258	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr12_+_70961100_70961300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038038	chr12	+	1575	13	FSM	ENSMUSG00000021076.7	ENSMUST00000021479.6	4022	13	15	2432	15	225	multi-exon	FALSE	canonical	3	306	junction_4	23.8006769278149	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTAGTTTATTATGTA	9660	False	NA	10	True	AATAAA	-19	NA	70984645	71009060	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_70984806_70987571_70987645_70989032_70989116_70990182_70990292_70994225_70994334_70996477_70996546_70999723_70999804_71001392_71001429_71003046_71003127_71003373_71003448_71004805_71004888_71006614_71006817_71008640
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038049	chr12	-	170	1	Intergenic	novelGene_1226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCCTTTATTTGAAAACT	5404	False	NA	NA	False	NA	NA	NA	71003853	71003683	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_71003700_71003900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038056	chr12	+	2361	11	FSM	ENSMUSG00000060073.10	ENSMUST00000160027.8	2846	11	15	470	15	-470	multi-exon	FALSE	canonical	3	3391	junction_8	417.753084967664	275	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGAGTTCCTTTCCTTTG	4735	False	NA	15	True	AATAAA	-25	NA	71021409	71042651	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038081	chr12	-	174	1	Intergenic	novelGene_1227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTAATTTTTTACTAGA	NA	False	NA	NA	False	AAAAAG	-17	NA	71045652	71045478	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_71045500_71045700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038091	chr12	+	222	1	Intergenic	novelGene_1228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAGTAAGGCCGGGGCTG	1837	False	NA	NA	False	NA	NA	NA	71050232	71050454	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_71050200_71050500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038097	chr12	+	208	1	Intergenic	novelGene_1229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGTAAGGCCACGTCAT	2072	False	NA	NA	False	NA	NA	NA	71050467	71050675	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_71050500_71050700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038119	chr12	-	245	1	Intergenic	novelGene_1230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCATGTACTCAAGTACT	NA	False	NA	NA	False	NA	NA	NA	71092717	71092472	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_71092500_71092700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038131	chr12	+	177	1	Intergenic	novelGene_1231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAATTTAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	71122920	71123097	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_71122900_71123100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038142	chr12	-	872	5	FSM	ENSMUSG00000021079.17	ENSMUST00000221559.2	718	5	-30	-124	9	1	multi-exon	FALSE	canonical	3	163	junction_4	64.161417534216	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGTCTTTACTGTATA	NA	False	NA	-17	True	AATAAA	-14	NA	71183438	71169945	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_71170461_71172235_71172332_71173106_71173172_71178774_71178861_71183328
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038153	chr12	+	5168	28	FSM	ENSMUSG00000034601.18	ENSMUST00000045907.16	4507	28	-665	4	327	-4	multi-exon	FALSE	canonical	3	73	junction_27	19.0025628189986	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTCTGGCTGTTTCTTA	NA	False	NA	18	True	AATAAA	-16	NA	71183948	71290073	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71289717
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038155	chr12	+	5432	30	FSM	ENSMUSG00000034601.18	ENSMUST00000149564.8	5763	30	327	4	327	-4	multi-exon	FALSE	canonical	3	69	junction_27	23.3199327353747	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTCTGGCTGTTTCTTA	NA	False	NA	18	True	AATAAA	-16	NA	71183948	71290073	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71262815_71262971_71265964_71266074_71289717
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038178	chr12	+	195	1	Intergenic	novelGene_1232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACTAGTTGGCCATAAA	NA	False	NA	NA	False	NA	NA	NA	71230280	71230475	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_71230300_71230500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038184	chr12	+	203	1	Intergenic	novelGene_1233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAGGAGCTTTTCAAACC	NA	False	NA	NA	False	NA	NA	NA	71269322	71269525	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_71269300_71269500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038192	chr12	+	3729	4	FSM	ENSMUSG00000044548.12	ENSMUST00000061273.12	3650	4	-91	12	-91	-12	multi-exon	FALSE	canonical	3	14	junction_3	6.97614984548545	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGCTGGCTGTTGGTG	1122	False	NA	NA	False	TATAAA	-24	NA	71356566	71366869	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_71357082_71359459_71359593_71360558_71360715_71363944
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038200	chr12	-	187	1	Intergenic	novelGene_1234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTAGATAGCATTTTTT	NA	False	NA	NA	False	NA	NA	NA	71845755	71845568	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_71845600_71845800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038205	chr12	+	201	1	Intergenic	novelGene_1235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	285	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGTTTATACATTTACA	NA	False	NA	NA	False	AAAAAG	-6	NA	71845798	71845999	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_71845800_71846000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038214	chr12	+	5816	25	NIC	ENSMUSG00000034574.11	novel	5835	26	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_1	18.350560088334	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTTTTCTATGCATTA	1795	False	NA	22	True	AATAAA	-22	NA	71877843	72039107	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_71877971_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038224	chr12	+	5924	25	NIC	ENSMUSG00000034574.11	novel	5879	26	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	21.2589441961103	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTTTTCTATGCATTA	1822	False	NA	22	True	AATAAA	-22	NA	71877870	72039107	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_71878106_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038236	chr12	-	908	1	NIC	ENSMUSG00000019718.9	novel	1831	5	NA	NA	22	-7246	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCTTCAGTGTCTTTGCC	NA	False	NA	0	True	AATAAA	-25	NA	72132191	72131283	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_-_72131300_72132200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038239	chr12	+	1864	7	FSM	ENSMUSG00000005078.17	ENSMUST00000057257.10	1292	7	28	-600	28	0	multi-exon	FALSE	canonical	3	493	junction_1	87.1563091360701	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATGTTCTGATAATTCT	NA	False	NA	14	True	AATAAA	-20	NA	72132658	72148235	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038270	chr12	+	184	1	Intergenic	novelGene_1236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAAAAGAGCTGGGCGTG	NA	False	NA	NA	False	NA	NA	NA	72695249	72695433	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_72695200_72695400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038281	chr12	+	202	1	Intergenic	novelGene_1237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	376	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGAGCCTCTTTCCAA	3582	False	NA	NA	False	NA	NA	NA	72739459	72739661	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_72739500_72739700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038290	chr12	-	201	1	Intergenic	novelGene_1238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGGAACTGAATGATCAA	NA	False	NA	NA	False	NA	NA	NA	72773797	72773596	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_72773600_72773800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038310	chr12	+	4039	3	FSM	ENSMUSG00000021096.12	ENSMUST00000223410.2	3900	3	-62	-77	42	77	multi-exon	FALSE	canonical	3	365	junction_1	26.5	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGATCCTTGCTTTTTG	NA	False	NA	14	True	AATAAA	-19	NA	72808026	72836251	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_72808406_72830456_72831311_72833445
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038318	chr12	+	179	1	Intergenic	novelGene_1239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGATGTAGGATTTGA	NA	False	NA	NA	False	NA	NA	NA	72982118	72982297	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_72982100_72982300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038331	chr12	+	163	1	Intergenic	novelGene_1240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAGTCCCCAGCACCGGA	NA	False	NA	NA	False	NA	NA	NA	73143165	73143328	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_73143200_73143300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038336	chr12	-	6244	3	FSM	ENSMUSG00000034460.10	ENSMUST00000043208.8	6402	3	158	0	158	0	multi-exon	FALSE	canonical	3	64	junction_1	15	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGTGTTGAAGAAAGATT	NA	False	NA	-1	True	AATAAA	-18	NA	73160041	73146382	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_73151013_73155434_73156124_73159116
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038340	chr12	-	6205	4	NIC	ENSMUSG00000034460.10	novel	6402	3	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	12.2836838484589	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGTGTTGAAGAAAGATT	NA	False	NA	-1	True	AATAAA	-18	NA	73160208	73146382	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_-_73151013_73155434_73156124_73159116_73159932_73160137
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038348	chr12	+	184	1	Intergenic	novelGene_1241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAATTCTCAACTTGTT	NA	False	NA	NA	False	NA	NA	NA	73198060	73198244	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_73198100_73198200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038359	chr12	-	1698	5	FSM	ENSMUSG00000034442.12	ENSMUST00000116420.4	2066	5	-15	383	-14	87	multi-exon	FALSE	canonical	3	66	junction_2	19.266226926931	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTGTATAGACTGATTT	NA	False	NA	-8	True	AGTAAA	-20	NA	73333498	73327167	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408_73332050_73333457
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038392	chr12	+	3950	15	NNC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	97	-638	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_1	110.208707385912	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGGTCAGCGCTTACG	8455	False	NA	20	True	AATAAA	-20	NA	73954774	73993666	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr12_+_73955099_73973327_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988503_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038406	chr12	+	188	1	Intergenic	novelGene_1242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAATTAAATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	73983097	73983285	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_73983100_73983300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038436	chr12	+	185	1	Intergenic	novelGene_1243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGCAGCTTTCTATATAC	NA	False	NA	NA	False	NA	NA	NA	75560697	75560882	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_75560700_75560900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038439	chr12	+	200	1	Intergenic	novelGene_1244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAATCCCTTAATAAGTA	NA	False	NA	NA	False	NA	NA	NA	75663417	75663617	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_75663400_75663600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038444	chr12	-	2989	2	FSM	ENSMUSG00000045690.9	ENSMUST00000062370.9	2979	2	-8	-2	-8	2	multi-exon	FALSE	canonical	3	148	junction_1	0	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGGTATCTTGTCTTAT	6402	False	NA	0	True	AATAAA	-19	NA	75716319	75677367	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_75680283_75716245
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038454	chr12	+	185	1	Intergenic	novelGene_1245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCTTTAAAAATTTTACT	NA	False	NA	NA	False	NA	NA	NA	75688404	75688589	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_75688400_75688600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038461	chr12	-	3273	3	FSM	ENSMUSG00000021054.7	ENSMUST00000021450.6	3323	3	34	16	1	-16	multi-exon	FALSE	canonical	3	57	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTTTCTTCTTTTTGCCT	NA	False	NA	NA	False	AATAAA	-22	NA	75782469	75761038	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_75763439_75769425_75769516_75781686
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038468	chr12	+	179	1	Intergenic	novelGene_1246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAGCATGGGATATACGA	NA	False	NA	NA	False	NA	NA	NA	76215039	76215218	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_76215000_76215200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038475	chr12	+	6789	1	Intergenic	novelGene_1247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	76269309	76276098	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_76269300_76276100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038482	chr12	-	183	1	Intergenic	novelGene_1248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATATACATATATTTT	NA	False	NA	NA	False	NA	NA	NA	76279648	76279465	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_76279500_76279600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038514	chr12	+	3733	2	FSM	ENSMUSG00000033454.7	ENSMUST00000042779.4	12190	2	254	8203	254	-8203	multi-exon	FALSE	canonical	3	110	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTTTAATGTGAATTAC	NA	False	NA	NA	False	AATAAA	-19	NA	76417293	76435521	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_76417505_76431999
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038521	chr12	+	2527	1	FSM	ENSMUSG00000059970.8	ENSMUST00000219555.2	2526	1	3	-4	3	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTCTGGCGTTTTCAA	NA	False	NA	NA	False	AGTAAA	-20	NA	76451185	76453712	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_76451200_76453700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038536	chr12	+	199	1	Intergenic	novelGene_1249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGTAAGAGGGGATGTAT	1355	False	NA	NA	False	NA	NA	NA	76499332	76499531	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_76499300_76499500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038541	chr12	+	243	1	Intergenic	novelGene_1250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGAGTGTGACCTGTG	5227	False	NA	NA	False	NA	NA	NA	76538865	76539108	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_76538900_76539100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038550	chr12	+	179	1	Intergenic	novelGene_1251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGGAGAAGGAGA	4835	False	NA	NA	False	NA	NA	NA	76551917	76552096	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_76551900_76552100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038552	chr12	+	190	1	Intergenic	novelGene_1252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCCTTATAAGAGTTGC	NA	False	NA	NA	False	NA	NA	NA	76560609	76560799	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_76560600_76560800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038559	chr12	+	4962	18	NIC	ENSMUSG00000052609.10	novel	4535	18	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_13	13.5993079408692	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGGCCTCCTTCC	7220	False	NA	22	True	NA	NA	NA	76580329	76625816	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_76580593_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618417_76618820_76618844_76619168_76619520_76620020_76620135_76622630_76624051_76624448
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038560	chr12	+	4959	18	FSM	ENSMUSG00000052609.10	ENSMUST00000219063.2	4535	18	-64	-360	-4	0	multi-exon	FALSE	canonical	3	37	junction_13	11.6696157090046	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGGCCTCCTTCC	7220	False	NA	22	True	NA	NA	NA	76580329	76625816	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_76580593_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618417_76618823_76618844_76619168_76619520_76620020_76620135_76622630_76624051_76624448
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038578	chr12	+	603	4	FSM	ENSMUSG00000090258.8	ENSMUST00000041262.14	676	4	24	49	7	12	multi-exon	FALSE	canonical	3	492	junction_2	1.88561808316413	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTAAAAAAAATAGC	NA	False	NA	-40	True	NA	NA	NA	76812335	76829905	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_76812413_76820031_76820168_76822367_76822439_76829586
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038584	chr12	+	188	1	Intergenic	novelGene_1253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATATAACAAACCCCTT	NA	False	NA	NA	False	NA	NA	NA	76824274	76824462	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_76824300_76824500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038587	chr12	-	1016	2	FSM	ENSMUSG00000042808.11	ENSMUST00000082431.6	1010	2	-2	-4	-2	0	multi-exon	FALSE	canonical	3	177	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTCTCTGTCTTCCTTT	NA	False	NA	-1	True	AATAAA	-20	NA	76842275	76839106	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_76839775_76841927
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038595	chr12	-	3352	7	FSM	ENSMUSG00000021062.16	ENSMUST00000021459.14	3158	7	-194	0	161	0	multi-exon	FALSE	canonical	3	60	junction_1	4.01732359773132	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGTGGGTCTGTATGAA	NA	False	NA	-2	True	AATAAA	-18	NA	76869521	76844733	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_76847176_76847339_76847406_76848665_76848756_76849841_76849920_76850341_76850403_76851216_76851278_76868967
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038609	chr12	+	2615	12	FSM	ENSMUSG00000033373.17	ENSMUST00000041008.10	2613	12	0	-2	0	2	multi-exon	FALSE	canonical	3	246	junction_4	27.7548298231568	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTTTTTTTTTTCCA	NA	False	NA	16	True	AATAAA	-17	NA	76884187	76968188	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_76884426_76909259_76909325_76920149_76920223_76921805_76921898_76934505_76934653_76934745_76934830_76944100_76944188_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966849
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038619	chr12	+	1913	6	NNC	ENSMUSG00000033373.17	novel	384	2	NA	NA	-7312	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	113.544000281829	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGTCTTTTTTTTTTC	NA	False	NA	14	True	AATAAA	-15	NA	76948947	76968186	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr12_+_76949034_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966849
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038632	chr12	+	129	1	Intergenic	novelGene_1254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACACCAGCCACAGCCAG	NA	False	NA	NA	False	NA	NA	NA	76980171	76980300	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_76980200_76980300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038645	chr12	+	2965	12	FSM	ENSMUSG00000021065.17	ENSMUST00000171770.10	2765	12	-93	-107	-70	0	multi-exon	FALSE	canonical	3	35	junction_1	20.7412233753807	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGAAGTTTCTGGAAT	NA	False	NA	13	True	AATAAA	-14	NA	77284828	77522763	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_77284974_77324134_77324230_77370618_77370712_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038681	chr12	+	5043	15	NIC	ENSMUSG00000021112.10	novel	5283	15	NA	NA	-10	4	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	32.7592485772635	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGGACACTTTCTTAT	NA	False	NA	20	True	AATAAA	-29	NA	78795670	78887364	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_78795720_78841018_78841108_78843876_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038689	chr12	+	189	1	Intergenic	novelGene_1255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCATAGACATTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	78877020	78877209	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_78877000_78877200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038697	chr12	-	1376	9	FSM	ENSMUSG00000021114.10	ENSMUST00000021536.9	3667	9	34	2257	34	20	multi-exon	FALSE	canonical	3	904	junction_8	86.5761947650739	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTTCTTTTTCTTTTT	3	True	NA	-1	True	AGTAAA	-16	NA	78908378	78889755	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_78890385_78891999_78892079_78894540_78894608_78895169_78895274_78896513_78896559_78897245_78897314_78899038_78899119_78904000_78904119_78908192
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038707	chr12	+	182	1	Intergenic	novelGene_1256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATTGATAAAGTTT	3464	False	NA	NA	False	NA	NA	NA	78891187	78891369	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_78891200_78891400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038722	chr12	+	1402	9	NNC	ENSMUSG00000021116.11	novel	3405	8	NA	NA	-29	-1689	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	1484.77762960485	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTAGGCTTCTTCCTTCTT	NA	False	NA	24	True	AATAAA	-17	NA	78908829	78932095	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr12_+_78908955_78913299_78913370_78913446_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905_78928004_78930031_78930176_78931564
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038748	chr12	-	2343	4	FSM	ENSMUSG00000021120.12	ENSMUST00000072154.9	2339	4	-4	0	-4	0	multi-exon	FALSE	canonical	3	102	junction_1	16.0485374896143	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGGACTTGTTTTTTTAT	NA	False	NA	-1	True	AATAAA	-30	NA	79136429	79127437	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_79129271_79130389_79130474_79132420_79132631_79136213
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038762	chr12	-	1287	6	FSM	ENSMUSG00000021124.14	ENSMUST00000055262.13	1490	6	-34	237	-34	75	multi-exon	FALSE	canonical	3	652	junction_4	37.0534748707864	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGTATAACATTAATAGCT	NA	False	NA	0	True	AATAAA	-27	NA	79219475	79203027	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_79203346_79204621_79204684_79207182_79207357_79211721_79211914_79213124_79213184_79218993
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038772	chr12	-	2857	7	FSM	ENSMUSG00000066441.15	ENSMUST00000161204.8	3262	7	407	-2	-93	2	multi-exon	FALSE	canonical	3	91	junction_5	13.7113092008021	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATGGGGATATTGGAAA	NA	False	NA	-16	True	AATAAA	-42	NA	79238660	79221108	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_79223025_79229426_79229617_79231897_79232108_79233187_79233293_79235254_79235411_79235762_79235882_79238499
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038782	chr12	+	201	1	Intergenic	novelGene_1257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCAAACCAAAACCCAAAAA	8012	False	NA	NA	False	NA	NA	NA	79335256	79335457	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_79335300_79335500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038796	chr12	+	220	1	Intergenic	novelGene_1258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	359	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGCCTATGCTTGATTC	3234	False	NA	NA	False	NA	NA	NA	79765614	79765834	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_79765600_79765800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038805	chr12	-	2993	2	FSM	ENSMUSG00000021127.8	ENSMUST00000021552.3	2990	2	0	-3	0	3	multi-exon	FALSE	canonical	3	257	junction_1	0	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTATAGGTTTTTCCT	9167	False	NA	95	True	AATAAA	-21	NA	80159787	80154524	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_80157323_80159592
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038817	chr12	-	3761	21	FSM	ENSMUSG00000015143.16	ENSMUST00000021554.16	3734	21	-22	-5	-22	5	multi-exon	TRUE	canonical	3	154	junction_2	44.8659113358906	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTGTTCCTTTGGCT	NA	False	NA	0	True	ATTAAA	-21	NA	80307167	80214315	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_80215255_80215631_80215791_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038818	chr12	-	3746	21	FSM	ENSMUSG00000015143.16	ENSMUST00000167327.2	2664	21	-302	-780	-22	5	multi-exon	FALSE	canonical	3	172	junction_3	39.4366263770115	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTGTTCCTTTGGCT	NA	False	NA	0	True	ATTAAA	-21	NA	80307167	80214315	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_80215255_80215631_80215791_80216956_80217023_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038840	chr12	+	190	1	Intergenic	novelGene_1259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATTGTACTACACACACA	NA	False	NA	NA	False	NA	NA	NA	80222211	80222401	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_80222200_80222400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038845	chr12	-	205	1	Intergenic	novelGene_1260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGATACTGTCTCTGTGC	NA	False	NA	NA	False	NA	NA	NA	80503445	80503240	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_80503200_80503400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038858	chr12	+	3210	9	FSM	ENSMUSG00000032705.10	ENSMUST00000038185.10	3310	9	105	-5	-20	5	multi-exon	FALSE	canonical	3	165	junction_6	24.0724816959116	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATTGTAAATGTGAAGCT	2768	False	NA	27	True	AATAAA	-24	NA	80509973	80544901	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_80510055_80522496_80522963_80527228_80527486_80531019_80531147_80536175_80536508_80537554_80537662_80537868_80538005_80539315_80539673_80543554
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038867	chr12	+	196	1	Intergenic	novelGene_1261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTTTTATCATTTTGA	5971	False	NA	NA	False	NA	NA	NA	80525196	80525392	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_80525200_80525400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038882	chr12	-	877	5	FSM	ENSMUSG00000021131.15	ENSMUST00000166931.2	506	5	-35	-336	-19	1	multi-exon	FALSE	canonical	3	979	junction_4	3763.79924411491	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTTCTTATTTATTTG	NA	False	NA	0	True	AATAAA	-32	NA	80690641	80680794	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_80681302_80684263_80684385_80687730_80687819_80689562_80689620_80690537
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038883	chr12	-	827	4	FSM	ENSMUSG00000021131.15	ENSMUST00000021559.14	1293	4	467	-1	-26	1	multi-exon	FALSE	canonical	3	8000	junction_3	570.898122843881	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTTCTTATTTATTTG	NA	False	NA	0	True	AATAAA	-32	NA	80690648	80680794	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_80681302_80684263_80684385_80687730_80687819_80690537
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038917	chr12	+	208	1	Intergenic	novelGene_1262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGTAAACTCTAGGGTTA	7438	False	NA	NA	False	NA	NA	NA	80700118	80700326	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_80700100_80700300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038934	chr12	+	4979	6	FSM	ENSMUSG00000021133.10	ENSMUST00000068519.7	4977	6	-4	2	-4	-2	multi-exon	FALSE	canonical	3	47	junction_3	3.86781592116274	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGAGATGTAGTCCTTC	3455	False	NA	15	True	AATAAA	-17	NA	80837328	80927607	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_80837590_80874799_80875018_80915200_80915399_80916848_80916985_80920922_80921351_80923869
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038946	chr12	-	189	1	Intergenic	novelGene_1263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCACATTACAGAAATAGAG	4399	False	NA	NA	False	NA	NA	NA	80964394	80964205	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_80964200_80964400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038953	chr12	+	1534	8	FSM	ENSMUSG00000021134.18	ENSMUST00000094693.11	1527	8	-7	0	-7	0	multi-exon	FALSE	canonical	3	1278	junction_1	232.390680904869	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTGTTTCTCTCAA	NA	False	NA	NA	False	AATAAA	-23	NA	80992270	80997281	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038984	chr12	+	2720	7	FSM	ENSMUSG00000021134.18	ENSMUST00000153056.8	2720	7	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	608.09467921442	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTGGTCTGTTTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	80992305	80997277	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_80992443_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80995943_80996267_80996379_80996493
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038990	chr12	+	1625	8	FSM	ENSMUSG00000021134.18	ENSMUST00000110356.3	1568	8	-53	-4	0	0	multi-exon	FALSE	canonical	3	562	junction_1	476.276244656911	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTGTTTCTCTCAA	NA	False	NA	NA	False	AATAAA	-23	NA	80992305	80997281	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000038994	chr12	+	2850	7	NIC	ENSMUSG00000021134.18	novel	2720	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	562	junction_1	513.606096363957	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTGGTCTGTTTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	80992305	80997277	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80995943_80996267_80996379_80996493
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039001	chr12	+	2048	9	NNC	ENSMUSG00000021134.18	novel	1568	8	NA	NA	1	1	intron_retention	FALSE	canonical	3	31	junction_6	842.827968434247	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTGGTCTGTTTCTCT	NA	False	NA	NA	False	AATAAA	-20	NA	80992306	80997278	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80994902_80995330_80995868_80995943_80996267_80996379_80996493
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039007	chr12	+	1625	8	NIC	ENSMUSG00000021134.18	novel	1568	8	NA	NA	1	-2	intron_retention	FALSE	canonical	3	289	junction_7	680.802857376675	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTGGTCTGTTTCTCTC	NA	False	NA	NA	False	AATAAA	-21	NA	80992306	80997279	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996490
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039032	chr12	+	2148	9	NNC	ENSMUSG00000021134.18	novel	1568	8	NA	NA	5	0	intron_retention	FALSE	canonical	3	68	junction_5	830.705865138197	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTGGTCTGTTTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	80992312	80997277	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80994902_80995437_80995868_80995943_80996267_80996379_80996493
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039042	chr12	-	188	1	Intergenic	novelGene_1264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAAAGATTTGCC	NA	False	NA	NA	False	NA	NA	NA	81016661	81016473	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_81016500_81016700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039051	chr12	+	3200	13	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-7403	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.2909728420852	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGCCTCTTTCTTTGG	NA	False	NA	17	True	AATAAA	-19	NA	81066178	81233188	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr12_+_81066267_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039061	chr12	+	3207	13	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-7377	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.4429327540028	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGCCTCTTTCTTTGG	NA	False	NA	17	True	AATAAA	-19	NA	81066204	81233188	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr12_+_81066267_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197392_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039072	chr12	+	3463	13	FSM	ENSMUSG00000021136.14	ENSMUST00000021564.11	3439	13	-20	-4	0	0	multi-exon	FALSE	canonical	3	56	junction_1	31.9699294476683	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGCCTCTTTCTTTGG	NA	False	NA	17	True	AATAAA	-19	NA	81073581	81233188	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_81073933_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039104	chr12	+	169	1	Intergenic	novelGene_1265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAATAATTAGCT	NA	False	NA	NA	False	NA	NA	NA	81588840	81589009	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_81588800_81589000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039117	chr12	-	209	1	Intergenic	novelGene_1266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGATTCCTACAAAAATAA	NA	False	NA	NA	False	AATAAA	-2	NA	81669931	81669722	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_81669700_81669900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039142	chr12	+	215	1	Intergenic	novelGene_1267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	82500002	82500217	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_82500000_82500200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039149	chr12	+	186	1	Intergenic	novelGene_1268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAACAGCTGTGGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	83564936	83565122	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_83564900_83565100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039190	chr12	-	3859	12	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-9242	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	37.1632538674499	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGCCATCGTATGGATC	NA	False	NA	NA	False	TTTAAA	-3	NA	83653238	83593622	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83653189
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039203	chr12	+	196	1	Intergenic	novelGene_1269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGAGTTAGTTACCGCA	1107	False	NA	NA	False	NA	NA	NA	83633693	83633889	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_83633700_83633900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039211	chr12	+	194	1	Intergenic	novelGene_1270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTCGGACCATCTTGGC	4428	False	NA	NA	False	NA	NA	NA	83637014	83637208	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_83637000_83637200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039216	chr12	+	188	1	Intergenic	novelGene_1271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGAGGGCTAATGAGGT	1089	False	NA	NA	False	NA	NA	NA	83652395	83652583	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_83652400_83652600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039223	chr12	-	191	1	Intergenic	novelGene_1272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATATAGCCGGGCATAGTG	5499	False	NA	NA	False	NA	NA	NA	83662992	83662801	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_83662800_83663000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039230	chr12	+	4205	19	FSM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	-19	40	-19	-40	multi-exon	FALSE	canonical	3	212	junction_1	109.211215111695	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTTCTTTGAGTCTTG	3962	False	NA	12	True	ATTAAA	-23	NA	83679006	83729857	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039252	chr12	+	2690	12	FSM	ENSMUSG00000019969.15	ENSMUST00000041806.13	2690	12	1	-1	1	1	multi-exon	FALSE	canonical	3	287	junction_9	21.5122490573192	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCTCTGTCCTGGCTGGT	3346	False	NA	10	True	ATTAAA	-21	NA	83734926	83781870	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_83735068_83746128_83746196_83746285_83746426_83759077_83759329_83761537_83761680_83769764_83769833_83771269_83771491_83774999_83775099_83775471_83775559_83777312_83777487_83778447_83778567_83780689
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039257	chr12	-	177	1	Intergenic	novelGene_1273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGTCACCGACACAG	NA	False	NA	NA	False	NA	NA	NA	83748376	83748199	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_83748200_83748400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039268	chr12	+	182	1	Intergenic	novelGene_1274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATTTTTATGTAAATGAA	NA	False	NA	NA	False	NA	NA	NA	83760340	83760522	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_83760300_83760500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039273	chr12	-	3619	12	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_8	18.4936888944748	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTATAGTTCTGTTTT	NA	False	NA	-2	True	NA	NA	NA	83968685	83840809	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83923441_83923587_83968591
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039291	chr12	-	216	1	Intergenic	novelGene_1275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGTGATATGAGCCAATT	NA	False	NA	NA	False	NA	NA	NA	83890851	83890635	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_83890600_83890900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039302	chr12	+	2308	1	FSM	ENSMUSG00000046791.9	ENSMUST00000053744.9	2344	1	38	-2	38	2	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTTCTAAGCCTAGAT	4013	False	NA	19	True	ATTAAA	-23	NA	83997419	83999727	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_83997400_83999700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039317	chr12	+	1594	3	FSM	ENSMUSG00000072949.7	ENSMUST00000168120.3	2272	3	-3	681	-3	16	multi-exon	FALSE	canonical	3	130	junction_1	2	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCCTTCAATCTTGGG	2816	False	NA	27	True	AATAAA	-38	NA	84056260	84064464	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_84056741_84061152_84061356_84063553
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039344	chr12	+	190	1	Intergenic	novelGene_1276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAATCACGTTGACATAT	NA	False	NA	NA	False	NA	NA	NA	84284582	84284772	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_84284600_84284800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039354	chr12	-	178	1	Intergenic	novelGene_1277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCCAAAGCAACAACTAAAAA	NA	False	NA	NA	False	NA	NA	NA	84294904	84294726	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_84294700_84294900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039363	chr12	+	204	1	Intergenic	novelGene_1278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGAGAACTGCCGGGCGGT	2534	False	NA	NA	False	NA	NA	NA	84319658	84319862	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_84319700_84319900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039366	chr12	+	3058	10	FSM	ENSMUSG00000072946.13	ENSMUST00000123614.8	3168	10	110	0	-23	0	multi-exon	FALSE	canonical	3	204	junction_5	23.1948270094864	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGACCACTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	84332115	84362606	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039396	chr12	+	1563	12	FSM	ENSMUSG00000021235.14	ENSMUST00000021661.13	1602	12	39	0	11	0	multi-exon	FALSE	canonical	3	205	junction_6	16.3656564409681	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTTTTCCTCTTCTGA	NA	False	NA	17	True	AATAAA	-17	NA	84408780	84420570	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_84409012_84413658_84413794_84414916_84414976_84415359_84415484_84417029_84417161_84417697_84417806_84417881_84417945_84418224_84418333_84418912_84419116_84419192_84419309_84419424_84419592_84420452
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039411	chr12	+	222	1	Intergenic	novelGene_1279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCAATTCCTTCCTTCTG	NA	False	NA	NA	False	AAAAAG	-21	NA	84450937	84451159	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_84450900_84451200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039420	chr12	+	1315	1	FSM	ENSMUSG00000098134.2	ENSMUST00000183146.2	1383	1	71	-3	71	3	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTGTGATCTTTCTTT	NA	False	NA	13	True	AATAAA	-22	NA	84464040	84465355	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_84464000_84465400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039429	chr12	+	211	1	Intergenic	novelGene_1280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTATCAATAGTCAAACTG	NA	False	NA	NA	False	AAAACA	-8	NA	84468016	84468227	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_84468000_84468200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039439	chr12	-	3409	12	FSM	ENSMUSG00000021238.12	ENSMUST00000085192.7	3399	12	-10	0	-9	0	multi-exon	FALSE	canonical	2	131	junction_11	16.2917613413438	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTTTTCCTTCTTTTG	NA	False	NA	NA	False	AATAAA	-33	NA	84497787	84477490	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_84479323_84480205_84480305_84480629_84480810_84483101_84483284_84483502_84483693_84484748_84484871_84486186_84486490_84487008_84487088_84488536_84488699_84488844_84488920_84490502_84490563_84497662
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039449	chr12	+	2193	6	FSM	ENSMUSG00000085793.4	ENSMUST00000137170.4	2270	6	75	2	75	-2	multi-exon	FALSE	canonical	3	123	junction_1	15.7810012356631	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGAGGCCCAGGTTTTCCT	NA	False	NA	3	True	AATAAA	-14	NA	84498270	84578345	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_84498318_84503014_84503090_84504722_84504761_84506392_84506460_84509142_84509227_84576463
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039465	chr12	+	213	1	Intergenic	novelGene_1281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATGTGAGTAATGTCTC	NA	False	NA	NA	False	NA	NA	NA	84539376	84539589	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_84539400_84539600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039472	chr12	+	186	1	Intergenic	novelGene_1282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAATGCATTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84556726	84556912	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_84556700_84556900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039476	chr12	+	386	1	Intergenic	novelGene_1283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCACATTTCAAGGGTTCA	NA	False	NA	NA	False	NA	NA	NA	84586575	84586961	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_84586600_84587000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039491	chr12	-	2458	19	FSM	ENSMUSG00000021240.7	ENSMUST00000021666.6	2309	19	-24	-125	19	5	multi-exon	FALSE	canonical	3	128	junction_18	37.2765772285566	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACTGATTTTTTTATTTA	NA	False	NA	NA	False	AATAAA	-29	NA	84664168	84649301	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84660819_84661850_84661979_84662099_84662219_84664056
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039508	chr12	+	192	1	Intergenic	novelGene_1284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCAGATTCAATTTCCAG	NA	False	NA	NA	False	NA	NA	NA	84670150	84670342	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_84670200_84670300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039514	chr12	-	208	1	Intergenic	novelGene_1285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCCCCAACAAAATAGTAT	5836	False	NA	NA	False	NA	NA	NA	84692958	84692750	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_84692800_84693000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039518	chr12	+	208	1	Intergenic	novelGene_1286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCCAAAACCCACAAACAGT	NA	False	NA	NA	False	NA	NA	NA	84706788	84706996	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_84706800_84707000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039538	chr12	+	1618	2	FSM	ENSMUSG00000021241.8	ENSMUST00000223089.2	843	2	-23	-752	-9	0	multi-exon	FALSE	canonical	3	319	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTATCGTGTTTTCAAT	NA	False	NA	15	True	TATAAA	-18	NA	84820041	84821862	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_84820146_84820348
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039540	chr12	+	869	4	FSM	ENSMUSG00000021241.8	ENSMUST00000021667.7	883	4	17	-3	-9	0	multi-exon	FALSE	canonical	0	0	junction_3	133.217449641137	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTATCGTGTTTTCAAT	NA	False	NA	15	True	TATAAA	-18	NA	84820041	84821862	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_84820146_84820348_84820452_84820566_84820683_84821316
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039576	chr12	+	730	8	FSM	ENSMUSG00000021243.15	ENSMUST00000021669.15	749	8	20	-1	20	1	multi-exon	FALSE	canonical	3	1900	junction_1	151.77601649692	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGTCTCAATTCTTAA	4649	False	NA	24	True	ATTAAA	-26	NA	85017690	85030078	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_85017740_85017988_85018057_85019763_85019836_85020864_85021014_85026168_85026242_85027288_85027377_85029009_85029105_85029942
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039593	chr12	+	7037	21	FSM	ENSMUSG00000021244.16	ENSMUST00000021670.15	7003	21	-34	0	-3	0	multi-exon	FALSE	canonical	3	62	junction_4	25.0129466476863	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCCTTTTCTCTTATTT	NA	False	NA	32	True	AATAAA	-42	NA	85043091	85117289	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85075543_85077662_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995_85104077_85107036_85107089_85111744_85111876_85116392_85116574_85116878
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039605	chr12	+	189	1	Intergenic	novelGene_1287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTATTGACAAGTAGCT	NA	False	NA	NA	False	NA	NA	NA	85061010	85061199	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_85061000_85061200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039613	chr12	+	2770	15	FSM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	-3	-3	-3	1	multi-exon	FALSE	canonical	3	294	junction_7	23.9123612470237	314	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGGATCTGTGCTCCTT	NA	False	NA	23	True	ATTAAA	-23	NA	85157603	85180865	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_85157734_85158271_85158306_85162046_85162096_85165132_85165189_85165300_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039639	chr12	+	1471	8	FSM	ENSMUSG00000004788.12	ENSMUST00000004910.12	1605	8	4	130	4	5	multi-exon	FALSE	canonical	3	336	junction_7	13.1661284657074	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGTTTATTGTTCTGAGC	NA	False	NA	36	True	AATAAA	-21	NA	85266258	85273272	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_85266499_85266595_85266717_85266870_85267020_85268250_85268415_85269517_85269614_85270154_85270293_85271328_85271396_85272776
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039656	chr12	-	5565	13	FSM	ENSMUSG00000021245.16	ENSMUST00000220854.2	4699	13	-6	-860	-6	0	multi-exon	FALSE	canonical	3	35	junction_11	18.8126730335342	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTTTGTTTTTGAAAATG	NA	False	NA	NA	False	AATAAA	-15	NA	85317379	85281293	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85309540_85309637_85312925_85316249_85317312
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039672	chr12	-	613	3	FSM	ENSMUSG00000008822.16	ENSMUST00000008966.13	648	3	29	6	12	5	multi-exon	FALSE	canonical	3	386	junction_2	28.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTACATTGCTTCCCCCC	4320	False	NA	-6	True	AATAAA	-18	NA	85327180	85319177	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_85319602_85326764_85326857_85327083
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039677	chr12	+	192	1	Intergenic	novelGene_1288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAAGACGTTCTGACTCC	NA	False	NA	NA	False	NA	NA	NA	85325382	85325574	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_85325400_85325600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039683	chr12	-	5415	22	FSM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	-25	-4	-25	4	multi-exon	FALSE	canonical	3	74	junction_16	12.716336556552	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGTGTTTGAGTAAGCC	7932	False	NA	1	True	AATAAA	-19	NA	85386161	85346283	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_85348701_85350240_85350448_85352236_85352399_85352910_85353141_85354703_85354764_85355592_85355764_85357160_85357323_85358111_85358221_85359719_85359876_85360955_85361003_85361175_85361377_85362353_85362499_85367487_85367681_85368802_85368854_85372081_85372147_85374162_85374274_85376617_85376750_85379274_85379381_85380759_85380831_85381371_85381428_85383081_85383260_85385776
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039693	chr12	-	3532	5	FSM	ENSMUSG00000021248.10	ENSMUST00000040766.9	1482	5	124	-2174	-33	0	multi-exon	FALSE	canonical	3	1293	junction_2	34.3110769285955	394	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGGTGTATTTGTCTGT	8588	False	NA	-1	True	AATAAA	-16	NA	85421497	85387387	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_85390324_85390998_85391126_85397576_85397651_85401568_85401681_85421214
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039701	chr12	-	200	1	Intergenic	novelGene_1289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAGAGACAGCAAGATTC	NA	False	NA	NA	False	NA	NA	NA	85438588	85438388	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_85438400_85438600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039704	chr12	+	237	1	Intergenic	novelGene_1290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCAGGATACCTTATGC	NA	False	NA	NA	False	NA	NA	NA	85545353	85545590	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_85545400_85545600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039711	chr12	-	162	1	Intergenic	novelGene_1291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATGCAATGTAAAGT	NA	False	NA	-1	True	NA	NA	NA	85556677	85556515	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_85556500_85556700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039721	chr12	-	182	1	Intergenic	novelGene_1292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTTTTGCTTACTGCT	NA	False	NA	NA	False	NA	NA	NA	85605246	85605064	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_85605100_85605200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039730	chr12	+	1704	4	FSM	ENSMUSG00000034271.17	ENSMUST00000050687.14	1643	4	-61	0	-61	0	multi-exon	FALSE	canonical	3	151	junction_1	28.5228952870419	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTCGAGTGGTGTCTG	6578	False	NA	34	True	AGTAAA	-20	NA	85646128	85686652	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_85646389_85654906_85655140_85678418_85678524_85685546
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039742	chr12	+	202	1	Intergenic	novelGene_1293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGAGCAAGTCTTGGTG	NA	False	NA	NA	False	NA	NA	NA	85790951	85791153	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_85791000_85791200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039753	chr12	+	3408	10	FSM	ENSMUSG00000034258.5	ENSMUST00000040461.4	3435	10	27	0	27	0	multi-exon	FALSE	canonical	3	40	junction_4	3.8522079607466	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCCTCATCATTTAGTG	NA	False	NA	NA	False	AATAAA	-14	NA	85793339	85860359	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_85794364_85829730_85829873_85832861_85833003_85842948_85843017_85845271_85845376_85849908_85850020_85851141_85851248_85851369_85851482_85851969_85852026_85858815
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039763	chr12	-	1532	5	FSM	ENSMUSG00000021252.12	ENSMUST00000021676.12	1169	5	-362	-1	-334	1	multi-exon	FALSE	canonical	3	716	junction_4	65.9104506129339	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTCTGTGTACTTTGGCC	NA	False	NA	-3	True	AATAAA	-22	NA	85871658	85862220	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_85862968_85863089_85863209_85866252_85866344_85868861_85869023_85871244
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039778	chr12	+	794	9	FSM	ENSMUSG00000007867.10	ENSMUST00000222821.2	783	9	-11	0	-11	0	multi-exon	FALSE	canonical	3	179	junction_5	10.7637992827812	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTCTTCCATTCTGTCC	NA	False	NA	7	True	AATAAA	-17	NA	86129349	86209233	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_86129415_86131867_86131961_86158384_86158450_86185566_86185600_86186825_86186870_86207922_86207996_86208225_86208302_86208760_86208824_86208951
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039803	chr12	+	3647	6	NNC	ENSMUSG00000021255.18	novel	4300	7	NA	NA	1023	0	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	240.979999170056	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTTCATGCGTTGTCTGT	NA	False	NA	19	True	AATAAA	-19	NA	86517913	86568402	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr12_+_86518093_86535320_86535438_86552588_86552700_86553122_86553285_86561054_86561325_86565594
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039819	chr12	-	3871	10	FSM	ENSMUSG00000021257.15	ENSMUST00000021682.9	3850	10	-21	0	-21	0	multi-exon	FALSE	canonical	3	66	junction_1	10.9341463112378	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTTAGCCTTGTTATTG	NA	False	NA	0	True	AATAAA	-19	NA	86773255	86747275	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_86749216_86749930_86750095_86752040_86752111_86763689_86763801_86764488_86764616_86767003_86767438_86768084_86768155_86768614_86768842_86769618_86770195_86773103
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039832	chr12	+	187	1	Intergenic	novelGene_1294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTGACCATTGCCATCT	515	False	NA	NA	False	NA	NA	NA	86892130	86892317	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_86892100_86892300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039841	chr12	-	4203	1	FSM	ENSMUSG00000034168.8	ENSMUST00000038422.8	4098	1	-100	-5	-100	5	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAGTCAGCAAATTTGT	NA	False	NA	-9	True	AATAAA	-21	NA	86931672	86927469	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_86927500_86931700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039848	chr12	+	194	1	Intergenic	novelGene_1295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAAATGGGTTCCACC	2063	False	NA	NA	False	NA	NA	NA	86954803	86954997	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_86954800_86955000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039853	chr12	+	4098	4	FSM	ENSMUSG00000034157.13	ENSMUST00000187814.7	4098	4	2	-2	2	2	multi-exon	FALSE	canonical	3	99	junction_3	3.2659863237109	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTATTTGCTTTGTA	NA	False	NA	9	True	AATAAA	-21	NA	86994118	87012138	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_86994274_86999517_86999706_87007045_87007216_87008553
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039861	chr12	+	199	1	Intergenic	novelGene_1296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGCCCTATCCCTGCTT	NA	False	NA	NA	False	NA	NA	NA	87100360	87100559	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_87100400_87100600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039864	chr12	-	4633	21	FSM	ENSMUSG00000034126.6	ENSMUST00000037788.6	5064	21	431	0	3	0	multi-exon	FALSE	canonical	3	48	junction_16	10.2834819006016	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTCTTGTGCTTGATT	6080	False	NA	NA	False	AATAAA	-22	NA	87194245	87153634	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_87156068_87156777_87156893_87157075_87157217_87158110_87158217_87158297_87158358_87158652_87158725_87163304_87163382_87164158_87164251_87164712_87164865_87166345_87166425_87169615_87169686_87171585_87171653_87174075_87174186_87175726_87175810_87177062_87177170_87178445_87178606_87180133_87180243_87182268_87182378_87184776_87184882_87186417_87186503_87193944
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039875	chr12	+	1673	9	FSM	ENSMUSG00000021033.12	ENSMUST00000063117.10	1656	9	-17	0	-17	0	multi-exon	FALSE	canonical	3	449	junction_5	40.5555175037873	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTTTTGTCATGGACAA	NA	False	NA	13	True	NA	NA	NA	87194474	87211497	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039884	chr12	+	2964	8	NIC	ENSMUSG00000021033.12	novel	1656	9	NA	NA	-9	0	intron_retention	FALSE	canonical	3	476	junction_5	37.1054756947086	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTTTTGTCATGGACAA	NA	False	NA	13	True	NA	NA	NA	87194482	87211497	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87208328_87208813_87208867_87209761_87209812_87210477
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039893	chr12	+	185	1	Intergenic	novelGene_1297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACAAAACACTGTAGCT	7379	False	NA	NA	False	NA	NA	NA	87274107	87274292	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_87274100_87274300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039899	chr12	-	2551	20	FSM	ENSMUSG00000021038.18	ENSMUST00000072744.15	2524	20	-22	-5	-22	0	multi-exon	FALSE	canonical	3	87	junction_1	8.24352343784865	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCATCTGGTTACTTAG	NA	False	NA	-5	True	AATAAA	-26	NA	87313052	87285641	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_87286611_87288010_87288116_87288710_87288801_87289259_87289347_87291228_87291319_87291613_87291656_87292902_87293038_87293592_87293669_87296161_87296236_87297250_87297279_87298489_87298593_87299408_87299443_87299939_87300033_87301003_87301061_87303258_87303324_87304188_87304228_87305854_87305996_87307405_87307509_87310678_87310772_87312925
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039906	chr12	+	1422	9	FSM	ENSMUSG00000021037.8	ENSMUST00000021425.8	1377	9	-26	-19	-26	0	multi-exon	TRUE	canonical	3	2699	junction_7	143.152890295656	1025	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGACTGACAGCCTTGTG	NA	False	NA	17	True	AGTAAA	-35	NA	87313445	87320772	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_87313696_87314928_87315120_87316648_87316732_87317110_87317229_87318112_87318202_87319345_87319475_87319896_87319999_87320220_87320273_87320364
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039917	chr12	-	2604	6	FSM	ENSMUSG00000050671.13	ENSMUST00000125733.8	2526	6	-78	0	-78	0	multi-exon	FALSE	canonical	3	77	junction_1	6.95701085237043	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGATAAAGGATTTGGGG	7591	False	NA	1	True	AATAAA	-21	NA	87346557	87325411	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_87326977_87329073_87329158_87329419_87329561_87331799_87332161_87333668_87333912_87346347
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039942	chr12	+	213	1	Intergenic	novelGene_1298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGTCTTATCATGTGTA	8264	False	NA	NA	False	NA	NA	NA	87382168	87382381	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_87382200_87382400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039949	chr12	-	4065	8	FSM	ENSMUSG00000079036.11	ENSMUST00000161712.8	2154	8	0	-1911	0	0	multi-exon	FALSE	canonical	3	77	junction_6	99.4164606745846	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTGTTTTGCCTTCTT	NA	False	NA	-2	True	ATTAAA	-15	NA	87490606	87472938	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87488412_87488551_87490411
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039952	chr12	-	3857	6	FSM	ENSMUSG00000079036.11	ENSMUST00000162961.8	3857	6	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_2	59.8431282604778	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTGTTTTGCCTTCTT	NA	False	NA	-2	True	ATTAAA	-15	NA	87490609	87472938	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87490411
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000039969	chr12	-	1810	4	NNC	ENSMUSG00000079036.11	novel	1883	6	NA	NA	742	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_3	115.494107593803	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTATCTGTCTTTGAG	NA	False	NA	-53	True	AATAAA	-22	NA	87484587	87474846	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr12_-_87476041_87478169_87478309_87480888_87480980_87484201
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040011	chr12	-	2280	14	FSM	ENSMUSG00000021039.10	ENSMUST00000021428.9	2232	14	-46	-2	-46	2	multi-exon	FALSE	canonical	3	814	junction_13	97.7330623652505	832	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTTATTTAGTGGACG	NA	False	NA	0	True	AATAAA	-22	NA	87519090	87496677	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87519017
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040027	chr12	+	217	1	Intergenic	novelGene_1299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTCTAGAGTCTTTCCA	NA	False	NA	9	True	TTTAAA	-3	NA	87504455	87504672	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_87504500_87504700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040039	chr12	+	2174	11	FSM	ENSMUSG00000021044.16	ENSMUST00000101165.9	2158	11	-9	-7	-9	2	multi-exon	TRUE	canonical	3	29	junction_1	14.3544418212622	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTTCTCAATCATTGT	NA	False	NA	17	True	AATAAA	-30	NA	88327314	88428496	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_88327366_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040067	chr12	-	3971	9	FSM	ENSMUSG00000020962.15	ENSMUST00000021345.14	6064	9	295	1798	-75	1628	multi-exon	FALSE	canonical	3	931	junction_7	74.7277349783867	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTGCAGTTTCTAGAGTC	1540	False	NA	NA	False	NA	NA	NA	91556488	91523833	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_91526626_91529682_91529773_91534313_91534635_91534910_91535045_91536536_91536613_91539339_91539408_91542357_91542566_91553473_91553576_91556308
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040074	chr12	-	163	1	Intergenic	novelGene_1300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAGTTATTAGCTAA	NA	False	NA	NA	False	NA	NA	NA	91597236	91597073	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_91597100_91597200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040079	chr12	-	6321	21	FSM	ENSMUSG00000020964.15	ENSMUST00000021347.12	6300	21	-15	-6	-15	6	multi-exon	FALSE	canonical	3	285	junction_17	38.6834589973544	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCGTGTGCCACATTCAA	NA	False	NA	-18	True	AATAAA	-24	NA	91815946	91772810	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040099	chr12	-	223	1	Intergenic	novelGene_1301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGCTTTGATTTCTTT	NA	False	NA	NA	False	GATAAA	-13	NA	94063228	94063005	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_94063000_94063200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040105	chr12	-	3724	17	FSM	ENSMUSG00000021003.11	ENSMUST00000021390.9	3832	17	108	0	-4	0	multi-exon	FALSE	canonical	3	22	junction_3	6.15648793956424	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGAGAATTTGCATTTG	NA	False	NA	NA	False	NA	NA	NA	98225610	98168552	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_98170347_98173652_98173730_98174969_98175134_98179240_98179419_98180591_98180743_98182509_98182597_98188858_98188949_98193426_98193555_98197674_98197800_98200500_98200657_98208900_98209032_98212512_98212552_98218268_98218409_98220423_98220538_98222885_98222950_98223130_98223200_98225393
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040117	chr12	-	226	1	Intergenic	novelGene_1302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGGCAGAAGGAGAGCT	NA	False	NA	NA	False	NA	NA	NA	98587321	98587095	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_98587100_98587300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040126	chr12	+	1956	11	FSM	ENSMUSG00000021007.15	ENSMUST00000101146.4	1913	11	-40	-3	0	0	multi-exon	FALSE	canonical	3	21	junction_2	15.3766056072203	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCACATATTTATTATTGC	NA	False	NA	17	True	NA	NA	NA	98594415	98636074	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_98594594_98598221_98598297_98603824_98603873_98614607_98614742_98624471_98624906_98625808_98625876_98628230_98628347_98629423_98629478_98630486_98630565_98635090_98635149_98635360
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040134	chr12	+	211	1	FSM	ENSMUSG00000021007.15	ENSMUST00000222378.2	1914	1	1731	-28	1731	28	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGGGTCACTCACTGAGA	NA	False	NA	NA	False	NA	NA	NA	98600999	98601210	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_98601000_98601200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040144	chr12	+	192	1	Intergenic	novelGene_1303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAACTATTTCCTGAA	NA	False	NA	NA	False	NA	NA	NA	98670892	98671084	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_98670900_98671100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040152	chr12	+	3601	17	FSM	ENSMUSG00000021012.17	ENSMUST00000110105.10	3514	17	-65	-22	-40	22	multi-exon	FALSE	canonical	3	883	junction_12	209.53098667023	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTTCTACTGTGGTCA	NA	False	NA	NA	False	AATAAA	-38	NA	98713182	98754034	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040192	chr12	+	2140	14	FSM	ENSMUSG00000021012.17	ENSMUST00000057000.17	3046	14	7	899	1	0	multi-exon	FALSE	canonical	3	91	junction_9	361.05984686441	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCTGTTTAATATCATT	NA	False	NA	24	True	ATTAAA	-21	NA	98713248	98753107	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040208	chr12	+	197	1	Intergenic	novelGene_1304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGTTATCTCTTAGAAGC	NA	False	NA	NA	False	NA	NA	NA	98845948	98846145	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_98845900_98846100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040219	chr12	+	2241	14	FSM	ENSMUSG00000021013.17	ENSMUST00000085109.10	2272	14	38	-7	0	1	multi-exon	FALSE	canonical	3	15	junction_7	3.54347470962493	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCACTTTTCACAAGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	98886870	98949498	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_98887043_98908476_98908598_98909561_98909626_98909720_98909881_98910083_98910174_98912827_98912873_98923539_98923626_98927660_98927749_98930755_98930867_98940900_98941041_98942235_98942411_98942685_98942809_98946060_98946145_98948716
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040224	chr12	+	187	1	Intergenic	novelGene_1305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAAGAAGGTTTTCTGTA	NA	False	NA	NA	False	NA	NA	NA	98970676	98970863	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_98970700_98970900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040238	chr12	+	206	1	Intergenic	novelGene_1306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAAACACACGGAAAGG	NA	False	NA	NA	False	NA	NA	NA	99317010	99317216	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_99317000_99317200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040251	chr12	+	229	1	Intergenic	novelGene_1307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	249	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGGACCAACACCTAAAG	NA	False	NA	NA	False	NA	NA	NA	99400920	99401149	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_99400900_99401100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040258	chr12	-	2075	6	FSM	ENSMUSG00000021176.7	ENSMUST00000046485.5	2068	6	-7	0	-7	0	multi-exon	TRUE	canonical	3	69	junction_2	7.87400787401181	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCATATTTATGGTATGTA	NA	False	NA	-6	True	ATTAAA	-23	NA	99849708	99683790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_99685363_99820868_99820960_99821796_99821899_99844615_99844662_99849020_99849117_99849540
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040262	chr12	+	2094	16	FSM	ENSMUSG00000021177.17	ENSMUST00000153627.8	2036	16	-54	-4	-34	4	multi-exon	FALSE	canonical	3	362	junction_1	45.8998910674089	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGGCCTGGAATGAAATT	NA	False	NA	23	True	ATTAAA	-23	NA	99850741	99921482	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498_99911608_99921221
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040287	chr12	+	1610	11	FSM	ENSMUSG00000021178.10	ENSMUST00000021595.10	1591	11	-15	-4	-15	4	multi-exon	FALSE	canonical	3	1446	junction_1	298.758363899657	766	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAGAGTTCATTTTCTCT	3958	False	NA	16	True	NA	NA	NA	100076397	100089668	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_100076471_100078589_100078644_100079314_100079412_100081096_100081222_100081678_100081865_100082045_100082175_100082957_100083055_100085331_100085522_100086245_100086398_100087251_100087407_100089316
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040299	chr12	-	3727	14	FSM	ENSMUSG00000021179.9	ENSMUST00000021596.9	3718	14	-7	-2	-2	2	multi-exon	TRUE	canonical	2	41	junction_5	13.3828469211889	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCAGCTTCTTATTTC	8549	False	NA	-3	True	GATAAA	-17	NA	100125914	100091708	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_100091991_100092459_100092532_100095553_100095693_100096616_100097543_100098409_100098797_100100615_100100792_100103916_100104038_100106263_100106398_100108151_100108558_100109997_100110449_100112128_100112288_100116075_100116310_100117469_100117594_100125798
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040309	chr12	-	3694	14	NIC	ENSMUSG00000021179.9	novel	3718	14	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	2	17	junction_12	19.2473774437334	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTGCAGCTTCTTATT	8565	False	NA	-5	True	GATAAA	-15	NA	100125898	100091710	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_-_100091991_100092459_100092532_100095553_100095693_100096616_100097543_100098409_100098797_100100615_100100792_100103916_100104038_100106263_100106398_100108151_100108558_100109997_100110449_100112128_100112288_100116075_100116310_100117484_100117594_100125798
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040325	chr12	+	3418	5	NIC	ENSMUSG00000001175.17	novel	4115	6	NA	NA	-2	820	intron_retention	FALSE	canonical	3	3420	junction_4	231.739481961965	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGTTAAATGCTTTGTA	9257	False	NA	30	True	AATAAA	-19	NA	100165785	100173574	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_100165976_100168651_100168683_100169833_100171979_100172356_100172493_100172658
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040335	chr12	-	3506	20	FSM	ENSMUSG00000033530.9	ENSMUST00000062957.8	3446	20	-60	0	-60	0	multi-exon	FALSE	canonical	3	208	junction_10	15.649378488982	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGGCTTTTGTCTTTCA	NA	False	NA	-1	True	AATAAA	-21	NA	100487145	100267028	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_100268030_100291802_100292006_100298837_100298979_100314194_100314293_100321261_100321379_100339802_100339964_100342434_100342508_100348379_100348438_100350405_100350524_100352114_100352220_100353369_100353454_100369615_100369754_100373258_100373323_100381393_100381567_100385750_100385830_100413118_100413241_100432438_100432570_100461530_100461700_100466334_100466490_100486829
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040344	chr12	+	184	1	Intergenic	novelGene_1308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAACAAATAAGGTCC	NA	False	NA	NA	False	NA	NA	NA	100423216	100423400	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_100423200_100423400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040353	chr12	-	191	1	Intergenic	novelGene_1309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATTACCTCATGATTTT	NA	False	NA	NA	False	NA	NA	NA	100760199	100760008	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_100760000_100760200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040376	chr12	+	195	1	Intergenic	novelGene_1310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCACATGGGTAGGAGAG	NA	False	NA	NA	False	NA	NA	NA	100882634	100882829	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_100882600_100882800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040382	chr12	+	211	1	Intergenic	novelGene_1311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTCTAGTTTCATAAAAC	NA	False	NA	NA	False	NA	NA	NA	101003312	101003523	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_101003300_101003500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040392	chr12	-	4568	15	FSM	ENSMUSG00000041846.16	ENSMUST00000048305.10	4516	15	-47	-5	-8	5	multi-exon	FALSE	canonical	3	387	junction_8	78.1559142917253	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGTACCTTATTAAAACAT	8764	False	NA	84	True	AATAAA	-18	NA	101049969	101005662	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040425	chr12	+	151	1	Intergenic	novelGene_1312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGCTACTAAAAGATAACA	NA	False	NA	NA	False	NA	NA	NA	101829145	101829296	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_101829100_101829300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040442	chr12	-	5358	11	FSM	ENSMUSG00000021189.12	ENSMUST00000021606.12	5363	11	5	0	2	0	multi-exon	FALSE	canonical	3	190	junction_2	46.8375917399689	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTCTATTTCTAATTT	NA	False	NA	-5	True	AATAAA	-20	NA	101924500	101885159	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_101889464_101892742_101892841_101899226_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914699_101924392
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040468	chr12	-	303	3	FSM	ENSMUSG00000113902.2	ENSMUST00000221191.2	511	3	219	-11	219	3	multi-exon	FALSE	canonical	3	411	junction_2	787	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTAAAGTGTGATTCTT	NA	False	NA	-6	True	AATAAA	-23	NA	101941967	101934357	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_101934470_101935751_101935894_101941918
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040472	chr12	+	5757	15	FSM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	-19	-6	-19	6	multi-exon	FALSE	canonical	3	176	junction_8	15.7246718923623	239	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTGTGCTTATTGGA	NA	False	NA	17	True	NA	NA	NA	101942227	101972689	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_101942394_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040483	chr12	-	1922	14	FSM	ENSMUSG00000021190.15	ENSMUST00000021607.9	1990	14	85	-17	85	3	multi-exon	FALSE	canonical	3	371	junction_3	48.4071734133467	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCTTTGTGGTTTGTGT	7574	False	NA	0	True	AAAACA	-32	NA	102405987	102360339	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_102360872_102361100_102361169_102361902_102362074_102364441_102364643_102366163_102366254_102366396_102366516_102368143_102368211_102368928_102368992_102369685_102369762_102370518_102370605_102372054_102372137_102379723_102379822_102389843_102390015_102405889
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040492	chr12	+	2962	13	FSM	ENSMUSG00000021192.17	ENSMUST00000179218.9	2827	13	-20	-115	-20	113	multi-exon	FALSE	canonical	3	120	junction_3	16.7257286836777	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTTTTTTTAATAACG	NA	False	NA	NA	False	AATAAA	-18	NA	102435373	102464279	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_102435623_102438256_102438825_102440804_102441033_102442428_102442649_102443055_102443180_102445856_102446061_102450662_102450834_102453378_102453508_102455677_102455777_102458271_102458498_102460012_102460119_102461958_102462023_102463705
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040504	chr12	+	1875	8	FSM	ENSMUSG00000021194.7	ENSMUST00000021610.7	1883	8	8	0	8	0	multi-exon	TRUE	canonical	3	24	junction_1	6.51841974088562	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTTTGATTTATTTTCG	NA	False	NA	24	True	AATAAA	-18	NA	102521235	102531287	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_102521430_102522143_102522191_102524724_102524819_102525547_102525617_102527603_102527763_102527925_102528343_102528856_102529333_102530868
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040507	chr12	-	2978	10	FSM	ENSMUSG00000057963.10	ENSMUST00000046518.12	2918	10	-60	0	-60	0	multi-exon	TRUE	canonical	3	205	junction_5	27.4851250454756	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTACGTGGTCACAGTC	2347	False	NA	-1	True	AATAAA	-20	NA	102671249	102534840	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_102536744_102540180_102540344_102545363_102545432_102550545_102550712_102554154_102554196_102554722_102554822_102572347_102572466_102589558_102589685_102641701_102641727_102670980
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040524	chr12	-	382	1	ISM	ENSMUSG00000057963.10	ENSMUST00000046518.12	2918	10	134520	1447	23667	-1447	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTCTGTTTTAATTTT	NA	False	NA	-1	True	NA	NA	NA	102536669	102536287	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr12_-_102536300_102536700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040530	chr12	+	182	1	Intergenic	novelGene_1313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACAATCTTTAAAACAACA	NA	False	NA	NA	False	NA	NA	NA	102682098	102682280	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_102682100_102682300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040535	chr12	-	171	1	Intergenic	novelGene_1314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATGGCAAGGAAAC	NA	False	NA	NA	False	NA	NA	NA	102706282	102706111	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_102706100_102706300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040545	chr12	-	1928	2	FSM	ENSMUSG00000041716.8	ENSMUST00000174651.2	2795	2	869	-2	869	2	multi-exon	FALSE	canonical	3	96	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATCTTTGTATACATTG	6359	False	NA	-21	True	AATAAA	-18	NA	102724062	102707988	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_102709654_102723799
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040546	chr12	-	1772	2	FSM	ENSMUSG00000096458.8	ENSMUST00000178384.2	1284	2	12	-500	-4	500	multi-exon	FALSE	canonical	3	30	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATCTTTGTATACATTG	NA	False	NA	-21	True	AATAAA	-18	NA	102709908	102707988	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_102709654_102709801
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040567	chr12	-	1147	2	FSM	ENSMUSG00000091931.6	ENSMUST00000173969.2	1152	2	5	0	5	0	multi-exon	FALSE	canonical	3	237	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTTTCTGTAGCCTCTT	6367	False	NA	-1	True	AATAAA	-20	NA	102724054	102719533	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_102720426_102723799
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040579	chr12	+	3292	11	FSM	ENSMUSG00000041712.8	ENSMUST00000046404.8	3261	11	-28	-3	-28	3	multi-exon	FALSE	canonical	3	541	junction_2	45.0115540722602	224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCTGATTGTTCTTGG	NA	False	NA	36	True	ATTAAA	-17	NA	102724197	102743969	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_102724438_102727629_102727764_102728179_102728241_102729716_102729813_102732066_102732121_102732504_102732611_102734328_102734538_102735352_102735503_102736039_102736203_102737477_102737540_102741952
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040602	chr12	+	197	1	Intergenic	novelGene_1315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGGAATCAATTCTTCT	NA	False	NA	NA	False	NA	NA	NA	102782732	102782929	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_102782700_102782900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040614	chr12	+	2828	6	FSM	ENSMUSG00000021203.16	ENSMUST00000021620.13	2791	6	-36	-1	-20	1	multi-exon	FALSE	canonical	3	84	junction_1	8.60232526704263	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTCTGGCTTCTTAAT	8140	False	NA	NA	False	ATTAAA	-17	NA	103354920	103372605	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_103355133_103366454_103366551_103367207_103367327_103369075_103369161_103369492_103369688_103370484
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040630	chr12	-	2906	9	FSM	ENSMUSG00000041645.15_ENSMUSG00000055271.6	ENSMUST00000044923.15	2850	9	-49	-7	-38	7	multi-exon	FALSE	canonical	3	750	junction_8	40.7106788815908	618	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTTGCAGTGTTTTATC	NA	False	NA	-5	True	ATTAAA	-27	NA	103392127	103374233	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_103374737_103376186_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103392037
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040647	chr12	+	2061	5	NIC	ENSMUSG00000041449.17	novel	1226	4	NA	NA	-12	743	combination_of_known_junctions	FALSE	canonical	3	40	junction_3	10.7325439668328	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTTCACAGAGCTTCTG	NA	False	NA	17	True	AATAAA	-23	NA	104214151	104220671	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_104214232_104216398_104217017_104217730_104218005_104218943_104219095_104219733
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040661	chr12	+	1804	5	NNC	ENSMUSG00000079012.12	novel	1658	5	NA	NA	-9694	2	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	12.328828005938	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTCTCAGCTTGCAGTC	660	False	NA	20	True	AATACA	-29	NA	104343728	104360518	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr12_+_104343932_104355322_104355972_104357714_104357989_104358900_104359052_104359991
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040689	chr12	+	185	1	Intergenic	novelGene_1316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGTGTTGAGGGACTTT	NA	False	NA	NA	False	AAAAAG	-6	NA	104923233	104923418	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_104923200_104923400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040701	chr12	+	924	2	FSM	ENSMUSG00000021102.5	ENSMUST00000021522.5	2925	2	-49	2050	-47	117	multi-exon	FALSE	canonical	3	651	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTGTGTGAGTCATTAAA	6311	False	NA	14	True	ATTAAA	-14	NA	104998899	105007115	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_104999242_105006533
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040713	chr12	-	1434	4	FSM	ENSMUSG00000041359.15	ENSMUST00000041316.15	1398	4	-36	0	20	0	multi-exon	FALSE	canonical	0	0	junction_2	814.330945555238	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGCTCTTGGAATTATG	NA	False	NA	-2	True	AATAAA	-23	NA	105189032	105183008	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_105183961_105184481_105184552_105184917_105185089_105188791
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040723	chr12	-	1327	4	FSM	ENSMUSG00000041359.15	ENSMUST00000176579.2	760	4	-12	-555	-2	-3	multi-exon	FALSE	canonical	3	100	junction_2	769.488574747323	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCGTGCTCTTGGAATT	NA	False	NA	-5	True	AATAAA	-20	NA	105188977	105183011	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_105183961_105184481_105184552_105184966_105185089_105188791
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040724	chr12	-	1205	3	FSM	ENSMUSG00000041359.15	ENSMUST00000175652.2	535	3	75	-745	-2	-3	multi-exon	FALSE	canonical	3	551	junction_2	399	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCGTGCTCTTGGAATT	NA	False	NA	-5	True	AATAAA	-20	NA	105188977	105183011	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_105183961_105184481_105184552_105188791
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040728	chr12	-	1328	3	FSM	ENSMUSG00000041359.15	ENSMUST00000101071.4	1299	3	-24	-5	-3	-3	multi-exon	FALSE	canonical	0	0	junction_1	973.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCGTGCTCTTGGAATT	NA	False	NA	-5	True	AATAAA	-20	NA	105188999	105183011	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_105183961_105184917_105185089_105188791
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040753	chr12	+	189	1	Intergenic	novelGene_1317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTAGTCTGTTTCATCAG	NA	False	NA	NA	False	NA	NA	NA	105635893	105636082	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_105635900_105636100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040766	chr12	+	214	1	Intergenic	novelGene_1318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTAACAGTGGCTTGAAA	NA	False	NA	NA	False	TTTAAA	-6	NA	105731371	105731585	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_105731400_105731600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040780	chr12	+	2805	9	FSM	ENSMUSG00000021111.16	ENSMUST00000166735.8	1033	9	-69	-1703	-6	0	multi-exon	FALSE	canonical	3	1577	junction_3	94.8235202890085	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGTATATTTTTTTATT	NA	False	NA	NA	False	AATAAA	-14	NA	105750946	105777671	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040839	chr12	-	179	1	Intergenic	novelGene_1319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGCGGGGGGGGGGAGGT	NA	False	NA	NA	False	NA	NA	NA	105807107	105806928	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_105806900_105807100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040845	chr12	-	179	1	Intergenic	novelGene_1320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGAAACAATCAGGGATT	NA	False	NA	NA	False	NA	NA	NA	105860423	105860244	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_105860200_105860400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040850	chr12	+	185	1	Intergenic	novelGene_1321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTGTGATCCCAGCACT	NA	False	NA	NA	False	NA	NA	NA	105917470	105917655	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_105917500_105917700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040853	chr12	+	168	1	Intergenic	novelGene_1322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAGTAAGGTGGATTA	NA	False	NA	NA	False	NA	NA	NA	105932653	105932821	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_105932700_105932800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040865	chr12	+	1711	14	FSM	ENSMUSG00000021115.16	ENSMUST00000085026.12	3711	14	-29	2029	-20	-12	multi-exon	FALSE	canonical	3	514	junction_12	169.729126349489	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGGTCTTTTACACAAGC	NA	False	NA	11	True	AATAAA	-17	NA	105976521	106041656	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040885	chr12	-	2792	13	FSM	ENSMUSG00000056770.16	ENSMUST00000071095.14	2755	13	-37	0	-37	0	multi-exon	FALSE	canonical	3	469	junction_9	51.1017503505397	253	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTTTGTTCCTTGTC	NA	False	NA	0	True	ATTAAA	-19	NA	108145610	108072689	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108145411
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040910	chr12	+	2569	12	FSM	ENSMUSG00000021258.11	ENSMUST00000221167.2	2789	12	221	-1	62	1	multi-exon	FALSE	canonical	3	54	junction_11	12.5217166726353	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTATGTGTGAGTACAGC	NA	False	NA	25	True	AATAAA	-18	NA	108146058	108169617	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_108146140_108148435_108148468_108152634_108152882_108153437_108153520_108155323_108155456_108159930_108160037_108160600_108160659_108161325_108161496_108161841_108162111_108162597_108162632_108165567_108165643_108168334
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040919	chr12	-	4303	6	FSM	ENSMUSG00000084883.3	ENSMUST00000222310.2	4298	6	-2	-3	-2	3	multi-exon	TRUE	canonical	3	57	junction_4	9.83056458195561	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTGTGTAGTGCTTTT	NA	False	NA	-4	True	AATAAA	-22	NA	108241686	108169857	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_108172694_108173380_108173480_108174092_108174189_108177773_108177882_108187967_108188042_108240596
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040941	chr12	-	183	1	Intergenic	novelGene_1323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTTAAATAAATAATAAAGA	NA	False	NA	0	True	NA	NA	NA	108444841	108444658	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_108444700_108444800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040952	chr12	+	2212	14	FSM	ENSMUSG00000021262.16	ENSMUST00000021689.14	2180	14	-32	0	-28	0	multi-exon	FALSE	canonical	3	149	junction_6	17.7207129833721	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGGCTCTGGCTCACTCT	NA	False	NA	17	True	AATAAA	-17	NA	108520950	108654775	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_108521473_108614573_108614743_108619180_108619359_108639547_108639612_108640665_108640725_108641655_108641886_108642360_108642483_108646087_108646149_108647749_108647814_108649453_108649521_108649606_108649670_108652308_108652376_108652666_108652725_108654287
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040966	chr12	+	203	1	Intergenic	novelGene_1324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGAATTGTGT	2028	False	NA	NA	False	NA	NA	NA	108679817	108680020	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_108679800_108680000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040975	chr12	+	193	1	Intergenic	novelGene_1325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTGTAGAACTTGTAGA	NA	False	NA	NA	False	NA	NA	NA	108711890	108712083	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_108711900_108712100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040992	chr12	-	1870	11	NIC	ENSMUSG00000021266.17	novel	1824	11	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	246	junction_1	519.514003661114	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCACTGTCTGACCAAGCA	NA	False	NA	-31	True	AATAAA	-19	NA	108860074	108825955	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_-_108826260_108827194_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000040998	chr12	-	2818	10	FSM	ENSMUSG00000021266.17	ENSMUST00000109848.10	2831	10	13	0	13	0	multi-exon	FALSE	canonical	3	1835	junction_9	109.614475929657	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCACTGTCTGACCAAGCA	NA	False	NA	-31	True	AATAAA	-19	NA	108860087	108825955	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041026	chr12	+	1622	5	FSM	ENSMUSG00000040856.18	ENSMUST00000109844.11	1703	5	5	76	5	6	multi-exon	FALSE	canonical	3	24	junction_4	4.02336923485777	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTAAAGAAATAAGTATGT	NA	False	NA	NA	False	NA	NA	NA	109419385	109426550	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_109419653_109420910_109420975_109421418_109421550_109423999_109424142_109425532
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041035	chr12	+	1734	8	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_4	128.442792792777	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGGGTGTGCTACT	NA	False	NA	NA	False	ACTAAA	-1	NA	109506879	109538160	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_109506983_109509582_109509733_109509909_109510626_109512312_109512426_109515913_109515988_109516087_109516246_109524670_109524755_109537824
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041039	chr12	+	1689	8	NIC	ENSMUSG00000021268.18	novel	1988	9	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_4	137.349249457471	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGGGTGTGCTACT	NA	False	NA	NA	False	ACTAAA	-1	NA	109506880	109538160	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_109506983_109509582_109509689_109509909_109510626_109512312_109512426_109515913_109515988_109516087_109516246_109524670_109524755_109537824
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041040	chr12	+	1770	9	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	187	junction_2	97.0602261485105	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGGGTGTGCTACT	NA	False	NA	NA	False	ACTAAA	-1	NA	109506880	109538160	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_109506983_109509582_109509689_109509909_109510626_109512312_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041045	chr12	+	1908	10	FSM	ENSMUSG00000021268.18	ENSMUST00000143836.8	1896	10	-7	-5	-3	0	multi-exon	FALSE	canonical	3	71	junction_3	140.228473183437	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGGGTGTGCTACT	NA	False	NA	NA	False	ACTAAA	-1	NA	109506880	109538160	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_109506983_109509582_109509733_109509909_109510626_109510830_109510925_109512312_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041058	chr12	+	1813	9	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	241	junction_3	82.0182906430023	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGGGTGTGCTACT	NA	False	NA	NA	False	ACTAAA	-1	NA	109506881	109538160	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_109506983_109509582_109509733_109509909_109510626_109512312_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041059	chr12	+	1863	10	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_3	145.012983667321	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGGGTGTGCTACT	NA	False	NA	NA	False	ACTAAA	-1	NA	109506881	109538160	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_109506983_109509582_109509689_109509909_109510626_109510830_109510925_109512312_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041060	chr12	+	2056	9	NNC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	138.267799487082	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGGGTGTGCTACT	NA	False	NA	NA	False	ACTAAA	-1	NA	109506881	109538160	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr12_+_109506983_109509582_109509733_109509909_109510626_109512069_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041094	chr12	+	2322	10	NIC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	206.409756683934	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2865	False	NA	NA	False	ACTAAA	-5	NA	109612563	109628150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109624486_109624556_109626156_109626242_109627179
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041095	chr12	+	3230	10	NIC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	549	junction_7	35.1002092779804	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2865	False	NA	NA	False	ACTAAA	-5	NA	109612563	109628150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_109613186_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041096	chr12	+	2366	11	ISM	ENSMUSG00000097451.12	ENSMUST00000238333.2	2746	13	1254	0	0	0	3prime_fragment	FALSE	canonical	3	66	junction_8	178.955888419465	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2865	False	NA	NA	False	ACTAAA	-5	NA	109612563	109628150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623266_109624486_109624556_109626156_109626242_109627179
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041097	chr12	+	3221	10	NIC	ENSMUSG00000097451.12	novel	2746	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	66	junction_7	180.249484169054	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2865	False	NA	NA	False	ACTAAA	-5	NA	109612563	109628150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_109613186_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623266_109624486_109624556_109626156_109626242_109627179
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041098	chr12	+	2375	11	FSM	ENSMUSG00000097451.12	ENSMUST00000181253.10	2368	11	0	-7	0	0	multi-exon	FALSE	canonical	3	396	junction_3	76.4947056991528	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2865	False	NA	NA	False	ACTAAA	-5	NA	109612563	109628150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041100	chr12	+	3177	9	NIC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_6	212.155861043243	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2865	False	NA	NA	False	ACTAAA	-5	NA	109612563	109628150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_109613186_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109624486_109624556_109626156_109626242_109627179
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041108	chr12	+	2370	11	NIC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_8	190.764252416432	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2865	False	NA	NA	False	ACTAAA	-5	NA	109612563	109628150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624491_109624556_109626156_109626242_109627179
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041124	chr12	+	2373	11	NIC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	183.218039504848	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2865	False	NA	NA	False	ACTAAA	-5	NA	109612563	109628150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_109613186_109615587_109615677_109616505_109616590_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041129	chr12	+	2360	11	FSM	ENSMUSG00000097451.12	ENSMUST00000182088.9	1627	11	1	-734	1	0	multi-exon	FALSE	canonical	3	17	junction_8	192.423075539292	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2866	False	NA	NA	False	ACTAAA	-5	NA	109612564	109628150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623266_109624491_109624556_109626156_109626242_109627179
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041139	chr12	+	2412	11	NIC	ENSMUSG00000097451.12	novel	3223	26	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_10	190.767502473561	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2866	False	NA	NA	False	ACTAAA	-5	NA	109612564	109628150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627141
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041144	chr12	+	2315	10	NIC	ENSMUSG00000097451.12	novel	1627	11	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	202.636023511841	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2867	False	NA	NA	False	ACTAAA	-5	NA	109612565	109628150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109624491_109624556_109626156_109626242_109627179
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041166	chr12	-	186	1	Intergenic	novelGene_1326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAGAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	110160407	110160221	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_110160200_110160400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041184	chr12	+	2681	14	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	-23	2	combination_of_known_junctions	TRUE	canonical	3	197	junction_1	321.388242421629	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTATTTTCCTATG	NA	False	NA	16	True	AATAAA	-18	NA	110413530	110538124	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041212	chr12	+	4066	13	FSM	ENSMUSG00000017843.15	ENSMUST00000109832.3	4108	13	42	0	42	0	multi-exon	FALSE	canonical	3	190	junction_12	229.453638502906	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCTCTATGAAACTAAATT	4963	False	NA	3	True	AATAAA	-17	NA	110452214	110549496	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041221	chr12	+	237	1	Intergenic	novelGene_1327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGCTGTGAGTCTCTCC	NA	False	NA	NA	False	AATAAA	-41	NA	110458708	110458945	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_110458700_110458900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041239	chr12	-	3628	11	FSM	ENSMUSG00000021270.14	ENSMUST00000094361.11	3281	11	-150	-197	-150	197	multi-exon	FALSE	canonical	3	11114	junction_7	1521.95811046165	11068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTCTGGTCATGGTATT	NA	False	NA	0	True	NA	NA	NA	110662979	110656841	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041249	chr12	-	3427	7	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-20	0	intron_retention	FALSE	canonical	3	11114	junction_3	1766.59893738097	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	False	NA	-5	True	GATAAA	-21	NA	110662743	110657461	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_-_110658084_110658547_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041252	chr12	-	2810	10	ISM	ENSMUSG00000021270.14	ENSMUST00000021698.13	2852	11	513	0	-104	0	3prime_fragment	FALSE	canonical	3	11114	junction_7	1571.89128829643	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	False	NA	-5	True	GATAAA	-21	NA	110662210	110657461	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041271	chr12	-	2757	11	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	61	-2	combination_of_known_junctions	FALSE	canonical	3	25	junction_10	4149.70050124102	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGGAATGTGTCTTTT	NA	False	NA	-7	True	GATAAA	-19	NA	110669101	110657463	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110669056
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041278	chr12	-	2916	10	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-20	-3	intron_retention	FALSE	canonical	3	11114	junction_6	1479.99883216504	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGGAATGTGTCTTT	NA	False	NA	-8	True	GATAAA	-18	NA	110662743	110657464	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_-_110658084_110658547_110658882_110659037_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041290	chr12	+	2374	3	FSM	ENSMUSG00000037957.15	ENSMUST00000095410.8	2384	3	10	0	10	0	multi-exon	FALSE	canonical	3	142	junction_2	4	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTTTGTAGAACTCTGAT	5356	False	NA	19	True	AATAAA	-18	NA	110704435	110761462	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_110704712_110745729_110745913_110759547
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041294	chr12	+	2602	5	NIC	ENSMUSG00000037957.15	novel	960	3	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	61.3977809045246	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTGTTTATCCTTTTTT	5373	False	NA	NA	False	ATTAAA	-16	NA	110704452	110770673	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_110704712_110745729_110745913_110759547_110760808_110763376_110763442_110769838
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041301	chr12	+	234	1	Intergenic	novelGene_1328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTCTATATGCTTCA	NA	False	NA	NA	False	AAAAAG	-36	NA	110733038	110733272	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_110733000_110733300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041306	chr12	-	1507	11	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	80	junction_10	69.6330381356436	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	7672	False	NA	-3	True	AATATA	-18	NA	110807361	110774231	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_-_110774556_110774638_110774840_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110807179
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041310	chr12	-	1672	12	FSM	ENSMUSG00000056458.17	ENSMUST00000070565.15	1693	12	21	0	9	0	multi-exon	FALSE	canonical	3	80	junction_11	66.0974737267458	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	7681	False	NA	-3	True	AATATA	-18	NA	110807352	110774231	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110807179
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041311	chr12	-	1223	8	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_7	79.9971938283348	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	7680	False	NA	-3	True	AATATA	-18	NA	110807353	110774231	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_-_110774556_110774638_110774840_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110807179
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041312	chr12	-	1469	11	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1836	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_10	69.773992289391	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	9508	False	NA	-3	True	AATATA	-18	NA	110805525	110774231	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110805381
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041330	chr12	+	271	1	Intergenic	novelGene_1329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCTGAACAGTTTTAC	NA	False	NA	NA	False	NA	NA	NA	110796957	110797228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_110797000_110797200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041338	chr12	+	191	1	Intergenic	novelGene_1330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGATAGCATGGCAAAG	NA	False	NA	NA	False	NA	NA	NA	110804522	110804713	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_110804500_110804700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041347	chr12	+	3489	7	FSM	ENSMUSG00000021271.6	ENSMUST00000222460.2	2385	7	-23	-1081	4	-2	multi-exon	FALSE	canonical	3	41	junction_4	9.97914491994847	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTGCTTTCTTGATGT	NA	False	NA	11	True	AGTAAA	-14	NA	110816716	110836428	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_110816998_110821433_110822307_110830397_110830491_110831289_110831440_110832673_110832803_110833141_110833260_110834583
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041352	chr12	-	1477	5	FSM	ENSMUSG00000021276.11	ENSMUST00000043716.9	2029	5	12	540	0	12	multi-exon	FALSE	canonical	3	237	junction_1	85.0951673128386	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTTGAGTTAACTGAGT	3361	False	NA	2	True	NA	NA	NA	110855567	110839583	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_110840564_110843274_110843405_110846118_110846249_110850323_110850493_110855499
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041359	chr12	-	1308	4	FSM	ENSMUSG00000021276.11	ENSMUST00000221102.2	536	4	13	-785	-7	0	multi-exon	FALSE	canonical	2	10	junction_1	203.882318997995	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATATTAATCCTGTTG	3388	False	NA	-10	True	NA	NA	NA	110855540	110839595	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_110840564_110846118_110846249_110850323_110850493_110855499
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041374	chr12	+	529	1	FSM	ENSMUSG00000096942.2	ENSMUST00000181233.2	438	1	-36	-55	-36	55	mono-exon	FALSE	NA	NA	NA	NA	NA	2132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCCAAGGAAAATCTAGG	NA	False	NA	NA	False	AATAAA	-32	NA	110864511	110865040	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_110864500_110865000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041384	chr12	+	199	1	Intergenic	novelGene_1331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAATTCTTCAGACAGAG	NA	False	NA	NA	False	NA	NA	NA	110865326	110865525	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_110865300_110865500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041390	chr12	-	1458	3	FSM	ENSMUSG00000037904.15	ENSMUST00000128353.8	2577	3	45	1074	0	0	multi-exon	FALSE	canonical	3	78	junction_1	17	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGGATCTGCCTGGTCT	NA	False	NA	-7	True	NA	NA	NA	110945429	110942860	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_110943983_110944381_110944562_110945273
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041392	chr12	-	1583	4	NNC	ENSMUSG00000037904.15	novel	1563	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	38.9386982604994	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGGATCTGCCTGGTCT	NA	False	NA	-7	True	NA	NA	NA	110945429	110942860	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr12_-_110943983_110944079_110944205_110944381_110944562_110945273
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041412	chr12	-	206	1	Intergenic	novelGene_1332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGACATGTGCCCAGGCC	NA	False	NA	NA	False	TATAAA	-5	NA	111029288	111029082	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_111029100_111029300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041421	chr12	-	182	1	Intergenic	novelGene_1333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATTAACTAAGAAAATGCC	NA	False	NA	NA	False	NA	NA	NA	111105029	111104847	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_111104800_111105000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041423	chr12	+	198	1	Intergenic	novelGene_1334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAAGGCTCTGAGGGCTG	NA	False	NA	NA	False	NA	NA	NA	111108760	111108958	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_111108800_111109000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041434	chr12	+	204	1	Intergenic	novelGene_1335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTGAGGCAGGAGGATT	861	False	NA	NA	False	NA	NA	NA	111161128	111161332	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_111161100_111161300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041443	chr12	+	192	1	Intergenic	novelGene_1336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAACTACAACCTCACAA	NA	False	NA	NA	False	NA	NA	NA	111244600	111244792	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_111244600_111244800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041459	chr12	-	185	1	Antisense	novelGene_ENSMUSG00000021280.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTAAAGTCATTATTAGAG	NA	False	NA	NA	False	NA	NA	NA	111391489	111391304	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr12_-_111391300_111391500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041487	chr12	+	3805	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-1	3	intron_retention	FALSE	canonical	3	2160	junction_7	92.3556170462847	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTGCTTTAATATT	NA	False	NA	NA	False	ATTAAA	-18	NA	111504648	111513025	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041492	chr12	+	3718	12	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	20	junction_4	672.965940464147	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTGCTTTAATATT	NA	False	NA	NA	False	ATTAAA	-18	NA	111504649	111513025	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506346_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041510	chr12	+	183	1	Intergenic	novelGene_1337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGCTACAGTGTACTTAT	NA	False	NA	16	True	NA	NA	NA	111520311	111520494	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_111520300_111520500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041523	chr12	+	191	1	Intergenic	novelGene_1338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAAAGTTCTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	111529889	111530080	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_111529900_111530100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041544	chr12	+	3353	16	FSM	ENSMUSG00000007411.17	ENSMUST00000075281.8	3321	16	-27	-5	-27	2	multi-exon	FALSE	canonical	3	91	junction_15	105.235101875119	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	709	False	NA	NA	False	ATTAAA	-23	NA	111540929	111622657	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111621703
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041558	chr12	+	3355	17	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-2	2	combination_of_known_splicesites	FALSE	canonical	3	38	junction_16	115.676272415738	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	734	False	NA	NA	False	ATTAAA	-23	NA	111540954	111622657	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111621703
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041572	chr12	+	177	1	Intergenic	novelGene_1339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATTTGTGTTGATT	NA	False	NA	NA	False	NA	NA	NA	111572559	111572736	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_111572600_111572700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041577	chr12	+	187	1	Intergenic	novelGene_1340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGCAAATAATGC	NA	False	NA	NA	False	NA	NA	NA	111573501	111573688	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_111573500_111573700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041583	chr12	+	188	1	Intergenic	novelGene_1341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGATCAGTACTGTCCC	8393	False	NA	NA	False	NA	NA	NA	111582909	111583097	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_111582900_111583100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041590	chr12	-	1479	8	FSM	ENSMUSG00000001270.10	ENSMUST00000001304.9	1472	8	0	-7	0	7	multi-exon	FALSE	canonical	3	7551	junction_6	311.265160273359	2917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGCTTCTCCTTTCCTA	NA	False	NA	-1	True	AATAAA	-28	NA	111638772	111635787	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637648_111637782_111637858_111638014_111638199_111638408_111638663
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041599	chr12	-	2097	6	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-16	0	intron_retention	FALSE	canonical	3	7551	junction_4	360.822726556962	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638733	111635794	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_-_111636176_111636258_111636449_111636595_111637479_111637648_111638014_111638199_111638408_111638663
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041600	chr12	-	1511	7	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-17	0	intron_retention	FALSE	canonical	3	7551	junction_5	335.592345297419	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638734	111635794	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637648_111638014_111638199_111638408_111638663
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041605	chr12	-	1681	6	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-17	0	intron_retention	FALSE	canonical	3	7551	junction_4	349.982056682911	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638734	111635794	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111638014_111638199_111638408_111638663
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041620	chr12	-	1604	7	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-17	0	intron_retention	FALSE	canonical	3	7551	junction_5	321.637477086652	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638734	111635794	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637782_111637858_111638014_111638199_111638408_111638663
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041633	chr12	-	2268	5	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-17	0	intron_retention	FALSE	canonical	3	7551	junction_3	376.663643055711	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638734	111635794	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_-_111636176_111636258_111636449_111636595_111638014_111638199_111638408_111638663
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041655	chr12	-	2940	1	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-17	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638734	111635794	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_-_111635800_111638700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041665	chr12	+	1986	4	NIC	ENSMUSG00000060950.13	novel	2131	4	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	70.7153920067383	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGTCTTGTTCCCACA	NA	False	NA	5	True	AATAAA	-17	NA	111644544	111650336	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_111644596_111645036_111645397_111647235_111647503_111649028
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041669	chr12	+	2427	3	FSM	ENSMUSG00000060950.13	ENSMUST00000084947.10	2433	3	6	0	-5	0	multi-exon	FALSE	canonical	3	213	junction_2	1	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGTCTTGTTCCCACA	NA	False	NA	5	True	AATAAA	-17	NA	111644544	111650336	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_111645397_111647235_111647503_111649028
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041683	chr12	-	2124	2	FSM	ENSMUSG00000049792.7	ENSMUST00000054636.7	2139	2	15	0	15	0	multi-exon	FALSE	canonical	3	159	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCCCCCTGTGCTGTTC	NA	False	NA	NA	False	CATAAA	-20	NA	111679676	111675921	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_111677847_111679477
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041688	chr12	+	1075	5	FSM	ENSMUSG00000037787.15	ENSMUST00000040519.12	1065	5	-1	-9	-1	9	multi-exon	FALSE	canonical	3	492	junction_3	10.0343161201947	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAGAATAAGCCTTCAGC	1540	False	NA	NA	False	TTTAAA	-10	NA	111679693	111700663	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_111679853_111689045_111689244_111690773_111690838_111696455_111696547_111700100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041698	chr12	+	189	1	Intergenic	novelGene_1342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGCCATCGTTGTCAC	NA	False	NA	NA	False	NA	NA	NA	111689716	111689905	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_111689700_111689900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041702	chr12	-	203	1	Intergenic	novelGene_1343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTGAGATGGCTCAG	3543	False	NA	NA	False	NA	NA	NA	111709658	111709455	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_111709500_111709700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041713	chr12	+	2415	15	NIC	ENSMUSG00000021288.20	novel	2272	14	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	2	31	junction_13	41.916157811926	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTGTGTCTGTCT	NA	False	NA	11	True	AATAAA	-15	NA	111725297	111761331	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755894_111760082_111760134_111760770
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041725	chr12	+	2264	15	NIC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	21	3	combination_of_known_junctions	FALSE	canonical	2	27	junction_13	36.2404808050278	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGAATGAAAGCCTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	111725303	111773148	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755894_111772441_111772509_111772748
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041745	chr12	-	2463	8	FSM	ENSMUSG00000021287.13	ENSMUST00000021715.6	2422	8	-40	-1	-8	0	multi-exon	FALSE	canonical	3	57	junction_7	12.8809303758284	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACACTTGCAAATTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	111780315	111769625	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_111771107_111771177_111771225_111771348_111771562_111774266_111774422_111776185_111776399_111777291_111777430_111778494_111778654_111780258
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041756	chr12	+	1304	7	FSM	ENSMUSG00000021286.9	ENSMUST00000021714.9	1308	7	6	-2	6	2	multi-exon	FALSE	canonical	3	470	junction_5	111.029525602677	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGCTCTGGCCTCACT	NA	False	NA	18	True	ATTAAA	-19	NA	111780609	111794822	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111793976_111794120_111794251
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041764	chr12	+	1348	8	FSM	ENSMUSG00000021286.9	ENSMUST00000223211.2	794	8	-22	-532	16	2	multi-exon	FALSE	canonical	3	188	junction_5	258.732309855699	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGCTCTGGCCTCACT	NA	False	NA	18	True	ATTAAA	-19	NA	111780619	111794822	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111792012_111792067_111793976_111794120_111794251
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041795	chr12	+	196	1	Intergenic	novelGene_1344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAGAGAATATTTACCCC	NA	False	NA	NA	False	NA	NA	NA	111844506	111844702	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_111844500_111844700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041820	chr12	+	1796	13	FSM	ENSMUSG00000011148.15	ENSMUST00000021726.8	1777	13	0	-19	0	-2	multi-exon	FALSE	canonical	3	62	junction_2	10.1005362893924	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTCTTGACTTCGTCC	NA	False	NA	NA	False	AATAAA	-38	NA	112586478	112607792	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_112586745_112594734_112594838_112598687_112598751_112599128_112599180_112599502_112599570_112600577_112600686_112600813_112600896_112601034_112601162_112601864_112602020_112602827_112602953_112604618_112604717_112606045_112606196_112607391
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041824	chr12	+	196	1	Intergenic	novelGene_1345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACAATATCCAGCAAGC	4199	False	NA	NA	False	NA	NA	NA	112608456	112608652	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_112608500_112608700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041848	chr12	-	2679	14	FSM	ENSMUSG00000001729.15	ENSMUST00000001780.10	2690	14	7	4	7	-4	multi-exon	TRUE	canonical	3	224	junction_13	42.5045768506691	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTTTGCTTTCTGGT	NA	False	NA	-4	True	AATAAA	-15	NA	112640703	112620258	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640433
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041859	chr12	+	178	1	Intergenic	novelGene_1346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGGGAAACACT	NA	False	NA	NA	False	NA	NA	NA	112715889	112716067	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_112715900_112716100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041869	chr12	-	2100	2	FSM	ENSMUSG00000047832.10	ENSMUST00000220899.2	1994	2	-98	-8	-98	0	multi-exon	FALSE	canonical	3	463	junction_1	0	228	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTAGGAGCCTTTTTTT	9514	False	NA	0	True	ATTAAA	-19	NA	112793141	112783848	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_112785733_112792925
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041880	chr12	-	828	5	FSM	ENSMUSG00000002804.5	ENSMUST00000221397.2	1241	5	-22	435	-22	3	multi-exon	FALSE	canonical	3	180	junction_2	18.0277563773199	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGCTGGCTTTGAGCACT	8825	False	NA	-3	True	AATAAA	-22	NA	112905766	112898345	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_-_112898671_112901975_112902214_112902414_112902480_112902898_112902943_112905610
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041903	chr12	+	167	1	Intergenic	novelGene_1347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	112966433	112966600	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_112966400_112966600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041913	chr12	+	2866	20	FSM	ENSMUSG00000021144.15	ENSMUST00000109727.9	2789	20	-72	-5	-72	4	multi-exon	FALSE	canonical	3	192	junction_4	117.588629860953	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTGCGTCTTTTGTT	9251	False	NA	28	True	ATTAAA	-45	NA	113061825	113100830	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041914	chr12	+	2815	19	NIC	ENSMUSG00000021144.15	novel	2775	20	NA	NA	-72	4	combination_of_known_junctions	FALSE	canonical	3	225	junction_3	92.1761598486531	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTGCGTCTTTTGTT	9251	False	NA	28	True	ATTAAA	-45	NA	113061825	113100830	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041932	chr12	+	2816	20	FSM	ENSMUSG00000021144.15	ENSMUST00000109726.8	2775	20	-41	0	-41	0	multi-exon	FALSE	canonical	3	59	junction_16	163.105730200924	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCCCTTCTGCGTCTTT	9282	False	NA	24	True	ATTAAA	-41	NA	113061856	113100826	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_113062066_113075765_113075834_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113097160_113097197_113099416_113099449_113099900_113100053_113100137
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041934	chr12	+	2867	21	NIC	ENSMUSG00000021144.15	novel	2826	21	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_17	171.479699964748	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCCCTTCTGCGTCTTT	9282	False	NA	24	True	ATTAAA	-41	NA	113061856	113100826	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113097160_113097197_113099416_113099449_113099900_113100053_113100137
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041949	chr12	+	1189	7	FSM	ENSMUSG00000006356.11	ENSMUST00000084882.9	1439	7	252	-2	-84	2	multi-exon	FALSE	canonical	3	743	junction_5	14.1745076340121	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTGTCGTGTGTGTGTG	5874	False	NA	32	True	AATAAA	-25	NA	113104107	113109128	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_113104235_113107078_113107232_113107634_113107776_113107848_113107918_113108018_113108114_113108429_113108488_113108582
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041959	chr12	+	409	5	FSM	ENSMUSG00000006360.12	ENSMUST00000006523.12	445	5	38	-2	-3	0	multi-exon	FALSE	canonical	3	402	junction_4	13.838352503098	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGTGTTTTTGTCTGCT	NA	False	NA	15	True	AATAAA	-15	NA	113115669	113117499	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_113115774_113116900_113116996_113117074_113117133_113117237_113117285_113117394
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041974	chr12	+	3153	7	NIC	ENSMUSG00000037466.14	novel	2441	8	NA	NA	-11	-600	intron_retention	FALSE	canonical	3	28	junction_2	73.0032343271325	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCGGAACGCTTGAGTG	NA	False	NA	NA	False	TTTAAA	-26	NA	113120029	113129068	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_113120192_113120294_113120374_113121197_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041975	chr12	+	3977	6	NIC	ENSMUSG00000037466.14	novel	4000	9	NA	NA	-11	-600	intron_retention	FALSE	canonical	3	190	junction_4	20.4117613154769	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCGGAACGCTTGAGTG	NA	False	NA	NA	False	TTTAAA	-26	NA	113120029	113129068	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_113120192_113120294_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041976	chr12	+	3463	8	ISM	ENSMUSG00000037466.14	ENSMUST00000196755.5	4000	9	-30	600	-11	-600	intron_retention	FALSE	canonical	3	15	junction_3	72.3201499005129	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCGGAACGCTTGAGTG	NA	False	NA	NA	False	TTTAAA	-26	NA	113120029	113129068	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr12_+_113120192_113120294_113120374_113120780_113120984_113121090_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000041979	chr12	+	3356	8	FSM	ENSMUSG00000037466.14	ENSMUST00000049271.13	2441	8	-11	-904	-11	-600	multi-exon	FALSE	canonical	3	152	junction_3	28.4088230043027	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCGGAACGCTTGAGTG	NA	False	NA	NA	False	TTTAAA	-26	NA	113120029	113129068	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_113120192_113120294_113120374_113120780_113120984_113121197_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042006	chr12	+	1601	2	FSM	ENSMUSG00000049036.8	ENSMUST00000058491.8	1574	2	-27	0	-27	0	multi-exon	FALSE	canonical	3	28	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTATTATTCCTGTC	825	False	NA	19	True	TTTAAA	-29	NA	113149522	113153143	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_113149579_113151598
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042008	chr12	+	197	1	Intergenic	novelGene_1348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATAAATAAACTCCTCAT	NA	False	NA	NA	False	NA	NA	NA	115936817	115937014	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_115936800_115937000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042023	chr12	+	188	1	Intergenic	novelGene_1349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGCATGATAAAATCAG	NA	False	NA	NA	False	NA	NA	NA	116036218	116036406	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_116036200_116036400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042030	chr12	+	5561	22	FSM	ENSMUSG00000021171.9	ENSMUST00000100986.4	5560	22	6	-7	6	7	multi-exon	FALSE	canonical	3	167	junction_13	20.3537869692824	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTTTTGTTTGTCTCT	NA	False	NA	12	True	AATAAA	-25	NA	116244821	116336718	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042044	chr12	+	6657	29	FSM	ENSMUSG00000042029.8	ENSMUST00000084828.5	4684	29	-52	-1921	-52	-199	multi-exon	FALSE	canonical	3	123	junction_1	40.0130559050061	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTGCCAAGAATAATAT	NA	False	NA	16	True	AATAAA	-21	NA	116368969	116427152	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_116369082_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042058	chr12	+	6453	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-24	-199	combination_of_known_junctions	FALSE	canonical	3	91	junction_1	42.7865791811485	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTGCCAAGAATAATAT	NA	False	NA	16	True	AATAAA	-21	NA	116368997	116427152	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_116369082_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042069	chr12	+	6456	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	3	-199	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	49.3771077062245	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTGCCAAGAATAATAT	NA	False	NA	16	True	AATAAA	-21	NA	116369024	116427152	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_116369112_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042080	chr12	-	187	1	Intergenic	novelGene_1350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAAATAAATTTTCAA	5620	False	NA	NA	False	NA	NA	NA	116751595	116751408	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_116751400_116751600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042095	chr12	+	2742	10	NIC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-150	7	combination_of_known_junctions	FALSE	canonical	3	109	junction_2	33.9643967547428	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACCTGTCTGTGGCATCC	NA	False	NA	21	True	AATAAA	-21	NA	117807468	117842448	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr12_+_117807693_117828764_117828900_117833743_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042112	chr12	-	205	1	Intergenic	novelGene_1351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAAAATATTTCAATATTA	NA	False	NA	NA	False	NA	NA	NA	118353881	118353676	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_118353700_118353900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042119	chr12	-	186	1	Intergenic	novelGene_1352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATAAAATAAAGCAGGCCT	NA	False	NA	NA	False	NA	NA	NA	118639808	118639622	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_118639600_118639800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042120	chr12	+	183	1	Intergenic	novelGene_1353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTCTTATTATTTTACA	NA	False	NA	NA	False	NA	NA	NA	118839909	118840092	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_118839900_118840100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042127	chr12	-	177	1	Intergenic	novelGene_1354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAATTAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	118880417	118880240	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_118880200_118880400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042134	chr12	+	3359	1	FSM	ENSMUSG00000021908.11	ENSMUST00000022467.11	1878	1	-15	-1466	-15	1466	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACCAGCAAATTCAGTAT	NA	False	NA	NA	False	NA	NA	NA	119224697	119228056	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr12_+_119224700_119228100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042138	chr12	+	185	1	Intergenic	novelGene_1355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTATGAGGACAGGTGC	NA	False	NA	NA	False	NA	NA	NA	119257226	119257411	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_+_119257200_119257400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042144	chr12	-	189	1	Intergenic	novelGene_1356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGAAGAGATGGAC	NA	False	NA	NA	False	AATAAA	-9	NA	119932597	119932408	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr12_-_119932400_119932600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042145	chr13	+	187	1	Intergenic	novelGene_1357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAACTTGGCATGTTAGT	NA	False	NA	NA	False	NA	NA	NA	3583222	3583409	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_3583200_3583400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042177	chr13	+	2392	6	FSM	ENSMUSG00000033781.8	ENSMUST00000042288.8	4453	6	13	2048	13	1288	multi-exon	FALSE	canonical	3	52	junction_4	6.61513416341649	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCCCTGTGTCTTATT	NA	False	NA	6	True	AATAAA	-15	NA	3684044	3701774	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_3684176_3692064_3692253_3693474_3693626_3694915_3695051_3699318_3699511_3700179
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042188	chr13	-	3452	12	FSM	ENSMUSG00000021215.16	ENSMUST00000091853.12	2680	12	0	-772	0	129	multi-exon	FALSE	canonical	3	132	junction_9	26.5501241222916	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTCTCCTGGTGGTTA	NA	False	NA	-1	True	ATTAAA	-29	NA	3968220	3932560	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_3934474_3934802_3934990_3936047_3936219_3936537_3936796_3937370_3937448_3937570_3937668_3937977_3938041_3938354_3938523_3938870_3938979_3957796_3957857_3962867_3962935_3967937
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042189	chr13	-	3293	10	FSM	ENSMUSG00000021215.16	ENSMUST00000099946.6	3871	10	35	543	0	129	multi-exon	FALSE	canonical	3	47	junction_9	50.6888353061239	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTCTCCTGGTGGTTA	NA	False	NA	-1	True	ATTAAA	-29	NA	3943543	3932560	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_3934474_3934802_3934990_3936047_3936219_3936537_3936796_3937370_3937448_3937570_3937668_3937977_3938041_3938354_3938523_3938870_3938979_3943292
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042233	chr13	+	3560	27	FSM	ENSMUSG00000021193.11	ENSMUST00000222485.2	3906	27	9	337	1	136	multi-exon	TRUE	canonical	3	407	junction_1	134.848435629472	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTGCTGCTCTTGCAAG	NA	False	NA	NA	False	NA	NA	NA	6598195	6630214	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042237	chr13	+	3557	27	NIC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	1	136	combination_of_known_junctions	FALSE	canonical	3	577	junction_1	112.248614598533	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTGCTGCTCTTGCAAG	NA	False	NA	NA	False	NA	NA	NA	6598195	6630214	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042249	chr13	-	2770	22	FSM	ENSMUSG00000021196.15	ENSMUST00000138703.8	4145	22	-24	1399	-24	15	multi-exon	FALSE	canonical	3	963	junction_15	143.890705562911	780	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTTATTGTTTTAAGT	NA	False	NA	1	True	ATTAAA	-25	NA	6698837	6631202	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042295	chr13	-	4494	14	FSM	ENSMUSG00000021147.18	ENSMUST00000021572.11	4526	14	32	0	-5	0	multi-exon	FALSE	canonical	3	54	junction_4	12.9902102419544	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTATTATAAAGGTTTGT	NA	False	NA	-29	True	ATTAAA	-18	NA	8921048	8853030	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042328	chr13	-	187	1	Intergenic	novelGene_1358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTATAAGGATAAGAAGAC	NA	False	NA	NA	False	NA	NA	NA	9051261	9051074	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_9051100_9051300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042331	chr13	+	149	1	Intergenic	novelGene_1359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGGGGGAACCCTT	NA	False	NA	NA	False	NA	NA	NA	9058691	9058840	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_9058700_9058800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042341	chr13	+	6055	18	FSM	ENSMUSG00000033499.15	ENSMUST00000188211.8	5610	18	18	-463	-8	0	multi-exon	FALSE	canonical	0	0	junction_12	74.6898546956926	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAAAGATTTTTTTG	NA	False	NA	11	True	ATTAAA	-19	NA	9143934	9224487	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042347	chr13	+	5797	17	FSM	ENSMUSG00000033499.15	ENSMUST00000091829.4	5720	17	-77	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_12	76.8002431229876	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAAAGATTTTTTTG	NA	False	NA	11	True	ATTAAA	-19	NA	9143940	9224487	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042355	chr13	+	176	1	Intergenic	novelGene_1360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAGAAGGTATCTGA	NA	False	NA	NA	False	NA	NA	NA	9159984	9160160	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_9160000_9160200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042359	chr13	+	203	1	Intergenic	novelGene_1361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGCTTGTCAGGAAACA	NA	False	NA	NA	False	NA	NA	NA	9303895	9304098	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_9303900_9304100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042369	chr13	+	7486	36	ISM	ENSMUSG00000048264.17	ENSMUST00000174552.8	8023	37	216575	0	-117703	0	3prime_fragment	TRUE	canonical	3	37	junction_1	7.0475933075463	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGTTTCTTAATTGATA	6320	False	NA	26	True	AATAAA	-27	NA	9543138	9718964	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr13_+_9543213_9556614_9556726_9583287_9583414_9586691_9586902_9600219_9600355_9601781_9601902_9603309_9603508_9610706_9610799_9613149_9613261_9617866_9617991_9618336_9618447_9618626_9618730_9621085_9621151_9625169_9625264_9625397_9625518_9626839_9626955_9651392_9651533_9654524_9654662_9656358_9656568_9658979_9659095_9660732_9660935_9664382_9664493_9665780_9665862_9671914_9672039_9672617_9672740_9673792_9673905_9673993_9674104_9678008_9678140_9684757_9684927_9687130_9687302_9697014_9697077_9704638_9704697_9706672_9706748_9709280_9709456_9712172_9712297_9715813
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042372	chr13	+	7654	37	NIC	ENSMUSG00000048264.17	novel	8023	37	NA	NA	-117703	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	10.9948079778201	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGTTTCTTAATTGATA	6320	False	NA	26	True	AATAAA	-27	NA	9543138	9718964	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_+_9543213_9544869_9545038_9556614_9556726_9583287_9583414_9586691_9586902_9600219_9600355_9601781_9601902_9603309_9603508_9610706_9610799_9613149_9613261_9617866_9617991_9618336_9618447_9618626_9618730_9621085_9621151_9625169_9625264_9625397_9625518_9626839_9626955_9651392_9651533_9654524_9654662_9656358_9656568_9658979_9659095_9660732_9660935_9664382_9664493_9665780_9665862_9671914_9672039_9672617_9672740_9673792_9673905_9673993_9674104_9678008_9678140_9684757_9684927_9687130_9687302_9697014_9697077_9704638_9704697_9706672_9706748_9709280_9709456_9712172_9712297_9715813
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042392	chr13	+	190	1	Intergenic	novelGene_1362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCATTACTTATACCTGAC	NA	False	NA	NA	False	NA	NA	NA	9797824	9798014	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_9797800_9798000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042397	chr13	+	128	1	Intergenic	novelGene_1363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAACAATCTATTTAGTAG	NA	False	NA	NA	False	NA	NA	NA	10928248	10928376	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_10928200_10928400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042414	chr13	-	4556	33	FSM	ENSMUSG00000021311.10	ENSMUST00000099856.6	8294	33	-85	3823	-67	3	multi-exon	FALSE	canonical	3	145	junction_5	17.0824917221552	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGAATACAAGGAGAATAT	5876	False	NA	49	True	ATTAAA	-18	NA	12273066	12201420	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042420	chr13	+	176	1	Intergenic	novelGene_1364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAATATCTAGCTTC	NA	False	NA	NA	False	NA	NA	NA	12250979	12251155	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_12251000_12251200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042427	chr13	-	1075	7	ISM	ENSMUSG00000052374.17	ENSMUST00000168193.8	2920	22	61765	-9	3593	0	3prime_fragment	FALSE	canonical	3	42	junction_5	11.7473401244707	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGACAAACTTTATTAAG	NA	False	NA	3	True	AATAAA	-29	NA	12293840	12284311	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr13_-_12284539_12285663_12285823_12287584_12287651_12289963_12290111_12291248_12291429_12292284_12292420_12293679
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042442	chr13	+	6782	45	FSM	ENSMUSG00000050244.10	ENSMUST00000059270.10	6780	45	2	-4	2	4	multi-exon	TRUE	canonical	3	181	junction_14	60.7064258923889	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTATTTGTCTTTATCCT	1716	False	NA	9	True	AGTAAA	-23	NA	12410253	12453778	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12417807_12418025_12418160_12419768_12419872_12420903_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042458	chr13	+	4248	16	FSM	ENSMUSG00000057069.8	ENSMUST00000071973.8	4239	16	-9	0	0	0	multi-exon	TRUE	canonical	2	4	junction_15	21.5185707910374	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGTTTCTTTGTTTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	12580754	12624417	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_12581060_12589700_12589821_12594056_12594141_12595254_12595297_12596549_12596633_12598417_12598492_12605641_12605763_12605865_12605913_12608388_12608401_12610578_12610606_12614749_12614843_12614975_12615223_12616624_12616695_12617199_12617287_12619216_12619351_12621715
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042466	chr13	+	212	1	Intergenic	novelGene_1365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTAGATTTTCCATTTTT	NA	False	NA	NA	False	NA	NA	NA	12789104	12789316	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_12789100_12789300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042473	chr13	+	197	1	Intergenic	novelGene_1366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACCATCCATTTCATCT	NA	False	NA	NA	False	NA	NA	NA	12995994	12996191	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_12996000_12996200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042478	chr13	+	197	1	Intergenic	novelGene_1367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACCATCCATTTCATCT	NA	False	NA	NA	False	NA	NA	NA	13154093	13154290	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_13154100_13154300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042482	chr13	+	3558	11	NNC	ENSMUSG00000110123.2	novel	915	10	NA	NA	6	2637	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	25.4795996828836	63	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGTTTCTTTGTTTTT	7838	False	NA	NA	False	ATTAAA	-17	NA	13497954	13527649	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr13_+_13497977_13505226_13505348_13505450_13505498_13507966_13507979_13510200_13510228_13517810_13517904_13518036_13518284_13519905_13519976_13520480_13520568_13522598_13522733_13524951
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042493	chr13	-	2974	7	FSM	ENSMUSG00000021306.12	ENSMUST00000021738.10	2971	7	-3	0	-3	0	multi-exon	FALSE	canonical	3	25	junction_1	74.282680798869	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTCAACTGGTGCTGGA	NA	False	NA	NA	False	AATAAA	-19	NA	13568202	13532204	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_13534009_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042515	chr13	+	6080	20	FSM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	23	-12	23	12	multi-exon	TRUE	canonical	0	0	junction_7	184.261632008595	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGTTTTGTTCCACAA	NA	False	NA	24	True	ATTAAA	-39	NA	13612158	13686866	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042528	chr13	+	3744	12	FSM	ENSMUSG00000039242.11	ENSMUST00000099747.5	3892	12	148	0	-4	0	multi-exon	TRUE	canonical	3	178	junction_5	19.409889274617	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCTTTTCCTATTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	14129201	14173659	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042529	chr13	+	2390	13	NIC	ENSMUSG00000039242.11	novel	2439	13	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_12	55.6334107249312	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCTTTTCCTATTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	14129201	14173659	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477_14171610_14172963
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042548	chr13	-	1844	17	FSM	ENSMUSG00000039233.13	ENSMUST00000039894.13	1844	17	5	-5	5	2	multi-exon	FALSE	canonical	3	97	junction_4	17.0705109399221	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGCCCTTTCTGTTT	NA	False	NA	0	True	AATAAA	-19	NA	14214218	14172531	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_14172767_14172947_14173040_14174642_14174703_14175694_14175764_14178127_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184317_14185126_14185227_14189319_14189409_14194286_14194473_14202282_14202368_14203860_14203992_14214122
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042561	chr13	-	4186	4	FSM	ENSMUSG00000021302.11	ENSMUST00000170957.3	4244	4	60	-2	-10	2	multi-exon	FALSE	canonical	3	192	junction_3	35.1883819210577	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGTTAATTTGCTCAAC	NA	False	NA	-8	True	TATAAA	-3	NA	14238013	14225241	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_14229041_14229734_14229806_14232380_14232474_14237790
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042574	chr13	+	197	1	Antisense	novelGene_ENSMUSG00000021302.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGATAAATGGGATGAA	NA	False	NA	NA	False	NA	NA	NA	14228004	14228201	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr13_+_14228000_14228200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042581	chr13	+	215	1	Intergenic	novelGene_1368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGATTTTAGAGACTTAA	NA	False	NA	NA	False	AAGAAA	-29	NA	14231005	14231220	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_14231000_14231200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042591	chr13	+	5854	24	FSM	ENSMUSG00000039219.19	ENSMUST00000110534.8	5864	24	10	0	3	0	multi-exon	FALSE	canonical	3	31	junction_17	12.735494361632	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGATTTTGTTTGTAGA	1446	False	NA	4	True	AATAAA	-18	NA	14238386	14373947	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_14238618_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14317564_14317704_14319871_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693_14338935_14339351_14339528_14344503_14344765_14355804_14355890_14358891_14359091_14361401_14362617_14365727_14365842_14367950_14368167_14369914_14370062_14372190
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042598	chr13	-	174	1	Intergenic	novelGene_1369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGCTTCAATTTTA	NA	False	NA	-3	True	NA	NA	NA	14246736	14246562	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_14246600_14246700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042628	chr13	+	1945	2	FSM	ENSMUSG00000039182.7	ENSMUST00000178289.3	2035	2	90	0	-4	0	multi-exon	FALSE	canonical	3	36	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCCTGTTTTTCATTGT	NA	False	NA	10	True	ATTAAA	-17	NA	14804828	14812788	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_14804870_14810884
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042634	chr13	+	2017	2	FSM	ENSMUSG00000039182.7	ENSMUST00000038690.6	2914	2	7	890	7	3	multi-exon	FALSE	canonical	3	129	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGTTTTTCATTGTGTT	NA	False	NA	13	True	ATTAAA	-20	NA	14804839	14812791	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_14804950_14810884
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042646	chr13	+	240	1	Intergenic	novelGene_1370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAATTAGAGATGAA	NA	False	NA	NA	False	NA	NA	NA	17733652	17733892	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_17733700_17733900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042659	chr13	+	2672	2	FSM	ENSMUSG00000012429.10	ENSMUST00000049744.4	2672	2	6	-6	6	6	multi-exon	FALSE	canonical	3	374	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACAGTCTCTTAGAAAGT	NA	False	NA	NA	False	AATAAA	-24	NA	17870003	17873696	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_17870406_17871426
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042669	chr13	-	2683	5	FSM	ENSMUSG00000008859.9	ENSMUST00000009003.9	2688	5	1	4	1	-4	multi-exon	FALSE	canonical	3	817	junction_1	45.9292934846597	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGGTGTTCATTGAT	NA	False	NA	NA	False	AATAAA	-17	NA	18118823	18055159	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_18057087_18063091_18063267_18067706_18067916_18071537_18071688_18118601
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042687	chr13	-	176	1	FSM	ENSMUSG00000075054.6	ENSMUST00000222595.2	2749	1	1802	771	1577	-477	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAGAAAAAAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	18166111	18165935	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_18165900_18166100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042690	chr13	+	236	1	Intergenic	novelGene_1371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTTTATAAGGCAAATGA	8750	False	NA	NA	False	AATAAA	-25	NA	18726433	18726669	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_18726400_18726700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042696	chr13	+	199	1	Intergenic	novelGene_1372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACCAGCCTAAGGATGG	NA	False	NA	NA	False	NA	NA	NA	18738340	18738539	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_18738300_18738500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042706	chr13	+	3192	29	FSM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	7	0	7	0	multi-exon	TRUE	canonical	3	419	junction_25	60.5186237990473	232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTATTGTGTTGCAAGC	NA	False	NA	23	True	AATAAA	-22	NA	18901466	19050981	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042727	chr13	+	3216	21	FSM	ENSMUSG00000021314.14	ENSMUST00000003345.10	3367	21	149	2	3	-2	multi-exon	FALSE	canonical	3	40	junction_16	8.61669890387264	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGTTCTTTTTCAAGAG	NA	False	NA	17	True	AATAAA	-22	NA	19132523	19335089	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_19132672_19230122_19230204_19261500_19261556_19268374_19268470_19270692_19270789_19278922_19279031_19280176_19280263_19284062_19284139_19284741_19284825_19287041_19287181_19288400_19288530_19297272_19297390_19300406_19300431_19302321_19302346_19304765_19304799_19305444_19305490_19309195_19309319_19321705_19321913_19323341_19323603_19326134_19326237_19333905
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042728	chr13	+	3228	21	FSM	ENSMUSG00000021314.14	ENSMUST00000200466.5	3224	21	3	-7	3	-2	multi-exon	FALSE	canonical	3	27	junction_16	10.4957134107215	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGTTCTTTTTCAAGAG	NA	False	NA	17	True	AATAAA	-22	NA	19132523	19335089	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_19132672_19230122_19230204_19261500_19261556_19268374_19268470_19270692_19270789_19278922_19279031_19280176_19280263_19284062_19284139_19284741_19284825_19287041_19287181_19288400_19288530_19297272_19297390_19300406_19300431_19302321_19302346_19304765_19304799_19305444_19305502_19309195_19309319_19321705_19321913_19323341_19323603_19326134_19326237_19333905
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042735	chr13	-	1334	9	FSM	ENSMUSG00000003062.14	ENSMUST00000039694.13	1327	9	-6	-1	-6	1	multi-exon	FALSE	canonical	3	699	junction_8	60.3857392105123	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGTGTTGTCTGTATT	NA	False	NA	1	True	AATAAA	-20	NA	19579971	19541844	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042746	chr13	-	1414	10	FSM	ENSMUSG00000003062.14	ENSMUST00000197565.3	1391	10	-23	0	-2	0	multi-exon	FALSE	canonical	3	23	junction_9	324.011659598163	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTGTGTTGTCTGTAT	NA	False	NA	0	True	AATAAA	-19	NA	19579927	19541845	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19575142_19575268_19579873
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042754	chr13	-	1159	8	FSM	ENSMUSG00000003062.14	ENSMUST00000200323.3	1128	8	-28	-3	-3	3	multi-exon	FALSE	canonical	3	54	junction_1	267.855352374968	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATGCCCCTGCTTTGCC	NA	False	NA	0	True	AATAAA	-21	NA	19579932	19549122	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_19549516_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042762	chr13	+	142	1	Intergenic	novelGene_1373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTTTACAGTAGTATAT	NA	False	NA	NA	False	NA	NA	NA	19572167	19572309	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_19572200_19572300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042766	chr13	-	2334	3	FSM	ENSMUSG00000002808.8	ENSMUST00000002885.8	2363	3	20	9	4	-9	multi-exon	FALSE	canonical	3	59	junction_2	5.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTATCTTCAGAGCCTA	NA	False	NA	NA	False	AATAAA	-25	NA	19803954	19775884	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_19777519_19778616_19778826_19803463
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042781	chr13	+	189	1	Intergenic	novelGene_1374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTATTTGGGGTAGTGA	NA	False	NA	NA	False	NA	NA	NA	20217546	20217735	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_20217500_20217700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042794	chr13	+	2181	7	NIC	ENSMUSG00000041112.18	novel	3748	5	NA	NA	356	-1826	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	14.4308696896618	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGAGCTGGTGTTTTGAT	NA	False	NA	7	True	AATAAA	-17	NA	20657251	20790697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_+_20657458_20748593_20748758_20756514_20756628_20766388_20766497_20773813_20773897_20784349_20784428_20789268
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042803	chr13	+	226	1	Genic_Genomic	ENSMUSG00000060404.4	novel	NA	NA	NA	NA	3253	77	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAACACAGAAGCTAAC	7596	False	NA	NA	False	NA	NA	NA	21303116	21303342	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr13_+_21303100_21303300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042815	chr13	+	183	1	Intergenic	novelGene_1375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATTGATTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	21340258	21340441	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_21340300_21340400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042855	chr13	-	2549	6	FSM	ENSMUSG00000021327.20	ENSMUST00000070785.16	2561	6	6	6	6	-6	multi-exon	FALSE	canonical	3	51	junction_5	21.2452347598232	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCCTGTTGGTTCTTA	NA	False	NA	-4	True	AATAAA	-17	NA	21586877	21571178	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21580269_21580748_21586841
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042867	chr13	+	1925	1	FSM	ENSMUSG00000078139.4	ENSMUST00000104942.2	1924	1	-1	0	-1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTAGAATTTGAAGTAG	NA	False	NA	NA	False	TTTAAA	-27	NA	21679391	21681316	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_21679400_21681300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042878	chr13	+	464	1	FSM	ENSMUSG00000094248.2	ENSMUST00000091745.6	480	1	-31	47	-31	-47	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTTTTCAGAGCCATCC	NA	False	NA	NA	False	AAGAAA	-10	NA	21994603	21995067	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_21994600_21995100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042885	chr13	+	153	1	Intergenic	novelGene_1376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATTCTCCCCCTACTTGA	NA	False	NA	NA	False	NA	NA	NA	22105068	22105221	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_22105100_22105200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042893	chr13	+	2732	6	FSM	ENSMUSG00000006720.17	ENSMUST00000176511.8	2703	6	-29	0	-29	0	multi-exon	FALSE	canonical	3	28	junction_1	19.7949488506538	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTTAAGTTTCTTCTG	NA	False	NA	12	True	ATTAAA	-16	NA	22129234	22144655	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_22129370_22129725_22129970_22131172_22131241_22133829_22133957_22134403_22134500_22142593
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042901	chr13	+	2760	6	FSM	ENSMUSG00000006720.17	ENSMUST00000102978.8	3198	6	144	294	119	0	multi-exon	FALSE	canonical	3	46	junction_1	13.42236938845	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTTAAGTTTCTTCTG	NA	False	NA	12	True	ATTAAA	-16	NA	22129425	22144655	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_22129589_22129725_22129970_22131172_22131241_22133829_22133957_22134403_22134500_22142593
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042913	chr13	+	210	1	Intergenic	novelGene_1377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCCTAATATTTACATAC	NA	False	NA	NA	False	NA	NA	NA	22200082	22200292	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_22200100_22200300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042918	chr13	+	485	1	FSM	ENSMUSG00000062727.5	ENSMUST00000110455.4	476	1	-33	24	-33	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCAGTATTAGAGCTGCA	NA	False	NA	15	True	ACTAAA	-1	NA	22220006	22220491	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_22220000_22220500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042922	chr13	-	484	1	FSM	ENSMUSG00000069301.6	ENSMUST00000091741.6	485	1	-16	17	-16	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCCTAACAAGGGCTTA	NA	False	NA	2	True	NA	NA	NA	22227130	22226646	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_22226600_22227100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042927	chr13	+	204	1	Intergenic	novelGene_1378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTGGTGTCCAATCAAA	NA	False	NA	NA	False	TTTAAA	-3	NA	22974283	22974487	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_22974300_22974500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042934	chr13	-	4919	5	FSM	ENSMUSG00000046351.12	ENSMUST00000125328.2	815	5	-14	-4090	0	0	multi-exon	FALSE	canonical	3	71	junction_1	23.1124966197942	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTCTCCACTATACTA	9006	False	NA	0	True	AATAAA	-22	NA	23553378	23537272	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_23541884_23546749_23546825_23546972_23547046_23552289_23552376_23553304
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042942	chr13	+	174	1	Antisense	novelGene_ENSMUSG00000046351.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTAATGCTTC	3407	False	NA	NA	False	NA	NA	NA	23538826	23539000	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr13_+_23538800_23539000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042949	chr13	-	126	1	Intergenic	novelGene_1379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGATATCCTTCATGCC	2324	False	NA	NA	False	AATAAA	-40	NA	23571890	23571764	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_23571800_23571900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042975	chr13	+	191	1	Intergenic	novelGene_1380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGGGCTTGAATGTACAC	NA	False	NA	NA	False	NA	NA	NA	23724220	23724411	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_23724200_23724400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000042979	chr13	+	1616	2	FSM	ENSMUSG00000018102.6	ENSMUST00000018246.6	1156	2	1	-461	1	461	multi-exon	FALSE	canonical	3	53	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATATGAATCCAGATATT	184	False	NA	NA	False	AATGAA	-15	NA	23868182	23877352	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_23868605_23876158
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043006	chr13	+	89	1	Intergenic	novelGene_1381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGGCTACATTC	4506	False	NA	NA	False	NA	NA	NA	24948106	24948195	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_24948100_24948200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043009	chr13	+	182	1	Intergenic	novelGene_1382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAGACCATGCCATATT	NA	False	NA	3	True	NA	NA	NA	24960677	24960859	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_24960700_24960900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043018	chr13	+	4155	5	FSM	ENSMUSG00000019132.12	ENSMUST00000019276.12	5849	5	-519	2213	-519	1324	multi-exon	FALSE	canonical	3	109	junction_1	16.0370664399696	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGGCTACTCAGATGGAT	NA	False	NA	112	True	AATAAA	-14	NA	24985120	24997967	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_24987493_24988764_24988942_24989844_24989968_24993868_24994004_24996619
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043029	chr13	-	692	3	FSM	ENSMUSG00000006717.8	ENSMUST00000006900.7	721	3	26	3	26	-3	multi-exon	FALSE	canonical	3	260	junction_1	3	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCTAAGGAAGTATTTTC	4843	False	NA	-6	True	AATAAA	-16	NA	25015474	25001933	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_25002175_25004697_25004883_25015208
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043035	chr13	+	1995	7	FSM	ENSMUSG00000035958.4	ENSMUST00000038039.3	1957	7	-38	0	-38	0	multi-exon	FALSE	canonical	3	768	junction_5	64.0791611125559	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGACTTTTTTCTTCATG	NA	False	NA	21	True	AATAAA	-21	NA	25015623	25026136	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_25015913_25015992_25016079_25019998_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043062	chr13	-	6991	11	FSM	ENSMUSG00000021339.5	ENSMUST00000021772.4	7035	11	44	0	44	0	multi-exon	FALSE	canonical	3	167	junction_5	19.2792634714089	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCTGGACATTGTCATT	NA	False	NA	1	True	AATAAA	-17	NA	25204318	25171465	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043073	chr13	+	201	1	Intergenic	novelGene_1383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATATATTTGAGTGGGAA	NA	False	NA	NA	False	NA	NA	NA	25786348	25786549	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_25786300_25786500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043084	chr13	+	190	1	Intergenic	novelGene_1384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAGCCATTTCAGCTTCG	NA	False	NA	NA	False	NA	NA	NA	28987450	28987640	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_28987400_28987600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043091	chr13	-	4821	1	FSM	ENSMUSG00000076431.5	ENSMUST00000067230.6	4795	1	-26	0	-26	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGACTTTTGTCATCCTT	NA	False	NA	0	True	AATAAA	-24	NA	29137722	29132901	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_29132900_29137700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043099	chr13	+	185	1	Intergenic	novelGene_1385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACCAAGTAACATAAAAGCA	3106	False	NA	NA	False	NA	NA	NA	29155103	29155288	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_29155100_29155300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043102	chr13	-	2629	16	FSM	ENSMUSG00000006191.18	ENSMUST00000006353.14	2629	16	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_3	17.6728291138937	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGTTTATTGGACTTT	NA	False	NA	NA	False	AATAAA	-23	NA	30039657	29509283	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_29510212_29538612_29538778_29541482_29541567_29627990_29628054_29658511_29658693_29701395_29701542_29736211_29736379_29809603_29809708_29875581_29875703_29893077_29893127_29901703_29901801_29961199_29961285_30030210_30030324_30033921_30034092_30038880_30038925_30039545
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043115	chr13	+	178	1	Intergenic	novelGene_1386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAGGAAAGGAAAG	NA	False	NA	NA	False	NA	NA	NA	30046166	30046344	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_30046200_30046300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043135	chr13	+	3180	7	FSM	ENSMUSG00000069255.14	ENSMUST00000095914.7	3015	7	-165	0	-63	0	multi-exon	FALSE	canonical	3	22	junction_6	5.61001089323561	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCATGTGCAGTGTGTTCT	NA	False	NA	9	True	AATAAA	-22	NA	30843918	30895214	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_30844130_30852787_30852822_30856375_30856459_30880218_30880269_30889608_30889684_30891912_30892085_30892659
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043142	chr13	-	4296	28	FSM	ENSMUSG00000021357.15	ENSMUST00000021785.8	4256	28	-39	-1	0	1	multi-exon	FALSE	canonical	3	102	junction_19	19.2909994862811	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTTTGTGTCTTCAT	NA	False	NA	-1	True	AATAAA	-21	NA	31158076	30997900	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31157978
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043143	chr13	-	4289	29	NIC	ENSMUSG00000021357.15	novel	4375	29	NA	NA	27	1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_28	35.6224533640437	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTTTGTGTCTTCAT	NA	False	NA	-1	True	AATAAA	-21	NA	31158010	30997900	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31130347_31130407_31157978
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043157	chr13	+	196	1	Intergenic	novelGene_1387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAGATCAACCTGAATAG	NA	False	NA	NA	False	NA	NA	NA	31155458	31155654	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_31155500_31155700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043167	chr13	-	1678	11	FSM	ENSMUSG00000038372.15	ENSMUST00000041859.9	1713	11	31	4	31	-4	multi-exon	FALSE	canonical	3	65	junction_5	9.43186089804128	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACAGAGTTTGCTGTGTA	NA	False	NA	-8	True	ATTAAA	-22	NA	32522692	32003565	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_32003962_32004124_32004194_32101602_32101700_32124466_32124586_32284339_32284468_32310982_32311088_32311889_32312083_32409117_32409228_32411197_32411286_32418335_32418381_32522364
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043174	chr13	-	218	1	Intergenic	novelGene_1388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGAATTACTGTAGCA	757	False	NA	NA	False	TTTAAA	-4	NA	32897396	32897178	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_32897200_32897400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043187	chr13	+	277	1	Intergenic	novelGene_1389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACATTTCTGTGCTTGTAG	NA	False	NA	NA	False	NA	NA	NA	32994186	32994463	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_32994200_32994500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043198	chr13	-	1304	7	FSM	ENSMUSG00000044734.17	ENSMUST00000076352.8	1918	7	-1	615	-1	-615	multi-exon	FALSE	canonical	3	136	junction_6	10.85382677011	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTTTTGTATGTTCAA	4868	False	NA	2	True	AATAAA	-20	NA	33035169	33026689	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_33027206_33029291_33029460_33029653_33029797_33031372_33031491_33032601_33032740_33034221_33034398_33035124
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043204	chr13	-	186	1	Intergenic	novelGene_1390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTCAGAATTTTATTAG	NA	False	NA	NA	False	NA	NA	NA	33069453	33069267	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_33069300_33069500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043212	chr13	+	1834	7	FSM	ENSMUSG00000021403.4	ENSMUST00000006392.3	3253	7	123	1296	-12	-1296	multi-exon	FALSE	canonical	3	32	junction_4	6.66874967458085	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATGGTCTTATTTTC	NA	False	NA	12	True	AATAAA	-25	NA	33211521	33224571	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_33211584_33213434_33213613_33216898_33217037_33217509_33217628_33219498_33219642_33221954_33222111_33223532
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043218	chr13	-	183	1	Intergenic	novelGene_1391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGGCTTTTATCGTTTT	NA	False	NA	NA	False	NA	NA	NA	33703032	33702849	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_33702800_33703000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043224	chr13	-	4016	7	FSM	ENSMUSG00000052180.16	ENSMUST00000110273.9	1325	7	-88	-2603	-88	2603	multi-exon	FALSE	canonical	3	772	junction_6	71.5830908028488	238	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTTGCTCTTTTCTGCTG	NA	False	NA	1	True	NA	NA	NA	34089241	34061195	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34083420_34089090
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043245	chr13	-	1365	7	FSM	ENSMUSG00000060147.16	ENSMUST00000043552.17	1547	7	179	3	-23	-3	multi-exon	FALSE	canonical	3	175	junction_6	98.4119742036845	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGTCTGTCTGCCTCAC	8436	False	NA	-1	True	AATAAA	-25	NA	34120002	34101903	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119904
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043295	chr13	+	1222	7	FSM	ENSMUSG00000038286.12	ENSMUST00000040656.8	1253	7	31	0	-4	0	multi-exon	FALSE	canonical	3	157	junction_3	28.0356915377524	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTGTTCCTGTTTGCTA	NA	False	NA	15	True	AATAAA	-17	NA	34221610	34258057	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_34221753_34228406_34228511_34230768_34230936_34234263_34234418_34244416_34244549_34247892_34248017_34257658
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043307	chr13	-	1610	4	FSM	ENSMUSG00000058672.8	ENSMUST00000056427.10	1610	4	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_2	19.2006944318862	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCCTTTTCTCTTCAACA	NA	False	NA	NA	False	AATAAA	-22	NA	34261990	34258256	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_34259512_34260160_34260272_34260531_34260641_34261855
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043315	chr13	-	1847	4	FSM	ENSMUSG00000045136.7	ENSMUST00000075774.5	2182	4	-133	468	-21	-468	multi-exon	FALSE	canonical	3	472	junction_3	10.4986771653491	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTTTTCTTTCTCTTCC	NA	False	NA	5	True	CATAAA	-20	NA	34314470	34311198	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_34312515_34312854_34312966_34313228_34313338_34314159
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043330	chr13	+	557	3	FSM	ENSMUSG00000071451.11	ENSMUST00000147632.3	555	3	-3	1	-3	-1	multi-exon	FALSE	canonical	3	1035	junction_1	31.5	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCATTTTACTTTGTTT	NA	False	NA	21	True	AATAAA	-21	NA	34346943	34362155	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_34347233_34350043_34350120_34361963
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043343	chr13	+	247	1	Intergenic	novelGene_1392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTAAGTAAACGAGTGTA	NA	False	NA	NA	False	NA	NA	NA	34716312	34716559	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_34716300_34716600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043349	chr13	+	181	1	Intergenic	novelGene_1393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATTGCCAATGTTA	123	False	NA	NA	False	NA	NA	NA	34924569	34924750	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_34924600_34924800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043354	chr13	+	4466	15	FSM	ENSMUSG00000021413.10	ENSMUST00000077853.5	7844	15	192	3186	-10	203	multi-exon	FALSE	canonical	3	139	junction_7	21.2239035437088	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAGCCATTTTTAAAAG	NA	False	NA	13	True	AATAAA	-20	NA	35059476	35086861	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043362	chr13	+	4555	18	NIC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	26	0	intron_retention	FALSE	canonical	3	40	junction_16	46.1771075265176	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGTCTACTGGCATTTTC	NA	False	NA	14	True	AATAAA	-19	NA	35059512	35090047	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35086115_35086612_35087257_35088026_35088073_35089865
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043369	chr13	-	218	1	Intergenic	novelGene_1394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAATGTTTTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35127824	35127606	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_35127600_35127800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043380	chr13	-	1414	10	FSM	ENSMUSG00000021417.16	ENSMUST00000171229.8	1426	10	12	0	0	0	multi-exon	TRUE	canonical	3	71	junction_9	38.39206450927	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAGAATTCATGTTGG	NA	False	NA	NA	False	AATAAA	-17	NA	35178115	35161730	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177214_35177996
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043393	chr13	+	186	1	Intergenic	novelGene_1395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTTAAAAAAAATTTAGAC	327	False	NA	NA	False	NA	NA	NA	35871074	35871260	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_35871100_35871300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043403	chr13	+	3190	7	NNC	ENSMUSG00000059288.15	novel	3470	10	NA	NA	-2859	1	at_least_one_novel_splicesite	FALSE	canonical	3	95	junction_1	63.2334739060114	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGAGTGTTTCTCTGCGT	NA	False	NA	19	True	AATAAA	-20	NA	35922436	36058047	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr13_+_35922622_35999891_36000559_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043414	chr13	+	3610	7	FSM	ENSMUSG00000059288.15	ENSMUST00000163595.3	3575	7	-29	-6	-29	1	multi-exon	FALSE	canonical	3	72	junction_1	71.2031522398334	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGAGTGTTTCTCTGCGT	NA	False	NA	19	True	AATAAA	-20	NA	35925266	36058047	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_35925872_35999891_36000559_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043425	chr13	+	2447	6	NNC	ENSMUSG00000059288.15	novel	3470	10	NA	NA	90711	1	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	80.650852444348	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGAGTGTTTCTCTGCGT	NA	False	NA	19	True	AATAAA	-20	NA	36037505	36058047	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr13_+_36037615_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043446	chr13	-	1061	3	FSM	ENSMUSG00000046573.8	ENSMUST00000053265.8	2086	3	-38	1063	-38	-1063	multi-exon	FALSE	canonical	3	325	junction_1	9.5	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCATTTATTTCCTGACA	NA	False	NA	NA	False	AATAAA	-15	NA	36301547	36163440	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_36163891_36276788_36276910_36301057
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043458	chr13	+	1681	7	FSM	ENSMUSG00000021420.14	ENSMUST00000021857.13	2125	7	444	0	-2	0	multi-exon	FALSE	canonical	3	195	junction_1	25.2300526268883	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACATAGCATTTGTCTTT	NA	False	NA	9	True	AATAAA	-20	NA	36301838	36721567	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_36301989_36388491_36389125_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043468	chr13	+	201	1	Intergenic	novelGene_1396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAAAGCTTTTCTCCCA	NA	False	NA	NA	False	NA	NA	NA	37569831	37570032	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_37569800_37570000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043473	chr13	-	218	1	Intergenic	novelGene_1397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTATTTTCGTGCATG	NA	False	NA	NA	False	TTTAAA	-6	NA	37703788	37703570	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_37703600_37703800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043491	chr13	-	4742	8	FSM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	4	4587	4	-4587	multi-exon	FALSE	canonical	3	888	junction_3	64.8026832399866	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGTGTGTGGTGGTT	5850	False	NA	-3	True	ATTAAA	-23	NA	38178189	38159963	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043504	chr13	+	369	1	Intergenic	novelGene_1398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGGGCAGTGGTGGCACA	NA	False	NA	NA	False	AAGAAA	-17	NA	38174779	38175148	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_38174800_38175100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043513	chr13	+	2490	17	FSM	ENSMUSG00000021428.10	ENSMUST00000021866.10	2738	17	248	0	-2	0	multi-exon	FALSE	canonical	3	187	junction_3	18.4889113727661	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTTGCATTCTTGCTA	4736	False	NA	18	True	AATAAA	-19	NA	38221218	38245409	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_38221508_38224048_38224251_38227026_38227118_38227884_38227955_38229248_38229292_38231220_38231314_38232855_38232969_38233051_38233133_38234199_38234287_38234783_38234922_38236244_38236349_38236853_38236961_38240137_38240204_38241112_38241233_38242663_38242718_38243915_38244069_38244730
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043543	chr13	-	183	1	Intergenic	novelGene_1399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGCCTTCTAGGGAGA	NA	False	NA	NA	False	NA	NA	NA	38509890	38509707	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_38509700_38509900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043547	chr13	-	182	1	Intergenic	novelGene_1400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAAGCGAGCTTGTG	1116	False	NA	NA	False	NA	NA	NA	38527710	38527528	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_38527500_38527700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043561	chr13	-	2669	10	FSM	ENSMUSG00000038991.18	ENSMUST00000035988.16	2843	10	-13	187	-13	7	multi-exon	FALSE	canonical	3	973	junction_6	103.236992125933	1250	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTCTTTGCTTAAATG	NA	False	NA	NA	False	AATAAA	-24	NA	38712479	38684241	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_38685685_38687406_38687537_38688699_38688783_38690924_38691066_38691869_38691957_38694102_38694219_38697043_38697141_38702958_38703065_38707304_38707455_38712163
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043571	chr13	-	1728	5	FSM	ENSMUSG00000038982.11	ENSMUST00000035899.8	5634	5	46	3860	-2	-3860	multi-exon	FALSE	canonical	3	63	junction_3	8.98262211161084	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTATTTGAGATTTCTTT	NA	False	NA	-23	True	ATTAAA	-20	NA	38819039	38786676	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_38788005_38796618_38796678_38803065_38803196_38814968_38815052_38818911
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043597	chr13	+	209	1	Intergenic	novelGene_1401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTGACCCCACCTCCAA	2493	False	NA	NA	False	NA	NA	NA	41003803	41004012	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_41003800_41004000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043615	chr13	+	4319	3	FSM	ENSMUSG00000021360.17	ENSMUST00000069958.15	3929	3	-389	-1	-389	0	multi-exon	FALSE	canonical	3	51	junction_1	65	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATAGTGGATATTTATTT	NA	False	NA	20	True	AATAAA	-25	NA	41040279	41114368	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_41041762_41107051_41107148_41111627
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043619	chr13	+	193	1	Intergenic	novelGene_1402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAGAAATCAAGCCTGGT	NA	False	NA	NA	False	TTTAAA	-1	NA	41069057	41069250	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_41069100_41069200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043624	chr13	+	4003	3	FSM	ENSMUSG00000021360.17	ENSMUST00000067778.8	4038	3	35	0	-14	0	multi-exon	FALSE	canonical	3	123	junction_1	29	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATAGTGGATATTTATTT	NA	False	NA	20	True	AATAAA	-25	NA	41071111	41114368	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_41072278_41107051_41107148_41111627
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043634	chr13	+	1760	10	FSM	ENSMUSG00000038683.17	ENSMUST00000046951.10	1722	10	-38	0	-38	0	multi-exon	FALSE	canonical	3	605	junction_5	43.1108247413169	232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGCTTAATTACATTTAT	NA	False	NA	NA	False	AGTAAA	-28	NA	41154460	41166491	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_41154890_41158212_41158376_41161491_41161613_41161686_41161762_41162361_41162415_41162694_41162841_41162923_41163022_41164658_41164759_41165809_41165934_41166040
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043648	chr13	+	925	6	FSM	ENSMUSG00000021361.8	ENSMUST00000021790.7	914	6	-15	4	-15	-4	multi-exon	FALSE	canonical	3	613	junction_2	43.7154434954056	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTGGTGTCGTCTTTG	NA	False	NA	11	True	AATAAA	-18	NA	41169752	41176058	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_41169875_41170590_41170650_41171181_41171259_41171831_41171934_41174594_41174683_41175581
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043657	chr13	+	213	1	Intergenic	novelGene_1403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCAGACTTCAGGGTATT	NA	False	NA	NA	False	NA	NA	NA	41222958	41223171	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_41223000_41223200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043662	chr13	-	3726	8	FSM	ENSMUSG00000021364.17	ENSMUST00000021793.15	3840	8	0	114	0	4	multi-exon	FALSE	canonical	3	52	junction_4	7.79848232226067	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGCAACTTTTCTTAT	7559	False	NA	NA	False	AATAAA	-19	NA	41373881	41335970	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_41338884_41340328_41340464_41340904_41341030_41343421_41343594_41345363_41345442_41348122_41348311_41350610_41350675_41373830
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043682	chr13	-	187	1	Intergenic	novelGene_1404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAAGTAGATAAAC	NA	False	NA	NA	False	NA	NA	NA	41701362	41701175	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_41701200_41701400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043692	chr13	-	1245	8	FSM	ENSMUSG00000021368.16	ENSMUST00000179852.9	1246	8	1	0	0	0	multi-exon	FALSE	canonical	3	148	junction_7	48.9393627307283	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCGTGGCCATGATG	NA	False	NA	-17	True	AGTAAA	-16	NA	43324959	43305215	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_43305457_43306545_43306676_43308164_43308311_43312738_43312877_43318754_43318943_43322249_43322331_43323277_43323424_43324784
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043706	chr13	-	196	1	Intergenic	novelGene_1405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTAAAACCGAAAAACAGT	NA	False	NA	NA	False	NA	NA	NA	43496860	43496664	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_43496700_43496900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043709	chr13	+	1397	9	FSM	ENSMUSG00000054021.7	ENSMUST00000223194.2	1398	9	1	0	1	0	multi-exon	FALSE	canonical	3	17	junction_1	63.0811729044411	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATTTTTTTGTACTTT	NA	False	NA	10	True	ATTAAA	-22	NA	43518982	43548679	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_43519021_43524194_43524345_43525307_43525442_43530170_43530397_43533148_43533237_43533975_43534030_43536584_43536709_43538973_43539090_43548212
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043725	chr13	+	960	8	FSM	ENSMUSG00000063200.5	ENSMUST00000071926.5	1800	8	-27	867	-27	0	multi-exon	FALSE	canonical	3	1274	junction_1	87.1250567299906	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTCACATTTCTTTTCT	NA	False	NA	31	True	TATAAA	-31	NA	43551838	43555470	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_43552135_43552210_43552272_43552986_43553046_43554068_43554098_43554328_43554411_43554772_43554895_43554975_43555054_43555237
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043735	chr13	+	746	7	NIC	ENSMUSG00000063200.5	novel	1800	8	NA	NA	16	-2	intron_retention	FALSE	canonical	3	1367	junction_3	68.3408532447629	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGTCACATTTCTTTT	NA	False	NA	29	True	TATAAA	-29	NA	43552126	43555468	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_+_43552272_43552986_43553046_43554068_43554098_43554328_43554411_43554772_43554895_43554975_43555054_43555237
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043737	chr13	+	81	1	ISM	ENSMUSG00000063200.5	ENSMUST00000071926.5	1800	8	3522	869	582	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGTCACATTTCTTTT	NA	False	NA	29	True	TATAAA	-29	NA	43555387	43555468	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr13_+_43555400_43555500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043769	chr13	+	202	1	Intergenic	novelGene_1406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAATGGAAATTCT	NA	False	NA	NA	False	NA	NA	NA	44539347	44539549	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_44539300_44539500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043782	chr13	+	207	1	Intergenic	novelGene_1407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	381	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATCAGATCACTGTGCCC	7764	False	NA	NA	False	NA	NA	NA	44774385	44774592	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_44774400_44774600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043787	chr13	+	177	1	Intergenic	novelGene_1408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTGAGCGAGCAGGGTC	7637	False	NA	NA	False	NA	NA	NA	44790052	44790229	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_44790100_44790200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043792	chr13	+	146	1	Intergenic	novelGene_1409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGAATGATTGT	9404	False	NA	NA	False	NA	NA	NA	44829366	44829512	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_44829400_44829500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043793	chr13	+	5683	19	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	110	-2	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	184.132198886199	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGTCTGTCTTGTGGG	8755	False	NA	11	True	AATAAA	-13	NA	44883120	45075114	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_+_44883254_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043815	chr13	+	5998	18	FSM	ENSMUSG00000038518.16	ENSMUST00000173246.8	5997	18	-1	0	-1	0	multi-exon	FALSE	canonical	3	632	junction_5	80.8182205637225	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTCTTGTGGGAAGGG	NA	False	NA	16	True	AATAAA	-18	NA	44884745	45075119	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043834	chr13	-	232	1	Intergenic	novelGene_1410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACTGAGAAGAAATTTCAA	NA	False	NA	NA	False	AAGAAA	-35	NA	44917503	44917271	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_44917300_44917500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043838	chr13	-	1352	10	FSM	ENSMUSG00000057531.15	ENSMUST00000072329.15	1362	10	15	-5	15	1	multi-exon	FALSE	canonical	3	444	junction_2	46.8187996428785	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCTGGTGAGTATATGG	NA	False	NA	NA	False	AATAAA	-20	NA	45155608	45075549	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_45075931_45076624_45076769_45084471_45084628_45106647_45106671_45123521_45123655_45136216_45136350_45139510_45139572_45145494_45145546_45147160_45147215_45155392
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043864	chr13	+	1567	9	FSM	ENSMUSG00000000253.14	ENSMUST00000000260.13	1580	9	13	0	13	0	multi-exon	FALSE	canonical	3	46	junction_4	10.0428768288773	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTGCTGGAGTTTGCGT	NA	False	NA	22	True	AATATA	-16	NA	45660932	45699858	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_45661220_45667870_45667991_45670474_45670559_45674327_45674502_45683183_45683266_45685769_45685877_45692500_45692544_45695954_45696115_45699348
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043873	chr13	+	3737	5	FSM	ENSMUSG00000069237.9	ENSMUST00000099547.4	3664	5	-65	-8	-65	8	multi-exon	FALSE	canonical	3	172	junction_4	10.8972473588517	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTGTCTGTGCCTATT	NA	False	NA	15	True	AATAAA	-15	NA	46822932	46831540	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_46823732_46824684_46824806_46827021_46827146_46827728_46827869_46828987
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043895	chr13	+	186	1	Intergenic	novelGene_1411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGACATCATCAGCTGAAG	NA	False	NA	NA	False	TTTAAA	-3	NA	47060264	47060450	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_47060300_47060400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043897	chr13	-	178	1	Intergenic	novelGene_1412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAGAGAGAGAGAAAG	NA	False	NA	NA	False	NA	NA	NA	47066328	47066150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_47066200_47066300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043900	chr13	+	213	1	Intergenic	novelGene_1413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAGTCACTGAAATGCCT	6658	False	NA	NA	False	ATTAAA	-11	NA	47073113	47073326	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_47073100_47073300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043912	chr13	-	1007	9	FSM	ENSMUSG00000021376.12	ENSMUST00000021806.11	2708	9	67	1634	1	2	multi-exon	FALSE	canonical	3	68	junction_8	22.6436387314407	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTAGCCATGGTTTCTG	NA	False	NA	0	True	ATTAAA	-19	NA	47196619	47178652	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_47178954_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370_47189504_47193579_47193673_47194874_47195056_47196579
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043930	chr13	-	2612	11	FSM	ENSMUSG00000021377.16	ENSMUST00000021807.13	2556	11	-41	-15	-30	8	multi-exon	FALSE	canonical	3	1333	junction_10	113.482333426838	1101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTGCTTAAGTGTT	NA	False	NA	0	True	AATAAA	-35	NA	47259707	47238242	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47253745_47255098_47255209_47255448_47255551_47259047_47259214_47259548
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043941	chr13	-	626	1	ISM	ENSMUSG00000021377.16	ENSMUST00000138401.2	1946	5	13031	7	12930	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGTATTTAATCTTT	NA	False	NA	-15	True	AATAAA	-20	NA	47238883	47238257	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr13_-_47238300_47238900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043947	chr13	-	2439	10	NIC	ENSMUSG00000021377.16	novel	2556	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	61	junction_7	480.043233649678	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGTATTTAATCTTT	NA	False	NA	-15	True	AATAAA	-20	NA	47259659	47238257	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47253745_47255448_47255551_47259047_47259214_47259548
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043948	chr13	-	2562	10	ISM	ENSMUSG00000021377.16	ENSMUST00000021807.13	2556	11	329	0	-31	0	3prime_fragment	FALSE	canonical	3	1428	junction_1	93.7092956902645	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGTATTTAATCTTT	NA	False	NA	-15	True	AATAAA	-20	NA	47259337	47238257	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47253745_47255098_47255209_47255448_47255551_47259047
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043960	chr13	+	3966	3	FSM	ENSMUSG00000021379.3	ENSMUST00000021810.3	3849	3	-115	-2	-115	2	multi-exon	FALSE	canonical	3	109	junction_1	7	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAAGTTTGTGGTTTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	48414588	48419504	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_48415415_48415760_48415824_48416427
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043970	chr13	-	184	1	Intergenic	novelGene_1414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	271	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTAGAAAGTAGAATGTG	NA	False	NA	NA	False	NA	NA	NA	48718345	48718161	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_48718200_48718300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043983	chr13	+	180	1	Intergenic	novelGene_1415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGGCATTATAGGT	NA	False	NA	NA	False	NA	NA	NA	48757096	48757276	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_48757100_48757300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000043998	chr13	-	5386	18	FSM	ENSMUSG00000038014.8	ENSMUST00000060805.7	5105	18	-278	-3	-278	3	multi-exon	FALSE	canonical	3	179	junction_8	31.720775722809	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGTGTGGCTTTTAAAT	6105	False	NA	-15	True	AATAAA	-24	NA	49121771	49032691	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044013	chr13	+	209	1	Intergenic	novelGene_1416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAGCCACGGAGTAGCA	NA	False	NA	NA	False	AAAACA	-8	NA	49145354	49145563	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_49145400_49145600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044030	chr13	-	833	6	FSM	ENSMUSG00000037960.12	ENSMUST00000048946.7	804	6	-22	-7	-11	6	multi-exon	FALSE	canonical	3	362	junction_5	10.4115320678563	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGAATGTCTTCTCCTTG	NA	False	NA	0	True	ATTAAA	-20	NA	49369524	49356419	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_49356712_49357193_49357266_49357404_49357465_49358667_49358822_49361479_49361623_49369412
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044056	chr13	+	2863	13	FSM	ENSMUSG00000021385.11	ENSMUST00000220447.2	4421	13	-25	1583	-25	0	multi-exon	FALSE	canonical	3	101	junction_9	16.41053184865	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTATAGAGTTTGTTAAAT	NA	False	NA	11	True	NA	NA	NA	49574699	49616466	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_49574943_49584344_49584393_49585845_49585942_49587304_49587372_49588945_49589068_49590186_49590277_49595428_49595488_49596897_49596971_49599778_49600053_49602712_49602864_49603456_49603560_49612088_49612169_49615009
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044065	chr13	-	1138	8	FSM	ENSMUSG00000021391.11	ENSMUST00000021818.9	1144	8	9	-3	-9	3	multi-exon	FALSE	canonical	3	162	junction_6	22.1387092889263	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGCTTTGTACAGTTAAG	NA	False	NA	-1	True	AATAAA	-24	NA	49806252	49617495	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_49617814_49618170_49618263_49619154_49619235_49780730_49780828_49794701_49794791_49801041_49801131_49803596_49803776_49806058
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044075	chr13	+	188	1	Intergenic	novelGene_1417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGGACAAAGGACTTGAATA	NA	False	NA	NA	False	NA	NA	NA	49795274	49795462	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_49795300_49795500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044089	chr13	+	5383	33	NIC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	14	-7	intron_retention	FALSE	canonical	1	598	junction_16	243.941941655053	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTGTGTTGGAAGTAGT	NA	False	NA	23	True	ATTAAA	-24	NA	49835619	49887736	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044100	chr13	+	4437	34	NIC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	120	junction_1	357.515439185776	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGAAGTAGTTATTCTC	NA	False	NA	30	True	ATTAAA	-31	NA	49835669	49887743	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_+_49835785_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044112	chr13	-	223	1	Intergenic	novelGene_1418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAAGGTTTGCCTGTATG	NA	False	NA	NA	False	NA	NA	NA	51174700	51174477	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_51174500_51174700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044121	chr13	+	185	1	Intergenic	novelGene_1419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGGGGGCTCGGTTGCCA	NA	False	NA	NA	False	NA	NA	NA	51219009	51219194	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_51219000_51219200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044127	chr13	-	181	1	Intergenic	novelGene_1420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGAAAATCTATTGGCT	NA	False	NA	NA	False	NA	NA	NA	51234337	51234156	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_51234200_51234300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044160	chr13	-	192	1	Intergenic	novelGene_1421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACCATCTCTGGGGCTAG	NA	False	NA	NA	False	NA	NA	NA	51341274	51341082	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_51341100_51341300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044163	chr13	+	3724	2	FSM	ENSMUSG00000067586.5	ENSMUST00000087978.5	4463	2	72	667	72	-667	multi-exon	FALSE	canonical	3	36	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGAGGCCTGTGTGGTA	NA	False	NA	11	True	AATAAA	-29	NA	51562746	51576166	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_51562982_51572677
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044175	chr13	+	190	1	Intergenic	novelGene_1422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGGGTAGAGAGTGACTAA	NA	False	NA	NA	False	NA	NA	NA	51672605	51672795	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_51672600_51672800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044184	chr13	+	658	3	FSM	ENSMUSG00000062248.6	ENSMUST00000075853.6	692	3	34	0	34	0	multi-exon	FALSE	canonical	3	3514	junction_2	7.5	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTGTTGAAATTAATTTG	NA	False	NA	NA	False	AATAAA	-24	NA	51799301	51804696	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_51799508_51803620_51803749_51804372
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044194	chr13	+	3328	17	FSM	ENSMUSG00000035139.15	ENSMUST00000040117.15	3328	17	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_13	19.2596363867546	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGCTATTGTGATCTT	5494	False	NA	8	True	AATAAA	-20	NA	51805732	51838080	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_51805857_51806642_51806792_51808421_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044223	chr13	+	185	1	Intergenic	novelGene_1423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAACATTCCTTAT	NA	False	NA	NA	False	NA	NA	NA	51881685	51881870	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_51881700_51881900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044230	chr13	+	183	1	Intergenic	novelGene_1424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAGAGCTCATTAT	NA	False	NA	NA	False	NA	NA	NA	51939755	51939938	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_51939800_51939900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044237	chr13	+	1078	4	FSM	ENSMUSG00000021453.3	ENSMUST00000021903.3	1071	4	0	-7	0	7	multi-exon	FALSE	canonical	3	52	junction_3	4.02768199119819	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATGCCTTTTTATTGAG	NA	False	NA	NA	False	AATAAA	-15	NA	52000713	52002511	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_52000869_52001387_52001490_52001591_52001806_52001904
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044245	chr13	+	185	1	Intergenic	novelGene_1425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTACGAGTTGGTTATT	NA	False	NA	NA	False	NA	NA	NA	52360680	52360865	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_52360700_52360900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044255	chr13	-	186	1	Intergenic	novelGene_1426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGAGAGAGTTGCTTTGG	NA	False	NA	NA	False	NA	NA	NA	52747300	52747114	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_52747100_52747300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044278	chr13	-	2042	2	FSM	ENSMUSG00000056749.8	ENSMUST00000071065.8	2026	2	-16	0	-16	0	multi-exon	FALSE	canonical	3	64	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGGCTCTGTTCCACTT	NA	False	NA	1	True	AATAAA	-19	NA	53135125	53121244	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_53123058_53134896
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044291	chr13	-	3759	9	NNC	ENSMUSG00000021464.16	novel	3985	9	NA	NA	115218	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_8	35.4788669492136	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTATTATCTCTGGG	NA	False	NA	-28	True	NA	NA	NA	53314476	53263352	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr13_-_53265705_53267083_53267287_53271170_53271417_53272726_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53300669_53300748_53314358
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044294	chr13	-	4069	9	FSM	ENSMUSG00000021464.16	ENSMUST00000021918.10	3985	9	-84	0	-84	0	multi-exon	FALSE	canonical	3	114	junction_5	5.12195031213697	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTATTATCTCTGGG	NA	False	NA	-28	True	NA	NA	NA	53440244	53263352	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_53265705_53267083_53267287_53271170_53271417_53272726_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53300669_53300748_53439816
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044306	chr13	+	735	1	Intergenic	novelGene_1427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAAACCCTAATCTCTCA	NA	False	NA	NA	False	NA	NA	NA	53265763	53266498	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_53265800_53266500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044310	chr13	-	203	1	Intergenic	novelGene_1428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAGCTAATGACTGTATG	NA	False	NA	0	True	NA	NA	NA	53344592	53344389	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_53344400_53344600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044325	chr13	+	197	1	Intergenic	novelGene_1429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAGGGGGAGGGAAGGA	NA	False	NA	NA	False	NA	NA	NA	53611410	53611607	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_53611400_53611600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044333	chr13	+	239	1	Intergenic	novelGene_1430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGCATTAGCCCAAATGAA	NA	False	NA	NA	False	NA	NA	NA	54225360	54225599	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_54225400_54225600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044338	chr13	+	2837	11	FSM	ENSMUSG00000021474.10	ENSMUST00000021930.10	2783	11	-50	-4	-50	4	multi-exon	FALSE	canonical	3	779	junction_1	55.358919787149	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTACTTGTCCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	54225837	54262365	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044361	chr13	+	3292	11	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	277.023031533481	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACTGTCTCTTACTTGTC	NA	False	NA	NA	False	AATAAA	-18	NA	54225916	54262361	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr13_+_54226490_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044366	chr13	-	2854	3	NNC	ENSMUSG00000113404.2	novel	2746	2	NA	NA	-2775	6	intron_retention	FALSE	canonical	3	5	junction_1	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATGTGTTTGTTTTCTT	NA	False	NA	NA	False	AATATA	-18	NA	54484674	54463917	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr13_-_54466497_54481726_54481884_54484556
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044379	chr13	-	2381	6	NIC	ENSMUSG00000025872.6	novel	2335	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	215.338802820114	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTGTCTAAAGTTACTA	NA	False	NA	-3	True	AATAAA	-15	NA	54616637	54606649	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_-_54608051_54611284_54611386_54611494_54611657_54613992_54614269_54615638_54615796_54616353
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044386	chr13	+	4805	10	FSM	ENSMUSG00000043183.19	ENSMUST00000121401.8	4819	10	14	0	-11	0	multi-exon	FALSE	canonical	3	26	junction_3	7.33333333333333	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAGACTCCAGGGCTTCT	NA	False	NA	17	True	AATAAA	-17	NA	54651605	54699103	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_54651818_54671782_54674486_54676116_54676350_54676966_54677037_54684894_54685050_54687516_54687670_54689236_54689366_54694789_54694947_54695067_54695153_54698195
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044390	chr13	-	176	1	Intergenic	novelGene_1431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTTTTTATTATTATT	9408	False	NA	NA	False	NA	NA	NA	54678866	54678690	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_54678700_54678900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044400	chr13	-	2648	9	FSM	ENSMUSG00000025871.19	ENSMUST00000026989.15	2727	9	79	0	0	0	multi-exon	FALSE	canonical	3	520	junction_7	24.8696602308918	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTCTTGTCCATTCTG	NA	False	NA	NA	False	AATAAA	-26	NA	54713169	54699030	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54711997_54712086_54712327_54712435_54712994
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044404	chr13	-	2618	10	NNC	ENSMUSG00000025871.19	novel	2727	9	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	170.539521504728	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGTCTTGTCCATTCT	NA	False	NA	NA	False	AATAAA	-25	NA	54713169	54699031	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr13_-_54699908_54699936_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54711997_54712086_54712327_54712435_54712994
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044414	chr13	-	2524	9	NNC	ENSMUSG00000025871.19	novel	2502	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	227.140891023611	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGGTCTGTCTTGTCCA	NA	False	NA	NA	False	AATAAA	-21	NA	54713167	54699035	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr13_-_54699908_54699936_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54712327_54712435_54712994
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044418	chr13	-	2555	8	FSM	ENSMUSG00000025871.19	ENSMUST00000153065.8	2502	8	-53	0	0	0	multi-exon	FALSE	canonical	3	41	junction_6	177.014469603419	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGGTCTGTCTTGTCCA	NA	False	NA	NA	False	AATAAA	-21	NA	54713169	54699035	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54712327_54712435_54712994
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044419	chr13	-	2140	5	FSM	ENSMUSG00000025871.19	ENSMUST00000153708.2	946	5	-21	-1173	2	0	multi-exon	FALSE	canonical	3	31	junction_4	214.957408572024	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGGTCTGTCTTGTCCA	NA	False	NA	NA	False	AATAAA	-21	NA	54713167	54699035	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54712994
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044447	chr13	-	1188	5	FSM	ENSMUSG00000025869.12	ENSMUST00000026987.12	1756	5	10	558	10	-207	multi-exon	FALSE	canonical	3	1006	junction_4	30.4302481094059	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTGTTTACTGTGCCC	NA	False	NA	0	True	ATTAAA	-18	NA	54737893	54732555	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_54733238_54733632_54733740_54736410_54736481_54737475_54737585_54737673
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044453	chr13	+	647	2	FSM	ENSMUSG00000025868.7	ENSMUST00000026986.7	648	2	-3	4	-3	-4	multi-exon	FALSE	canonical	3	1416	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTATTTCTTAATCTCA	5975	False	NA	19	True	AATAAA	-23	NA	54738016	54738967	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_54738233_54738536
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044472	chr13	+	4329	11	FSM	ENSMUSG00000025873.17	ENSMUST00000126071.9	4322	11	1	-8	1	8	multi-exon	TRUE	canonical	0	0	junction_3	132.701770900015	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGGTCTTTCTGTCTG	NA	False	NA	NA	False	ATTAAA	-30	NA	54769597	54811884	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044482	chr13	+	4168	10	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	175.481418945317	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGTGGGTCTTTCTGT	NA	False	NA	NA	False	ATTAAA	-27	NA	54769616	54811881	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044502	chr13	+	178	1	Intergenic	novelGene_1432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATAAGAAAGAAAGATGG	NA	False	NA	NA	False	NA	NA	NA	54779375	54779553	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_54779400_54779600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044530	chr13	-	3792	11	FSM	ENSMUSG00000034928.17	ENSMUST00000134862.8	3797	11	16	-11	16	0	multi-exon	FALSE	canonical	3	257	junction_7	149.659480154115	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGGCTGCTCTCT	NA	False	NA	-5	True	AATAAA	-28	NA	54841704	54827211	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831900_54832150_54832302_54841541
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044550	chr13	-	3791	11	FSM	ENSMUSG00000034928.17	ENSMUST00000128257.8	1689	11	64	-2166	5	0	multi-exon	FALSE	canonical	3	111	junction_10	190.55762907845	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGGCTGCTCTCT	NA	False	NA	-5	True	AATAAA	-28	NA	54836008	54827211	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54835843
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044605	chr13	+	1528	8	FSM	ENSMUSG00000025875.15	ENSMUST00000026993.14	1585	8	56	1	30	0	multi-exon	FALSE	canonical	3	352	junction_3	20.9606044468071	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGTTTATGTTCACCG	NA	False	NA	17	True	AATAAA	-18	NA	54937245	54944588	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_54937495_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044615	chr13	+	1139	9	NIC	ENSMUSG00000025875.15	novel	1048	9	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_8	99.0959131347	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGTTTATGTTCACCG	NA	False	NA	17	True	AATAAA	-18	NA	54937255	54944588	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_+_54937495_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969_54944032_54944410
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044640	chr13	+	186	1	Intergenic	novelGene_1433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTGAAAAGAAAGAAAGAAA	7823	False	NA	NA	False	AATAAA	-6	NA	55198280	55198466	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_55198300_55198500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044650	chr13	+	177	1	Intergenic	novelGene_1434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAATTAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	55241994	55242171	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_55242000_55242200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044654	chr13	+	3368	7	FSM	ENSMUSG00000021481.12	ENSMUST00000021937.12	3333	7	-30	-5	-14	5	multi-exon	FALSE	canonical	3	43	junction_4	9.82202739877171	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGATGTGTGCGCTCTTCC	5180	False	NA	16	True	NA	NA	NA	55253109	55282643	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_55253332_55260848_55260953_55261490_55261584_55263292_55263438_55270142_55270329_55278346_55278441_55280119
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044669	chr13	+	187	1	Intergenic	novelGene_1435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGAGAGAGAGAGATCTC	4710	False	NA	NA	False	NA	NA	NA	55277656	55277843	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_55277700_55277800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044674	chr13	+	252	1	Intergenic	novelGene_1436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATAAATCTCTTTTGTTT	2859	False	NA	NA	False	NA	NA	NA	55293129	55293381	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_55293100_55293400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044680	chr13	-	215	1	Intergenic	novelGene_1437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGCATTCAGGGAGGAC	121	False	NA	NA	False	NA	NA	NA	55329628	55329413	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_55329400_55329600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044683	chr13	+	201	1	Intergenic	novelGene_1438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAGAGAGAGAGAAAGA	9117	False	NA	NA	False	NA	NA	NA	55345085	55345286	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_55345100_55345300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044709	chr13	+	220	1	Intergenic	novelGene_1439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCAGTACTAGAGATTG	NA	False	NA	NA	False	AATAAA	-19	NA	55369704	55369924	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_55369700_55369900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044720	chr13	+	195	1	Intergenic	novelGene_1440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGAGTTGAAGGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	55436548	55436743	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_55436500_55436700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044729	chr13	+	189	1	Intergenic	novelGene_1441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAAATCATTGTATCCC	6682	False	NA	NA	False	NA	NA	NA	55456673	55456862	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_55456700_55456900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044739	chr13	+	2160	1	ISM	ENSMUSG00000021488.9	ENSMUST00000099490.3	12784	23	106384	0	25198	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCCTTGCCCTGTGTTTT	NA	False	NA	15	True	AGTAAA	-18	NA	55463978	55466138	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr13_+_55464000_55466100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044745	chr13	-	1205	8	FSM	ENSMUSG00000034789.9	ENSMUST00000035242.9	1168	8	-24	-13	-23	8	multi-exon	FALSE	canonical	3	320	junction_3	95.4118890465364	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGTGTCAAAACACCTAG	6418	False	NA	-9	True	AATAAA	-27	NA	55469782	55467684	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_55468028_55468124_55468188_55468315_55468367_55468557_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044764	chr13	-	1439	6	NIC	ENSMUSG00000034789.9	novel	1168	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	480	junction_5	51.3949413853153	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTGTGCACTGGGTG	6441	False	NA	-22	True	AATAAA	-14	NA	55469759	55467697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_-_55468028_55468124_55468188_55468315_55468658_55468739_55468808_55468914_55468994_55469202
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044777	chr13	+	1140	5	FSM	ENSMUSG00000021486.8	ENSMUST00000021942.8	2644	5	1504	0	-15	0	multi-exon	FALSE	canonical	3	1299	junction_2	62.1248742453456	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGGAGTCAGATAGCTT	5538	False	NA	18	True	NA	NA	NA	55469816	55473085	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_55470095_55470665_55470892_55472143_55472258_55472339_55472419_55472642
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044796	chr13	+	172	1	Intergenic	novelGene_1442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCTGGACTCCTTCAGTG	978	False	NA	NA	False	NA	NA	NA	55479635	55479807	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_55479600_55479800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044815	chr13	-	183	1	Intergenic	novelGene_1443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTAAAGTTCC	NA	False	NA	NA	False	NA	NA	NA	55497950	55497767	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_55497800_55498000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044826	chr13	-	167	1	Intergenic	novelGene_1444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCTGGAGCAAGCGAGAAA	NA	False	NA	NA	False	NA	NA	NA	55543287	55543120	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_55543100_55543300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044832	chr13	+	188	1	Intergenic	novelGene_1445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAATTATTGGGGCTAT	NA	False	NA	NA	False	NA	NA	NA	55572012	55572200	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_55572000_55572200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044845	chr13	+	3468	16	FSM	ENSMUSG00000074886.12	ENSMUST00000099482.5	2169	16	-148	-1151	-25	0	multi-exon	FALSE	canonical	3	190	junction_15	75.6883669323687	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	NA	False	NA	28	True	AATACA	-30	NA	55593125	55608740	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607145
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044849	chr13	+	3015	16	FSM	ENSMUSG00000074886.12	ENSMUST00000224118.2	1997	16	-146	-872	-23	0	multi-exon	FALSE	canonical	3	104	junction_15	96.0563723376365	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	NA	False	NA	28	True	AATACA	-30	NA	55593127	55608740	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607596
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044869	chr13	-	1696	13	NNC	ENSMUSG00000021493.16	novel	1697	13	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	43.2636458883848	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTGTGCCTCCCCGCTT	NA	False	NA	-5	True	AATAAA	-17	NA	55661247	55646226	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr13_-_55646548_55646706_55646823_55646913_55647035_55652470_55652652_55653746_55653982_55654118_55654190_55655142_55655180_55655300_55655438_55656020_55656140_55656592_55656624_55656704_55656857_55660124_55660232_55661179
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044870	chr13	-	1693	13	FSM	ENSMUSG00000021493.16	ENSMUST00000046246.13	1697	13	6	-2	-2	-2	multi-exon	FALSE	canonical	3	56	junction_4	33.4015967682185	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTGTGCCTCCCCGCTT	NA	False	NA	-5	True	AATAAA	-17	NA	55661253	55646226	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_55646548_55646706_55646823_55646913_55647035_55652470_55652652_55653746_55653982_55654118_55654181_55655142_55655180_55655300_55655438_55656020_55656140_55656592_55656624_55656704_55656857_55660124_55660232_55661179
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044876	chr13	-	1005	8	FSM	ENSMUSG00000021493.16	ENSMUST00000069968.13	1006	8	0	1	0	0	multi-exon	FALSE	canonical	3	62	junction_1	27.1751687376246	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGCCTCTGTCTCCC	NA	False	NA	-3	True	AATAAA	-16	NA	55661251	55654586	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_55654937_55655142_55655180_55655300_55655438_55656020_55656140_55656592_55656624_55656704_55656857_55660124_55660232_55661179
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044885	chr13	-	2084	17	FSM	ENSMUSG00000021494.10	ENSMUST00000224765.2	2199	17	116	-1	-21	1	multi-exon	FALSE	canonical	3	642	junction_9	44.9861089671023	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTCTTCCTCTCTCACCC	NA	False	NA	-4	True	ATTAAA	-22	NA	55684355	55678227	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044890	chr13	-	2154	16	NIC	ENSMUSG00000021494.10	novel	2199	17	NA	NA	-11	0	intron_retention	FALSE	canonical	3	642	junction_9	44.9204729370572	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTCTTCCTCTCTCACC	NA	False	NA	-5	True	ATTAAA	-21	NA	55684345	55678228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683371_55683433_55683542_55683859_55684108_55684220_55684293
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044904	chr13	-	4343	12	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_5	51.3880070904416	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTATGATGGTGATTTG	NA	False	NA	-4	True	GATAAA	-19	NA	55718889	55687128	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55697774_55697821_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55717517
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044905	chr13	-	3172	10	NIC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_9	48.4171686720963	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTATGATGGTGATTTG	NA	False	NA	-4	True	GATAAA	-19	NA	55718895	55687128	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55718587
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044922	chr13	+	1446	5	FSM	ENSMUSG00000058569.9	ENSMUST00000109905.5	1420	5	-26	0	-15	0	multi-exon	FALSE	canonical	3	616	junction_1	31.3847096529504	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTCGTGGTTACTCTTTT	NA	False	NA	NA	False	NA	NA	NA	55740955	55745510	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_55741171_55741313_55741415_55742517_55742644_55743280_55743428_55744653
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044932	chr13	+	2150	6	FSM	ENSMUSG00000021504.15	ENSMUST00000064701.8	2130	6	-17	-3	-17	2	multi-exon	FALSE	canonical	3	87	junction_4	8.85437744847146	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGGCAAGGAACTGGACT	NA	False	NA	8	True	AATAAA	-21	NA	55747860	55758258	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_55748006_55751832_55752196_55755009_55755236_55756154_55756239_55756510_55756616_55757031
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044939	chr13	+	1386	4	FSM	ENSMUSG00000021501.5	ENSMUST00000021963.5	1382	4	2	-6	2	6	multi-exon	FALSE	canonical	3	82	junction_2	4.49691252107735	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCTGTACATTTTATTT	NA	False	NA	NA	False	AATAAA	-27	NA	55770819	55780230	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_55771070_55772523_55772985_55776389_55776456_55779621
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044947	chr13	-	203	1	Intergenic	novelGene_1446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACATCTTTGACCTATGT	8911	False	NA	NA	False	NA	NA	NA	55775595	55775392	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_55775400_55775600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044951	chr13	+	211	1	Intergenic	novelGene_1447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATCTGAGGCTGGAGAG	NA	False	NA	NA	False	NA	NA	NA	55778205	55778416	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_55778200_55778400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044967	chr13	+	201	1	Intergenic	novelGene_1448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGTCAAACACATGCAC	NA	False	NA	NA	False	NA	NA	NA	55818813	55819014	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_55818800_55819000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044975	chr13	+	178	1	Intergenic	novelGene_1449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGCCAGGGGCCTAGTT	NA	False	NA	NA	False	NA	NA	NA	55838680	55838858	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_55838700_55838900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044986	chr13	+	4678	2	FSM	ENSMUSG00000045767.10	ENSMUST00000057844.10	4652	2	-26	0	-26	0	multi-exon	FALSE	canonical	3	233	junction_1	0	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTACTACTTTATTTT	NA	False	NA	19	True	AATAAA	-19	NA	55840910	55851313	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_55841161_55846885
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000044996	chr13	+	171	1	Intergenic	novelGene_1450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAACAAGGGCTTTCAGAG	NA	False	NA	NA	False	NA	NA	NA	55859411	55859582	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_55859400_55859600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045008	chr13	+	1489	5	FSM	ENSMUSG00000021497.11	ENSMUST00000021959.11	1527	5	44	-6	44	6	multi-exon	FALSE	canonical	3	237	junction_2	13.4257215820976	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTCGCTTGTTTCTGG	NA	False	NA	24	True	AATAAA	-20	NA	55862506	55874046	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_55862658_55865604_55866081_55869391_55869556_55872320_55872452_55873479
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045017	chr13	+	561	4	FSM	ENSMUSG00000021496.13	ENSMUST00000124968.8	546	4	-15	0	-15	0	multi-exon	FALSE	canonical	3	322	junction_3	31.7210060089875	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAGTTATTTGTCATTA	NA	False	NA	15	True	AATACA	-18	NA	55875165	55924643	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_55875288_55880748_55880881_55923179_55923261_55924417
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045031	chr13	+	206	1	Intergenic	novelGene_1451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACTGAACAAGGAGAATCA	1327	False	NA	NA	False	NA	NA	NA	55906626	55906832	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_55906600_55906800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045039	chr13	+	196	1	Intergenic	novelGene_1452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACAAAGTTTTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	55921820	55922016	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_55921800_55922000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045045	chr13	+	214	1	Intergenic	novelGene_1453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTTCCAGCAGGAAGG	7587	False	NA	NA	False	AATGAA	-17	NA	55936918	55937132	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_55936900_55937100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045074	chr13	+	190	1	Intergenic	novelGene_1454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGGAAAGAAAGGTATG	NA	False	NA	NA	False	NA	NA	NA	56315198	56315388	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_56315200_56315400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045091	chr13	+	2748	17	FSM	ENSMUSG00000035493.11	ENSMUST00000045173.10	2714	17	-35	1	28	-1	multi-exon	FALSE	canonical	3	51	junction_1	6.48917367620871	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTGTGCTAGCTGCGT	9390	False	NA	NA	False	AATAAA	-15	NA	56757363	56787170	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_56757594_56762052_56762152_56771372_56771438_56773012_56773174_56773462_56773628_56773846_56773994_56775726_56775869_56777430_56777644_56778356_56778495_56779042_56779189_56779862_56780000_56780671_56780803_56783378_56783504_56784378_56784482_56784950_56785031_56785833_56785859_56786529
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045107	chr13	+	196	1	Intergenic	novelGene_1455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGAAGATAGTATGTCC	NA	False	NA	NA	False	NA	NA	NA	57528609	57528805	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_57528600_57528800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045122	chr13	+	712	4	FSM	ENSMUSG00000050002.15	ENSMUST00000109868.4	1462	4	6	744	6	3	multi-exon	FALSE	canonical	3	143	junction_3	23.6220236220354	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGCTGTACTGTAAATTC	NA	False	NA	5	True	NA	NA	NA	58305473	58311763	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_58305551_58307690_58307722_58307965_58308053_58311246
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045133	chr13	-	3691	11	FSM	ENSMUSG00000005312.16	ENSMUST00000058735.12	3686	11	-4	-1	-4	1	multi-exon	FALSE	canonical	3	817	junction_3	227.671803260746	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTCGCCTCTTTTGTAG	1723	False	NA	-1	True	AATAAA	-21	NA	58363471	58323968	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_58325843_58327041_58327208_58327366_58327483_58328635_58328720_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045135	chr13	-	3606	10	FSM	ENSMUSG00000005312.16	ENSMUST00000076454.8	3561	10	-38	-7	-4	0	multi-exon	FALSE	canonical	3	487	junction_3	294.557588324433	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTCGCCTCTTTTGTA	1723	False	NA	-2	True	AATAAA	-20	NA	58363471	58323969	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_58325843_58327041_58327208_58327366_58327483_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045165	chr13	-	1180	4	FSM	ENSMUSG00000021550.7	ENSMUST00000022032.7	3051	4	9	1862	9	-1862	multi-exon	TRUE	canonical	3	402	junction_2	21.2289111041209	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTGCACGCCTTTAGT	NA	False	NA	-14	True	TATAAA	-22	NA	58533030	58529492	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_58529824_58530221_58530418_58531963_58532224_58532637
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045177	chr13	-	2749	16	NIC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	-2	5	combination_of_known_junctions	FALSE	canonical	3	1429	junction_15	1716.40976718524	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTGTGTGTGTGA	5123	False	NA	-3	True	AATACA	-20	NA	58549958	58538950	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045185	chr13	-	2860	16	FSM	ENSMUSG00000021546.19	ENSMUST00000224182.2	2754	16	-8	-98	-8	5	multi-exon	FALSE	canonical	3	4568	junction_3	976.692573035253	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTGTGTGTGTGA	4743	False	NA	-3	True	AATACA	-20	NA	58550338	58538950	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045236	chr13	-	2624	15	FSM	ENSMUSG00000021546.19	ENSMUST00000176207.8	2653	15	132	-103	-1	1	multi-exon	FALSE	canonical	3	308	junction_9	1988.3049647006	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGTGTGCCCAATTTGAA	4750	False	NA	-18	True	AATAAA	-20	NA	58550331	58539047	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045262	chr13	-	2677	16	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	3	328	junction_3	1878.87941307815	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGACGTGTGCCCAATT	4750	False	NA	-22	True	AATAAA	-16	NA	58550331	58539051	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr13_-_58540231_58541009_58541180_58541505_58541574_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045272	chr13	-	2682	15	FSM	ENSMUSG00000021546.19	ENSMUST00000177019.8	2626	15	-55	-1	-3	1	multi-exon	FALSE	canonical	3	308	junction_9	1943.30427759168	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGACGTGTGCCCAATT	4748	False	NA	-22	True	AATAAA	-16	NA	58550333	58539051	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045284	chr13	-	2291	16	NIC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	3	132	junction_15	1977.57133429422	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	5722	False	NA	-5	True	AATAAA	-14	NA	58549359	58539763	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58548923
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045338	chr13	+	2546	4	NNC	ENSMUSG00000035367.10	novel	2447	4	NA	NA	-90	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	169.267703817224	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAAGAATGTTTATATT	NA	False	NA	22	True	AATAAA	-35	NA	58550423	58557912	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr13_+_58550604_58552381_58552470_58554815_58554905_58555723
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045355	chr13	+	176	1	Intergenic	novelGene_1456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCCTGAGTGAGCAGAGT	NA	False	NA	NA	False	NA	NA	NA	58621358	58621534	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_58621400_58621500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045361	chr13	-	167	1	Intergenic	novelGene_1457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGCCCTTTATAAGACTT	NA	False	NA	NA	False	NA	NA	NA	58650757	58650590	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_58650600_58650800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045365	chr13	-	186	1	Intergenic	novelGene_1458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAATAAAATTAATTAATTA	NA	False	NA	NA	False	NA	NA	NA	58794710	58794524	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_58794500_58794700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045381	chr13	+	189	1	Intergenic	novelGene_1459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCACTATAGTGCCTTCT	NA	False	NA	NA	False	NA	NA	NA	59285136	59285325	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_59285100_59285300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045387	chr13	+	195	1	Intergenic	novelGene_1460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTATTTTATGTTTATG	NA	False	NA	NA	False	NA	NA	NA	59722516	59722711	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_59722500_59722700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045397	chr13	+	2663	23	FSM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	6	1124	6	46	multi-exon	FALSE	canonical	3	649	junction_6	70.4314478267713	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1216	False	NA	67	True	AATAAA	-29	NA	59733114	59782612	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045406	chr13	+	2489	22	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-3	46	combination_of_known_junctions	FALSE	canonical	3	36	junction_9	170.857036683091	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1306	False	NA	67	True	AATAAA	-29	NA	59733204	59782612	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045413	chr13	+	2845	23	NNC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	30	46	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	170.650075731326	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1365	False	NA	67	True	AATAAA	-29	NA	59733263	59782612	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr13_+_59733605_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045422	chr13	-	3613	10	FSM	ENSMUSG00000021556.13	ENSMUST00000022039.7	3954	10	-29	370	-29	0	multi-exon	TRUE	canonical	3	421	junction_9	46.3947102135844	397	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTAGGGTTGTTTGGTGT	NA	False	NA	-5	True	AATAAA	-22	NA	59823654	59782809	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59823540
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045459	chr13	-	5470	27	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_26	23.0564011314883	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATCCACATTATTTTCT	NA	False	NA	-4	True	AATAAA	-21	NA	59970941	59919689	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970894
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045460	chr13	-	5548	27	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_26	20.4582125694906	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATCCACATTATTTTCT	NA	False	NA	-4	True	AATAAA	-21	NA	59970914	59919689	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970789
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045479	chr13	+	5907	26	FSM	ENSMUSG00000021559.15	ENSMUST00000077453.13	5491	26	-31	-385	-21	-5	multi-exon	TRUE	canonical	3	41	junction_19	8.36334861165072	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTGTCTAGTCCTTGA	9800	False	NA	NA	False	AATAAA	-16	NA	60749739	60911000	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_60749925_60750238_60750411_60844044_60844267_60864491_60864631_60865827_60865958_60866115_60866165_60866250_60866278_60867423_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60908448
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045495	chr13	-	179	2	Antisense	novelGene_ENSMUSG00000113626.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCAACTTCTTATAATTCC	8799	False	NA	NA	False	NA	NA	NA	61990744	61990385	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr13_-_61990481_61990660
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045510	chr13	+	3177	4	FSM	ENSMUSG00000113566.2	ENSMUST00000222324.2	886	4	-28	-2263	-6	2193	multi-exon	FALSE	canonical	3	481	junction_1	27.9801516952444	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTCTATATTATTT	NA	False	NA	NA	False	AATATA	-14	NA	62245555	62262054	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_62245653_62254561_62254689_62254881_62254943_62259162
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045517	chr13	+	1196	4	FSM	ENSMUSG00000113566.2	ENSMUST00000222089.2	478	4	-5	-713	-5	289	multi-exon	FALSE	canonical	3	66	junction_3	212.90112467737	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTAATGGTGTC	NA	False	NA	7	True	NA	NA	NA	62245556	62260150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_62245653_62254561_62254689_62254881_62254943_62259238
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045519	chr13	+	1566	5	NNC	ENSMUSG00000113566.2	novel	886	4	NA	NA	-5	289	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_2	230.419590095981	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTAATGGTGTC	NA	False	NA	7	True	NA	NA	NA	62245556	62260150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr13_+_62245653_62250218_62250513_62254561_62254689_62254881_62254943_62259162
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045530	chr13	+	3128	4	FSM	ENSMUSG00000074867.5	ENSMUST00000099449.4	2571	4	-38	-519	-8	519	multi-exon	FALSE	canonical	3	81	junction_1	97.7422915403335	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTGTGGACCAGTCG	NA	False	NA	NA	False	NA	NA	NA	62277691	62321752	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_62277843_62317255_62317383_62317567_62317629_62318963
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045543	chr13	+	178	1	Intergenic	novelGene_1461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAATGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	62338208	62338386	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_62338200_62338400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045547	chr13	+	211	1	Intergenic	novelGene_1462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTTAGGTGAAAACACT	NA	False	NA	NA	False	TTTAAA	-15	NA	62361627	62361838	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_62361600_62361800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045558	chr13	-	181	1	Intergenic	novelGene_1463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATGGTTTAAAATAA	NA	False	NA	NA	False	NA	NA	NA	62407360	62407179	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_62407200_62407400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045564	chr13	+	1523	4	NNC	ENSMUSG00000113081.2	novel	452	3	NA	NA	10	278	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	193.294823750893	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATGGCCCGTTGTTTAT	NA	False	NA	14	True	AATAAA	-16	NA	62411389	62423345	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr13_+_62411510_62420579_62420707_62420906_62420968_62422130
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045570	chr13	+	437	3	FSM	ENSMUSG00000113081.2	ENSMUST00000221637.2	452	3	20	-5	20	5	multi-exon	FALSE	canonical	3	513	junction_2	20.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGGTATCTGAATTTTC	NA	False	NA	18	True	NA	NA	NA	62411399	62421106	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_62411510_62420579_62420707_62420906
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045581	chr13	-	2913	4	Fusion	ENSMUSG00000094942.8_ENSMUSG00000113450.2	novel	2310	4	NA	NA	0	614	multi-exon	FALSE	canonical	3	23	junction_1	26.1661358757205	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGCTGATATGCATCCT	9551	False	NA	NA	False	NA	NA	NA	62614607	62515527	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr13_-_62518166_62519376_62519438_62519623_62519751_62614520
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045592	chr13	-	2316	4	FSM	ENSMUSG00000094942.8	ENSMUST00000187656.7	2310	4	-6	0	-6	0	multi-exon	FALSE	canonical	3	23	junction_1	23.1708629293104	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTGTGGATCAGTCG	NA	False	NA	-12	True	NA	NA	NA	62530997	62516141	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_62518166_62519376_62519438_62519623_62519751_62530893
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045615	chr13	-	1873	6	NNC	ENSMUSG00000113623.2	novel	633	4	NA	NA	12	419	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	65.1717730309679	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCACGTATAAAACTTTGG	NA	False	NA	NA	False	ATTAAA	-24	NA	62564845	62549887	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr13_-_62551194_62555228_62555290_62555482_62555610_62559530_62559782_62559978_62560013_62564751
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045622	chr13	+	193	1	Intergenic	novelGene_1464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATCCTTTCCCTGTTAC	NA	False	NA	NA	False	NA	NA	NA	62562117	62562310	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_62562100_62562300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045631	chr13	-	2029	4	FSM	ENSMUSG00000113450.2	ENSMUST00000221747.2	2492	4	8	455	8	1	multi-exon	FALSE	canonical	3	15	junction_1	11.5566238822398	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTGCATATCACAGTTAT	9520	False	NA	-3	True	NA	NA	NA	62614638	62601284	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_62603008_62604500_62604562_62604746_62604874_62614520
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045639	chr13	+	203	1	Intergenic	novelGene_1465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTTACTGCAATGCTTA	NA	False	NA	NA	False	NA	NA	NA	62647223	62647426	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_62647200_62647400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045650	chr13	+	193	1	Intergenic	novelGene_1466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTATCAGTGCCACAATC	NA	False	NA	NA	False	NA	NA	NA	62661180	62661373	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_62661200_62661400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045657	chr13	-	2198	4	NNC	ENSMUSG00000074865.12	novel	2147	4	NA	NA	-81977	0	intron_retention	FALSE	canonical	3	28	junction_3	21.3124898175277	32	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGTGTGGACCAGTCA	NA	False	NA	NA	False	NA	NA	NA	62800990	62664608	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr13_-_62666545_62667985_62668047_62668231_62668359_62800916
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045678	chr13	-	213	2	Antisense	novelGene_ENSMUSG00000118956.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGGTGGTTTCTTATCCT	NA	False	NA	NA	False	NA	NA	NA	62945026	62764591	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr13_-_62764761_62944982
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045688	chr13	-	2467	4	FSM	ENSMUSG00000074863.6	ENSMUST00000221999.2	615	4	-27	-1825	0	0	multi-exon	FALSE	canonical	3	52	junction_3	44.0176732183285	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGTTCCTGGGAAAAAAC	NA	False	NA	1	True	AATAAA	-20	NA	62832759	62819597	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_62821755_62823062_62823124_62823332_62823469_62832646
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045700	chr13	-	2654	4	FSM	ENSMUSG00000091183.6	ENSMUST00000201047.4	3279	4	9	616	9	-616	multi-exon	TRUE	canonical	3	25	junction_3	2.05480466765633	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTGGACCAGTTGT	NA	False	NA	3	True	NA	NA	NA	62933613	62920629	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_62922977_62924530_62924592_62924776_62924904_62933494
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045703	chr13	+	199	1	Intergenic	novelGene_1467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGACCATGTAGAGACTA	NA	False	NA	NA	False	NA	NA	NA	62944827	62945026	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_62944800_62945000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045707	chr13	-	1339	7	FSM	ENSMUSG00000021456.9	ENSMUST00000021907.9	1354	7	15	0	15	0	multi-exon	FALSE	canonical	3	121	junction_2	7.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTTATGGGTCTTCTG	NA	False	NA	2	True	AATAAA	-20	NA	63006221	62984690	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_62985095_62988084_62988205_62989599_62989738_62997190_62997332_63001787_63001881_63002717_63002881_63005941
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045731	chr13	-	2920	15	FSM	ENSMUSG00000021461.18	ENSMUST00000161977.8	3111	15	-23	214	-2	1	multi-exon	TRUE	canonical	3	59	junction_14	18.8014599954148	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGACCTTCCTACTCC	NA	False	NA	-5	True	AATAAA	-19	NA	63579561	63459566	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63579263
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045741	chr13	-	186	1	Intergenic	novelGene_1468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACTGAGCCCAGCTGTA	NA	False	NA	NA	False	NA	NA	NA	63605475	63605289	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_63605300_63605500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045758	chr13	+	177	1	Intergenic	novelGene_1469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATGCCTCCAGAAT	NA	False	NA	NA	False	NA	NA	NA	63763054	63763231	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_63763100_63763200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045765	chr13	-	186	1	Intergenic	novelGene_1470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTCTCATTGAACCGTG	5653	False	NA	NA	False	NA	NA	NA	63809487	63809301	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_63809300_63809500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045771	chr13	+	5584	19	FSM	ENSMUSG00000021470.20	ENSMUST00000238465.2	4614	19	-171	-799	1	0	multi-exon	TRUE	canonical	3	68	junction_14	17.5231768921923	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTTTCATCGAATTTAAT	NA	False	NA	9	True	AATAAA	-20	NA	63963117	64048116	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013771_64013872_64016839_64016993_64018502_64018584_64019609_64020742_64025192_64025348_64042451_64042634_64046347
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045788	chr13	-	2294	12	FSM	ENSMUSG00000033114.12	ENSMUST00000099441.6	2303	12	9	0	9	0	multi-exon	FALSE	canonical	3	80	junction_8	14.1169846708972	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTTATGGTTTTTGGTT	NA	False	NA	-1	True	NA	NA	NA	64277160	64244121	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_64245499_64246128_64246212_64247083_64247163_64252546_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64266229_64266298_64268408_64268496_64270132_64270167_64276999
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045798	chr13	-	176	1	Intergenic	novelGene_1471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	NA	False	NA	NA	False	NA	NA	NA	64259789	64259613	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_64259600_64259800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045804	chr13	-	184	1	Intergenic	novelGene_1472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTACCATGTTTAAGAAC	NA	False	NA	NA	False	NA	NA	NA	64261071	64260887	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_64260900_64261100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045807	chr13	-	3600	5	FSM	ENSMUSG00000044934.14	ENSMUST00000059817.12	3532	5	-68	0	-68	0	multi-exon	FALSE	canonical	3	41	junction_4	7.32717544487642	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATGGGTCATTCTTACA	5982	False	NA	NA	False	AATAAA	-26	NA	64301084	64280831	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_64283351_64290021_64290161_64291968_64292089_64293343_64293495_64300413
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045817	chr13	+	2584	8	FSM	ENSMUSG00000021476.10	ENSMUST00000021929.10	2564	8	-20	0	-20	0	multi-exon	FALSE	canonical	3	140	junction_6	9.99183340002612	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGCCTTATTCATTTTC	NA	False	NA	NA	False	ATTAAA	-19	NA	64309662	64334351	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_64310149_64317827_64317991_64321876_64322036_64322603_64322673_64323818_64323903_64329920_64330093_64332386_64332573_64333086
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045836	chr13	+	184	1	Intergenic	novelGene_1473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTAACAGGATTTCTGA	858	False	NA	NA	False	NA	NA	NA	64371311	64371495	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_64371300_64371500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045841	chr13	+	190	1	Intergenic	novelGene_1474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGATTCTCACACACGCA	NA	False	NA	NA	False	NA	NA	NA	64387570	64387760	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_64387600_64387800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045852	chr13	-	3016	6	FSM	ENSMUSG00000021482.11	ENSMUST00000222570.2	3011	6	-20	15	-20	6	multi-exon	TRUE	canonical	3	150	junction_1	21.3672646822189	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGTTTGGGTTATTTT	NA	False	NA	-15	True	AATAAA	-33	NA	64460544	64437625	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_64440043_64445068_64445201_64456635_64456742_64456906_64456961_64460080_64460150_64460306
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045859	chr13	+	180	1	Intergenic	novelGene_1475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTTATCAAATGTTGCT	NA	False	NA	NA	False	NA	NA	NA	64451924	64452104	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_64451900_64452100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045864	chr13	+	175	1	Intergenic	novelGene_1476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTTTGTAAGCACATAC	NA	False	NA	NA	False	NA	NA	NA	64458893	64459068	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_64458900_64459100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045886	chr13	-	173	1	Intergenic	novelGene_1477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTAATAAACTCCAGTT	3499	False	NA	NA	False	NA	NA	NA	64621295	64621122	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_64621100_64621300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045893	chr13	+	187	1	Intergenic	novelGene_1478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCATGAGAGCAGGGAAT	NA	False	NA	NA	False	NA	NA	NA	65179356	65179543	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_65179400_65179500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045898	chr13	-	3479	12	FSM	ENSMUSG00000038212.17	ENSMUST00000155487.8	3832	12	-13	366	-13	117	multi-exon	FALSE	canonical	3	418	junction_6	41.7491525128019	456	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGTTTCTTGAAAATC	NA	False	NA	0	True	ATTAAA	-20	NA	65260802	65212842	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045917	chr13	-	3554	11	FSM	ENSMUSG00000032999.11	ENSMUST00000221659.2	3551	11	0	-3	0	2	multi-exon	FALSE	canonical	3	10	junction_10	15.0253119767944	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTACTGACTTCTAATCTC	NA	False	NA	-10	True	ATTAAA	-21	NA	65353782	65324927	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_65325478_65329342_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338792_65341799_65343370_65346982_65347285_65353433_65353531_65353752
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045928	chr13	+	190	1	Intergenic	novelGene_1479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCATCAGCAAGCATCCA	NA	False	NA	NA	False	NA	NA	NA	65352220	65352410	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_65352200_65352400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045935	chr13	-	2735	5	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-3	-339	at_least_one_novel_splicesite	TRUE	canonical	3	20	junction_1	33.8110558841335	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	7278	False	NA	NA	False	NA	NA	NA	65496414	65484374	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr13_-_65486220_65486639_65487225_65488362_65488424_65488791_65488919_65496297
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045951	chr13	+	197	1	Intergenic	novelGene_1480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTACTAGAGAATTCACGGA	NA	False	NA	NA	False	NA	NA	NA	65521803	65522000	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_65521800_65522000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045955	chr13	+	197	1	Intergenic	novelGene_1481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTACTAGAGAATTCACGGA	NA	False	NA	NA	False	NA	NA	NA	65588875	65589072	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_65588900_65589100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045963	chr13	+	3154	4	Fusion	ENSMUSG00000063905.3_ENSMUSG00000113008.2	novel	327	2	NA	NA	-8753	-233	multi-exon	FALSE	canonical	3	7	junction_1	10.8730042868667	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	3	True	NA	NA	NA	65651738	65662559	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr13_+_65651859_65658192_65658320_65658519_65658581_65659713
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045968	chr13	-	3166	4	Antisense	novelGene_ENSMUSG00000113618.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	22.1560124771785	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	2	True	NA	NA	NA	65705525	65693382	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr13_-_65696241_65697380_65697442_65697641_65697769_65705405
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045978	chr13	+	199	1	Intergenic	novelGene_1482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACATTCCTCAGGAAGAC	NA	False	NA	NA	False	NA	NA	NA	65730713	65730912	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_65730700_65730900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045984	chr13	+	187	1	Intergenic	novelGene_1483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAGACATTAAAATTTAAAT	NA	False	NA	NA	False	NA	NA	NA	65784968	65785155	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_65785000_65785200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000045999	chr13	+	190	1	Intergenic	novelGene_1484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTTAAATATAAAAAACTCC	NA	False	NA	NA	False	NA	NA	NA	65883516	65883706	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_65883500_65883700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046003	chr13	-	3158	5	Intergenic	novelGene_1485	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	83.0523178484502	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	65960874	65950179	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_65952465_65952549_65953125_65954300_65954362_65954561_65954689_65960764
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046008	chr13	-	197	1	Intergenic	novelGene_1486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTACTAGAGAATTCACGGA	9370	False	NA	NA	False	NA	NA	NA	66018117	66017920	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_66017900_66018100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046016	chr13	+	229	1	Intergenic	novelGene_1487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTGAACCATATGGTTAT	NA	False	NA	NA	False	NA	NA	NA	66043573	66043802	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_66043600_66043800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046033	chr13	+	3168	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-39	1321	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	91.7234293951115	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	66261254	66271971	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269602_66269686
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046034	chr13	+	3253	4	FSM	ENSMUSG00000095909.3	ENSMUST00000238623.2	1525	4	-39	-1689	-39	1321	multi-exon	FALSE	canonical	3	113	junction_1	62.9620697104393	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	66261254	66271971	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046056	chr13	-	2625	5	NNC	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7307	967	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	30.4415423393756	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	1887	False	NA	-1	True	NA	NA	NA	66439272	66427982	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr13_-_66429686_66429768_66430404_66431569_66431631_66431830_66431958_66439173
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046065	chr13	-	2749	4	NNC	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7348	967	intron_retention	FALSE	canonical	3	55	junction_2	9.53356643071673	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	1846	False	NA	-1	True	NA	NA	NA	66439313	66427982	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr13_-_66430404_66431569_66431631_66431830_66431958_66439173
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046083	chr13	-	586	4	NNC	ENSMUSG00000074832.12	novel	2587	4	NA	NA	-7	172	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	71.3411210702184	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	0	True	NA	NA	NA	66589186	66577778	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr13_-_66578071_66581478_66581540_66581739_66581867_66589080
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046088	chr13	-	2838	4	FSM	ENSMUSG00000074832.12	ENSMUST00000172579.4	2587	4	-79	-172	-39	172	multi-exon	FALSE	canonical	3	86	junction_1	43.8254111979188	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	0	True	NA	NA	NA	66589218	66577778	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_66580291_66581478_66581540_66581739_66581867_66589080
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046093	chr13	-	3994	3	ISM	ENSMUSG00000074832.12	ENSMUST00000173583.8	515	5	-7	11606	-7	172	5prime_fragment	FALSE	canonical	3	147	junction_1	23	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	0	True	NA	NA	NA	66589186	66577778	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr13_-_66581540_66581739_66581867_66589080
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046111	chr13	+	465	4	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9011	721	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_3	16.3299316185545	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	5534	False	NA	11	True	NA	NA	NA	66711973	66724696	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr13_+_66712084_66720982_66721110_66721308_66721370_66724529
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046136	chr13	+	2947	3	NNC	ENSMUSG00000114226.2	novel	818	2	NA	NA	-24302	477	intron_retention	FALSE	canonical	3	24	junction_2	9	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAAATAAAGTTTCTTC	NA	False	NA	NA	False	AATAAA	-24	NA	66901202	66927683	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr13_+_66901313_66924718_66927256_66927383
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046142	chr13	-	2379	5	NNC	ENSMUSG00000114353.2	novel	464	4	NA	NA	0	884	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	67.8762661023719	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	1	True	NA	NA	NA	66950624	66939249	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr13_-_66940626_66940876_66941596_66942701_66942763_66942962_66943090_66950528
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046149	chr13	-	2630	4	FSM	ENSMUSG00000114353.2	ENSMUST00000224917.2	464	4	0	-2166	0	884	multi-exon	FALSE	canonical	3	149	junction_1	5.73488351136175	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	1	True	NA	NA	NA	66950624	66939249	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_66941596_66942701_66942763_66942962_66943090_66950528
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046161	chr13	-	221	1	Intergenic	novelGene_1488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTGAACCATATGGTTAT	NA	False	NA	NA	False	NA	NA	NA	67011600	67011379	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_67011400_67011600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046174	chr13	-	540	4	FSM	ENSMUSG00000021520.5	ENSMUST00000021993.5	535	4	15	-20	15	20	multi-exon	FALSE	canonical	3	4784	junction_3	381.861231339344	340	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAACGCCTACTGTCATA	7727	False	NA	-5	True	AATAAA	-38	NA	67053427	67048660	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_67048891_67049465_67049633_67050793_67050866_67053356
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046178	chr13	-	1389	8	NIC	ENSMUSG00000021519.12	novel	784	5	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	116.048898912379	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTATGTATCAGCAACTAAT	424	False	NA	NA	False	AATAAA	-20	NA	67081105	67055029	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_-_67055248_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67077948_67078288_67080998
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046180	chr13	-	1497	8	FSM	ENSMUSG00000021519.12	ENSMUST00000021991.11	1479	8	5	-23	5	23	multi-exon	FALSE	canonical	3	328	junction_6	16.4005973012185	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTTCTCATAATTCCC	382	False	NA	NA	False	AATAAA	-41	NA	67081147	67060158	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_67060443_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67077948_67078288_67080998
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046193	chr13	-	2359	4	FSM	ENSMUSG00000021519.12	ENSMUST00000174011.8	2353	4	-3	-3	0	3	multi-exon	FALSE	canonical	3	328	junction_2	10.2306728354819	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGTCATTACTGTTTTT	424	False	NA	NA	False	AATAAA	-18	NA	67081105	67069249	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_67071010_67076233_67076387_67077948_67078288_67080998
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046197	chr13	+	3047	13	FSM	ENSMUSG00000021518.5	ENSMUST00000021990.4	3424	13	-13	390	-13	-115	multi-exon	FALSE	canonical	3	153	junction_7	19.2476549798209	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTGTTAGAATGATGT	7845	False	NA	31	True	ATTAAA	-17	NA	67080880	67146075	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_67081751_67093340_67093433_67101583_67101629_67104445_67104571_67111376_67111536_67114453_67114606_67120557_67120700_67122508_67122622_67124809_67124876_67135817_67135918_67142016_67142086_67143410_67143481_67145031
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046206	chr13	+	193	1	Intergenic	novelGene_1489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCCCACTGCCTCAGGA	9272	False	NA	NA	False	NA	NA	NA	67137507	67137700	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_67137500_67137700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046211	chr13	-	179	1	Intergenic	novelGene_1490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATTCTCAACTGTA	NA	False	NA	NA	False	NA	NA	NA	67322308	67322129	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_67322100_67322300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046218	chr13	+	194	1	Intergenic	novelGene_1491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGACCGGAGGACCCCA	NA	False	NA	NA	False	NA	NA	NA	67377044	67377238	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_67377000_67377200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046227	chr13	+	189	1	Intergenic	novelGene_1492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAACAGGAAATCAA	NA	False	NA	NA	False	NA	NA	NA	67417660	67417849	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_67417700_67417800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046230	chr13	+	198	1	Intergenic	novelGene_1493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTTGCCCAAGCTAGC	NA	False	NA	NA	False	NA	NA	NA	67550691	67550889	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_67550700_67550900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046247	chr13	-	1778	4	FSM	ENSMUSG00000069206.15	ENSMUST00000075255.6	3238	4	-15	1475	-15	347	multi-exon	FALSE	canonical	3	47	junction_1	29.1699998095456	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTAGAGCTTACATTCCA	9923	False	NA	NA	False	AAGAAA	-28	NA	67599758	67590026	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_67591454_67596939_67597036_67597468_67597596_67599630
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046255	chr13	-	2328	4	FSM	ENSMUSG00000071291.11	ENSMUST00000076123.12	2391	4	63	0	-5	0	multi-exon	FALSE	canonical	3	37	junction_3	4.08248290463863	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTCTTTGGTCATGCCA	NA	False	NA	-1	True	NA	NA	NA	67648611	67638286	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_67640270_67642125_67642222_67642721_67642849_67648489
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046262	chr13	-	2634	4	FSM	ENSMUSG00000097333.8	ENSMUST00000181767.8	2656	4	22	0	-9	0	multi-exon	FALSE	canonical	3	34	junction_2	7.71722460186015	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTGGTCATAGTGTTTA	9244	False	NA	NA	False	NA	NA	NA	67674274	67663899	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_67666232_67668744_67668841_67669311_67669439_67674195
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046274	chr13	-	4004	4	FSM	ENSMUSG00000095432.10	ENSMUST00000181892.9	5293	4	692	597	0	-597	multi-exon	FALSE	canonical	3	55	junction_1	6.68331255192114	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTAGTCATGGCATTTA	NA	False	NA	0	True	NA	NA	NA	67701257	67687356	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_67691030_67693442_67693539_67694743_67694871_67701149
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046280	chr13	-	4837	4	FSM	ENSMUSG00000058093.14	ENSMUST00000138725.3	855	4	8	-3990	8	0	multi-exon	FALSE	canonical	3	11	junction_3	22.5437845585479	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTTTGGTGTCTCTTC	NA	False	NA	-4	True	NA	NA	NA	67757798	67737557	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_67742035_67743334_67743431_67744767_67744895_67757661
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046306	chr13	-	3992	4	FSM	ENSMUSG00000071281.13	ENSMUST00000130891.3	1103	4	-6	-2883	-6	3	multi-exon	TRUE	canonical	3	31	junction_1	3.85861230093008	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTATTTTATTTATGAG	NA	False	NA	2	True	NA	NA	NA	67872451	67853424	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_67857049_67858433_67858530_67858999_67859127_67872306
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046318	chr13	-	168	1	Intergenic	novelGene_1494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAAGTCCGGTTTTCG	NA	False	NA	NA	False	NA	NA	NA	67946745	67946577	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_67946600_67946700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046326	chr13	+	195	1	Intergenic	novelGene_1495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGATCCCTTTTCCCTCG	NA	False	NA	NA	False	NA	NA	NA	68138589	68138784	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_68138600_68138800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046334	chr13	-	179	1	Intergenic	novelGene_1496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAATAAGAGTTGC	NA	False	NA	NA	False	NA	NA	NA	68183989	68183810	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_68183800_68184000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046339	chr13	+	180	1	Intergenic	novelGene_1497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATAAGAGTTGCC	NA	False	NA	NA	False	NA	NA	NA	68340068	68340248	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_68340100_68340200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046347	chr13	-	179	1	Intergenic	novelGene_1498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAATAAGAGTTGC	NA	False	NA	NA	False	NA	NA	NA	68582717	68582538	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_68582500_68582700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046350	chr13	-	2768	1	Intergenic	novelGene_1499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGGTCTCAGTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	68592965	68590197	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_68590200_68593000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046356	chr13	-	3318	14	FSM	ENSMUSG00000034617.8	ENSMUST00000223101.2	2728	14	-5	-585	3	2	multi-exon	FALSE	canonical	3	76	junction_10	83.6727918422384	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTGAGGCTTTGTGGC	NA	False	NA	NA	False	ATTAAA	-27	NA	68730237	68708896	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68727661_68727816_68728669_68728835_68730183
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046359	chr13	-	3704	15	FSM	ENSMUSG00000034617.8	ENSMUST00000045827.5	3692	15	-16	4	12	-4	multi-exon	FALSE	canonical	3	277	junction_10	41.7021141733919	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAAGCTTGGTGAGGCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	68730256	68708902	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68730183
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046399	chr13	+	2355	7	FSM	ENSMUSG00000021532.12	ENSMUST00000051784.10	2421	7	10	56	-5	3	multi-exon	FALSE	canonical	3	43	junction_1	41.7053154086303	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAATTGTCCGTCTTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	68730376	68740401	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_68730470_68731657_68733122_68733296_68733383_68735778_68735954_68737438_68737509_68738224_68738340_68740049
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046408	chr13	+	178	1	Intergenic	novelGene_1500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAGTACATGCTTA	NA	False	NA	NA	False	NA	NA	NA	69287296	69287474	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_69287300_69287500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046429	chr13	+	192	1	Intergenic	novelGene_1501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTACCGGGTAAATGGG	NA	False	NA	NA	False	NA	NA	NA	69719671	69719863	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_69719700_69719900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046435	chr13	-	2638	5	FSM	ENSMUSG00000021594.12	ENSMUST00000091514.6	2644	5	6	0	6	0	multi-exon	FALSE	canonical	2	14	junction_3	7.15454401062709	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTATTGTTTGTCTTCAT	NA	False	NA	NA	False	AATAAA	-19	NA	69759555	69721567	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_69723316_69734703_69734855_69743034_69743137_69748349_69748517_69759085
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046455	chr13	+	898	4	FSM	ENSMUSG00000021598.10	ENSMUST00000022089.10	913	4	15	0	15	0	multi-exon	FALSE	canonical	3	786	junction_3	16.1314048434171	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATGTAATTCTTAAAAT	NA	False	NA	27	True	AATAAA	-23	NA	69957974	69964223	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_69958172_69959725_69959810_69961822_69961926_69963709
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046464	chr13	+	84	1	Intergenic	novelGene_1502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCGGACAAACATTCATAAA	NA	False	NA	NA	False	NA	NA	NA	70252361	70252445	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_70252400_70252400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046488	chr13	-	510	4	FSM	ENSMUSG00000021606.9	ENSMUST00000022097.6	568	4	58	0	-22	0	multi-exon	FALSE	canonical	3	2374	junction_2	33.95094500403	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGAGTTGTTTCTTCCTT	NA	False	NA	-3	True	AATAAA	-19	NA	73476603	73467992	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_73468180_73468412_73468536_73475534_73475589_73476457
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046507	chr13	+	3699	14	FSM	ENSMUSG00000021608.16	ENSMUST00000022099.15	3675	14	-24	0	-24	0	multi-exon	FALSE	canonical	3	461	junction_10	74.6226800557192	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTCGAGTGTGTTTTGT	NA	False	NA	23	True	AATAAA	-23	NA	73615291	73664541	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_73615637_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046518	chr13	+	177	1	Intergenic	novelGene_1503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAATAATGTGATT	NA	False	NA	NA	False	NA	NA	NA	73748574	73748751	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_73748600_73748800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046537	chr13	+	194	1	Intergenic	novelGene_1504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCAGGGGAGGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	73863629	73863823	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_73863600_73863800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046545	chr13	+	191	1	Intergenic	novelGene_1505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCTCTTCAGAGGTACT	NA	False	NA	NA	False	NA	NA	NA	73908901	73909092	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_73908900_73909100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046551	chr13	+	5185	24	FSM	ENSMUSG00000017756.10	ENSMUST00000017900.9	5142	24	-43	0	-43	0	multi-exon	FALSE	canonical	3	635	junction_9	57.8026758755535	418	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGTGCCTCATTTCCA	NA	False	NA	104	True	AGTAAA	-29	NA	73911772	73964873	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046567	chr13	-	2322	13	FSM	ENSMUSG00000021569.11	ENSMUST00000022053.11	3399	13	-14	1091	-14	20	multi-exon	FALSE	canonical	3	435	junction_6	23.4319345243955	188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTGCTTCAAGTGCTGTG	NA	False	NA	0	True	ATTAAA	-34	NA	74085917	74060556	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_74061459_74062606_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068554_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046579	chr13	+	2439	16	FSM	ENSMUSG00000057649.7	ENSMUST00000099384.4	2407	16	-32	0	-5	0	multi-exon	TRUE	canonical	3	92	junction_6	21.3306248280625	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCCCGTCCGCTTTGATG	NA	False	NA	29	True	AATAAA	-26	NA	74085924	74109014	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090809_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046601	chr13	-	2493	12	FSM	ENSMUSG00000021572.10	ENSMUST00000036456.8	3641	12	16	1132	16	0	multi-exon	FALSE	canonical	3	27	junction_5	28.6590098045136	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTCACTCTTTTTG	NA	False	NA	1	True	NA	NA	NA	74210402	74185750	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198178_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046616	chr13	-	2416	13	FSM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	5	2501	5	10	multi-exon	FALSE	canonical	3	174	junction_12	37.5695651055774	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGTGTGATGTCAGTTA	7178	False	NA	-1	True	ATTAAA	-21	NA	74356823	74320107	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025_74355217_74356776
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046631	chr13	-	175	1	Intergenic	novelGene_1506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAATAACCCTTTTG	NA	False	NA	NA	False	NA	NA	NA	74436700	74436525	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_74436500_74436700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046634	chr13	-	1112	6	FSM	ENSMUSG00000021576.7	ENSMUST00000022060.7	1131	6	19	0	-18	0	multi-exon	FALSE	canonical	3	601	junction_2	85.1666601435092	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGGCTGGTTTTTTGCT	NA	False	NA	1	True	AATAAA	-25	NA	74465421	74451627	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_74452168_74453659_74453770_74457802_74457962_74459786_74459832_74464448_74464511_74465225
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046651	chr13	-	2897	15	FSM	ENSMUSG00000021577.15	ENSMUST00000022062.8	2900	15	5	-2	5	2	multi-exon	FALSE	canonical	3	1480	junction_7	176.694897308026	1579	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTCAAGGTGTTCTAT	NA	False	NA	-6	True	NA	NA	NA	74498394	74470370	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046664	chr13	+	185	1	Intergenic	novelGene_1507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTACTTTTAAGGAAGCCA	572	False	NA	NA	False	NA	NA	NA	74494649	74494834	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_74494600_74494800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046671	chr13	+	3427	3	FSM	ENSMUSG00000021578.18	ENSMUST00000022063.14	9559	3	17	6115	9	-1027	multi-exon	FALSE	canonical	3	416	junction_2	9.5	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGATGATTTGTTTCTCAA	4367	False	NA	10	True	AATAAA	-21	NA	74498444	74507787	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_74498528_74500974_74501106_74504574
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046696	chr13	+	967	1	FSM	ENSMUSG00000062382.10	ENSMUST00000222435.2	938	1	-14	-15	-14	15	mono-exon	FALSE	NA	NA	NA	NA	NA	6140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAACTTTATTTATTTGTA	7948	False	NA	NA	False	NA	NA	NA	74554513	74555480	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_74554500_74555500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046761	chr13	-	2782	29	FSM	ENSMUSG00000021585.11	ENSMUST00000222588.2	4765	29	97	1886	10	1	multi-exon	TRUE	canonical	3	102	junction_28	16.6207701385947	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGCCTGAACTCTACT	NA	False	NA	NA	False	NA	NA	NA	74918758	74842372	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74918664
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046772	chr13	+	191	1	Intergenic	novelGene_1508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTGCAAAGACTTAATAA	NA	False	NA	NA	False	NA	NA	NA	74942938	74943129	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_74942900_74943100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046784	chr13	+	206	1	Intergenic	novelGene_1509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	536	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCATTGTTTAGCTCTG	NA	False	NA	NA	False	NA	NA	NA	75508672	75508878	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_75508700_75508900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046795	chr13	+	388	1	FSM	ENSMUSG00000074800.5	ENSMUST00000099371.5	276	1	-32	-80	-32	80	mono-exon	FALSE	NA	NA	NA	NA	NA	2026	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCAGGAAATGACTAATTG	3131	False	NA	NA	False	AATAAA	-40	NA	75792982	75793370	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_75793000_75793400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046800	chr13	+	3684	12	FSM	ENSMUSG00000001542.8	ENSMUST00000001583.8	4382	12	703	-5	-125	5	multi-exon	FALSE	canonical	3	343	junction_2	37.9194448472108	195	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTGACGTGTATCACT	6155	False	NA	NA	False	AATAAA	-34	NA	75855578	75920488	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_75855917_75873071_75873120_75894410_75894533_75898043_75898208_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046814	chr13	+	1312	3	FSM	ENSMUSG00000021591.9	ENSMUST00000022082.8	1345	3	33	0	0	0	multi-exon	FALSE	canonical	3	287	junction_1	16	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTGTCCGGTTCTGT	NA	False	NA	30	True	ATTAAA	-22	NA	75988019	75998270	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_75988295_75995288_75995418_75997362
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046865	chr13	-	3761	21	FSM	ENSMUSG00000021597.17	ENSMUST00000151524.9	3747	21	-14	0	-14	0	multi-exon	FALSE	canonical	3	56	junction_14	27.7961777947976	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATAGTCTTTAGTTG	NA	False	NA	-2	True	AATAAA	-22	NA	77283606	77191206	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77251599_77251744_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046879	chr13	+	3899	10	FSM	ENSMUSG00000064138.15	ENSMUST00000091459.12	3892	10	-2	-5	-2	5	multi-exon	TRUE	canonical	3	89	junction_7	8.92907582349531	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTCTTCTGTCTTCCTC	NA	False	NA	NA	False	AATAAA	-18	NA	77856806	78314359	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_77856973_77907546_77907649_77909956_77910058_77973441_77973508_77982628_77982821_78050772_78050995_78100103_78100224_78147704_78147822_78154506_78154592_78311631
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046900	chr13	+	4102	8	FSM	ENSMUSG00000074794.11	ENSMUST00000099356.10	4101	8	-1	0	-1	0	multi-exon	TRUE	canonical	3	173	junction_5	15.8461995701281	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGGCAGTTTATTTGA	NA	False	NA	30	True	AATAAA	-30	NA	81031527	81044161	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_81032049_81035524_81035607_81037207_81037356_81038214_81038318_81038652_81038910_81039180_81039344_81039606_81039762_81041488
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046915	chr13	+	4250	3	FSM	ENSMUSG00000035840.8	ENSMUST00000224300.2	4250	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	12	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGTTGTTGAATATAAT	289	False	NA	27	True	AATAAA	-29	NA	81805781	81820990	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_81806056_81813123_81813389_81817279
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046941	chr13	+	217	1	Intergenic	novelGene_1510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTCCACAATACTCATAT	NA	False	NA	NA	False	NA	NA	NA	81843286	81843503	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_81843300_81843500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046952	chr13	-	188	1	Intergenic	novelGene_1511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGCATGTTAAAGGAGG	NA	False	NA	NA	False	NA	NA	NA	81954914	81954726	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_81954700_81954900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046958	chr13	+	228	1	Intergenic	novelGene_1512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	370	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCTCCAGGAATCCAACAC	NA	False	NA	NA	False	NA	NA	NA	83064774	83065002	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_83064800_83065000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046966	chr13	+	2594	12	FSM	ENSMUSG00000035762.12	ENSMUST00000057495.10	2857	12	-8	271	-4	0	multi-exon	TRUE	canonical	0	0	junction_10	57.0470300398157	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTGTAATTTATTTGTT	NA	False	NA	21	True	ATTAAA	-22	NA	84370410	84443989	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_84370554_84399348_84399453_84405879_84405964_84408261_84408360_84420289_84420447_84430829_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000046982	chr13	+	2038	9	FSM	ENSMUSG00000021548.11	ENSMUST00000022030.11	2045	9	8	-1	8	1	multi-exon	FALSE	canonical	3	824	junction_5	83.2840583485219	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGTGTTTTGTTTTGAT	NA	False	NA	9	True	AATAAA	-20	NA	85337534	85361843	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047003	chr13	-	463	3	FSM	ENSMUSG00000017778.15	ENSMUST00000131011.2	540	3	82	-5	-48	5	multi-exon	FALSE	canonical	3	10515	junction_1	2196	370	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCGTCTCTGCAATAAG	NA	False	NA	-9	True	AATAAA	-21	NA	86194941	86192929	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_86193028_86193845_86193989_86194719
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047020	chr13	-	1480	8	FSM	ENSMUSG00000021615.14	ENSMUST00000022115.14	1540	8	72	-12	0	12	multi-exon	FALSE	canonical	3	129	junction_1	13.6993966796993	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAACTGAACTTTTTCTTT	NA	False	NA	5	True	AATAAA	-26	NA	90237655	89997027	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_89997583_90089080_90089229_90139191_90139284_90140572_90140726_90149036_90149204_90210127_90210304_90219659_90219809_90237615
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047038	chr13	+	137	1	FSM	ENSMUSG00000088308.3	ENSMUST00000157683.3	134	1	-1	-2	-1	2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATGGGAGGGCCTTCCTG	NA	False	NA	6	True	NA	NA	NA	90247098	90247235	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_90247100_90247200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047046	chr13	+	182	1	Intergenic	novelGene_1513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAGCTTGCGATCAAAC	NA	False	NA	NA	False	NA	NA	NA	90349349	90349531	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_90349300_90349500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047049	chr13	+	187	1	Intergenic	novelGene_1514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCCCCAGTTGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	90954726	90954913	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_90954700_90954900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047055	chr13	+	191	1	Intergenic	novelGene_1515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTATGAATCCTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	91005601	91005792	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_91005600_91005800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047067	chr13	+	779	4	FSM	ENSMUSG00000049517.9	ENSMUST00000051955.9	937	4	155	3	-104	-3	multi-exon	FALSE	canonical	3	13520	junction_1	3048.72640075601	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACCTGGTCTATAGGATA	NA	False	NA	24	True	AATAAA	-20	NA	91071231	91073066	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_91071319_91071705_91071866_91072444_91072566_91072655
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047075	chr13	+	177	1	Intergenic	novelGene_1516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATAATGTACTTC	NA	False	NA	NA	False	NA	NA	NA	91348892	91349069	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_91348900_91349100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047080	chr13	+	191	1	Intergenic	novelGene_1517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGTAGATAAATGATCG	NA	False	NA	NA	False	NA	NA	NA	91400335	91400526	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_91400300_91400500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047097	chr13	-	1542	6	FSM	ENSMUSG00000021621.16	ENSMUST00000022121.13	1541	6	-1	0	-1	0	multi-exon	FALSE	canonical	3	84	junction_2	29.1108227296997	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTGTTGAACTGATCA	NA	False	NA	NA	False	AATAAA	-16	NA	91955825	91944651	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_91945374_91946941_91947011_91948729_91948823_91948984_91949136_91953869_91954280_91955728
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047121	chr13	+	1562	6	FSM	ENSMUSG00000021707.6	ENSMUST00000022218.6	5347	6	420	3365	420	-3365	multi-exon	FALSE	canonical	3	1135	junction_5	174.184270242752	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTCATCTCAGCAGGGT	NA	False	NA	18	True	AATAAA	-21	NA	92491653	92522196	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92521232
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047127	chr13	+	213	1	Intergenic	novelGene_1518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	412	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACATAATGCATTGCCTG	6853	False	NA	NA	False	NA	NA	NA	92618026	92618239	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_92618000_92618200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047150	chr13	+	205	1	Intergenic	novelGene_1519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATTCAAGCTCAATGTT	5598	False	NA	NA	False	NA	NA	NA	92780622	92780827	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_92780600_92780800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047157	chr13	+	199	1	Intergenic	novelGene_1520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCCAAAGCTGTGCTGCA	NA	False	NA	NA	False	NA	NA	NA	92953520	92953719	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_92953500_92953700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047165	chr13	-	3114	15	FSM	ENSMUSG00000042167.7	ENSMUST00000048702.7	2990	15	-118	-6	-16	5	multi-exon	FALSE	canonical	3	135	junction_4	92.51905484928	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGGTGTTATTTTTCTGT	NA	False	NA	NA	False	AATAAA	-19	NA	93328909	93282784	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047175	chr13	-	3097	15	FSM	ENSMUSG00000042167.7	ENSMUST00000225868.2	3081	15	-16	0	-16	0	multi-exon	FALSE	canonical	3	122	junction_9	113.762104088007	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTGAGGTGTTATTTT	NA	False	NA	NA	False	AATAAA	-14	NA	93328909	93282789	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311215_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047189	chr13	+	4986	9	FSM	ENSMUSG00000007617.19	ENSMUST00000060490.11	2765	9	-1048	-1173	9	-166	multi-exon	FALSE	canonical	3	36	junction_8	6.10199762372946	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTCTCTGGAGAATGTA	NA	False	NA	8	True	AATACA	-20	NA	93440618	93541471	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447_93492588_93524031_93524189_93528198_93528310_93529535_93529617_93538548
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047193	chr13	+	182	1	Intergenic	novelGene_1521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACAGGCTTCTATGCCCA	NA	False	NA	NA	False	NA	NA	NA	93700058	93700240	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_93700100_93700200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047198	chr13	+	185	1	Intergenic	novelGene_1522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAGTTTACACTGTA	NA	False	NA	NA	False	NA	NA	NA	93751464	93751649	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_93751500_93751600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047210	chr13	+	189	1	Intergenic	novelGene_1523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAGTATTATAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	93766575	93766764	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_93766600_93766800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047232	chr13	-	3734	9	FSM	ENSMUSG00000021687.15	ENSMUST00000022197.15	4259	9	402	123	402	-123	multi-exon	FALSE	canonical	3	91	junction_5	9.45300878027732	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTTTGTATAATTTTA	NA	False	NA	-1	True	AATAAA	-16	NA	94421935	94337940	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_94340672_94344643_94344762_94347084_94347187_94361402_94361563_94366221_94366351_94368579_94368689_94369589_94369689_94389500_94389579_94421727
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047241	chr13	+	197	1	Intergenic	novelGene_1524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAATTTCTATATATAAA	NA	False	NA	NA	False	NA	NA	NA	94440457	94440654	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_94440500_94440700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047265	chr13	+	535	4	FSM	ENSMUSG00000042043.7	ENSMUST00000046644.7	559	4	6	18	6	4	multi-exon	FALSE	canonical	3	1242	junction_3	49.6185449202211	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGTTTTATACTTTAC	NA	False	NA	19	True	AATAAA	-19	NA	94925423	94979412	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_94925511_94968867_94968974_94973615_94973703_94979157
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047275	chr13	+	3037	13	NIC	ENSMUSG00000042015.18	novel	3062	14	NA	NA	23	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	18.8981186600383	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTGGGTTTGTTTTTTT	NA	False	NA	16	True	AATATA	-17	NA	95112878	95159822	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_+_95113098_95114977_95115094_95131757_95131807_95133563_95133694_95136374_95136437_95142238_95142351_95145315_95145379_95146792_95146904_95151538_95151724_95153834_95153957_95154624_95154714_95155339_95155474_95158177
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047291	chr13	-	3262	14	FSM	ENSMUSG00000021681.9	ENSMUST00000022189.9	3249	14	-13	0	-13	0	multi-exon	FALSE	canonical	3	209	junction_4	22.6835706778766	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTTCTTTGTATTTGC	NA	False	NA	27	True	AATAAA	-14	NA	95511873	95487190	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_95488211_95489254_95489355_95490457_95490586_95492900_95492984_95493704_95493871_95495217_95495320_95498976_95499029_95499344_95499457_95501188_95501511_95504887_95505077_95505904_95506067_95507264_95507468_95508048_95508152_95511353
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047298	chr13	-	2753	2	FSM	ENSMUSG00000021678.10	ENSMUST00000022185.10	2741	2	2	-14	2	14	multi-exon	FALSE	canonical	3	40	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTCTTTCAGGCTGTGT	9828	False	NA	NA	False	AATAAA	-30	NA	95661733	95648225	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_95650790_95661544
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047306	chr13	+	188	1	Intergenic	novelGene_1525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACAGAATTCTGCATTAT	NA	False	NA	NA	False	NA	NA	NA	95665199	95665387	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_95665200_95665400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047312	chr13	-	3353	2	FSM	ENSMUSG00000048376.7	ENSMUST00000059193.7	3336	2	6	-23	6	23	multi-exon	FALSE	canonical	3	48	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATTGTTCCTGTGGGCCC	NA	False	NA	NA	False	AATAAA	-26	NA	95754989	95738287	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_95741446_95754794
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047332	chr13	+	4635	13	FSM	ENSMUSG00000021671.10	ENSMUST00000099295.6	5183	13	22	526	22	25	multi-exon	FALSE	canonical	3	109	junction_9	14.0798812337163	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTGTATGTCTGGTTT	NA	False	NA	NA	False	ATTAAA	-41	NA	96524823	96553719	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_96525040_96526730_96526871_96528095_96528184_96529734_96529853_96530999_96531078_96533147_96533339_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541192_96547097_96547275_96550986
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047343	chr13	-	4262	15	FSM	ENSMUSG00000021668.16	ENSMUST00000022172.12	4225	15	-34	-3	-34	3	multi-exon	FALSE	canonical	3	26	junction_7	5.85191404236116	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTGACTGTCATATTTA	NA	False	NA	NA	False	AATAAA	-23	NA	96679027	96617194	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_96618763_96618965_96619000_96619998_96620914_96623315_96623488_96625689_96625787_96627444_96627478_96630336_96630504_96631915_96632041_96633110_96633351_96638026_96638181_96641018_96641151_96644719_96644873_96653146_96653267_96655536_96655696_96678834
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047355	chr13	+	4086	18	FSM	ENSMUSG00000021669.16	ENSMUST00000077672.12	2746	18	12	-1352	1	887	multi-exon	FALSE	canonical	3	25	junction_11	11.3473012507266	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATTTTATTTTGCAAT	NA	False	NA	13	True	AAAAAG	-19	NA	96679254	96775410	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96753501_96753580_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047363	chr13	-	4402	20	FSM	ENSMUSG00000021670.15	ENSMUST00000022176.15	4425	20	28	-5	28	5	multi-exon	FALSE	canonical	3	390	junction_19	35.2932314809179	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAAGCAGTGGCTTTTTT	NA	False	NA	0	True	AGTAAA	-27	NA	96807416	96785469	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047386	chr13	+	190	1	Intergenic	novelGene_1526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGTTAATCACAAA	NA	False	NA	23	True	NA	NA	NA	97150530	97150720	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_97150500_97150700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047408	chr13	+	217	1	Intergenic	novelGene_1527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGTGTACATTTGTTTT	NA	False	NA	NA	False	TTTAAA	-2	NA	97210862	97211079	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_97210900_97211100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047410	chr13	-	193	2	Antisense	novelGene_ENSMUSG00000021666.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	1032	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGGCTTCTATTCTCAT	NA	False	NA	NA	False	NA	NA	NA	97296458	97237175	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr13_-_97237317_97296406
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047427	chr13	-	1100	6	FSM	ENSMUSG00000060739.9	ENSMUST00000073456.9	2700	6	40	1560	-24	0	multi-exon	FALSE	canonical	3	555	junction_1	171.768914533451	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGGGCATAACGGTTTA	NA	False	NA	NA	False	AATAAA	-28	NA	97274405	97267491	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_97267737_97268350_97268544_97270046_97270227_97271801_97271953_97272028_97272217_97274262
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047433	chr13	+	3125	21	NIC	ENSMUSG00000021666.17	novel	3157	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	43.0145033680502	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTAACAAATCTTAATT	NA	False	NA	NA	False	AATAAA	-25	NA	97274484	97312959	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_+_97274535_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047440	chr13	+	3158	21	FSM	ENSMUSG00000021666.17	ENSMUST00000161639.8	3157	21	-1	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	31.6045487232455	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTAACAAATCTTAATT	NA	False	NA	NA	False	AATAAA	-25	NA	97274484	97312959	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_97274568_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047451	chr13	+	187	1	Intergenic	novelGene_1528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGGTTTACATGTCTGCA	NA	False	NA	NA	False	NA	NA	NA	97281041	97281228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_97281000_97281200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047458	chr13	-	227	1	Intergenic	novelGene_1529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTTTCCCCAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	97296458	97296231	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_97296200_97296500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047466	chr13	-	188	1	Intergenic	novelGene_1530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTTAAAAAAAGAAAGAA	NA	False	NA	-1	True	NA	NA	NA	97298431	97298243	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_97298200_97298400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047471	chr13	-	1929	14	FSM	ENSMUSG00000021665.10	ENSMUST00000022169.10	1905	14	-24	0	-24	0	multi-exon	FALSE	canonical	3	2035	junction_5	137.076923076923	632	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTGCCCTGTGTGGAT	NA	False	NA	1	True	AATAAA	-27	NA	97334889	97312838	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047485	chr13	+	210	1	Intergenic	novelGene_1531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATGTTGACTTCTGGCC	NA	False	NA	NA	False	NA	NA	NA	97367748	97367958	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_97367700_97368000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047490	chr13	+	188	1	Intergenic	novelGene_1532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAAAGGCTGCTCTGGTG	NA	False	NA	NA	False	NA	NA	NA	97433094	97433282	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_97433100_97433300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047496	chr13	+	226	1	Intergenic	novelGene_1533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAATAATTTGGAACA	NA	False	NA	NA	False	NA	NA	NA	97526554	97526780	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_97526600_97526800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047502	chr13	+	187	1	Intergenic	novelGene_1534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCCTTCATTGTTCAAAG	NA	False	NA	NA	False	TTTAAA	-1	NA	97553146	97553333	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_97553100_97553300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047523	chr13	+	2715	3	FSM	ENSMUSG00000078952.10	ENSMUST00000179324.2	2764	3	49	0	49	0	multi-exon	FALSE	canonical	3	54	junction_2	70.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCGAACTCAAGACCTC	NA	False	NA	21	True	AATAAA	-18	NA	97619257	97633515	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_97619286_97619456_97619541_97630912
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047527	chr13	+	3205	3	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	71.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCGAACTCAAGACCTC	NA	False	NA	21	True	AATAAA	-18	NA	97619258	97633515	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr13_+_97619286_97629663_97630239_97630912
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047530	chr13	+	2794	4	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_3	70.6745278646337	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCGAACTCAAGACCTC	NA	False	NA	21	True	AATAAA	-18	NA	97619258	97633515	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr13_+_97619286_97619456_97619541_97629663_97629744_97630912
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047549	chr13	-	216	1	Intergenic	novelGene_1535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAATGCTATCTCATATT	NA	False	NA	NA	False	NA	NA	NA	97848894	97848678	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_97848700_97848900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047585	chr13	-	907	6	FSM	ENSMUSG00000021660.15	ENSMUST00000152704.8	888	6	-17	-2	-17	1	multi-exon	FALSE	canonical	3	5972	junction_2	361.40138350593	1759	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTATCATTTTACTTAT	NA	False	NA	-15	True	AATAAA	-38	NA	98453531	98446402	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452737_98452807_98453373
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047608	chr13	+	2454	1	FSM	ENSMUSG00000078302.6	ENSMUST00000105098.6	5064	1	1	2609	1	-2609	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACCTAAGTAATTGGCTG	NA	False	NA	NA	False	AATAAA	-22	NA	98490750	98493204	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_98490800_98493200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047617	chr13	+	177	1	Intergenic	novelGene_1536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAAGGCTTGTGAT	6569	False	NA	NA	False	NA	NA	NA	98698882	98699059	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_98698900_98699100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047628	chr13	-	181	1	Intergenic	novelGene_1537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTCTTCATTAATATTTT	3537	False	NA	NA	False	NA	NA	NA	98887512	98887331	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_98887300_98887500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047633	chr13	+	198	1	Intergenic	novelGene_1538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGCAAGATAGCAAGGT	NA	False	NA	NA	False	NA	NA	NA	98964480	98964678	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_98964500_98964700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047645	chr13	-	4964	1	ISM	ENSMUSG00000009470.18	ENSMUST00000109399.9	8445	24	47058	0	26341	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGCACTCTTGATTTT	4113	False	NA	-7	True	AATAAA	-15	NA	98980490	98975526	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr13_-_98975500_98980500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047654	chr13	-	8412	24	FSM	ENSMUSG00000009470.18	ENSMUST00000109401.8	8453	24	41	0	11	0	multi-exon	FALSE	canonical	3	248	junction_23	63.8650810868555	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGCACTCTTGATTTT	NA	False	NA	-7	True	AATAAA	-15	NA	99062851	98975526	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047655	chr13	-	8422	24	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	11	0	combination_of_known_junctions	TRUE	canonical	3	224	junction_23	67.7519382879703	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGCACTCTTGATTTT	NA	False	NA	-7	True	AATAAA	-15	NA	99027537	98975526	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027434
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047671	chr13	+	219	1	Intergenic	novelGene_1539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAATTGGTGGTGGTGG	NA	False	NA	NA	False	NA	NA	NA	99149880	99150099	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_99149900_99150100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047684	chr13	-	1700	10	FSM	ENSMUSG00000021650.8	ENSMUST00000022153.8	1704	10	4	0	4	0	multi-exon	FALSE	canonical	3	306	junction_5	28.5894740191448	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGGTTGTGTTTCTTTTC	NA	False	NA	-11	True	AATAAA	-16	NA	99481209	99456154	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_99456902_99458068_99458183_99463145_99463221_99466459_99466574_99468943_99469036_99469395_99469475_99473170_99473289_99476408_99476539_99479820_99479914_99481071
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047695	chr13	+	1856	11	FSM	ENSMUSG00000041632.8	ENSMUST00000052249.7	1849	11	-5	-2	-5	2	multi-exon	FALSE	canonical	3	414	junction_10	37.2860563750043	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTGGTGTGATTTTG	NA	False	NA	22	True	AATAAA	-17	NA	99481288	99552072	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_99481384_99484839_99484918_99499472_99499544_99501732_99501792_99536769_99536885_99540011_99540091_99541495_99541612_99546316_99546420_99547785_99547929_99548702_99548874_99551246
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047713	chr13	+	223	1	Intergenic	novelGene_1540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTACTAAAAAAAAGAGTTAC	NA	False	NA	NA	False	NA	NA	NA	99967179	99967402	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_99967200_99967400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047726	chr13	-	2127	17	FSM	ENSMUSG00000021646.10	ENSMUST00000022148.7	2123	17	0	-4	0	1	multi-exon	FALSE	canonical	2	186	junction_5	41.3428878405948	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGGGTTGTTGAGATGGT	669	False	NA	-2	True	AATAAA	-19	NA	100152147	100085036	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_100085465_100088663_100088750_100090643_100090759_100091122_100091280_100095312_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719_100127822_100130074_100130160_100136757_100136825_100151893
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047739	chr13	+	527	3	FSM	ENSMUSG00000021643.16	ENSMUST00000022145.15	601	3	69	5	-4	2	multi-exon	FALSE	canonical	3	69	junction_1	3	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATTGGTGAATATTATT	NA	False	NA	NA	False	AATAAA	-20	NA	100244588	100250741	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_100244738_100245530_100245640_100250472
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047743	chr13	+	1235	9	FSM	ENSMUSG00000021645.17	ENSMUST00000022147.15	1222	9	-4	-9	-4	9	multi-exon	TRUE	canonical	3	544	junction_6	97.8154352594722	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATAGATATTTTCCTTT	NA	False	NA	26	True	AATAAA	-22	NA	100261355	100274207	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_100261474_100263094_100263167_100263377_100263498_100264312_100264514_100264722_100264870_100267587_100267684_100268863_100268975_100272196_100272248_100273888
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047763	chr13	-	1577	16	FSM	ENSMUSG00000021639.18	ENSMUST00000066984.14	1656	16	-35	114	-17	114	multi-exon	FALSE	canonical	3	225	junction_10	29.724213848122	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTTATTTTGAGCCA	NA	False	NA	-10	True	ATTAAA	-16	NA	100629104	100605201	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047794	chr13	-	2740	17	FSM	ENSMUSG00000021635.15	ENSMUST00000177848.3	2392	17	-33	-315	-29	0	multi-exon	FALSE	canonical	3	174	junction_16	17.1335516968899	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTTCTTATCCTTT	NA	False	NA	-6	True	ATTAAA	-15	NA	100787588	100753671	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100787457
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047810	chr13	+	189	1	Antisense	novelGene_ENSMUSG00000021635.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTGTAGGAGCTGGAG	3603	False	NA	NA	False	NA	NA	NA	100774003	100774192	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr13_+_100774000_100774200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047814	chr13	-	185	1	Intergenic	novelGene_1541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCCATGTGGTTTC	2778	False	NA	NA	False	NA	NA	NA	100783828	100783643	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_100783600_100783800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047817	chr13	+	192	1	Intergenic	novelGene_1542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAACGATGAATGAAACAG	NA	False	NA	NA	False	NA	NA	NA	100786497	100786689	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_100786500_100786700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047821	chr13	+	1774	3	FSM	ENSMUSG00000078941.10	ENSMUST00000084721.8	1222	3	-5	-547	-5	547	multi-exon	FALSE	canonical	3	1279	junction_2	251.5	405	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTCTTTCTCATTATACA	NA	False	NA	NA	False	NA	NA	NA	100787845	100793114	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_100787954_100790698_100790792_100791541
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047839	chr13	+	1254	3	FSM	ENSMUSG00000052293.15	ENSMUST00000167256.8	1230	3	-23	-1	0	0	multi-exon	FALSE	canonical	3	171	junction_1	554	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGTACTTTGGCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	100788091	100792568	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_100788226_100790698_100790792_100791541
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047864	chr13	+	209	1	Intergenic	novelGene_1543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATCTTCGGCTGGGCAGT	NA	False	NA	NA	False	AAAAAG	-3	NA	100868423	100868632	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_100868400_100868600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047877	chr13	+	206	1	Intergenic	novelGene_1544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCTAGTAAGATGCTAGG	NA	False	NA	NA	False	NA	NA	NA	100870500	100870706	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_100870500_100870700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047883	chr13	-	1118	4	FSM	ENSMUSG00000061474.12	ENSMUST00000109333.8	701	4	-417	0	-417	0	multi-exon	FALSE	canonical	3	1082	junction_3	81.5693297481079	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTTTTCTGTTTATTT	NA	False	NA	NA	False	AATAAA	-1	NA	100881584	100872462	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_100872782_100875521_100875710_100877675_100877740_100881037
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047888	chr13	-	1031	5	NNC	ENSMUSG00000061474.12	novel	469	5	NA	NA	-417	-4	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_4	463.256408482387	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGTCCCTTTTCTGTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	100881584	100872466	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr13_-_100872782_100875521_100875710_100877675_100877740_100881037_100881156_100881238
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047889	chr13	-	1005	5	NNC	ENSMUSG00000061474.12	novel	469	5	NA	NA	-417	-4	at_least_one_novel_splicesite	FALSE	canonical	3	201	junction_4	428.198843996571	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGTCCCTTTTCTGTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	100881584	100872466	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr13_-_100872782_100875521_100875710_100877675_100877740_100881037_100881130_100881238
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047894	chr13	-	913	4	NNC	ENSMUSG00000061474.12	novel	701	4	NA	NA	-417	-4	at_least_one_novel_splicesite	FALSE	canonical	3	219	junction_3	475.847547948804	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGTCCCTTTTCTGTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	100881584	100872466	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr13_-_100872782_100875521_100875710_100877675_100877740_100881238
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047902	chr13	-	4344	3	ISM	ENSMUSG00000061474.12	ENSMUST00000109333.8	701	4	-417	72	-417	50	intron_retention	FALSE	canonical	3	1166	junction_2	57.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTATTAACTTGCTCTTGA	NA	False	NA	NA	False	ATTAAA	-21	NA	100881584	100872534	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr13_-_100872782_100875521_100875710_100877675
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047932	chr13	-	4021	8	NIC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	-13	4	intron_retention	FALSE	canonical	3	2476	junction_5	479.670550205757	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCCTTTTGACTGTTTA	NA	False	NA	-2	True	AATAAA	-32	NA	100923007	100915235	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100920156_100921964_100922127_100922240_100922412_100922889
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000047980	chr13	+	192	1	Intergenic	novelGene_1545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAACAGTGCCCTGAT	NA	False	NA	NA	False	NA	NA	NA	100948933	100949125	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_100948900_100949100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048004	chr13	-	4204	13	FSM	ENSMUSG00000021710.12	ENSMUST00000109315.5	4162	13	-35	-7	-35	7	multi-exon	TRUE	canonical	3	279	junction_1	22.4276614920058	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACAGTACTTTTGTCTT	NA	False	NA	-6	True	AATAAA	-26	NA	104246157	104159557	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048012	chr13	+	3797	11	FSM	ENSMUSG00000042743.14	ENSMUST00000044385.14	3048	11	10	-759	10	759	multi-exon	FALSE	canonical	3	36	junction_7	16.2775919595006	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTGTCTTTGACTTATA	NA	False	NA	NA	False	AATAAA	-23	NA	104246258	104279002	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_104246478_104247577_104247698_104254831_104254936_104257974_104258045_104260697_104260798_104265736_104265842_104268444_104268584_104268673_104268737_104271111_104271150_104271347_104271432_104276247
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048025	chr13	-	3516	13	FSM	ENSMUSG00000021711.18	ENSMUST00000022224.16	2342	13	-10	-1164	-8	3	multi-exon	TRUE	canonical	3	258	junction_6	196.200152905139	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGGATCTGAGTCAACTA	NA	False	NA	NA	False	AATAAA	-21	NA	104314941	104278660	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104288672_104288691_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048033	chr13	-	3495	12	NIC	ENSMUSG00000021711.18	novel	3502	13	NA	NA	-8	3	combination_of_known_junctions	FALSE	canonical	3	331	junction_5	173.024051258921	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGGATCTGAGTCAACTA	NA	False	NA	NA	False	AATAAA	-21	NA	104314941	104278660	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048036	chr13	-	3498	12	FSM	ENSMUSG00000021711.18	ENSMUST00000144060.8	3538	12	36	4	-8	3	multi-exon	FALSE	canonical	3	331	junction_5	157.730704704606	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGGATCTGAGTCAACTA	NA	False	NA	NA	False	AATAAA	-21	NA	104314941	104278660	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048040	chr13	-	3513	13	FSM	ENSMUSG00000021711.18	ENSMUST00000141557.8	3502	13	-8	-3	-8	3	multi-exon	FALSE	canonical	3	258	junction_6	206.169209766045	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGGATCTGAGTCAACTA	NA	False	NA	NA	False	AATAAA	-21	NA	104314941	104278660	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104288672_104288691_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048059	chr13	-	1585	2	FSM	ENSMUSG00000118537.2	ENSMUST00000133280.2	1609	2	21	3	21	-3	multi-exon	FALSE	canonical	3	68	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGTCTGATTTTGTAT	NA	False	NA	NA	False	ATTAAA	-11	NA	104314926	104310232	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_104311513_104314621
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048100	chr13	-	2370	11	FSM	ENSMUSG00000021713.10	ENSMUST00000022226.6	2342	11	-21	-7	0	7	multi-exon	FALSE	canonical	3	267	junction_6	27.1368752806951	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCAAATGACTGGTTAT	NA	False	NA	-6	True	TATAAA	-18	NA	104365351	104341624	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544_104356993_104359345_104359467_104359599_104359701_104361857_104361961_104365113
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048103	chr13	+	1019	10	NIC	ENSMUSG00000021714.16	novel	1353	10	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	409	junction_5	30.3205101100449	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATAGTTTGTCTTTGTT	NA	False	NA	10	True	AATAAA	-21	NA	104365439	104386125	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_+_104365511_104367236_104367388_104369165_104369223_104370654_104370728_104372686_104372734_104378696_104378780_104378862_104378962_104379253_104379381_104381785_104381840_104385868
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048119	chr13	+	186	1	Intergenic	novelGene_1546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAGAGATGTTAATTTGT	NA	False	NA	NA	False	NA	NA	NA	104486678	104486864	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_104486700_104486900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048131	chr13	-	186	1	Intergenic	novelGene_1547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATTATATGATTCTTAT	NA	False	NA	NA	False	NA	NA	NA	104592762	104592576	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_104592600_104592800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048141	chr13	-	1874	14	FSM	ENSMUSG00000021715.13	ENSMUST00000022228.13	2071	14	12	185	12	-185	multi-exon	FALSE	canonical	3	502	junction_8	84.1316241226496	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTGCAGATTGCATTAG	NA	False	NA	-5	True	AATAAA	-29	NA	104953449	104767832	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048157	chr13	+	2314	5	FSM	ENSMUSG00000021716.15	ENSMUST00000022230.15	2365	5	56	-5	-6	5	multi-exon	FALSE	canonical	3	138	junction_4	17.2536228079786	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGTCATTTTTAAAACA	NA	False	NA	NA	False	AATAAA	-23	NA	104953740	104975787	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_104953875_104963562_104963611_104969361_104969506_104970755_104970829_104973872
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048163	chr13	+	195	1	Intergenic	novelGene_1548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAGTTGCTGCATTTAAA	NA	False	NA	NA	False	NA	NA	NA	105037975	105038170	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_105038000_105038200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048175	chr13	+	210	1	Intergenic	novelGene_1549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAAGGGACTGTGGAAG	NA	False	NA	NA	False	AAAAAG	-10	NA	106985931	106986141	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_106985900_106986100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048178	chr13	+	211	1	Intergenic	novelGene_1550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAGTAGTATAAGCATTA	NA	False	NA	NA	False	NA	NA	NA	107021219	107021430	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_107021200_107021400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048187	chr13	+	190	1	Intergenic	novelGene_1551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCAGGTGCCCGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	107059309	107059499	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_107059300_107059500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048216	chr13	+	199	1	Intergenic	novelGene_1552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGACAAGTGACTGAACT	NA	False	NA	NA	False	NA	NA	NA	107120701	107120900	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_107120700_107120900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048227	chr13	+	210	1	Intergenic	novelGene_1553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAGCCCAGAGACTAATTA	NA	False	NA	NA	False	NA	NA	NA	107766591	107766801	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_107766600_107766800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048230	chr13	+	1936	3	FSM	ENSMUSG00000071180.6	ENSMUST00000095458.6	1918	3	-15	-3	-15	3	multi-exon	FALSE	canonical	3	97	junction_1	47	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGAGTTTTTGTCTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	108180964	108185709	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_108181021_108182958_108183103_108183973
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048260	chr13	+	4021	8	FSM	ENSMUSG00000021696.10	ENSMUST00000022207.10	4013	8	-8	0	-8	0	multi-exon	FALSE	canonical	0	0	junction_3	37.4045724586758	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTGTCATGTCTAACT	NA	False	NA	NA	False	NA	NA	NA	108350929	108422217	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_108351035_108393200_108393333_108403723_108403915_108407166_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048273	chr13	+	2533	11	FSM	ENSMUSG00000021697.13	ENSMUST00000051594.12	2563	11	17	13	17	-13	multi-exon	FALSE	canonical	3	89	junction_3	8.78009111570034	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATATACTATGCCTTG	2864	False	NA	26	True	AATAAA	-33	NA	108452882	108526106	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_108453004_108460439_108460706_108493927_108494064_108498768_108498897_108500066_108500198_108505346_108505395_108510246_108510388_108519289_108519457_108521259_108521437_108523368_108523555_108525074
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048275	chr13	+	876	1	FSM	ENSMUSG00000059751.8	ENSMUST00000074680.8	795	1	-24	-57	-24	57	mono-exon	FALSE	NA	NA	NA	NA	NA	1215	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTTGTAGCATCTTGAT	NA	False	NA	NA	False	AATAAA	-29	NA	108807112	108807988	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_108807100_108808000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048290	chr13	+	2798	14	FSM	ENSMUSG00000021701.9	ENSMUST00000022212.9	2800	14	2	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	11.0769230769231	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGTCTCCTGTCCTTGC	NA	False	NA	6	True	AATAAA	-17	NA	110531581	110537378	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_110531972_110532548_110532657_110532809_110532927_110533124_110533255_110533440_110533529_110534004_110534101_110534221_110534421_110534507_110534656_110534906_110535005_110535212_110535343_110535554_110535796_110535913_110536044_110536296_110536408_110536566
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048301	chr13	+	180	1	Intergenic	novelGene_1554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAATATTTAAATATTTGA	NA	False	NA	NA	False	NA	NA	NA	111533201	111533381	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_111533200_111533400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048312	chr13	-	3539	14	NIC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	158	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_7	408.363554812875	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTGTTCTTTGTAGTG	NA	False	NA	-4	True	AATAAA	-15	NA	111626404	111562213	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111579854_111579941_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048317	chr13	-	3463	13	FSM	ENSMUSG00000032745.19	ENSMUST00000047627.14	3694	13	231	0	148	0	multi-exon	FALSE	canonical	3	874	junction_7	122.771100245765	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTGTTCTTTGTAGTG	NA	False	NA	-4	True	AATAAA	-15	NA	111626414	111562213	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048328	chr13	-	2829	12	NIC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	184	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_10	340.73585901668	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTTC	NA	False	NA	-2	True	AATAAA	-23	NA	111626378	111562691	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111623956_111624905_111626251
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048346	chr13	-	178	1	Intergenic	novelGene_1555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACTCTGTTGTCTTTAC	NA	False	NA	NA	False	NA	NA	NA	111647114	111646936	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_111646900_111647100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048349	chr13	+	178	1	Intergenic	novelGene_1556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTTGGCTGGTAGAAGA	NA	False	NA	NA	False	NA	NA	NA	111681201	111681379	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_111681200_111681400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048357	chr13	+	199	1	Intergenic	novelGene_1557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTTGTTTCATTGTAGC	NA	False	NA	NA	False	NA	NA	NA	111731957	111732156	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_111732000_111732200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048377	chr13	-	6973	20	FSM	ENSMUSG00000021754.18	ENSMUST00000109267.9	6978	20	0	5	0	-5	multi-exon	TRUE	canonical	3	32	junction_8	9.29659038560826	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAACTGGTATTTTGGCTT	NA	False	NA	NA	False	AATAAA	-16	NA	111945527	111882966	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_111885584_111886976_111887109_111887752_111887896_111888898_111889031_111890272_111890436_111891176_111891330_111891644_111892897_111893146_111893337_111893627_111893720_111894599_111894722_111896485_111896765_111899587_111899772_111900032_111900115_111900615_111900738_111904496_111904646_111905010_111905128_111905820_111906022_111909129_111909331_111912401_111912553_111945036
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048383	chr13	+	186	1	Intergenic	novelGene_1558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATTCAGGGTGGGCTAT	NA	False	NA	NA	False	NA	NA	NA	112133958	112134144	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_112134000_112134100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048390	chr13	+	7918	17	FSM	ENSMUSG00000021756.13	ENSMUST00000183663.8	8678	17	21	739	10	-739	multi-exon	FALSE	canonical	3	291	junction_16	42.4389267065038	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTTTTCTGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	112600624	112645881	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048402	chr13	-	181	1	Intergenic	novelGene_1559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTTTTCAAGTTTCCTA	NA	False	NA	NA	False	NA	NA	NA	112661847	112661666	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_112661700_112661800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048414	chr13	+	1898	15	FSM	ENSMUSG00000047789.6	ENSMUST00000052514.6	8910	15	1	7011	1	-7005	multi-exon	TRUE	canonical	3	26	junction_2	7.31122983038101	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATTGCTGTAATTCTAA	NA	False	NA	14	True	CATAAA	-16	NA	112797300	112868272	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_112797407_112806120_112806266_112822599_112822733_112825806_112825929_112826055_112826120_112826692_112826787_112831774_112831946_112834518_112834579_112837990_112838186_112840071_112840180_112850674_112850782_112859731_112859846_112862580_112862730_112865731_112865822_112868032
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048423	chr13	+	1583	6	FSM	ENSMUSG00000021759.15	ENSMUST00000016144.12	1598	6	6	9	6	-9	multi-exon	FALSE	canonical	3	199	junction_2	66.7730484551964	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGGAAGCGTTTGTAGT	9643	False	NA	5	True	AATAAA	-20	NA	112937331	113004419	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_112937801_112971392_112971548_112993279_112993561_112996177_112996236_113003329_113003507_113003976
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048429	chr13	+	1419	5	NIC	ENSMUSG00000021759.15	novel	1598	6	NA	NA	15	-9	combination_of_known_splicesites	FALSE	canonical	3	68	junction_1	115.720298565118	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGGAAGCGTTTGTAGT	9652	False	NA	5	True	AATAAA	-20	NA	112937340	113004419	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_+_112937801_112993279_112993561_112996177_112996236_113003329_113003507_113003976
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048433	chr13	+	1571	6	FSM	ENSMUSG00000021759.15	ENSMUST00000070951.8	1272	6	-56	-243	15	-9	multi-exon	FALSE	canonical	3	38	junction_1	139.137342219837	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGGAAGCGTTTGTAGT	9652	False	NA	5	True	AATAAA	-20	NA	112937340	113004419	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_112937801_112987936_112988089_112993279_112993561_112996177_112996236_113003329_113003507_113003976
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048446	chr13	+	206	1	Intergenic	novelGene_1560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATATCTGAGCAGTAAGGC	NA	False	NA	NA	False	NA	NA	NA	112976555	112976761	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_112976600_112976800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048469	chr13	+	4510	27	FSM	ENSMUSG00000042426.7	ENSMUST00000038574.7	4682	27	174	-2	-20	2	multi-exon	TRUE	canonical	3	222	junction_12	28.2580040501697	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCCATCTCTGTGTCA	NA	False	NA	20	True	AATAAA	-20	NA	113064161	113105968	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_113064508_113066160_113066235_113067375_113067490_113069040_113069171_113069617_113069764_113072002_113072132_113076906_113077034_113078206_113078366_113081027_113081194_113081603_113081728_113083296_113083909_113084745_113084890_113089336_113089514_113090207_113090349_113091681_113091827_113091933_113092052_113092915_113093001_113095446_113095536_113096652_113096782_113096856_113096933_113097594_113097820_113099267_113099405_113099796_113099891_113100980_113101275_113101748_113101881_113103069_113103167_113105668
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048481	chr13	-	187	1	Intergenic	novelGene_1561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATCTGCTACTAGCATGT	NA	False	NA	NA	False	NA	NA	NA	113115051	113114864	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_113114900_113115100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048495	chr13	-	4484	2	FSM	ENSMUSG00000042364.12	ENSMUST00000109241.5	4447	2	-37	0	-37	0	multi-exon	FALSE	canonical	3	496	junction_1	0	324	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCTTGTCTTTTATTTCTA	NA	False	NA	0	True	AATAAA	-21	NA	113755137	113728714	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_113731399_113753337
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048517	chr13	+	4565	2	Intergenic	novelGene_1562	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	131	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	113855139	113860379	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_113859492_113860166
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048529	chr13	+	2559	5	FSM	ENSMUSG00000042348.11	ENSMUST00000091201.7	3364	5	20	785	20	676	multi-exon	FALSE	canonical	3	349	junction_1	23.636571240347	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTCTCCCTGCAAGTT	NA	False	NA	NA	False	AATAAA	-27	NA	113931060	114293212	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_113931233_114058782_114058928_114070599_114070660_114104117_114104327_114291239
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048536	chr13	+	206	1	Intergenic	novelGene_1563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTGATATTTATGAAATAA	NA	False	NA	NA	False	NA	NA	NA	114135899	114136105	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_114135900_114136100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048552	chr13	-	677	5	FSM	ENSMUSG00000021764.9	ENSMUST00000022286.8	1698	5	172	849	-6	4	multi-exon	FALSE	canonical	3	1521	junction_3	83.4187478927849	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGGCAGTTTCTATTTT	NA	False	NA	-14	True	AATAAA	-23	NA	114524622	114425179	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_114425403_114444352_114444427_114453392_114453566_114487983_114488063_114524494
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048559	chr13	-	588	4	FSM	ENSMUSG00000021764.9	ENSMUST00000225035.2	571	4	-17	0	0	0	multi-exon	FALSE	canonical	3	165	junction_3	707.770364517256	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACACTTGGCAGTTTCTA	NA	False	NA	-18	True	AATAAA	-19	NA	114524616	114425183	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_114425403_114444352_114444427_114453392_114453566_114524494
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048574	chr13	+	1187	7	FSM	ENSMUSG00000015536.15	ENSMUST00000166104.9	1193	7	12	-6	4	0	multi-exon	TRUE	canonical	3	133	junction_2	16.9844700306551	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATCCTGTCTCCTTTTTA	NA	False	NA	NA	False	AATAAA	-24	NA	114954783	114965265	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_114954860_114955871_114955994_114957337_114957483_114961102_114961231_114961746_114961898_114962693_114962818_114964824
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048584	chr13	-	1630	2	FSM	ENSMUSG00000042275.10	ENSMUST00000109226.5	1600	2	-30	0	-30	0	multi-exon	FALSE	canonical	3	85	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTAGTTCGAGTTAC	NA	False	NA	-1	True	AATAAA	-22	NA	115226752	115224890	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_-_115225498_115225729
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048596	chr13	+	2273	9	FSM	ENSMUSG00000021728.9	ENSMUST00000022242.9	2923	9	340	310	-104	-310	multi-exon	FALSE	canonical	3	356	junction_8	42.5617198900608	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTGCTGCTGGCTTTTG	NA	False	NA	NA	False	AATAAA	-30	NA	117357147	117410641	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_117357494_117369262_117369353_117385807_117386001_117386236_117386323_117400930_117401059_117403855_117404136_117405465_117405500_117408580_117408636_117409580
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048605	chr13	-	186	1	Intergenic	novelGene_1564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGGAAATCAGGGA	NA	False	NA	NA	False	NA	NA	NA	117359800	117359614	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_117359600_117359800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048609	chr13	+	795	1	FSM	ENSMUSG00000021728.9	ENSMUST00000224455.2	2136	1	1329	12	1329	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATCTTAAAACTGTGCAT	NA	False	NA	NA	False	NA	NA	NA	117365890	117366685	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_117365900_117366700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048620	chr13	-	189	1	Intergenic	novelGene_1565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACAGTTGCTTTCGCTG	NA	False	NA	NA	False	NA	NA	NA	118271790	118271601	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_-_118271600_118271800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048633	chr13	-	3269	3	ISM	ENSMUSG00000021731.11	ENSMUST00000022245.10	3319	5	0	1883	0	-1883	intron_retention	FALSE	canonical	3	1977	junction_1	31	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTTATGTTGACCTGT	NA	False	NA	-7	True	ATTAAA	-23	NA	118523788	118516799	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr13_-_118517206_118519411_118519589_118521102
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048634	chr13	-	2708	4	ISM	ENSMUSG00000021731.11	ENSMUST00000022245.10	3319	5	0	1883	0	-1883	intron_retention	FALSE	canonical	3	1748	junction_3	125.151463790436	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTTATGTTGACCTGT	NA	False	NA	-7	True	ATTAAA	-23	NA	118523788	118516799	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr13_-_118517206_118519411_118519589_118521102_118521209_118521769
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048643	chr13	+	192	1	Intergenic	novelGene_1566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGACCAGACAGCTGACC	NA	False	NA	NA	False	NA	NA	NA	119402065	119402257	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr13_+_119402100_119402300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048646	chr13	-	2276	10	ISM	ENSMUSG00000116207.2	ENSMUST00000223268.2	3339	17	34176	-1	34176	1	3prime_fragment	FALSE	canonical	3	169	junction_9	19.0496427496394	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGCTTCGTCTCTGATGA	NA	False	NA	NA	False	AATAAA	-18	NA	119511312	119472062	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr13_-_119472943_119474911_119475028_119476362_119476482_119491194_119491277_119494038_119494199_119502862_119503043_119505011_119505173_119506447_119506682_119508931_119509128_119511164
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048671	chr13	+	1718	11	FSM	ENSMUSG00000025451.16	ENSMUST00000026520.14	2551	11	6	827	6	0	multi-exon	FALSE	canonical	3	177	junction_1	70.3985795311241	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCTAGCTGGTTAGATG	NA	False	NA	109	True	AATAAA	-36	NA	119565463	119593927	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_119565697_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048674	chr13	+	2566	13	FSM	ENSMUSG00000062822.9	ENSMUST00000026519.10	2565	13	-1	0	-1	0	multi-exon	TRUE	canonical	3	76	junction_1	23.5189049253763	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTCATTTCTTACA	NA	False	NA	9	True	AATAAA	-19	NA	119599302	119622653	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_119599656_119602546_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048698	chr13	+	3304	10	FSM	ENSMUSG00000093930.3	ENSMUST00000179869.3	3245	10	-54	-5	13	5	multi-exon	FALSE	canonical	3	428	junction_1	79.8526420630178	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTGAGTGTTTTTTTT	NA	False	NA	20	True	AATAAA	-20	NA	120151927	120169623	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr13_+_120152050_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048705	chr13	+	3455	11	NIC	ENSMUSG00000093930.3	novel	3464	11	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	216.614611695518	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGCTCTTTGAGTGTTT	NA	False	NA	15	True	AATAAA	-15	NA	120151929	120169618	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_+_120152050_120156425_120156584_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048721	chr13	-	3237	8	NIC	ENSMUSG00000094870.9	novel	2966	8	NA	NA	-228	1	combination_of_known_junctions	FALSE	canonical	3	13	junction_7	54.2684182972914	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTGTATGGGTGTTT	NA	False	NA	77	True	AGTAAA	-19	NA	120252653	120226721	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252355
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048750	chr14	+	1112	3	ISM	ENSMUSG00000058317.13	ENSMUST00000175643.8	757	6	257864	-478	-33192	12	3prime_fragment	FALSE	canonical	3	197	junction_2	14	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGCTTTGTGTCCTAG	NA	False	NA	21	True	AATAAA	-33	NA	3839262	3896133	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr14_+_3839398_3882697_3882846_3895304
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048757	chr14	+	177	1	Intergenic	novelGene_1567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAAATCTCTTCGTT	NA	False	NA	NA	False	NA	NA	NA	3994114	3994291	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_3994100_3994300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048773	chr14	+	1904	4	FSM	ENSMUSG00000012405.17	ENSMUST00000080281.14	1922	4	18	0	18	0	multi-exon	FALSE	canonical	3	8735	junction_1	3197.35060462391	1184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGTTATCTTTTATGTT	NA	False	NA	NA	False	AATAAA	-18	NA	4198646	4201873	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_4198738_4199235_4199418_4199652_4199790_4200379
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048813	chr14	-	5689	36	FSM	ENSMUSG00000017485.12	ENSMUST00000017629.12	10335	36	-21	4667	-21	1967	multi-exon	TRUE	canonical	3	144	junction_31	34.1687767724051	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTTACTGAAGGTGAAAC	3822	False	NA	7	True	ATTAAA	-21	NA	6104605	6038967	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_6039465_6040330_6040426_6041163_6041290_6044297_6044409_6045984_6046065_6046939_6047142_6048898_6049061_6049277_6049423_6051231_6051427_6052727_6052812_6053050_6053207_6055769_6055862_6056006_6056203_6056643_6056845_6057572_6057708_6059737_6059970_6060445_6060595_6060814_6060937_6062357_6062473_6062558_6062652_6062923_6063034_6069266_6069373_6069635_6069747_6070728_6070855_6070998_6071157_6071841_6071981_6074033_6074172_6074254_6074357_6076430_6076605_6079783_6079997_6081275_6081374_6082344_6082491_6083608_6083673_6085215_6085307_6086545_6086702_6104036
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048851	chr14	+	1382	8	FSM	ENSMUSG00000021737.5	ENSMUST00000022256.5	1387	8	5	0	5	0	multi-exon	FALSE	canonical	3	1151	junction_1	36.7689975886408	338	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTCTTAAACATACA	NA	False	NA	25	True	AATAAA	-27	NA	8348783	8357589	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_8349025_8349570_8349777_8352792_8352939_8353159_8353380_8353506_8353616_8355471_8355641_8357159_8357238_8357376
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048861	chr14	+	180	1	Intergenic	novelGene_1568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAAGAAATCTT	NA	False	NA	NA	False	NA	NA	NA	8462648	8462828	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_8462600_8462800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048871	chr14	-	197	1	Intergenic	novelGene_1569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGGTAAGATGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	8470502	8470305	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_8470300_8470500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048879	chr14	+	1000	8	FSM	ENSMUSG00000053453.10	ENSMUST00000065865.10	937	8	-63	0	-63	0	multi-exon	TRUE	canonical	3	370	junction_1	118.776758531907	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGTGCTCATTCAAAAC	NA	False	NA	22	True	AATAAA	-16	NA	8508422	8520751	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_8508579_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048899	chr14	-	4831	28	Antisense	novelGene_ENSMUSG00000114246.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_16	18.893318289663	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTGGACAGTGTGTGT	NA	False	NA	1	True	AATAAA	-31	NA	10517058	10231198	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr14_-_10232037_10232598_10232735_10243308_10243452_10244146_10244294_10249042_10249172_10249677_10249755_10250730_10250825_10253754_10253902_10254439_10254576_10255956_10256130_10258043_10258179_10259088_10259224_10259412_10259496_10262382_10262480_10269949_10270042_10278989_10279082_10290412_10290500_10302885_10303019_10315336_10316106_10317697_10317748_10324278_10324388_10327194_10327380_10347592_10347786_10359629_10359788_10378281_10378349_10432326_10432423_10507040_10507190_10516877
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048900	chr14	-	4744	27	Antisense	novelGene_ENSMUSG00000114246.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	50	junction_26	12.5460099977605	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTGGACAGTGTGTGT	NA	False	NA	1	True	AATAAA	-31	NA	10517058	10231198	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr14_-_10232037_10232598_10232735_10243308_10243452_10244146_10244294_10249042_10249172_10249677_10249755_10250730_10250825_10253754_10253902_10254439_10254576_10255956_10256130_10258043_10258179_10259088_10259224_10259412_10259496_10262382_10262480_10269949_10270042_10278989_10279082_10302885_10303019_10315336_10316106_10317697_10317748_10324278_10324388_10327194_10327380_10347592_10347786_10359629_10359788_10378281_10378349_10432326_10432423_10507040_10507190_10516877
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048912	chr14	+	1224	1	FSM	ENSMUSG00000045799.7	ENSMUST00000052615.7	336	1	-183	-705	-183	705	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTTACAGTGTTTGTG	NA	False	NA	NA	False	AATAAA	-45	NA	13669254	13670478	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_13669300_13670500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048927	chr14	-	2514	3	FSM	ENSMUSG00000021752.15	ENSMUST00000022272.14	1650	3	2	-866	2	866	multi-exon	FALSE	canonical	3	225	junction_1	7.5	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTAATTAGTCATGTGC	NA	False	NA	NA	False	AATAAA	-17	NA	14255631	14245343	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_14247587_14249552_14249623_14255430
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048944	chr14	+	202	1	Intergenic	novelGene_1570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCATATTTGATATATCT	NA	False	NA	NA	False	AAAAAG	-4	NA	14295697	14295899	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_14295700_14295900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048952	chr14	+	1489	10	FSM	ENSMUSG00000021748.10	ENSMUST00000022268.10	1513	10	28	-4	-16	4	multi-exon	FALSE	canonical	3	2290	junction_6	170.664134819183	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTGGAGTACTATTAAGA	NA	False	NA	NA	False	AATAAA	-20	NA	14296775	14303781	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048963	chr14	+	2469	8	NIC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	-10	0	intron_retention	FALSE	canonical	3	2317	junction_5	168.496714677595	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCTTGGAGTACTATT	NA	False	NA	NA	False	AATAAA	-16	NA	14296825	14303777	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14300065_14300336_14300429_14302918_14303061_14303291
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000048967	chr14	-	2825	18	FSM	ENSMUSG00000033885.16	ENSMUST00000225653.2	2765	18	-54	-6	-10	0	multi-exon	TRUE	canonical	3	52	junction_2	21.2781870861862	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTAGCTTTGCTAGGTA	NA	False	NA	0	True	AATAAA	-17	NA	14371572	14304655	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_14305839_14314427_14314491_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14349901_14349953_14371356
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049004	chr14	-	9045	46	FSM	ENSMUSG00000025278.10	ENSMUST00000052678.9	9100	46	55	0	55	0	multi-exon	TRUE	canonical	3	76	junction_16	125.273027256567	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGTCATTCTTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	14651761	14518184	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547026_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049010	chr14	-	9072	46	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	255	junction_40	115.220754303303	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGTCATTCTTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	14651821	14518184	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547059_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049025	chr14	+	943	5	FSM	ENSMUSG00000094021.8	ENSMUST00000169215.8	984	5	55	-14	55	14	multi-exon	FALSE	canonical	0	0	junction_3	8	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGTGTATGCTTCAGCT	NA	False	NA	NA	False	AATAAA	-17	NA	15424857	15433252	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_15424996_15425726_15425890_15426844_15426977_15427652_15427837_15432926
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049032	chr14	-	2095	8	NNC	ENSMUSG00000094132.8	novel	882	7	NA	NA	-5	1057	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	10.6961751699056	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGTGTATGCTTCAGCT	NA	False	NA	NA	False	AATAAA	-17	NA	17614202	17592864	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr14_-_17593998_17596548_17596732_17597407_17597540_17598489_17598653_17599386_17599522_17609286_17609438_17612629_17612744_17614118
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049039	chr14	-	187	1	Intergenic	novelGene_1571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGCGCCACCATAAGT	NA	False	NA	NA	False	NA	NA	NA	18447085	18446898	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_18446900_18447100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049065	chr14	-	1043	8	FSM	ENSMUSG00000021807.7	ENSMUST00000022341.7	1562	8	-29	548	-29	-548	multi-exon	FALSE	canonical	3	1848	junction_5	420.22365279378	573	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGAGTCCATGTATTC	1659	False	NA	-6	True	AATAAA	-34	NA	19873921	19861966	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_19862306_19862416_19862466_19864604_19864674_19866252_19866342_19867128_19867216_19869974_19870075_19872633_19872759_19873736
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049083	chr14	+	197	1	Intergenic	novelGene_1572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTGACCGGTCTTTCCG	NA	False	NA	NA	False	NA	NA	NA	20022971	20023168	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_20023000_20023200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049100	chr14	-	3412	5	FSM	ENSMUSG00000023243.10	ENSMUST00000024011.10	3392	5	-20	0	-20	0	multi-exon	FALSE	canonical	3	94	junction_3	12.5573683548744	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGGTATGTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	20231897	20190124	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_20192526_20194702_20194872_20195023_20195191_20196568_20196681_20231334
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049106	chr14	-	2797	14	FSM	ENSMUSG00000021810.4	ENSMUST00000022344.4	3132	14	24	311	24	-311	multi-exon	FALSE	canonical	3	477	junction_8	30.9081479462529	341	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGGTCTGACTGAGGCA	NA	False	NA	88	True	ATTAAA	-15	NA	20398165	20370230	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_20371020_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379058_20380021_20380108_20383396_20383526_20386136_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20393323_20393442_20396678_20396890_20397861
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049146	chr14	-	1401	5	FSM	ENSMUSG00000021811.8	ENSMUST00000022345.7	1631	5	12	218	12	-218	multi-exon	TRUE	canonical	3	896	junction_2	62.1711347813437	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGGATTATTTAAATGAC	NA	False	NA	-12	True	AATAAA	-19	NA	20438966	20434923	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_20435547_20435867_20435955_20438024_20438280_20438367_20438509_20438671
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049173	chr14	-	2812	13	FSM	ENSMUSG00000021814.18	ENSMUST00000065504.17	2851	13	23	16	11	1	multi-exon	FALSE	canonical	3	603	junction_12	120.241741458151	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTTTTGACCTAGAGTAA	8001	False	NA	0	True	AATAAA	-25	NA	20530178	20505343	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529962
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049183	chr14	-	1828	13	FSM	ENSMUSG00000021814.18	ENSMUST00000224975.2	2727	13	8	891	5	361	multi-exon	FALSE	canonical	3	93	junction_12	241.43268845696	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGTTTAATGTTAAAAGA	8208	False	NA	-18	True	AATAAA	-19	NA	20529971	20506235	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529847
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049211	chr14	-	2454	12	ISM	ENSMUSG00000021816.12	ENSMUST00000161445.8	3298	14	-28	7803	-2	0	5prime_fragment	FALSE	canonical	3	105	junction_2	32.0745515869534	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTAATCTGGCTCGTT	NA	False	NA	-7	True	AATAAA	-19	NA	20596643	20557738	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr14_-_20558790_20559483_20559566_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049224	chr14	-	6463	21	FSM	ENSMUSG00000034235.18	ENSMUST00000022356.12	6580	21	117	0	117	0	multi-exon	TRUE	canonical	3	44	junction_20	12.721929885045	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGTCTTTTACTTTTG	NA	False	NA	2	True	AATAAA	-23	NA	20691014	20598979	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20614935_20615132_20616010_20616131_20620315_20620484_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641682_20654119_20654213_20657149_20657974_20690984
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049239	chr14	+	4456	23	FSM	ENSMUSG00000039367.12	ENSMUST00000048657.10	4461	23	5	0	5	0	multi-exon	FALSE	canonical	3	291	junction_9	29.806850674089	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCTCATTACTCGCGAC	NA	False	NA	15	True	AATAAA	-18	NA	20724380	20744920	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049257	chr14	+	4499	24	NIC	ENSMUSG00000039367.12	novel	4196	24	NA	NA	1	0	intron_retention	FALSE	canonical	3	56	junction_6	85.7457665656559	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTCATTACTCGCG	NA	False	NA	13	True	AATAAA	-16	NA	20724404	20744918	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20735279_20735349_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049265	chr14	+	4164	3	FSM	ENSMUSG00000039357.3	ENSMUST00000048016.3	4163	3	-1	0	-1	0	multi-exon	FALSE	canonical	3	28	junction_1	5	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCTTTATTACATT	NA	False	NA	NA	False	AATAAA	-23	NA	20745034	20751084	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_20745767_20745855_20746482_20748278
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049274	chr14	+	574	3	FSM	ENSMUSG00000063787.5	ENSMUST00000071215.5	616	3	42	0	-10	0	multi-exon	FALSE	canonical	3	1953	junction_1	51.5	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCCATTTCTTCTAATT	NA	False	NA	33	True	AATAAA	-16	NA	20753115	20754493	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_20753266_20753357_20753477_20754188
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049284	chr14	+	6057	26	FSM	ENSMUSG00000021819.12	ENSMUST00000022358.9	6073	26	16	0	16	0	multi-exon	TRUE	canonical	3	22	junction_9	13.1390106172421	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGGGTCTTTGCCTTC	NA	False	NA	17	True	TATAAA	-25	NA	20757635	20773687	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_20758125_20760704_20760859_20761095_20761191_20761525_20761699_20761858_20761967_20762104_20762187_20762309_20762431_20763043_20763246_20763397_20763574_20763950_20764936_20766019_20766152_20766289_20766470_20766566_20766751_20766977_20767077_20767935_20768061_20768494_20768736_20768827_20768987_20769064_20769294_20769447_20769741_20769880_20770105_20771238_20771728_20771937_20772098_20772210_20772388_20772527_20772648_20772895_20773075_20773206
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049292	chr14	-	3689	15	FSM	ENSMUSG00000039308.7	ENSMUST00000223679.2	3907	15	218	0	218	0	multi-exon	FALSE	canonical	3	47	junction_10	9.23281636117516	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTGCTTCATTGC	9641	False	NA	-1	True	AATAAA	-15	NA	20784412	20773797	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_20774429_20774528_20774632_20774778_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20778330_20778518_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049308	chr14	-	229	1	Intergenic	novelGene_1573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCGTTTCTTTGCATAT	NA	False	NA	NA	False	NA	NA	NA	20941541	20941312	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_20941300_20941500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049310	chr14	+	194	1	Intergenic	novelGene_1574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGGGGAAAGCACGGGC	1936	False	NA	NA	False	NA	NA	NA	20969201	20969395	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_20969200_20969400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049321	chr14	+	5284	21	FSM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	-17	0	-17	0	multi-exon	TRUE	canonical	3	265	junction_11	15.7968351260624	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTAATTGAGGTTATTT	NA	False	NA	NA	False	AATAAA	-19	NA	20979448	21083744	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_20979757_21017605_21017677_21032641_21032793_21033435_21033545_21035694_21035818_21037025_21037187_21045079_21045171_21045912_21046061_21051198_21051353_21053162_21053339_21057181_21057373_21058928_21059129_21060105_21060235_21064978_21065129_21069347_21069457_21070546_21070850_21072070_21072196_21074173_21074360_21079243_21079448_21079849_21079955_21081654
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049361	chr14	-	177	1	Intergenic	novelGene_1575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGGAACAATATAGCTTC	NA	False	NA	NA	False	NA	NA	NA	21449465	21449288	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_21449300_21449500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049374	chr14	-	185	1	Intergenic	novelGene_1576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAACAGAACACGGTA	NA	False	NA	NA	False	NA	NA	NA	21485748	21485563	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_21485600_21485700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049378	chr14	-	151	1	Intergenic	novelGene_1577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	21528367	21528216	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_21528200_21528400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049407	chr14	+	1975	10	FSM	ENSMUSG00000021771.15	ENSMUST00000022293.14	1954	10	-21	0	-21	0	multi-exon	FALSE	canonical	3	2055	junction_4	139.679350612946	460	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTGCAGTTTCTAAGTT	NA	False	NA	12	True	AATAAA	-22	NA	21881315	21895947	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049421	chr14	-	923	7	FSM	ENSMUSG00000021773.12	ENSMUST00000124549.9	2314	7	67	1324	-16	0	multi-exon	FALSE	canonical	3	244	junction_3	15.9661099415815	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGAGCATCCTCTTCC	NA	False	NA	-10	True	AATAAA	-17	NA	21898978	21897246	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_21897496_21897681_21897816_21897940_21897996_21898069_21898189_21898277_21898384_21898608_21898737_21898846
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049429	chr14	-	180	1	Intergenic	novelGene_1578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGGGGGAACCTGTGGG	NA	False	NA	NA	False	NA	NA	NA	22021651	22021471	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_22021500_22021700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049431	chr14	-	2494	6	ISM	ENSMUSG00000021782.15	ENSMUST00000042009.13	6336	27	33207	0	1606	0	3prime_fragment	TRUE	canonical	3	145	junction_4	6.05309838016862	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTGTAGACCCTGG	NA	False	NA	-4	True	AATAAA	-16	NA	24194650	24184020	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049449	chr14	+	235	1	Intergenic	novelGene_1579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAAAGGAGAACACAGG	NA	False	NA	NA	False	NA	NA	NA	24390102	24390337	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_24390100_24390300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049467	chr14	+	161	1	Intergenic	novelGene_1580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAGAAGAGACGGATGGA	NA	False	NA	NA	False	AAAACA	-7	NA	24537290	24537451	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_24537300_24537500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049476	chr14	+	582	6	FSM	ENSMUSG00000025290.18	ENSMUST00000169826.3	519	6	-47	-16	-10	3	multi-exon	FALSE	canonical	3	4464	junction_5	3607.86166031903	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCTGCTGCTTATTGG	NA	False	NA	20	True	AATAAA	-19	NA	24540738	24545929	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24545497_24545518_24545842
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049488	chr14	+	2831	4	FSM	ENSMUSG00000025290.18	ENSMUST00000223939.2	2769	4	-48	-14	0	1	multi-exon	FALSE	canonical	3	9630	junction_1	1522.07774659071	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCTCTGCTGCTTATT	NA	False	NA	18	True	AATAAA	-17	NA	24540748	24545927	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049508	chr14	+	764	6	FSM	ENSMUSG00000025290.18	ENSMUST00000224568.2	714	6	-14	-36	-14	1	multi-exon	FALSE	canonical	3	776	junction_1	4812.24305288085	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCTCTGCTGCTTATT	NA	False	NA	18	True	AATAAA	-17	NA	24540820	24545927	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_24541093_24541817_24541884_24541974_24542185_24543450_24543562_24545497_24545518_24545842
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049511	chr14	+	744	5	NIC	ENSMUSG00000025290.18	novel	714	6	NA	NA	-14	1	combination_of_known_junctions	FALSE	canonical	3	776	junction_1	5312.66281515212	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCTCTGCTGCTTATT	NA	False	NA	18	True	AATAAA	-17	NA	24540820	24545927	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_+_24541093_24541817_24541884_24541974_24542185_24543450_24543562_24545842
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049522	chr14	+	246	1	Intergenic	novelGene_1581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGTTCTAATTCCCAGC	3210	False	NA	NA	False	NA	NA	NA	25591722	25591968	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_25591700_25592000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049543	chr14	-	4580	4	FSM	ENSMUSG00000055538.8	ENSMUST00000069180.8	4556	4	-22	-2	-22	2	multi-exon	FALSE	canonical	3	42	junction_3	4.78423336480244	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCGTGAGTTTGTATATG	NA	False	NA	1	True	ATTAAA	-20	NA	25769485	25712063	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_25715827_25720050_25720216_25757434_25757636_25769034
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049562	chr14	+	2414	15	FSM	ENSMUSG00000021866.16	ENSMUST00000022416.15	2394	15	-20	0	-20	0	multi-exon	TRUE	canonical	3	387	junction_6	25.4603533329122	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTGCCAGCATGTTT	316	False	NA	26	True	AATAAA	-34	NA	25842559	25887228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_25842720_25869287_25869351_25870492_25870606_25872935_25873323_25874367_25874456_25874633_25874729_25875094_25875209_25877084_25877176_25877532_25877613_25877774_25877832_25879507_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049573	chr14	+	205	1	Intergenic	novelGene_1582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	238	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAAGATTCTAGTTGCT	6478	False	NA	NA	False	NA	NA	NA	25849082	25849287	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_25849100_25849300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049588	chr14	+	186	1	Intergenic	novelGene_1583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCGAGGAGGAGCCAAGCA	NA	False	NA	NA	False	NA	NA	NA	25915180	25915366	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_25915200_25915400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049608	chr14	-	5388	22	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_11	32.5658586159231	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAGTTGTACATCATT	NA	False	NA	1	True	AATAAA	-23	NA	26256100	26134322	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049634	chr14	-	154	1	Intergenic	novelGene_1584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATTCATTTAATTTTAC	NA	False	NA	NA	False	NA	NA	NA	26281246	26281092	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_26281100_26281200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049646	chr14	+	201	1	Intergenic	novelGene_1585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGTCAATTTCAAAATCC	NA	False	NA	NA	False	NA	NA	NA	26323842	26324043	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_26323800_26324000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049656	chr14	+	1810	6	FSM	ENSMUSG00000021877.13	ENSMUST00000022429.9	2165	6	-57	412	-57	32	multi-exon	FALSE	canonical	3	1593	junction_4	101.482215190643	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTTCTTTTGAGACT	1629	False	NA	10	True	AATAAA	-20	NA	26359171	26378001	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_26359642_26367813_26367895_26368068_26368179_26374260_26374333_26374991_26375118_26377050
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049663	chr14	-	174	1	Intergenic	novelGene_1586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATAACCTTGTTAT	NA	False	NA	NA	False	NA	NA	NA	26380393	26380219	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_26380200_26380400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049675	chr14	-	6982	22	FSM	ENSMUSG00000040760.12	ENSMUST00000036570.5	7642	22	662	-2	-65	2	multi-exon	FALSE	canonical	3	262	junction_6	31.5683759207952	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTATGAAATATTTAG	NA	False	NA	-10	True	AATAAA	-22	NA	26692527	26640942	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049687	chr14	+	3634	1	Intergenic	novelGene_1587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGGAAGGAAGGAAGGAA	1117	False	NA	NA	False	NA	NA	NA	26657610	26661244	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_26657600_26661200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049694	chr14	+	193	1	Intergenic	novelGene_1588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATGGCGTCTTGCTTAC	2538	False	NA	NA	False	NA	NA	NA	26675718	26675911	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_26675700_26675900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049705	chr14	+	830	4	FSM	ENSMUSG00000040726.11	ENSMUST00000035433.10	1141	4	311	0	311	0	multi-exon	FALSE	canonical	3	134	junction_1	19.2584757675391	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGTATTTTAATATACTTT	NA	False	NA	NA	False	AATAAA	-18	NA	26722629	26724286	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_26722834_26723328_26723529_26723775_26723878_26723962
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049719	chr14	+	174	1	Intergenic	novelGene_1589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAGCCCAAAAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	26735095	26735269	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_26735100_26735300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049737	chr14	+	196	1	Intergenic	novelGene_1590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGTAAGTCTCTCGGGG	NA	False	NA	NA	False	NA	NA	NA	27013210	27013406	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_27013200_27013400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049744	chr14	+	195	1	Intergenic	novelGene_1591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCTACAGTATTTTGCT	9399	False	NA	NA	False	NA	NA	NA	27076793	27076988	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_27076800_27077000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049760	chr14	+	7497	23	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	33	0	intron_retention	FALSE	canonical	3	154	junction_16	44.9305478737062	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	8961	False	NA	16	True	AATAAA	-20	NA	27150823	27205512	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049763	chr14	+	7557	24	FSM	ENSMUSG00000040651.10	ENSMUST00000022450.6	7590	24	33	0	33	0	multi-exon	FALSE	canonical	3	108	junction_17	57.5794347345285	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	8961	False	NA	16	True	AATAAA	-20	NA	27150823	27205512	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049778	chr14	-	2964	18	FSM	ENSMUSG00000046753.11	ENSMUST00000223689.2	4262	18	-13	1311	-13	6	multi-exon	FALSE	canonical	3	74	junction_15	12.2471661858887	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGTCATGTTAGGGTA	7513	False	NA	NA	False	AATAAA	-26	NA	27230430	27204357	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607_27228673_27230378
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049792	chr14	-	6881	1	Intergenic	novelGene_1592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGGTTTCTGTACAAGAC	NA	False	NA	NA	False	NA	NA	NA	27412328	27405447	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_27405400_27412300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049830	chr14	+	190	1	Intergenic	novelGene_1593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACTGTCATGCATTCA	NA	False	NA	NA	False	NA	NA	NA	29765206	29765396	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_29765200_29765400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049832	chr14	+	5596	10	FSM	ENSMUSG00000021962.10	ENSMUST00000022535.9	5576	10	-20	0	-20	0	multi-exon	FALSE	canonical	3	125	junction_5	16.6332999331662	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAATTGTGTTTTTTATT	NA	False	NA	NA	False	AATAAA	-34	NA	30201548	30249020	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30234940_30235055_30240875_30241635_30243546_30243613_30244684_30244904_30245182
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049838	chr14	+	5418	9	NIC	ENSMUSG00000021962.10	novel	5576	10	NA	NA	-21	0	intron_retention	FALSE	canonical	3	24	junction_5	46.725093632865	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAATTGTGTTTTTTATT	NA	False	NA	NA	False	AATAAA	-34	NA	30201612	30249020	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30240875_30241635_30243546_30243613_30244684_30244904_30245182
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049858	chr14	+	204	1	Intergenic	novelGene_1594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	354	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTGTGGTTTAAAACAGAA	NA	False	NA	NA	False	NA	NA	NA	30259575	30259779	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_30259600_30259800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049868	chr14	+	2139	14	FSM	ENSMUSG00000021957.8	ENSMUST00000022529.8	3223	14	-6	1090	-6	6	multi-exon	FALSE	canonical	3	1855	junction_3	147.090520774709	584	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTTTTTTTTTTCCTGT	NA	False	NA	44	True	AATATA	-27	NA	30271081	30295587	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_30271338_30280677_30280796_30281708_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049876	chr14	-	187	1	Intergenic	novelGene_1595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTAGTCTTTTTTTGGGG	NA	False	NA	NA	False	NA	NA	NA	30310094	30309907	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_30309900_30310100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049882	chr14	-	2784	18	FSM	ENSMUSG00000021948.18	ENSMUST00000112210.11	2777	18	-6	-1	-6	1	multi-exon	TRUE	canonical	3	76	junction_17	15.936508975905	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTGTGGGGACATTTAT	5415	False	NA	-2	True	AATAAA	-18	NA	30348173	30317309	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30329408_30329564_30329626_30331058_30331259_30332144_30332268_30347936
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049903	chr14	+	3466	21	FSM	ENSMUSG00000006527.17	ENSMUST00000054230.12	7837	21	-3	4374	-3	1	multi-exon	TRUE	canonical	3	68	junction_1	13.3913218167588	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGGCTCTAGGGTTTT	NA	False	NA	28	True	ATTAAA	-20	NA	30437568	30540304	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_30437833_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049914	chr14	+	3742	8	FSM	ENSMUSG00000006526.14	ENSMUST00000006701.8	3742	8	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_2	11.5387545750335	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATGGTGGTTGCTTTTTT	NA	False	NA	NA	False	AATAAA	-32	NA	30547546	30599167	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_30547848_30584836_30584886_30586385_30586482_30588579_30588702_30592707_30592821_30593437_30593516_30594506_30594657_30596334
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049925	chr14	+	189	1	Intergenic	novelGene_1596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTTTGTTTTTTTG	9746	False	NA	NA	False	NA	NA	NA	30606396	30606585	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_30606400_30606600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049944	chr14	+	191	1	Intergenic	novelGene_1597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATTCAGACCACACCAG	2877	False	NA	NA	False	NA	NA	NA	30719757	30719948	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_30719800_30719900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049956	chr14	+	1499	10	FSM	ENSMUSG00000021916.17	ENSMUST00000168584.9	1498	10	0	-1	0	0	multi-exon	TRUE	canonical	3	45	junction_1	28.2055944017416	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTGCTTCCCCATTTT	3526	False	NA	9	True	AATAAA	-20	NA	30723356	30733948	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_30723386_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049982	chr14	-	1859	15	FSM	ENSMUSG00000042354.8	ENSMUST00000037739.8	1947	15	88	0	-20	0	multi-exon	FALSE	canonical	3	775	junction_10	82.9678140200482	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAAGATTTATTTAT	NA	False	NA	-1	True	AATAAA	-20	NA	30741021	30734389	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738412_30738783_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000049983	chr14	-	1770	15	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	7	0	combination_of_known_junctions	TRUE	canonical	3	108	junction_10	218.114789100808	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAAGATTTATTTAT	NA	False	NA	-1	True	AATAAA	-20	NA	30740994	30734389	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738350_30738783_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050006	chr14	+	7877	31	FSM	ENSMUSG00000042323.18	ENSMUST00000112095.8	7907	31	30	0	-2	0	multi-exon	FALSE	canonical	3	94	junction_27	38.4939244845498	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8245	False	NA	14	True	AATAAA	-21	NA	30741124	30843549	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050022	chr14	+	1857	14	FSM	ENSMUSG00000071547.5	ENSMUST00000227096.2	1848	14	-8	-1	-8	1	multi-exon	FALSE	canonical	3	528	junction_7	36.4029064448587	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCTTCATTCCAGCTC	NA	False	NA	21	True	AATAAA	-23	NA	30853001	30861082	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_30853334_30856695_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857642_30857772_30857874_30857936_30858021_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050034	chr14	+	309	1	ISM	ENSMUSG00000071547.5	ENSMUST00000227096.2	1848	14	7763	0	793	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGCTTCATTCCAGCT	NA	False	NA	20	True	AATAAA	-22	NA	30860772	30861081	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr14_+_30860800_30861100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050042	chr14	-	5568	21	FSM	ENSMUSG00000021910.16	ENSMUST00000022469.13	5559	21	-7	-2	-7	2	multi-exon	FALSE	canonical	3	883	junction_8	71.9902076674321	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCTTCAAGGTTATAGA	9314	False	NA	-2	True	AATAAA	-19	NA	30928765	30892884	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050050	chr14	-	5464	21	NIC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_5	223.150061617737	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGTCTTCAAGGTTATA	9422	False	NA	-4	True	AATAAA	-17	NA	30928657	30892886	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896850_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050067	chr14	-	2650	14	FSM	ENSMUSG00000021910.16	ENSMUST00000172142.8	2780	14	126	4	0	-4	multi-exon	TRUE	canonical	3	57	junction_1	267.283529621824	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGCACATCTTTTTC	9422	False	NA	-1	True	AATAAA	-16	NA	30928657	30905273	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_30906355_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050085	chr14	+	3420	17	FSM	ENSMUSG00000021901.11	ENSMUST00000022458.11	3460	17	26	14	26	0	multi-exon	TRUE	canonical	3	305	junction_12	31.9899886683318	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGGTTGCTATCTCGA	NA	False	NA	11	True	AATAAA	-18	NA	30973432	30981887	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979245_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050094	chr14	+	3651	21	FSM	ENSMUSG00000021893.15	ENSMUST00000022451.14	3648	21	0	-3	0	1	multi-exon	TRUE	canonical	3	214	junction_6	22.7354348979737	245	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGTTTAATGTCCAGAAT	NA	False	NA	18	True	AATAAA	-23	NA	31058594	31093944	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_31058941_31061991_31062101_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050112	chr14	-	1974	6	FSM	ENSMUSG00000021891.9	ENSMUST00000055303.5	3946	6	0	1972	0	793	multi-exon	FALSE	canonical	3	247	junction_5	24.3359815910516	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTGAATGTGTTTGTTT	NA	False	NA	2	True	NA	NA	NA	31216997	31200748	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_31201768_31204747_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050113	chr14	-	1822	5	FSM	ENSMUSG00000021891.9	ENSMUST00000228181.2	793	5	-38	-991	0	793	multi-exon	FALSE	canonical	3	35	junction_1	108.841628065736	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTGAATGTGTTTGTTT	NA	False	NA	2	True	NA	NA	NA	31216987	31200748	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_31201768_31209527_31209699_31214278_31214414_31215553_31215922_31216858
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050137	chr14	+	4040	6	FSM	ENSMUSG00000021890.7	ENSMUST00000022446.7	4918	6	705	173	-92	-173	multi-exon	FALSE	canonical	3	223	junction_4	16.2357629940819	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGTCTTGTTTTATTTT	6307	False	NA	NA	False	AATAAA	-21	NA	31217060	31231642	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_31217329_31219665_31219761_31222076_31222214_31224219_31224411_31226243_31226478_31228527
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050154	chr14	-	6764	28	FSM	ENSMUSG00000014496.9	ENSMUST00000014640.9	6712	28	-52	0	-52	0	multi-exon	FALSE	canonical	3	136	junction_10	15.4869740389594	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTCTTTCTTTTTTA	5228	False	NA	NA	False	AATAAA	-19	NA	31552660	31420724	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31552283
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050164	chr14	-	166	1	Intergenic	novelGene_1598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATGTGTTTAAAAAT	NA	False	NA	NA	False	NA	NA	NA	31800912	31800746	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_31800700_31800900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050169	chr14	-	2969	3	FSM	ENSMUSG00000021905.15	ENSMUST00000067955.12	2953	3	-12	-4	-12	1	multi-exon	FALSE	canonical	3	570	junction_1	6	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTTTCTTGAAGCTTT	NA	False	NA	-2	True	AATAAA	-17	NA	31807578	31802521	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_31805204_31806863_31806939_31807366
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050192	chr14	+	226	1	Intergenic	novelGene_1599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAACACAGTGAAGTACA	NA	False	NA	NA	False	AAAAAG	-31	NA	31809744	31809970	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_31809700_31810000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050207	chr14	+	3398	10	NIC	ENSMUSG00000056234.16	novel	4065	10	NA	NA	-11	6	combination_of_known_junctions	TRUE	canonical	3	55	junction_6	182.100365759865	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTTTGTGTTATCTGT	NA	False	NA	4	True	ATTAAA	-19	NA	31881883	31901210	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_+_31881968_31892704_31892860_31894259_31894401_31894563_31894653_31894845_31894955_31895357_31895448_31896349_31896491_31897895_31898913_31899189_31899331_31899779
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050211	chr14	+	185	1	Intergenic	novelGene_1600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAACAAGCTCTATCTCT	NA	False	NA	NA	False	NA	NA	NA	31886910	31887095	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_31886900_31887100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050218	chr14	-	1174	7	FSM	ENSMUSG00000013701.14	ENSMUST00000013845.13	1173	7	-1	0	-1	0	multi-exon	FALSE	canonical	3	3717	junction_4	299.373048590253	541	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTATCTCCATTTAATA	NA	False	NA	NA	False	AATAAA	-40	NA	31923856	31902118	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_31902628_31911100_31911212_31913298_31913358_31915359_31915445_31915810_31915905_31920925_31920985_31923599
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050232	chr14	+	4102	18	FSM	ENSMUSG00000021911.17	ENSMUST00000022470.15	4413	18	-13	324	-13	6	multi-exon	FALSE	canonical	1	134	junction_15	83.8243756407233	395	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCACTTATATTTTATTCA	NA	False	NA	21	True	AATAAA	-34	NA	31923892	32019183	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_31924423_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050272	chr14	-	3897	1	Genic_Genomic	ENSMUSG00000115691.2	novel	NA	NA	NA	NA	12588	2161	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGTCTTATTTCTTATT	NA	False	NA	0	True	ATTAAA	-23	NA	32027354	32023457	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr14_-_32023500_32027400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050324	chr14	+	552	1	FSM	ENSMUSG00000078126.5	ENSMUST00000104925.5	468	1	-14	-70	-14	70	mono-exon	FALSE	NA	NA	NA	NA	NA	1691	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGTTACTTCATGATTA	2260	False	NA	NA	False	AATATA	-38	NA	33892597	33893149	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_33892600_33893100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050343	chr14	+	192	1	Intergenic	novelGene_1601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCTCTGAGAAATTAATA	NA	False	NA	NA	False	NA	NA	NA	33977300	33977492	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_33977300_33977500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050349	chr14	+	215	1	Intergenic	novelGene_1602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGGGAAGAAGGGA	NA	False	NA	NA	False	NA	NA	NA	34027339	34027554	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_34027300_34027600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050357	chr14	+	3517	13	FSM	ENSMUSG00000021794.17	ENSMUST00000022322.17	3390	13	-125	-2	-125	2	multi-exon	FALSE	canonical	3	1379	junction_7	93.7817723938577	552	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTCTCTATGGGGACGC	NA	False	NA	15	True	AATAAA	-24	NA	34032558	34067224	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050367	chr14	+	204	1	Intergenic	novelGene_1603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTGTGTTCGAGTAGC	NA	False	NA	NA	False	NA	NA	NA	34068776	34068980	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_34068800_34069000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050384	chr14	+	3916	7	FSM	ENSMUSG00000041445.10	ENSMUST00000111908.3	3974	7	58	0	58	0	multi-exon	FALSE	canonical	3	26	junction_3	15.3260852434302	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTGTTTACTGTTG	4948	False	NA	6	True	AATAAA	-16	NA	34097479	34126244	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_34097736_34118121_34118251_34118328_34118436_34118515_34118597_34119503_34119678_34119786_34121581_34124869
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050390	chr14	-	419	1	ISM	ENSMUSG00000021796.16	ENSMUST00000049005.15	5956	13	91208	327	49077	-327	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGTGTTTTGTGATGCT	NA	False	NA	0	True	AGTAAA	-24	NA	34133436	34133017	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr14_-_34133000_34133400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050392	chr14	-	5625	13	FSM	ENSMUSG00000021796.16	ENSMUST00000049005.15	5956	13	4	327	4	-327	multi-exon	FALSE	canonical	3	65	junction_12	20.5622361516338	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGTGTTTTGTGATGCT	NA	False	NA	0	True	AGTAAA	-24	NA	34224640	34133017	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182570_34224351
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050404	chr14	+	179	1	Intergenic	novelGene_1604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAACATGTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34206363	34206542	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_34206400_34206500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050409	chr14	+	195	1	Intergenic	novelGene_1605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGTTACAGCTACAGAAT	NA	False	NA	NA	False	NA	NA	NA	34217036	34217231	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_34217000_34217200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050414	chr14	+	201	1	Intergenic	novelGene_1606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAACCAGGAGCTTGTGTG	4596	False	NA	NA	False	NA	NA	NA	34263396	34263597	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_34263400_34263600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050421	chr14	+	6390	19	FSM	ENSMUSG00000041408.19	ENSMUST00000090027.11	4185	19	-300	-1905	-55	2	multi-exon	FALSE	canonical	3	148	junction_3	211.44655367664	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTGTCTTTAACATAAGTC	NA	False	NA	16	True	AATAAA	-21	NA	34395829	34469942	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_34396318_34398910_34399432_34413638_34414692_34416961_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050422	chr14	+	6408	19	FSM	ENSMUSG00000041408.19	ENSMUST00000048263.14	6351	19	-55	-2	-55	2	multi-exon	FALSE	canonical	3	756	junction_1	98.1423286185256	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTGTCTTTAACATAAGTC	NA	False	NA	16	True	AATAAA	-21	NA	34395829	34469942	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050438	chr14	+	228	1	Intergenic	novelGene_1607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTACATTAAAGTACTACA	NA	False	NA	NA	False	AATAAA	-41	NA	34408213	34408441	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_34408200_34408400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050443	chr14	+	196	1	Intergenic	novelGene_1608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATTTTATACTACTGTT	NA	False	NA	NA	False	NA	NA	NA	34413344	34413540	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_34413300_34413500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050448	chr14	+	191	1	Intergenic	novelGene_1609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCATCCAGATTTCTACA	NA	False	NA	NA	False	NA	NA	NA	34439787	34439978	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_34439800_34440000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050459	chr14	+	1255	3	Intergenic	novelGene_1610	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	29.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCAGTTTTTTTTTTTT	NA	False	NA	16	True	AATAAA	-16	NA	34496542	34500225	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_34496610_34498763_34498875_34499148
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050465	chr14	+	195	1	Intergenic	novelGene_1611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTCCAAGGCATGGAAAG	NA	False	NA	NA	False	NA	NA	NA	35786695	35786890	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_35786700_35786900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050468	chr14	+	186	1	Intergenic	novelGene_1612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGGTAACATGCCAGGTT	NA	False	NA	NA	False	NA	NA	NA	35837650	35837836	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_35837600_35837800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050481	chr14	-	177	1	Intergenic	novelGene_1613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTCAAAAATAAATTTTGAG	NA	False	NA	NA	False	NA	NA	NA	36651412	36651235	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_36651200_36651400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050485	chr14	-	4258	17	FSM	ENSMUSG00000021803.11	ENSMUST00000022337.11	4332	17	74	0	74	0	multi-exon	TRUE	canonical	2	4	junction_16	5.32351798625683	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTGACCTCCCGGTCCT	NA	False	NA	NA	False	AATAAA	-18	NA	36820230	36799813	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_36801899_36802418_36802677_36803289_36803519_36804100_36804169_36804720_36804886_36806880_36807034_36807468_36807673_36809333_36809435_36810894_36810974_36811323_36811468_36812539_36812657_36813899_36813987_36815958_36816049_36817011_36817063_36818153_36818300_36819218_36819315_36820045
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050492	chr14	-	173	1	Intergenic	novelGene_1614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTACGACCTTAGCCAGCT	NA	False	NA	NA	False	NA	NA	NA	36819796	36819623	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_36819600_36819800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050499	chr14	-	3048	9	FSM	ENSMUSG00000041028.17	ENSMUST00000165649.4	3188	9	-78	218	-58	-218	multi-exon	FALSE	canonical	3	4955	junction_4	366.305861780835	2616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGGTACACACATGTC	NA	False	NA	NA	False	AATAAA	-19	NA	36857287	36842266	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050512	chr14	-	2498	9	NNC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-23	7	at_least_one_novel_splicesite	FALSE	canonical	1	23	junction_8	1786.95934131138	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTGTACTTTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	36857252	36842773	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855753_36857151
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050520	chr14	+	193	1	Intergenic	novelGene_1615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCCCTGTTATGGACTG	NA	False	NA	NA	False	NA	NA	NA	37450171	37450364	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_37450200_37450400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050528	chr14	-	184	1	Intergenic	novelGene_1616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGTAATTATATCTTT	NA	False	NA	NA	False	NA	NA	NA	38384837	38384653	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_38384700_38384800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050534	chr14	-	2647	9	FSM	ENSMUSG00000037824.7	ENSMUST00000047652.6	2475	9	-154	-18	-154	18	multi-exon	TRUE	canonical	3	610	junction_1	26.6868413267663	280	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTCAGGTGTGAC	NA	False	NA	67	True	ATTAAA	-36	NA	40688918	40628383	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40656144_40656243_40688732
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050570	chr14	-	217	1	Intergenic	novelGene_1617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGTGGCTGCTCTTCCA	NA	False	NA	NA	False	TTTAAA	-5	NA	40851605	40851388	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_40851400_40851600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050580	chr14	+	182	1	Intergenic	novelGene_1618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATTTGATAGTTTTATC	NA	False	NA	NA	False	NA	NA	NA	40888395	40888577	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_40888400_40888600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050583	chr14	+	1609	7	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4479	0	intron_retention	TRUE	canonical	3	21	junction_4	63.2262252198845	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTCACTCTTAAGAAACT	NA	False	NA	NA	False	AATAAA	-15	NA	41761472	41825778	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr14_+_41761595_41761988_41762060_41766111_41766287_41818127_41818291_41819245_41819378_41820058_41820240_41825013
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050588	chr14	+	1886	7	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4479	7	intron_retention	FALSE	canonical	3	21	junction_4	63.0672040146241	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTAAGAAACTTCTTTAT	NA	False	NA	NA	False	AATAAA	-22	NA	41761472	41825785	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr14_+_41761595_41761988_41762060_41765841_41766287_41818127_41818291_41819245_41819378_41820058_41820240_41825013
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050602	chr14	+	1433	4	FSM	ENSMUSG00000115483.2	ENSMUST00000228505.2	1591	4	-185	343	-3	-336	multi-exon	FALSE	canonical	3	45	junction_2	11.5854314646552	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTCACTCTTAAGAAACT	NA	False	NA	NA	False	AATAAA	-15	NA	43132489	43163125	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_43132821_43157302_43157435_43158114_43158297_43162337
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050605	chr14	+	1732	8	NNC	ENSMUSG00000090788.3	novel	1387	5	NA	NA	-73732	7	at_least_one_novel_splicesite	TRUE	canonical	2	10	junction_5	49.2250143810678	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAAGAAACTTCTTTATT	NA	False	NA	NA	False	AATAAA	-22	NA	43169938	43251488	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr14_+_43170061_43170454_43170526_43173424_43173568_43243668_43243801_43244528_43244692_43245648_43245781_43246462_43246644_43250700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050621	chr14	-	178	1	Intergenic	novelGene_1619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGATGTACATG	NA	False	NA	NA	False	NA	NA	NA	44671718	44671540	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_44671500_44671700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050630	chr14	+	198	1	Intergenic	novelGene_1620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTTAACAAAAACTCTGA	NA	False	NA	NA	False	NA	NA	NA	45454678	45454876	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_45454700_45454900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050647	chr14	-	2189	1	ISM	ENSMUSG00000021831.10	ENSMUST00000022378.9	4418	16	33295	2	13788	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTGGTCTTTGGTCAG	7532	False	NA	87	True	AATAAA	-18	NA	45522734	45520545	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr14_-_45520500_45522700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050661	chr14	+	2225	14	FSM	ENSMUSG00000021832.9	ENSMUST00000022380.9	2234	14	2	7	2	-7	multi-exon	FALSE	canonical	3	1632	junction_5	93.5359944006622	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACTAACCATAAATGATCC	NA	False	NA	NA	False	AATAAA	-32	NA	45567246	45587155	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050672	chr14	+	1463	15	NIC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	1	-878	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	607.179074550028	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTATGTAATTCAGTAATT	NA	False	NA	26	True	AATAAA	-19	NA	45567293	45586284	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_+_45567390_45567822_45567979_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050686	chr14	+	1618	8	ISM	ENSMUSG00000053205.10	ENSMUST00000226303.2	1730	12	7514	149	7494	-149	3prime_fragment	FALSE	canonical	3	78	junction_3	71.6200291219472	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTATCTTTAAATCATGAC	NA	False	NA	NA	False	TTTAAA	-11	NA	45596192	45611609	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr14_+_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050707	chr14	-	3243	15	FSM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	54	-4	54	4	multi-exon	FALSE	canonical	3	310	junction_11	31.8875575504085	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTACTTCTGATCT	NA	False	NA	-1	True	AATAAA	-24	NA	45767521	45696247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_45697481_45699223_45699366_45699572_45699698_45702180_45702403_45702540_45702648_45704794_45704920_45705959_45706010_45706696_45706832_45710228_45710337_45713029_45713133_45713344_45713571_45719888_45720024_45741953_45742188_45766881_45767049_45767390
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050714	chr14	-	3350	14	ISM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	285	0	-47	0	3prime_fragment	FALSE	canonical	3	310	junction_11	30.5207272668822	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTTTTGTACTTCTG	NA	False	NA	-5	True	AATAAA	-20	NA	45767290	45696251	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr14_-_45697481_45699223_45699366_45699572_45699698_45702180_45702403_45702540_45702648_45704794_45704920_45705959_45706010_45706696_45706832_45710228_45710337_45713029_45713133_45713344_45713571_45719888_45720024_45741953_45742188_45766881
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050723	chr14	+	211	1	Genic_Genomic	ENSMUSG00000115324.2	novel	NA	NA	NA	NA	1014	20	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGGCACGAGGAGGGGG	NA	False	NA	NA	False	NA	NA	NA	45782153	45782364	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr14_+_45782200_45782400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050739	chr14	-	172	1	Intergenic	novelGene_1621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCAGACACTTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	45985882	45985710	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_45985700_45985900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050758	chr14	+	192	1	Intergenic	novelGene_1622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATACACCAGATTAGAAAT	NA	False	NA	NA	False	NA	NA	NA	46748107	46748299	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_46748100_46748300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050786	chr14	+	182	1	Intergenic	novelGene_1623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTAAAAAATCTGTTT	NA	False	NA	NA	False	NA	NA	NA	47028747	47028929	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_47028700_47028900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050805	chr14	-	2774	6	FSM	ENSMUSG00000037580.11	ENSMUST00000089959.7	2775	6	0	1	0	-1	multi-exon	FALSE	canonical	3	47	junction_1	5.3665631459995	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGTGGATGTTGTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	47426870	47391352	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_47393382_47394865_47394951_47396319_47396352_47403932_47403989_47406668_47406779_47426408
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050812	chr14	-	4289	25	FSM	ENSMUSG00000037572.18	ENSMUST00000187531.8	4260	25	-27	-2	-2	2	multi-exon	FALSE	canonical	1	98	junction_11	68.6814304516795	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTTGCTATGGTTTTA	NA	False	NA	2	True	AATAAA	-22	NA	47514316	47478398	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050837	chr14	+	190	1	Intergenic	novelGene_1624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATGAGCATACAGGGTC	NA	False	NA	NA	False	NA	NA	NA	47564679	47564869	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_47564700_47564900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050842	chr14	+	952	6	FSM	ENSMUSG00000050335.18	ENSMUST00000142734.8	1419	6	104	363	1	3	multi-exon	TRUE	canonical	3	33	junction_1	23.7941169199447	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCATCGCTTTGGGGGTT	NA	False	NA	4	True	AATAAA	-17	NA	47611373	47623254	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_47611410_47616979_47617002_47617509_47617876_47619052_47619142_47622058_47622225_47622981
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050853	chr14	-	2786	19	FSM	ENSMUSG00000037544.15	ENSMUST00000043296.10	2964	19	180	-2	-20	2	multi-exon	FALSE	canonical	3	355	junction_12	54.7968470301389	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTTCGCATTGTTAAT	NA	False	NA	NA	False	NA	NA	NA	47655684	47625233	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_47625581_47626868_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050864	chr14	-	2763	19	NIC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	-9	3	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	120.677715884546	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACATTCTTTTCTTCGCA	NA	False	NA	NA	False	NA	NA	NA	47655673	47625241	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_-_47625577_47626868_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050868	chr14	-	2731	19	NIC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	-9	3	combination_of_known_junctions	FALSE	canonical	3	64	junction_10	111.61232785134	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACATTCTTTTCTTCGCA	NA	False	NA	NA	False	NA	NA	NA	47655673	47625241	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_-_47625581_47626868_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643323_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050879	chr14	+	193	1	Intergenic	novelGene_1625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATCTGATGCCCTCTTTA	1963	False	NA	NA	False	NA	NA	NA	47676764	47676957	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_47676800_47677000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050904	chr14	-	4023	13	NNC	ENSMUSG00000037526.8	novel	3729	11	NA	NA	-6169	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	53.9554214143491	56	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTGTGTGTGTCTGTC	NA	False	NA	-4	True	AATAAA	-14	NA	47814275	47778349	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805642_47806089_47812373_47812595_47813988_47814069_47814201
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050925	chr14	+	191	1	Intergenic	novelGene_1626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATTTAAAGAGTTGAAAA	NA	False	NA	NA	False	NA	NA	NA	47812745	47812936	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_47812700_47812900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050961	chr14	+	4347	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	3	405	junction_36	132.185085310088	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886768	47974021	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000050993	chr14	+	4173	38	NIC	ENSMUSG00000021843.18	novel	4298	40	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	256	junction_23	141.712210556787	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886786	47974021	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051033	chr14	+	210	1	Intergenic	novelGene_1627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACAGGTTTGTGATGTA	NA	False	NA	NA	False	NA	NA	NA	47935613	47935823	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_47935600_47935800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051041	chr14	+	5702	6	FSM	ENSMUSG00000021846.10	ENSMUST00000073150.6	5900	6	-25	223	-25	-223	multi-exon	FALSE	canonical	3	56	junction_4	6.58483105326173	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGTTGTCTTTAGACTC	NA	False	NA	6	True	ATTAAA	-17	NA	48358254	48498122	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_48358691_48405653_48405784_48477666_48477769_48487966_48488162_48490033_48490223_48493472
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051051	chr14	-	2109	3	FSM	ENSMUSG00000021848.17	ENSMUST00000122009.8	1737	3	122	-494	122	0	multi-exon	FALSE	canonical	3	33	junction_2	5.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGGTCTAGTTTAATTT	NA	False	NA	-1	True	ATTAAA	-16	NA	48900207	48895133	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_48896784_48898755_48898908_48899900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051062	chr14	+	195	1	Intergenic	novelGene_1628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	743	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAGTACTCAGCCGCTCA	NA	False	NA	NA	False	NA	NA	NA	49226722	49226917	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_49226700_49226900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051070	chr14	-	4392	18	FSM	ENSMUSG00000061244.15	ENSMUST00000162175.9	12699	18	254	8053	-3	1612	multi-exon	FALSE	canonical	3	137	junction_14	16.0953043938104	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTTTTTTATTTTTTA	NA	False	NA	-4	True	AATAAA	-14	NA	49303856	49249599	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_49251807_49252873_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051090	chr14	+	4460	5	FSM	ENSMUSG00000036282.16	ENSMUST00000153488.9	4446	5	-10	-4	-10	4	multi-exon	FALSE	canonical	3	239	junction_1	37.2458051329274	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGTGTGCATTCTATAA	NA	False	NA	41	True	AATAAA	-38	NA	49409672	49428346	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_49409835_49410072_49410851_49415508_49415633_49418162_49418219_49425006
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051096	chr14	+	219	1	Intergenic	novelGene_1629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTAAGCAGGGAGT	NA	False	NA	NA	False	NA	NA	NA	49473862	49474081	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_49473900_49474100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051101	chr14	-	190	1	Intergenic	novelGene_1630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAGATTAGTAGTCA	NA	False	NA	NA	False	NA	NA	NA	49612097	49611907	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_49611900_49612100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051109	chr14	+	6774	1	Intergenic	novelGene_1631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTAGCTCCGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	49839815	49846589	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_49839800_49846600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051116	chr14	-	2752	8	FSM	ENSMUSG00000036242.16	ENSMUST00000036972.14	8831	8	12	6067	0	-351	multi-exon	FALSE	canonical	3	15	junction_3	7.71693076346829	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTTTTCTTGGTTTGGA	NA	False	NA	0	True	AATAAA	-19	NA	50020828	49919475	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_49919874_49920068_49920204_49926723_49926756_49988875_49989140_50005865_50006058_50007835_50008085_50010318_50011697_50020724
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051125	chr14	+	205	1	Intergenic	novelGene_1632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGACATGATTTCAAAT	NA	False	NA	NA	False	NA	NA	NA	50221864	50222069	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_50221900_50222100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051130	chr14	-	1868	10	FSM	ENSMUSG00000006288.9	ENSMUST00000006451.8	1842	10	-19	-7	-19	7	multi-exon	FALSE	canonical	3	788	junction_6	38.5313724991294	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTCTCTTTATTGTCT	NA	False	NA	1	True	ATTAAA	-28	NA	51022995	51002864	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_51003480_51004599_51004745_51009572_51009788_51009930_51010078_51010733_51010791_51012747_51012840_51014718_51014870_51015213_51015426_51018931_51019065_51022894
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051155	chr14	+	188	1	Intergenic	novelGene_1633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGGCTGCCAGTTGATA	2495	False	NA	NA	False	NA	NA	NA	51011516	51011704	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_51011500_51011700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051159	chr14	-	3149	3	FSM	ENSMUSG00000006288.9	ENSMUST00000227934.2	2058	3	-23	-1068	3	418	multi-exon	FALSE	canonical	3	834	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAACAAAACCCCAAAACC	NA	False	NA	NA	False	NA	NA	NA	51022973	51012488	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_51015426_51018931_51019065_51022894
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051168	chr14	-	1548	5	NNC	ENSMUSG00000071470.5	novel	1509	4	NA	NA	30	-1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	80.7971998277168	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTCTTTTCTTTTTGG	8906	False	NA	0	True	AATAAA	-19	NA	51033155	51026705	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr14_-_51027470_51027592_51027663_51029429_51029764_51031014_51031332_51033092
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051169	chr14	-	1483	4	FSM	ENSMUSG00000071470.5	ENSMUST00000095932.5	1509	4	25	1	25	-1	multi-exon	FALSE	canonical	3	174	junction_1	17.4419672692682	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTCTTTTCTTTTTGG	8901	False	NA	0	True	AATAAA	-19	NA	51033160	51026705	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_51027470_51029429_51029764_51031014_51031332_51033092
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051188	chr14	-	1199	2	NNC	ENSMUSG00000071470.5	novel	444	3	NA	NA	5090	-4309	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTATGAGTTGTTCTT	1962	False	NA	0	True	AATAAA	-16	NA	51040099	51035570	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr14_-_51036607_51039936
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051192	chr14	-	327	1	FSM	ENSMUSG00000092837.3	ENSMUST00000175096.3	319	1	-1	-7	-1	7	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATCGAGATCCTTTTGGA	5443	False	NA	NA	False	NA	NA	NA	51045225	51044898	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_51044900_51045200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051196	chr14	+	1841	16	FSM	ENSMUSG00000036023.7	ENSMUST00000036126.7	1894	16	54	-1	-30	1	multi-exon	FALSE	canonical	3	692	junction_5	52.2695577431708	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTTCTTTGGGTTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	51045351	51058759	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052424_51052808_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051209	chr14	+	2402	14	NIC	ENSMUSG00000036023.7	novel	2173	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	749	junction_2	38.1001483169705	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGCTTCTTTGGGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	51045381	51058757	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052885_51053653_51053757_51054429_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051210	chr14	+	1877	16	NIC	ENSMUSG00000036023.7	novel	1894	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	196.861327391192	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGCTTCTTTGGGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	51045381	51058757	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_+_51045445_51047462_51047672_51047956_51048028_51049232_51049284_51052326_51052424_51052808_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051211	chr14	+	2194	15	FSM	ENSMUSG00000036023.7	ENSMUST00000228672.2	2173	15	-21	0	0	0	multi-exon	FALSE	canonical	3	708	junction_7	45.539397610134	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGCTTCTTTGGGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	51045381	51058757	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051221	chr14	+	1798	16	NIC	ENSMUSG00000036023.7	novel	1894	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_5	194.893064696173	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTCTTTGGGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	51045382	51058758	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052413_51052808_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051235	chr14	+	186	1	ISM	ENSMUSG00000097431.3	ENSMUST00000181482.2	2513	2	6972	1470	6964	209	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAACATGAAATAACACAAA	344	False	NA	NA	False	NA	NA	NA	51114804	51114990	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr14_+_51114800_51115000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051245	chr14	-	185	1	Intergenic	novelGene_1634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	570	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATTAATTAATTAATTGT	4427	False	NA	NA	False	NA	NA	NA	51142357	51142172	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_51142200_51142400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051256	chr14	-	1303	11	FSM	ENSMUSG00000006289.15	ENSMUST00000159292.8	3388	11	-3	2088	-3	0	multi-exon	TRUE	canonical	3	62	junction_9	170.895289578151	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGTTGTGTTTTTCAGTT	NA	False	NA	-1	True	AATAAA	-24	NA	51162353	51153138	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070_51154162_51154256_51154323_51154688_51154768_51154910_51154961_51155292_51155389_51157072_51157249_51157386_51157507_51162120
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051264	chr14	+	1260	5	FSM	ENSMUSG00000035960.15	ENSMUST00000049411.12	1239	5	-14	-7	-14	7	multi-exon	FALSE	canonical	3	716	junction_1	194.901898400195	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGTCCCTTTGTGAA	165	False	NA	21	True	AATAAA	-22	NA	51162410	51164603	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_51162487_51162669_51162782_51162973_51163162_51163617_51163811_51163912
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051296	chr14	-	1666	7	FSM	ENSMUSG00000035953.15	ENSMUST00000160835.9	2755	7	-53	1142	-46	5	multi-exon	FALSE	canonical	3	698	junction_6	55.5447767321305	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACTTAACAACTTTTGTG	NA	False	NA	-4	True	AATAAA	-23	NA	51168359	51164666	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168069
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051307	chr14	-	1496	6	FSM	ENSMUSG00000035953.15	ENSMUST00000162957.8	1465	6	-31	0	-5	0	multi-exon	FALSE	canonical	3	65	junction_3	295.870647412007	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCCCACTTAACAACTT	NA	False	NA	-9	True	AATAAA	-18	NA	51168300	51164671	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51167040_51167148_51167590_51167782_51168069
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051342	chr14	+	156	1	Intergenic	novelGene_1635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTCTCCCTTTTCAATTT	NA	False	NA	NA	False	NA	NA	NA	51238707	51238863	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_51238700_51238900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051347	chr14	+	178	1	Intergenic	novelGene_1636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCAGTGGTGTCTCAT	NA	False	NA	NA	False	NA	NA	NA	51384851	51385029	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_51384900_51385000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051370	chr14	-	2019	15	FSM	ENSMUSG00000004558.16	ENSMUST00000111632.5	2103	15	86	-2	-22	2	multi-exon	TRUE	canonical	3	127	junction_6	11.1385064766607	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCATTGTTAATCCGGGTC	NA	False	NA	-9	True	AATAAA	-18	NA	52150859	52142737	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148922_52149004_52150779
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051376	chr14	-	173	1	Intergenic	novelGene_1637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTATCTGTCGCTTAAGG	5706	False	NA	NA	False	NA	NA	NA	52232093	52231920	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_52231900_52232100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051390	chr14	-	2838	4	FSM	ENSMUSG00000049295.18	ENSMUST00000228580.2	2812	4	-19	-7	-1	2	multi-exon	FALSE	canonical	3	96	junction_3	140.753527684231	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGCCTGTGTTTC	4707	False	NA	0	True	AATAAA	-27	NA	52258177	52243531	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_52244605_52244820_52244953_52245684_52247120_52257979
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051406	chr14	-	2838	5	FSM	ENSMUSG00000049295.18	ENSMUST00000226522.2	2804	5	-37	3	-37	2	multi-exon	FALSE	canonical	3	80	junction_4	128.961961446002	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGTGTGTCTGCCTGT	5728	False	NA	-5	True	AATAAA	-22	NA	52252076	52243536	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52251962
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051436	chr14	+	204	1	Intergenic	novelGene_1638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGCCACAGAAATGGGG	NA	False	NA	NA	False	NA	NA	NA	52295001	52295205	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_52295000_52295200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051440	chr14	+	178	1	Intergenic	novelGene_1639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAACAAACCCAAACCAAC	NA	False	NA	NA	False	NA	NA	NA	52298104	52298282	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_52298100_52298300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051451	chr14	-	2820	9	FSM	ENSMUSG00000060373.16	ENSMUST00000227242.2	2617	9	-35	-168	-12	0	multi-exon	FALSE	canonical	3	1744	junction_2	852.637149891441	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTTGGTATATACATCA	8713	False	NA	-31	True	AATAAA	-22	NA	52341497	52310833	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051466	chr14	-	2613	9	FSM	ENSMUSG00000060373.16	ENSMUST00000227458.2	1683	9	-15	-915	10	7	multi-exon	FALSE	canonical	3	633	junction_2	1099.6436638748	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTGGTGTGTACAAAAT	8735	False	NA	-31	True	AATAAA	-26	NA	52341475	52310994	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_52312618_52312711_52312870_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051471	chr14	-	2593	8	NIC	ENSMUSG00000060373.16	novel	1691	9	NA	NA	7	7	combination_of_known_junctions	FALSE	canonical	3	1620	junction_2	930.149406475834	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTGGTGTGTACAAAAT	8732	False	NA	-31	True	AATAAA	-26	NA	52341478	52310994	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051523	chr14	-	2667	9	FSM	ENSMUSG00000060373.16	ENSMUST00000111610.12	2847	9	9	171	9	-3	multi-exon	FALSE	canonical	3	714	junction_5	1135.23408929612	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTGTTAGAAGCTGGTG	8734	False	NA	-41	True	AATAAA	-16	NA	52341476	52311004	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52335471_52335498_52341345
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051543	chr14	-	1359	8	NIC	ENSMUSG00000060373.16	novel	2498	9	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	714	junction_5	1238.64623270566	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCTCCAAAATAATCTCT	8748	False	NA	46	True	AATAAA	-22	NA	52341462	52312251	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52341345
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051566	chr14	-	1352	8	NIC	ENSMUSG00000060373.16	novel	1301	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	633	junction_2	1401.10168023857	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	8748	False	NA	42	True	AATAAA	-18	NA	52341462	52312255	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_-_52312618_52312711_52312870_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52341345
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051580	chr14	+	195	1	Intergenic	novelGene_1640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACAACAACATGAAAGGCT	NA	False	NA	NA	False	NA	NA	NA	52316593	52316788	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_52316600_52316800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051587	chr14	+	189	1	Intergenic	novelGene_1641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTGCTTTGGGGGCTAG	4323	False	NA	NA	False	NA	NA	NA	52332432	52332621	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_52332400_52332600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051599	chr14	+	197	1	Intergenic	novelGene_1642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGTGAGTACACTGTAG	NA	False	NA	14	True	NA	NA	NA	52350427	52350624	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_52350400_52350600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051603	chr14	-	191	1	Intergenic	novelGene_1643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGTCATCCTTGATGTT	NA	False	NA	NA	False	NA	NA	NA	52352548	52352357	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_52352400_52352500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051610	chr14	-	183	1	Intergenic	novelGene_1644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTCCTGGGAATTTCTG	2096	False	NA	NA	False	NA	NA	NA	52367612	52367429	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_52367400_52367600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051617	chr14	+	180	1	Intergenic	novelGene_1645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	52376543	52376723	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_52376500_52376700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051623	chr14	-	4720	26	FSM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	-47	0	-47	0	multi-exon	FALSE	canonical	3	979	junction_21	82.6076606617086	902	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTTATGACCATTT	NA	False	NA	-1	True	AATAAA	-40	NA	52434920	52397870	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051639	chr14	-	2688	8	FSM	ENSMUSG00000022159.17	ENSMUST00000022765.14	2906	8	218	0	12	0	multi-exon	FALSE	canonical	3	132	junction_5	9.75202752335772	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTGTCATTTCTGAC	NA	False	NA	1	True	ATTAAA	-27	NA	52516784	52499215	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_52501275_52502155_52502225_52503646_52503759_52506098_52506192_52506374_52506458_52512899_52512968_52516370_52516443_52516652
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051652	chr14	+	248	1	Intergenic	novelGene_1646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAATCTTATCTCATTTCT	NA	False	NA	NA	False	AAAAAG	-27	NA	52507320	52507568	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_52507300_52507600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051671	chr14	-	2021	11	FSM	ENSMUSG00000022160.19	ENSMUST00000022767.16	2025	11	4	0	0	0	multi-exon	FALSE	canonical	3	126	junction_7	19.5910693939866	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGCTTTCCACTTAGTG	NA	False	NA	-16	True	AATAAA	-39	NA	52542581	52532297	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_52532551_52533530_52533644_52533972_52534039_52534120_52534230_52534375_52534415_52534927_52535116_52535325_52535543_52536096_52536273_52537157_52537563_52537640_52537859_52542344
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051684	chr14	+	187	1	Antisense	novelGene_ENSMUSG00000022160.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGGAAGGGTTAAACAATT	NA	False	NA	NA	False	NA	NA	NA	52534428	52534615	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr14_+_52534400_52534600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051687	chr14	+	192	1	Antisense	novelGene_ENSMUSG00000022160.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGGGATTACAGGCATG	NA	False	NA	NA	False	NA	NA	NA	52541198	52541390	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr14_+_52541200_52541400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051694	chr14	-	223	1	Intergenic	novelGene_1647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	52548127	52547904	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_52547900_52548100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051715	chr14	+	2411	7	FSM	ENSMUSG00000040997.15	ENSMUST00000239403.2	2406	7	-5	0	-5	0	multi-exon	FALSE	canonical	3	303	junction_1	38.1200588783502	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACTGTTTAATATTGAT	NA	False	NA	16	True	AATAAA	-23	NA	54496683	54506626	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_54496777_54499082_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051728	chr14	+	185	1	Intergenic	novelGene_1648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATATAAAGTTACCAT	NA	False	NA	NA	False	NA	NA	NA	54529195	54529380	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_54529200_54529400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051735	chr14	+	151	1	Intergenic	novelGene_1649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATCTCAAATGCTTGACT	NA	False	NA	NA	False	NA	NA	NA	54580570	54580721	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_54580600_54580700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051772	chr14	+	193	1	Intergenic	novelGene_1650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCACTACTGGGTGTCAT	1260	False	NA	NA	False	NA	NA	NA	54626746	54626939	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_54626700_54626900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051777	chr14	+	175	1	Intergenic	novelGene_1651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAATCATGTACCG	NA	False	NA	NA	False	NA	NA	NA	54637267	54637442	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_54637300_54637400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051782	chr14	+	193	1	Intergenic	novelGene_1652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAGAACAAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	54660054	54660247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_54660100_54660200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051792	chr14	+	420	5	FSM	ENSMUSG00000010406.13	ENSMUST00000010550.12	418	5	-2	0	-2	0	multi-exon	FALSE	canonical	3	1056	junction_1	196.876230154887	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTCTGGCTTTCTTTTC	NA	False	NA	27	True	AATAAA	-28	NA	54664363	54667213	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_54664418_54664490_54664549_54664627_54664696_54666040_54666106_54667038
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051799	chr14	+	491	4	NIC	ENSMUSG00000010406.13	novel	418	5	NA	NA	0	1	intron_retention	FALSE	canonical	3	1056	junction_1	226.233409459248	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGACTCTCTCTGGCTTT	NA	False	NA	21	True	AATAAA	-22	NA	54664365	54667207	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_+_54664418_54664490_54664696_54666040_54666106_54667038
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051812	chr14	+	3009	7	FSM	ENSMUSG00000022175.10	ENSMUST00000022782.10	4228	7	10	1209	10	545	multi-exon	TRUE	canonical	3	169	junction_1	20.8306664959782	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATCAGCTGTGAGCCTGC	NA	False	NA	12	True	AATAAA	-25	NA	54701603	54707745	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_54702069_54702360_54702406_54703030_54703167_54704916_54705108_54705220_54706239_54706492_54706623_54706721
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051819	chr14	-	2559	17	FSM	ENSMUSG00000023110.13	ENSMUST00000023873.12	2691	17	139	-7	7	7	multi-exon	FALSE	canonical	3	685	junction_14	59.4941895797396	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTCTGCCTGCCTGTT	4834	False	NA	-4	True	AATAAA	-32	NA	54754843	54744636	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754703
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051843	chr14	-	1575	10	FSM	ENSMUSG00000022177.10	ENSMUST00000022784.9	1587	10	13	-1	13	1	multi-exon	FALSE	canonical	3	401	junction_5	37.1423687391577	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTAGTCATTTTTCCTT	NA	False	NA	0	True	AATAAA	-21	NA	54791805	54779240	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_54779715_54779839_54779909_54781235_54781367_54781661_54781808_54783182_54783280_54786322_54786458_54787125_54787258_54787350_54787494_54789593_54789668_54791631
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051850	chr14	-	3442	8	FSM	ENSMUSG00000022178.12	ENSMUST00000054487.10	3397	8	-40	-5	-40	5	multi-exon	TRUE	canonical	3	297	junction_5	54.835933399886	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTATTGTGGTTCTTC	NA	False	NA	-1	True	AGTAAA	-23	NA	54815055	54804923	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_54806514_54806932_54807002_54807701_54807754_54807833_54807965_54809057_54809121_54809222_54809291_54810848_54810951_54813688
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051861	chr14	-	2596	7	FSM	ENSMUSG00000022179.6	ENSMUST00000022786.6	2670	7	74	0	74	0	multi-exon	FALSE	canonical	3	19	junction_6	4.10960933531265	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTGTTGGGCTTAGT	NA	False	NA	-1	True	NA	NA	NA	54843376	54821119	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_54822164_54822435_54822549_54823108_54823213_54823392_54823455_54828578_54828897_54832570_54833409_54843259
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051869	chr14	+	209	1	Intergenic	novelGene_1653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTGTCCGTCAATAGAGAA	NA	False	NA	NA	False	NA	NA	NA	54837528	54837737	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_54837500_54837700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051876	chr14	-	908	3	FSM	ENSMUSG00000022193.8	ENSMUST00000022803.6	899	3	-2	-7	-2	7	multi-exon	FALSE	canonical	3	1854	junction_2	4.5	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCACAGTTATTTCAGTGC	8622	False	NA	-10	True	AATAAA	-25	NA	54855481	54851568	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_54851939_54853971_54854279_54855250
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051890	chr14	-	2305	12	NIC	ENSMUSG00000022185.20	novel	2373	13	NA	NA	-2	0	intron_retention	FALSE	canonical	2	44	junction_11	118.32012885626	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	3742	False	NA	0	True	AATAAA	-25	NA	54891154	54879617	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54891136
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051900	chr14	-	2538	13	NIC	ENSMUSG00000022185.20	novel	2494	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_12	135.990706381805	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	3758	False	NA	0	True	AATAAA	-25	NA	54891138	54879617	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54890670_54890775_54890991
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051911	chr14	-	2301	12	NIC	ENSMUSG00000022185.20	novel	2365	13	NA	NA	-1	0	intron_retention	FALSE	canonical	2	44	junction_11	142.865538124038	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	3743	False	NA	0	True	AATAAA	-25	NA	54891153	54879617	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884291_54885544_54885588_54889173_54889316_54891136
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051912	chr14	-	2499	13	FSM	ENSMUSG00000022185.20	ENSMUST00000150371.8	2494	13	1	-6	0	0	multi-exon	FALSE	canonical	3	46	junction_12	131.761437412047	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	3758	False	NA	0	True	AATAAA	-25	NA	54891138	54879617	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54890670_54890736_54890991
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051923	chr14	-	2442	12	FSM	ENSMUSG00000022185.20	ENSMUST00000126166.8	2369	12	-73	0	2	0	multi-exon	FALSE	canonical	3	94	junction_11	105.5899600787	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	3750	False	NA	0	True	AATAAA	-25	NA	54891146	54879617	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54890991
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051955	chr14	-	2499	13	NIC	ENSMUSG00000022185.20	novel	2494	13	NA	NA	0	-2	intron_retention	FALSE	canonical	3	25	junction_12	154.077429127912	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTGAGTGCCTTTCCTT	3758	False	NA	-3	True	AATAAA	-22	NA	54891138	54879620	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884025_54884159_54884294_54885544_54885588_54889173_54889316_54890670_54890775_54890991
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051982	chr14	+	1497	3	FSM	ENSMUSG00000040822.8	ENSMUST00000228027.2	811	3	-58	-628	-37	0	multi-exon	FALSE	canonical	3	26	junction_1	179.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTACTGGTGATTCACAT	NA	False	NA	NA	False	AATAAA	-26	NA	54923635	54928198	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_54924111_54924493_54924578_54927260
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000051999	chr14	+	200	1	Intergenic	novelGene_1654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTTACTTGGTGTGGT	6117	False	NA	NA	False	NA	NA	NA	55069056	55069256	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_55069100_55069300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052002	chr14	-	286	1	Intergenic	novelGene_1655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGGGGCAGGTGTTGAG	9240	False	NA	NA	False	AATAAA	-26	NA	55083151	55082865	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_55082900_55083200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052014	chr14	+	209	2	Antisense	novelGene_ENSMUSG00000057156.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCGATCCTTCTCAAGGA	3603	False	NA	NA	False	NA	NA	NA	55098677	55109284	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr14_+_55098827_55109224
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052028	chr14	+	172	1	Intergenic	novelGene_1656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAAGGGCAGTATCA	7337	False	NA	NA	False	NA	NA	NA	55102411	55102583	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_55102400_55102600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052032	chr14	-	187	1	Intergenic	novelGene_1657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATACACTTGTACCACAA	NA	False	NA	NA	False	NA	NA	NA	55117017	55116830	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_55116800_55117000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052053	chr14	+	2542	6	FSM	ENSMUSG00000022194.16	ENSMUST00000116476.9	1761	6	-10	-771	-10	758	multi-exon	FALSE	canonical	3	2245	junction_1	149.688209288507	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTTGGATGTTTTTTAG	NA	False	NA	22	True	AATAAA	-21	NA	55131594	55136384	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052064	chr14	+	3643	4	ISM	ENSMUSG00000022194.16	ENSMUST00000022808.14	1030	7	-5	-755	-5	755	intron_retention	FALSE	canonical	3	2245	junction_1	150.813350425838	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCCTTTGGATGTTTTT	NA	False	NA	19	True	AATAAA	-18	NA	55131599	55136381	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052066	chr14	+	2615	5	FSM	ENSMUSG00000022194.16	ENSMUST00000150975.8	1775	5	-12	-828	-5	755	multi-exon	FALSE	canonical	3	2245	junction_1	156.472641378613	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCCTTTGGATGTTTTT	NA	False	NA	19	True	AATAAA	-18	NA	55131599	55136381	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052071	chr14	+	1869	6	NIC	ENSMUSG00000022194.16	novel	1030	7	NA	NA	-3	755	intron_retention	FALSE	canonical	3	2071	junction_5	223.846018503792	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCCTTTGGATGTTTTT	NA	False	NA	19	True	AATAAA	-18	NA	55131601	55136381	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134730_55135473
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052089	chr14	+	1364	11	FSM	ENSMUSG00000022204.10	ENSMUST00000022815.10	1200	11	88	-252	88	252	multi-exon	FALSE	canonical	3	1001	junction_1	176.552230232303	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGCGTTTGTTGACCTG	NA	False	NA	NA	False	AATAAA	-16	NA	55252998	55261846	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_55253046_55253625_55253686_55254522_55254595_55258510_55258649_55258850_55258936_55259012_55259066_55259277_55259402_55259494_55259664_55260506_55260664_55260792_55260851_55261445
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052134	chr14	+	1944	9	NIC	ENSMUSG00000040618.8	novel	2784	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_4	532.016447114185	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGGACTCCCCATGCT	9014	False	NA	27	True	ATTAAA	-24	NA	55777845	55786329	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052141	chr14	+	2765	8	NIC	ENSMUSG00000040618.8	novel	2417	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	1534	junction_5	88.3409443518666	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGGACTCCCCATGCT	9014	False	NA	27	True	ATTAAA	-24	NA	55777845	55786329	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052220	chr14	-	3480	30	NNC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-11	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	95.3179422093	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGAAGCAGCTGTGACGT	9787	False	NA	-5	True	AATAAA	-23	NA	55873099	55863174	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866529_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052239	chr14	-	2506	5	FSM	ENSMUSG00000002320.16	ENSMUST00000002391.15	2382	5	-29	-95	2	0	multi-exon	FALSE	canonical	3	260	junction_2	41.5060236592232	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCGTTGGAAGTTTTG	5177	False	NA	51	True	AATAAA	-19	NA	55880826	55873421	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052241	chr14	-	2269	6	FSM	ENSMUSG00000002320.16	ENSMUST00000120041.8	2164	6	-105	0	-2	0	multi-exon	FALSE	canonical	3	29	junction_5	125.802384715076	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCGTTGGAAGTTTTG	5190	False	NA	51	True	AATAAA	-19	NA	55880813	55873421	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050_55880413_55880636
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052278	chr14	-	1664	6	FSM	ENSMUSG00000002329.8	ENSMUST00000002400.7	1733	6	59	10	2	5	multi-exon	FALSE	canonical	3	347	junction_4	50.5750926840476	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGACAATTTTCTTTAA	2344	False	NA	-18	True	AATAAA	-19	NA	55897906	55895345	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444_55897556_55897624_55897686_55897794
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052279	chr14	-	1735	5	FSM	ENSMUSG00000002329.8	ENSMUST00000226659.2	1730	5	0	-5	0	5	multi-exon	FALSE	canonical	3	428	junction_3	25.3673017879316	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGACAATTTTCTTTAA	2342	False	NA	-18	True	AATAAA	-19	NA	55897908	55895345	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444_55897686_55897794
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052286	chr14	-	827	4	FSM	ENSMUSG00000010376.16	ENSMUST00000010520.10	824	4	3	-6	3	6	multi-exon	FALSE	canonical	3	1795	junction_3	42.0502345085283	352	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTCTTCTTGACACAAA	NA	False	NA	-5	True	AATAAA	-21	NA	55909578	55899713	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_55900083_55900871_55900955_55901268_55901317_55909251
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052300	chr14	+	1492	10	FSM	ENSMUSG00000002326.7	ENSMUST00000002397.7	1993	10	45	456	22	428	multi-exon	TRUE	canonical	3	97	junction_1	15.6828127988557	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTAGACGTTCTTCTAT	NA	False	NA	21	True	ATTAAA	-22	NA	55909736	55916201	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_55909842_55910162_55910259_55910406_55910527_55912783_55912868_55913015_55913190_55914211_55914294_55914384_55914492_55914662_55914706_55915327_55915488_55915680
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052324	chr14	-	2746	15	FSM	ENSMUSG00000022218.17	ENSMUST00000178034.9	2730	15	-1	-15	-1	0	multi-exon	FALSE	canonical	3	107	junction_14	38.2803834241775	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTCTGTCTAGGCCAA	395	False	NA	-8	True	AATAAA	-37	NA	55950952	55937475	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_55937886_55941760_55941898_55942264_55942426_55942914_55943197_55943297_55943452_55943896_55943986_55946110_55946215_55946339_55946479_55946850_55947026_55947378_55947487_55947924_55948044_55948395_55948645_55949557_55949747_55949890_55950212_55950843
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052327	chr14	-	2831	15	FSM	ENSMUSG00000022218.17	ENSMUST00000168729.8	2852	15	-3	24	-1	1	multi-exon	FALSE	canonical	3	23	junction_14	53.0521499304684	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGTTTAGTAGTCCTG	395	False	NA	-22	True	AATAAA	-23	NA	55950952	55937489	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_55937886_55941760_55941898_55942264_55942426_55942914_55943197_55943297_55943452_55943896_55943986_55946110_55946215_55946339_55946479_55946850_55947026_55947378_55947487_55947924_55948044_55948395_55948645_55949557_55949747_55949890_55950212_55950744
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052339	chr14	-	2437	17	FSM	ENSMUSG00000040472.16	ENSMUST00000227061.2	2882	17	-3	448	-3	13	multi-exon	FALSE	canonical	3	103	junction_16	117.751443064406	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTCACCGGGCAGTGG	NA	False	NA	NA	False	NA	NA	NA	55959662	55953320	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959509
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052342	chr14	-	2342	17	FSM	ENSMUSG00000040472.16	ENSMUST00000163889.3	1886	17	5	-461	-1	13	multi-exon	FALSE	canonical	3	119	junction_16	115.082697847027	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTCACCGGGCAGTGG	NA	False	NA	NA	False	NA	NA	NA	55959715	55953320	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959657
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052372	chr14	-	1421	9	FSM	ENSMUSG00000002332.17	ENSMUST00000002403.10	1477	9	56	0	-35	0	multi-exon	FALSE	canonical	3	126	junction_7	15.4833580014156	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGAGTTCTCATTCTGT	NA	False	NA	0	True	AATAAA	-20	NA	55983091	55976476	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_55976878_55977008_55977090_55977392_55977463_55978183_55978331_55978639_55978773_55980910_55980991_55981114_55981259_55982374_55982546_55982897
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052414	chr14	+	7375	8	FSM	ENSMUSG00000075592.11	ENSMUST00000168479.3	7511	8	136	0	117	0	multi-exon	FALSE	canonical	3	80	junction_1	7.49965985623239	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAATGTTTAATTTTTTTT	NA	False	NA	15	True	AATAAA	-15	NA	56091609	56112193	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_56091884_56100409_56101069_56101189_56102591_56103415_56103547_56103667_56103765_56105477_56105580_56105870_56105973_56107584
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052425	chr14	+	5868	8	FSM	ENSMUSG00000047153.5	ENSMUST00000022831.5	3898	8	29	-1999	2	5	multi-exon	FALSE	canonical	3	63	junction_2	8.07111250961459	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGCTACTACTCATTTT	NA	False	NA	11	True	NA	NA	NA	56122432	56136237	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_56122600_56123230_56123449_56123948_56125076_56125170_56125302_56125377_56125475_56131448_56131557_56131743_56131846_56132319
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052432	chr14	-	1208	6	FSM	ENSMUSG00000022223.10	ENSMUST00000111325.5	1255	6	47	0	0	0	multi-exon	FALSE	canonical	3	98	junction_5	35.4547599061113	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTTCCGCTGTCTC	NA	False	NA	-6	True	AATAAA	-20	NA	56137668	56134739	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_56135470_56135699_56135844_56136640_56136763_56137103_56137187_56137270_56137378_56137646
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052442	chr14	+	4027	23	FSM	ENSMUSG00000022229.4	ENSMUST00000007340.4	3950	23	-76	-1	-76	1	multi-exon	FALSE	canonical	2	6	junction_18	2.50989776223246	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGTGTCATTGTGGCAT	NA	False	NA	6	True	AGTAAA	-15	NA	56602448	56626008	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_56602747_56603405_56603556_56605839_56605900_56608232_56608434_56609195_56609310_56610035_56610171_56610299_56610418_56610644_56610914_56611883_56612083_56612216_56612327_56613594_56613730_56615739_56615933_56617404_56617581_56618219_56618357_56619953_56620105_56621523_56621693_56621782_56621938_56623249_56623374_56623568_56623715_56624304_56624439_56624606_56624709_56625096_56625189_56625349
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052448	chr14	+	3549	26	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-38	5	combination_of_known_junctions	TRUE	canonical	3	349	junction_12	57.9852946875326	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTTCCTTTTTTTTTTT	NA	False	NA	13	True	ATTAAA	-21	NA	56640115	56726897	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052471	chr14	+	4131	25	ISM	ENSMUSG00000000365.10	ENSMUST00000095793.3	5264	37	98	37223	-18	743	5prime_fragment	FALSE	canonical	3	349	junction_12	56.9559862964377	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAAAGCACATTTG	NA	False	NA	NA	False	NA	NA	NA	56640135	56725266	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052472	chr14	+	5171	37	FSM	ENSMUSG00000000365.10	ENSMUST00000095793.3	5264	37	98	-5	-18	5	multi-exon	FALSE	canonical	3	48	junction_25	208.622769314721	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCATGTTATTAAGATTCT	NA	False	NA	22	True	AATAAA	-23	NA	56640135	56762494	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56730574_56730862_56737884_56738049_56741374_56741495_56743383_56743465_56745274_56745401_56746735_56746793_56749667_56749785_56751492_56751662_56753792_56753929_56759830_56760021_56761762_56761863_56762269
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052509	chr14	-	4342	17	NIC	ENSMUSG00000064128.9	novel	4756	18	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	3	37	junction_16	11.6039796513955	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTTTTACATTCTTTG	2390	False	NA	NA	False	AATAAA	-43	NA	56809305	56764219	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_-_56764569_56767144_56767266_56767346_56767432_56767506_56767648_56769692_56769807_56770032_56770098_56772212_56772298_56772807_56773051_56780221_56780388_56786880_56787014_56789379_56791007_56791116_56791220_56792546_56792659_56796029_56796294_56801409_56801534_56802125_56802625_56809194
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052518	chr14	+	188	1	Intergenic	novelGene_1658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAATGTTATTTACATAGT	NA	False	NA	NA	False	NA	NA	NA	56881788	56881976	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_56881800_56882000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052529	chr14	+	2942	14	FSM	ENSMUSG00000079184.11	ENSMUST00000116468.2	2939	14	0	-3	0	3	multi-exon	FALSE	canonical	3	627	junction_4	88.7108193370776	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTAGTCGTTGTGAGTT	1778	False	NA	35	True	ATTAAA	-21	NA	56905704	56934890	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_56906022_56909861_56910018_56911347_56912197_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052537	chr14	+	2964	14	NNC	ENSMUSG00000079184.11	novel	2939	14	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_3	214.971059012644	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTACTAGTCGTTGTGA	1789	False	NA	32	True	ATTAAA	-18	NA	56905715	56934887	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr14_+_56906022_56909861_56910018_56911347_56912233_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052544	chr14	-	2414	9	FSM	ENSMUSG00000021938.13	ENSMUST00000022507.13	4114	9	-31	1731	-31	1545	multi-exon	FALSE	canonical	3	306	junction_8	29.8556422640679	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGAAAGTAAATCTCTT	NA	False	NA	0	True	AATAAA	-22	NA	57015804	56959897	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_56960738_56962762_56962933_56965976_56966035_56986291_56986401_56996086_56996172_56999290_56999488_57001605_57001702_57009161_57009464_57015247
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052554	chr14	+	218	1	Intergenic	novelGene_1659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATGTACTAAATAAAACAG	NA	False	NA	NA	False	NA	NA	NA	56973428	56973646	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_56973400_56973600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052562	chr14	+	167	1	Intergenic	novelGene_1660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGGGCTTTACCACAAC	NA	False	NA	NA	False	NA	NA	NA	56974473	56974640	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_56974500_56974600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052570	chr14	+	240	1	Intergenic	novelGene_1661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	284	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAAGTATCAGTTTCTAG	NA	False	NA	NA	False	NA	NA	NA	57009902	57010142	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_57009900_57010100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052593	chr14	-	233	1	Intergenic	novelGene_1662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATGGCCTAGGTG	NA	False	NA	NA	False	ATTAAA	-8	NA	57077975	57077742	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_57077700_57078000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052603	chr14	+	4980	25	NIC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-98	187	combination_of_known_junctions	TRUE	canonical	2	100	junction_12	26.7082683306541	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGACTTTCTGCATCAC	NA	False	NA	26	True	ATTAAA	-20	NA	57124011	57197996	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052624	chr14	+	212	1	Intergenic	novelGene_1663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACATTGTGTACTTTTTC	NA	False	NA	NA	False	AAAAAG	-4	NA	57628438	57628650	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_57628400_57628600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052633	chr14	+	3079	26	FSM	ENSMUSG00000040040.17	ENSMUST00000122063.8	3088	26	9	0	-9	0	multi-exon	TRUE	canonical	3	32	junction_12	10.0195009855781	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGAGGCTAATGACTTC	NA	False	NA	13	True	AATAAA	-15	NA	57661527	57755393	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_57661645_57667994_57668091_57672251_57672315_57674683_57674741_57675698_57675753_57676322_57676387_57677162_57677233_57678387_57678479_57679334_57679440_57681811_57681915_57683021_57683137_57684997_57685230_57688127_57688199_57692917_57693005_57710431_57710532_57713499_57713587_57715347_57715535_57717353_57717463_57718113_57718265_57718852_57718969_57725028_57725082_57726348_57726415_57733629_57733737_57744661_57744729_57754437_57754549_57754793
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052646	chr14	+	238	1	Intergenic	novelGene_1664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGGCCCTACTCAAAGA	NA	False	NA	NA	False	NA	NA	NA	57714394	57714632	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_57714400_57714600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052648	chr14	-	178	1	Intergenic	novelGene_1665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATCACCTTCCCGTGTAT	NA	False	NA	NA	False	NA	NA	NA	57722962	57722784	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_57722800_57723000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052659	chr14	-	178	1	Intergenic	novelGene_1666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGGGGGGGGGACTACA	NA	False	NA	NA	False	NA	NA	NA	57785757	57785579	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_57785600_57785800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052686	chr14	+	181	1	Intergenic	novelGene_1667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATATATCCATTTC	NA	False	NA	NA	False	NA	NA	NA	57914650	57914831	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_57914600_57914800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052692	chr14	+	158	1	Intergenic	novelGene_1668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAATCAATAAA	NA	False	NA	NA	False	NA	NA	NA	57970667	57970825	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_57970700_57970800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052701	chr14	+	190	1	Intergenic	novelGene_1669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATGAATGGCAAATACC	NA	False	NA	NA	False	NA	NA	NA	58020489	58020679	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_58020500_58020700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052706	chr14	+	1925	4	FSM	ENSMUSG00000021963.18	ENSMUST00000128764.9	5125	4	34	3166	-4	1137	multi-exon	FALSE	canonical	3	2836	junction_1	125.222468697381	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAGAGTGACTGCCTATC	NA	False	NA	NA	False	NA	NA	NA	58035670	58040929	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_58035812_58035944_58036055_58038950_58039074_58039378
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052731	chr14	+	531	2	FSM	ENSMUSG00000021967.5	ENSMUST00000022538.5	2877	2	2	2344	2	4	multi-exon	FALSE	canonical	3	956	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCTCATACGGAATACT	NA	False	NA	29	True	ATTAAA	-21	NA	58063692	58064409	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_58063780_58063965
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052739	chr14	+	511	2	NNC	ENSMUSG00000021967.5	novel	2877	2	NA	NA	11	2	at_least_one_novel_splicesite	FALSE	canonical	3	155	junction_1	0	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGTCTCATACGGAATA	NA	False	NA	27	True	ATTAAA	-19	NA	58063701	58064407	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr14_+_58063771_58063965
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052746	chr14	+	687	1	FSM	ENSMUSG00000021967.5	ENSMUST00000224313.2	519	1	-166	-2	30	2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGTCTCATACGGAATA	NA	False	NA	27	True	ATTAAA	-19	NA	58063720	58064407	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_58063700_58064400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052754	chr14	+	190	1	Intergenic	novelGene_1670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTGTCTCAGCTGGGC	NA	False	NA	NA	False	NA	NA	NA	58129452	58129642	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_58129500_58129600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052759	chr14	+	191	1	Intergenic	novelGene_1671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGAGTATTTATTGTGAAC	NA	False	NA	NA	False	NA	NA	NA	58132280	58132471	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_58132300_58132500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052775	chr14	+	245	1	Intergenic	novelGene_1672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	621	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAGTAAAAAGAAATCAGAG	NA	False	NA	NA	False	AAAAAG	-7	NA	58157628	58157873	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_58157600_58157900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052785	chr14	-	210	1	Intergenic	novelGene_1673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAATTTCTATATGTAAT	NA	False	NA	NA	False	AAAAAG	-11	NA	58164629	58164419	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_58164400_58164600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052799	chr14	+	3902	12	FSM	ENSMUSG00000035469.18	ENSMUST00000043227.13	3903	12	3	-2	3	2	multi-exon	FALSE	canonical	3	265	junction_1	28.7856139459962	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTACAGTTGTGGTTGTT	NA	False	NA	8	True	AATAAA	-18	NA	59438679	59474716	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_59439034_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052809	chr14	+	3894	12	NIC	ENSMUSG00000035469.18	novel	3903	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	56	junction_1	78.7866666573425	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTACAGTTGTGGTTG	NA	False	NA	6	True	AATAAA	-16	NA	59438682	59474714	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_+_59439034_59447376_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052820	chr14	-	1342	11	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5087	1	at_least_one_novel_splicesite	FALSE	canonical	3	278	junction_1	39.5924235176378	56	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGTGCACCGTTTATT	NA	False	NA	0	True	AATAAA	-17	NA	59608006	59586179	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr14_-_59586501_59586670_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052832	chr14	-	1511	10	NNC	ENSMUSG00000068245.15	novel	1130	10	NA	NA	-5087	0	intron_retention	FALSE	canonical	3	300	junction_3	34.2669260690571	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTGTGCACCGTTTAT	NA	False	NA	-1	True	AATAAA	-16	NA	59608006	59586180	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr14_-_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052844	chr14	-	2998	14	FSM	ENSMUSG00000071350.13	ENSMUST00000161459.8	2995	14	1	-4	1	4	multi-exon	FALSE	canonical	3	96	junction_12	10.965249034588	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTGATTATTATTTAT	NA	False	NA	NA	False	TATAAA	-17	NA	59678332	59639453	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59663937_59664004_59668591_59668718_59674885_59675215_59678035
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052853	chr14	+	3063	11	FSM	ENSMUSG00000021981.11	ENSMUST00000022553.6	3037	11	-24	-2	-15	2	multi-exon	FALSE	canonical	3	224	junction_1	43.2892596379287	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTCTCATTCCTCTTC	NA	False	NA	7	True	AATAAA	-14	NA	59678405	59786354	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_59678468_59696542_59696691_59699083_59699152_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510_59776655_59784434
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052865	chr14	-	2236	10	FSM	ENSMUSG00000021982.15	ENSMUST00000056997.15	2202	10	-2	-32	0	32	multi-exon	FALSE	canonical	3	30	junction_1	34.1362556619393	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTTGTTGTTGTTGT	NA	False	NA	0	True	NA	NA	NA	59835395	59801392	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_59802045_59806396_59806458_59811095_59811286_59813182_59813353_59818773_59818824_59823487_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052880	chr14	+	3119	2	FSM	ENSMUSG00000044461.7	ENSMUST00000053949.7	3119	2	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCGGGGAATGCTTATT	NA	False	NA	5	True	AATAAA	-17	NA	59862756	59869109	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_59863850_59867083
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052890	chr14	-	3865	15	FSM	ENSMUSG00000114797.2	ENSMUST00000041905.8	3913	15	54	-6	-8	6	multi-exon	FALSE	canonical	3	173	junction_2	25.178546099278	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGGTCTCAGCAGTTGTA	NA	False	NA	-10	True	AATAAA	-24	NA	60488902	60455520	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_60457608_60459031_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052908	chr14	+	3825	14	FSM	ENSMUSG00000021987.10	ENSMUST00000022563.9	3813	14	-11	-1	-11	1	multi-exon	FALSE	canonical	3	64	junction_3	13.0256915000032	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGAGTGTTTTTCTTTTG	NA	False	NA	10	True	ATTAAA	-14	NA	60502665	60539820	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_60502811_60514577_60514695_60517531_60517695_60519385_60519544_60522365_60522495_60526991_60527127_60529442_60529576_60530366_60530477_60530832_60530959_60533568_60533619_60534022_60534224_60535511_60535644_60536363_60536491_60537721
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052913	chr14	-	183	1	Intergenic	novelGene_1674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTTCTTTAACCAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	60791003	60790820	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_60790800_60791000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052930	chr14	+	2402	19	FSM	ENSMUSG00000021993.11	ENSMUST00000063562.9	3015	19	-3	616	-3	-616	multi-exon	FALSE	canonical	3	187	junction_10	24.3726850752595	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTCTCACCTGCTTGGC	NA	False	NA	NA	False	AATAAA	-20	NA	61022018	61141062	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_61022320_61024743_61024918_61025602_61025692_61028335_61028423_61033620_61033685_61039569_61039753_61040261_61040419_61046416_61046466_61048547_61048609_61052401_61052455_61064747_61064902_61066835_61066914_61068561_61068767_61071433_61071544_61080656_61080732_61083832_61083953_61109466_61109589_61112682_61112757_61140816
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052934	chr14	-	4021	10	FSM	ENSMUSG00000060548.14	ENSMUST00000111236.4	3958	10	-37	-26	-37	26	multi-exon	FALSE	canonical	3	37	junction_9	15.475986974649	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATGTGTCAAGTCAAAAT	NA	False	NA	0	True	AATAAA	-21	NA	61275436	61201297	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_61203915_61208277_61208681_61209429_61209533_61210950_61211077_61212038_61212204_61234053_61234140_61242523_61242703_61261617_61261729_61262192_61262286_61275298
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052935	chr14	-	4337	10	FSM	ENSMUSG00000060548.14	ENSMUST00000111234.10	4051	10	-99	-187	-78	26	multi-exon	FALSE	canonical	3	46	junction_9	13.3813948598441	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATGTGTCAAGTCAAAAT	NA	False	NA	0	True	AATAAA	-21	NA	61284017	61201297	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_61203915_61208277_61208681_61209429_61209533_61210950_61211077_61212038_61212204_61234053_61234140_61242523_61242703_61261617_61261729_61262192_61262286_61283563
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052951	chr14	-	859	4	FSM	ENSMUSG00000021928.10	ENSMUST00000022494.10	10092	4	-16	9249	-16	-1226	multi-exon	FALSE	canonical	3	296	junction_1	24.8506650928211	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGGTGTGACTTAGTAG	NA	False	NA	-5	True	ATTAAA	-18	NA	61597904	61578439	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_61578854_61579536_61579676_61584820_61584891_61597668
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052971	chr14	+	188	1	Intergenic	novelGene_1675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACCTGAAACTATGTCAA	9125	False	NA	NA	False	NA	NA	NA	61657585	61657773	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_61657600_61657800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052973	chr14	+	185	1	Intergenic	novelGene_1676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGATACTCTCACCAATG	NA	False	NA	NA	False	NA	NA	NA	61703925	61704110	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_61703900_61704100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052989	chr14	+	1634	3	FSM	ENSMUSG00000035235.14	ENSMUST00000165015.9	1619	3	-15	0	-15	0	multi-exon	FALSE	canonical	3	46	junction_1	100	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGAGTTTGTGCTGTG	NA	False	NA	18	True	AATAAA	-16	NA	61835680	61843395	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_61835796_61837242_61837345_61841978
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000052997	chr14	+	1550	3	FSM	ENSMUSG00000035235.14	ENSMUST00000039562.8	1550	3	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	49	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGAGTTTGTGCTGTG	NA	False	NA	18	True	AATAAA	-16	NA	61836988	61843395	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_61837020_61837242_61837345_61841978
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053005	chr14	+	188	1	Antisense	novelGene_ENSMUSG00000098183.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTGGCACACATGAGAGA	1889	False	NA	NA	False	NA	NA	NA	61863569	61863757	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr14_+_61863600_61863800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053011	chr14	+	200	1	Genic_Genomic	ENSMUSG00000098088.2	novel	NA	NA	NA	NA	751	20	mono-exon	FALSE	NA	NA	NA	NA	NA	364	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATTTCCTTTGAAATAA	6003	False	NA	NA	False	NA	NA	NA	61867683	61867883	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr14_+_61867700_61867900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053021	chr14	-	230	1	Intergenic	novelGene_1677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTTATAAAGTGTCATT	NA	False	NA	NA	False	NA	NA	NA	62078293	62078063	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_62078100_62078300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053032	chr14	+	1368	10	NIC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	22	4	combination_of_known_splicesites	TRUE	canonical	3	239	junction_2	190.414168473765	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATAGTTTTGTTGCTTTTT	NA	False	NA	9	True	AATAAA	-21	NA	62569538	62610445	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_+_62569626_62584016_62584092_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053034	chr14	+	1476	11	FSM	ENSMUSG00000021932.14	ENSMUST00000022499.13	1494	11	22	-4	22	4	multi-exon	FALSE	canonical	3	538	junction_2	112.951139879153	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATAGTTTTGTTGCTTTTT	NA	False	NA	9	True	AATAAA	-21	NA	62569538	62610445	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053049	chr14	-	6371	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	0	-4511	intron_retention	FALSE	canonical	3	165	junction_3	83.8071604244429	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCACCTTGGCTTGATTT	NA	False	NA	-1	True	AATAAA	-28	NA	62998587	62927763	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938109_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053050	chr14	-	6401	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	0	-4511	intron_retention	FALSE	canonical	3	358	junction_3	52.091548371734	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCACCTTGGCTTGATTT	NA	False	NA	-1	True	AATAAA	-28	NA	62998587	62927763	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053069	chr14	-	3899	19	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	1	-7205	intron_retention	FALSE	canonical	3	18	junction_14	156.302502290342	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGTGTGGTTTAGGAAA	NA	False	NA	-6	True	AATAAA	-13	NA	62998586	62930457	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938109_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62971076_62971300_62981357_62981448_62996649_62996800_62997614_62997693_62997996
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053070	chr14	-	3704	18	FSM	ENSMUSG00000035161.8	ENSMUST00000223585.2	10883	18	-26	7205	0	-7205	multi-exon	FALSE	canonical	3	25	junction_12	114.295797874483	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGTGTGGTTTAGGAAA	NA	False	NA	-6	True	AATAAA	-13	NA	62998587	62930457	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951289_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053077	chr14	+	175	1	Intergenic	novelGene_1678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTAACTATATCCAAACTA	3070	False	NA	NA	False	NA	NA	NA	62963764	62963939	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_62963800_62963900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053084	chr14	-	176	1	Intergenic	novelGene_1679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATATGAGGGTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	63013739	63013563	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_63013600_63013700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053092	chr14	-	183	1	Intergenic	novelGene_1680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATCTTTCTAGATATGAC	5761	False	NA	NA	False	NA	NA	NA	63239761	63239578	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_63239600_63239800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053096	chr14	+	4774	10	FSM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	-31	0	-31	0	multi-exon	FALSE	canonical	3	6333	junction_1	582.432086858605	2954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTTCCTGTCATCATT	NA	False	NA	NA	False	ATTAAA	-18	NA	63359879	63383372	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053103	chr14	+	3408	9	NIC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	2	1272	intron_retention	FALSE	canonical	3	6333	junction_1	614.086605760946	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCAGGGTGCACGGTT	NA	False	NA	26	True	AATAAA	-21	NA	63359964	63380584	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053123	chr14	-	1827	7	FSM	ENSMUSG00000021273.12	ENSMUST00000238526.2	3048	7	-32	1253	-32	-1250	multi-exon	FALSE	canonical	3	727	junction_5	64.1242283904194	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCCTTGTCTTTCTCAT	2850	False	NA	-34	True	AATAGA	-13	NA	63402406	63383851	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007_63394200_63396466_63396596_63400750_63400935_63401980
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053154	chr14	+	1021	1	Intergenic	novelGene_1681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGTCCATGTTAACCT	NA	False	NA	NA	False	AATATA	-42	NA	63744595	63745616	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_63744600_63745600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053160	chr14	+	213	1	Intergenic	novelGene_1682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGGCCTTGTTGAGTAG	568	False	NA	NA	False	NA	NA	NA	63748888	63749101	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_63748900_63749100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053193	chr14	-	180	1	Intergenic	novelGene_1683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACATCACCACCAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	64869049	64868869	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_64868900_64869000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053219	chr14	-	3407	11	FSM	ENSMUSG00000021972.15	ENSMUST00000022544.14	3396	11	-12	1	-6	-1	multi-exon	FALSE	canonical	3	23	junction_3	9.87167665596883	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGGCTGTCCGGGATTTC	7673	False	NA	NA	False	AATAAA	-13	NA	65187311	65049049	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_65050869_65054465_65054586_65063049_65063145_65064220_65064317_65066034_65066118_65089333_65089488_65098964_65099076_65125023_65125110_65134098_65134576_65140687_65140768_65187025
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053238	chr14	-	5946	7	NIC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	-35	1	combination_of_known_junctions	FALSE	canonical	3	28	junction_6	49.9355139710763	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTTGGAGGTGTTTTGT	NA	False	NA	-2	True	NA	NA	NA	65387339	65289510	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65317828_65317925_65387258
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053260	chr14	+	219	1	Intergenic	novelGene_1684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAGGACCCAGGGACAA	NA	False	NA	NA	False	NA	NA	NA	65340670	65340889	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_65340700_65340900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053276	chr14	-	2866	15	FSM	ENSMUSG00000022031.7	ENSMUST00000022609.7	2851	15	-13	-2	-13	2	multi-exon	FALSE	canonical	3	390	junction_14	46.0192949772602	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTCGTGTGGTGCTTTTT	3431	False	NA	NA	False	AATAAA	-18	NA	65830537	65767895	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_65769050_65784582_65784665_65785314_65785543_65786868_65786935_65788833_65788925_65797569_65797764_65800700_65800828_65802760_65802923_65815373_65815529_65818196_65818266_65819563_65819628_65820338_65820410_65823706_65823846_65827954_65828055_65830373
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053282	chr14	-	2809	15	FSM	ENSMUSG00000022031.7	ENSMUST00000225355.2	2771	15	-36	-2	-13	2	multi-exon	FALSE	canonical	3	153	junction_14	90.9467493893531	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTCGTGTGGTGCTTTTT	3431	False	NA	NA	False	AATAAA	-18	NA	65830537	65767895	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_65769050_65784582_65784665_65785314_65785543_65786868_65786935_65788833_65788925_65797569_65797764_65800700_65800828_65802760_65802923_65815373_65815529_65818196_65818266_65819563_65819628_65820338_65820410_65823706_65823846_65827954_65828055_65830430
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053302	chr14	+	3793	9	FSM	ENSMUSG00000022032.15	ENSMUST00000022610.15	3794	9	0	1	0	-1	multi-exon	FALSE	canonical	3	27	junction_2	7.61474720525902	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGCTGATAAGTGGTCC	818	False	NA	NA	False	AATAAA	-18	NA	65903851	66002274	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_65904196_65908005_65908124_65927216_65927346_65967969_65968645_65975872_65975954_65977738_65977838_65979580_65979629_65997033_65997229_66000170
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053318	chr14	+	1493	8	NIC	ENSMUSG00000022033.10	novel	451	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_1	250.309767272148	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGCATTATCTGTTTTT	NA	False	NA	25	True	AATAAA	-41	NA	66043680	66055271	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_+_66043752_66046663_66046739_66049379_66049474_66050414_66050558_66051255_66051426_66052620_66052751_66054048_66054226_66054638
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053322	chr14	+	196	1	Intergenic	novelGene_1685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTACAAAGGGGGCCAG	3837	False	NA	NA	False	NA	NA	NA	66048801	66048997	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_66048800_66049000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053331	chr14	-	3447	11	FSM	ENSMUSG00000022034.11	ENSMUST00000022613.10	2913	11	27	-561	27	561	multi-exon	FALSE	canonical	3	933	junction_8	61.5078043828586	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGTACTGGTTTATTGT	6371	False	NA	0	True	NA	NA	NA	66071416	66055925	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053338	chr14	-	3394	10	NIC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-11	0	intron_retention	FALSE	canonical	3	933	junction_7	64.172991511275	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTCAGTGGCTTG	6419	False	NA	-11	True	ATTAAA	-14	NA	66071368	66056486	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064738_66065917_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053358	chr14	-	187	1	Intergenic	novelGene_1686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAAACTGTTCCCCAGTA	9573	False	NA	NA	False	NA	NA	NA	66270047	66269860	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_66269900_66270000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053367	chr14	-	2101	19	FSM	ENSMUSG00000022040.9	ENSMUST00000070515.2	2035	19	-62	-4	-62	1	multi-exon	FALSE	canonical	3	171	junction_15	18.7001188350354	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTGTGTTCTTGAGAA	NA	False	NA	-1	True	AATAAA	-20	NA	66362011	66321821	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_66322210_66322379_66322439_66322744_66322826_66323682_66323753_66324413_66324517_66325748_66325783_66326954_66327030_66330247_66330360_66332186_66332273_66333134_66333162_66336252_66336288_66339041_66339121_66339595_66339692_66341174_66341244_66344662_66344786_66345425_66345617_66347564_66347725_66354159_66354245_66361783
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053373	chr14	+	3687	6	FSM	ENSMUSG00000022043.20	ENSMUST00000022623.13	3678	6	-9	0	-9	0	multi-exon	FALSE	canonical	3	340	junction_4	10.4957134107215	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGTTTTTTATTGTC	NA	False	NA	31	True	NA	NA	NA	66534470	66548873	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_66534999_66540629_66540726_66541453_66541685_66544474_66544498_66545260_66545380_66546183
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053382	chr14	+	1088	1	FSM	ENSMUSG00000022043.20	ENSMUST00000223737.2	1057	1	-11	-20	-11	20	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGACATTTTCGATAACA	NA	False	NA	NA	False	AAAAAG	-36	NA	66534503	66535591	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_66534500_66535600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053398	chr14	-	3246	6	FSM	ENSMUSG00000022051.16	ENSMUST00000022634.9	3238	6	-8	0	-8	0	multi-exon	FALSE	canonical	3	675	junction_1	44.8508639827596	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTCCATATATCATTTT	NA	False	NA	-12	True	ATTAAA	-16	NA	67246334	67222687	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_67225225_67226583_67226734_67226854_67226959_67231325_67231399_67236969_67237154_67246136
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053403	chr14	+	2702	1	Intergenic	novelGene_1687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACTTGGAAGAATCAATAA	3478	False	NA	NA	False	NA	NA	NA	67241204	67243906	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_67241200_67243900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053409	chr14	-	3867	10	FSM	ENSMUSG00000022052.10	ENSMUST00000089230.7	4010	10	-26	169	-26	-169	multi-exon	FALSE	canonical	3	602	junction_4	68.1900032498157	529	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGTCAACTTGATTGT	NA	False	NA	NA	False	AATAAA	-15	NA	67309919	67251673	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67307683_67307759_67309538
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053430	chr14	-	178	1	Intergenic	novelGene_1688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAATAAAGGCTATG	NA	False	NA	NA	False	NA	NA	NA	67603820	67603642	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_67603600_67603800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053436	chr14	-	6820	15	FSM	ENSMUSG00000093726.2_ENSMUSG00000048922.19	ENSMUST00000163100.8	3841	15	199	-3178	-36	0	multi-exon	FALSE	canonical	0	0	junction_2	110.056131318597	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCCTGTGTCTGGGCCTT	NA	False	NA	-2	True	NA	NA	NA	67952860	67910625	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053467	chr14	+	3583	1	Antisense	novelGene_ENSMUSG00000048922.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	67938386	67941969	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr14_+_67938400_67942000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053496	chr14	+	3422	4	FSM	ENSMUSG00000022055.8	ENSMUST00000022639.8	3380	4	-47	5	-47	-5	multi-exon	FALSE	canonical	3	158	junction_3	13.589211407093	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGGGTGTGCAGTCTT	NA	False	NA	7	True	AATAAA	-21	NA	68321264	68326539	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_68322459_68323422_68323548_68323935_68324256_68324756
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053503	chr14	-	186	1	Intergenic	novelGene_1689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAAGGTCACTAATTAG	NA	False	NA	NA	False	NA	NA	NA	68327262	68327076	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_68327100_68327300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053513	chr14	-	3074	3	FSM	ENSMUSG00000022054.12	ENSMUST00000022638.6	3334	3	-2	262	-2	-262	multi-exon	FALSE	canonical	3	13	junction_2	6.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAATGTGTGGTGATGTG	NA	False	NA	-3	True	AATAAA	-20	NA	68362297	68356993	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_68358834_68360269_68360395_68361188
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053518	chr14	+	193	1	Intergenic	novelGene_1690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACTTAACGGAGAATTCG	NA	False	NA	NA	False	NA	NA	NA	68574567	68574760	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_68574600_68574800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053528	chr14	-	1814	3	ISM	ENSMUSG00000034248.8	ENSMUST00000184914.2	2212	4	35706	-199	35706	199	3prime_fragment	FALSE	canonical	3	36	junction_2	85	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAGTCCTCAGCACCATG	892	False	NA	NA	False	NA	NA	NA	69486710	69481425	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr14_-_69482804_69485029_69485087_69486331
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053533	chr14	-	3758	3	FSM	ENSMUSG00000034248.8	ENSMUST00000184497.2	5927	3	42	2127	42	198	multi-exon	FALSE	canonical	3	50	junction_2	78	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTACAGTCCTCAGCACCAT	584	False	NA	NA	False	NA	NA	NA	69522519	69481426	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_69482804_69485029_69487072_69522180
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053548	chr14	-	1666	3	NNC	ENSMUSG00000034248.8	novel	2212	4	NA	NA	35706	195	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	95	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGTACAGTCCTCAGCAC	892	False	NA	NA	False	NA	NA	NA	69486710	69481429	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr14_-_69482804_69485029_69485087_69486475
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053557	chr14	+	3008	13	NNC	ENSMUSG00000095463.9	novel	3589	13	NA	NA	-23	474	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_8	28.7096334974091	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGACATTTTAAACAGAAA	7278	False	NA	NA	False	AATAAA	-20	NA	69574599	69604139	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr14_+_69574738_69584934_69585044_69586521_69586720_69588151_69588358_69591850_69592002_69592842_69592947_69594161_69594222_69594443_69594575_69596270_69596438_69599087_69599413_69601016_69601103_69601771_69601934_69602968
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053558	chr14	+	3032	13	FSM	ENSMUSG00000095463.9	ENSMUST00000184973.8	3589	13	-23	580	-23	474	multi-exon	FALSE	canonical	3	82	junction_8	36.1504379872038	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGACATTTTAAACAGAAA	7278	False	NA	NA	False	AATAAA	-20	NA	69574599	69604139	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_69574738_69584934_69585044_69586521_69586720_69588151_69588358_69591850_69592002_69592842_69592947_69594161_69594222_69594443_69594599_69596270_69596438_69599087_69599413_69601016_69601103_69601771_69601934_69602968
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053582	chr14	+	3008	13	NNC	ENSMUSG00000022066.17	novel	3589	13	NA	NA	-23	474	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_8	28.7614711414806	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGACATTTTAAACAGAAA	NA	False	NA	NA	False	AATAAA	-20	NA	69792849	69822389	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr14_+_69792988_69803184_69803294_69804771_69804970_69806401_69806608_69810100_69810252_69811092_69811197_69812411_69812472_69812693_69812825_69814520_69814688_69817337_69817663_69819266_69819353_69820021_69820184_69821218
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053599	chr14	-	2006	7	FSM	ENSMUSG00000034194.19	ENSMUST00000121142.4	1958	7	-43	-5	17	4	multi-exon	FALSE	canonical	3	174	junction_3	17.7333646616265	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGCGTCCAAGTGCGGT	NA	False	NA	-2	True	AATAAA	-19	NA	69944985	69934751	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_69935052_69936032_69936129_69937408_69937480_69941402_69941576_69942582_69943328_69943995_69944134_69944502
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053623	chr14	-	2715	10	FSM	ENSMUSG00000034190.10	ENSMUST00000036381.10	2649	10	-64	-2	-57	2	multi-exon	FALSE	canonical	3	245	junction_7	17.0583602471336	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGTTGTCTATTCTT	NA	False	NA	0	True	ATTAAA	-17	NA	69970047	69954446	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_69955750_69955963_69956147_69956577_69956639_69956847_69956947_69957196_69957317_69957560_69957610_69958376_69958511_69958655_69958842_69967571_69967744_69969639
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053635	chr14	+	1525	9	FSM	ENSMUSG00000022089.10	ENSMUST00000022680.9	1767	9	0	242	0	-242	multi-exon	FALSE	canonical	3	54	junction_3	8.98523093748847	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTACTTTAACTGACAC	NA	False	NA	NA	False	AGTAAA	-18	NA	70337553	70375413	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_70337646_70356052_70356102_70361289_70361331_70361631_70361694_70366298_70366436_70366966_70367008_70371898_70372041_70372184_70372320_70374587
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053654	chr14	-	3754	21	FSM	ENSMUSG00000033712.7	ENSMUST00000035612.7	3725	21	-29	0	-29	0	multi-exon	TRUE	canonical	0	0	junction_8	38.4373191052654	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGTGAGTCTTTGTAG	NA	False	NA	44	True	AATAAA	-18	NA	70391289	70375616	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70378462_70379059_70379297_70379391_70379620_70379808_70379981_70380373_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70391075
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053659	chr14	+	192	1	Intergenic	novelGene_1691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAGGCCAGCCCAGA	NA	False	NA	NA	False	NA	NA	NA	70406374	70406566	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_70406400_70406600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053661	chr14	+	203	1	Intergenic	novelGene_1692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCGGGCAGTGGTGGTGC	NA	False	NA	NA	False	NA	NA	NA	70409644	70409847	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_70409600_70409800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053670	chr14	+	194	1	Intergenic	novelGene_1693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTATAGGTCTCATTAAGAA	NA	False	NA	NA	False	NA	NA	NA	70427585	70427779	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_70427600_70427800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053684	chr14	-	4869	23	NIC	ENSMUSG00000033644.6	novel	4916	23	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_14	9.98511288563344	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGTCTGAGAGAATATT	NA	False	NA	-14	True	AATAAA	-18	NA	70666875	70609925	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_-_70611886_70613387_70613496_70614111_70614366_70627340_70627447_70627976_70628066_70628812_70628930_70629927_70630030_70631459_70631649_70632776_70632891_70635592_70635734_70637183_70637274_70638866_70638952_70639482_70639672_70646359_70646474_70646753_70646835_70647830_70647956_70648582_70648701_70658088_70658200_70658897_70659105_70660076_70660216_70660343_70660432_70663955_70664193_70666770
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053690	chr14	-	2046	9	FSM	ENSMUSG00000000776.14	ENSMUST00000000793.13	2016	9	-24	-6	-24	6	multi-exon	FALSE	canonical	3	137	junction_3	16.2244992218558	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGGTTCTGCTCACATC	1707	False	NA	-1	True	AATAAA	-23	NA	70680911	70676190	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_70677019_70677157_70677311_70677453_70677720_70678038_70678208_70678476_70678602_70678743_70678896_70679791_70679836_70680390_70680561_70680772
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053694	chr14	-	1993	8	FSM	ENSMUSG00000000776.14	ENSMUST00000180358.3	2032	8	83	-44	83	5	multi-exon	FALSE	canonical	3	137	junction_3	15.9910689359494	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGGTTCTGCTCACAT	1971	False	NA	-2	True	AATAAA	-22	NA	70680647	70676191	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_70677019_70677157_70677311_70677453_70677720_70678038_70678208_70678476_70678602_70678743_70678896_70679791_70679836_70680390
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053710	chr14	+	1609	8	FSM	ENSMUSG00000033589.5	ENSMUST00000047218.5	1565	8	-42	-2	-42	2	multi-exon	FALSE	canonical	3	225	junction_3	37.0515360886781	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTCTTCACATCTCAT	6525	False	NA	32	True	AATAAA	-28	NA	70782751	70786375	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_70783179_70783916_70783990_70784369_70784447_70784554_70784676_70785106_70785221_70785379_70785516_70785624_70785780_70785869
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053729	chr14	+	223	1	Intergenic	novelGene_1694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	388	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTACAGCTGTCTAGGAAC	NA	False	NA	NA	False	AATATA	-25	NA	70998292	70998515	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_70998300_70998500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053739	chr14	-	6157	26	FSM	ENSMUSG00000033487.15	ENSMUST00000089017.12	6143	26	-14	0	-14	0	multi-exon	FALSE	canonical	3	104	junction_25	24.1979833870511	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTTTTGTATTTATAA	NA	False	NA	-1	True	AATAAA	-24	NA	72947457	72775385	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947157
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053757	chr14	+	2168	15	NIC	ENSMUSG00000022106.15	novel	3573	16	NA	NA	-26	7	combination_of_known_junctions	FALSE	canonical	3	22	junction_9	6.89720440261332	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATTGACGAACAACTTCT	NA	False	NA	NA	False	NA	NA	NA	73380405	73420129	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_+_73380629_73388972_73389056_73391754_73391849_73392270_73392335_73399379_73399536_73399766_73399918_73402123_73402291_73403919_73404079_73404204_73404313_73405429_73405573_73411162_73411354_73411829_73411957_73414434_73414575_73415872_73416004_73419898
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053772	chr14	+	177	1	Intergenic	novelGene_1695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATGCTTAATCTTG	1946	False	NA	NA	False	NA	NA	NA	73511980	73512157	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_73512000_73512200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053782	chr14	-	1811	6	FSM	ENSMUSG00000022108.9	ENSMUST00000022704.9	1796	6	-17	2	-17	-2	multi-exon	FALSE	canonical	3	633	junction_1	88.6128658830082	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTCTTGTGGATGCTGTT	NA	False	NA	NA	False	AATAAA	-24	NA	73622746	73599667	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_73600584_73601981_73602133_73603191_73603303_73603760_73603968_73605738_73605868_73622449
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053787	chr14	+	196	1	Intergenic	novelGene_1696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	612	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTAAAAAAAAAGGTAGAGA	NA	False	NA	NA	False	NA	NA	NA	73681853	73682049	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_73681900_73682000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053796	chr14	+	1637	7	FSM	ENSMUSG00000022109.7	ENSMUST00000022705.7	1328	7	-5	-304	-5	0	multi-exon	FALSE	canonical	3	317	junction_6	14.7356333046425	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTCACAATTAAGTCTCT	NA	False	NA	NA	False	AATAAA	-17	NA	73747459	73756289	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_73747626_73748594_73748662_73751244_73751416_73752729_73752788_73754075_73754163_73754646_73754779_73755333
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053815	chr14	+	2131	11	FSM	ENSMUSG00000022110.14	ENSMUST00000160507.8	2229	11	100	-2	-1	2	multi-exon	FALSE	canonical	3	1524	junction_2	74.4957045741565	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGTTATGGGTTTTTT	NA	False	NA	13	True	AATAAA	-16	NA	73790204	73833584	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053822	chr14	+	1435	10	NIC	ENSMUSG00000022110.14	novel	2229	11	NA	NA	17	-136	combination_of_known_splicesites	FALSE	canonical	3	74	junction_1	503.772435397836	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACGGTGGTCTCTTTTCT	NA	False	NA	14	True	TATAAA	-17	NA	73790222	73833087	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_+_73790338_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053830	chr14	+	1529	12	NNC	ENSMUSG00000022110.14	novel	1545	12	NA	NA	32	5	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_11	472.438355767184	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTATTCTTTAGTATAAA	NA	False	NA	NA	False	AATAAA	-18	NA	73790237	73833228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813_73832900_73833112
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053832	chr14	+	1162	8	NNC	ENSMUSG00000022110.14	novel	435	2	NA	NA	7019	-132	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	572.614982660554	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGGTCTCTTTTCTTGCA	NA	False	NA	18	True	TATAAA	-21	NA	73813112	73833091	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr14_+_73813214_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053837	chr14	+	1086	9	FSM	ENSMUSG00000021996.17	ENSMUST00000022573.17	1988	9	-5	907	-5	10	multi-exon	FALSE	canonical	3	1089	junction_1	102.16133074701	293	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTATTTTACCACCATTC	NA	False	NA	23	True	AATAAA	-24	NA	74969731	74987298	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_74969829_74973399_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983158_74987084
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053856	chr14	-	4623	19	FSM	ENSMUSG00000068015.9	ENSMUST00000228252.2	3125	19	-1	-1497	-1	-1	multi-exon	FALSE	canonical	3	67	junction_17	17.7194355175815	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTTTGGATTGATTGAC	568	False	NA	-2	True	ATTAAA	-19	NA	75185317	74992115	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053869	chr14	+	6158	19	NIC	ENSMUSG00000022000.12	novel	6151	19	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_1	26.5676402070797	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTGTAGATTTTCCTT	NA	False	NA	14	True	AATAAA	-15	NA	75521808	75581866	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_+_75522106_75529008_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573364_75573515_75574809_75575011_75576748_75576913_75581033
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053887	chr14	-	4293	23	FSM	ENSMUSG00000034893.10	ENSMUST00000049168.9	4268	23	-6	-19	-6	-1	multi-exon	FALSE	canonical	3	97	junction_8	10.1293289898751	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGCCACGTGTTTGT	NA	False	NA	NA	False	AATAAA	-37	NA	75992004	75939790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780_75979947_75981005_75981068_75984492_75984640_75991704
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053897	chr14	-	3591	10	FSM	ENSMUSG00000022003.8	ENSMUST00000022580.8	3588	10	0	-3	0	3	multi-exon	FALSE	canonical	3	23	junction_9	8.56348838577675	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTTACAGTCATTTTG	NA	False	NA	NA	False	AATAAA	-20	NA	76024477	75997553	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_76000131_76000768_76000850_76004342_76004482_76006255_76006381_76007005_76007102_76007610_76007697_76008878_76008974_76012434_76012583_76014435_76014567_76024364
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053907	chr14	+	112	1	Intergenic	novelGene_1697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAAATACATTTCCTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	76040529	76040641	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_76040500_76040600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053915	chr14	-	199	1	Intergenic	novelGene_1698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCTGGGCGTGGTGACA	3076	False	NA	NA	False	NA	NA	NA	76047129	76046930	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_76046900_76047100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053922	chr14	+	175	1	Intergenic	novelGene_1699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTCTGGTTTTTCGAGA	NA	False	NA	NA	False	NA	NA	NA	76068555	76068730	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_76068600_76068700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053931	chr14	+	911	6	FSM	ENSMUSG00000060126.15	ENSMUST00000110894.9	1169	6	146	112	-63	6	multi-exon	FALSE	canonical	3	5160	junction_2	168.161113221815	537	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTCTTTGCTGTGATTGT	984	False	NA	10	True	AATAAA	-21	NA	76082678	76085743	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_76082897_76083056_76083131_76083642_76083834_76084133_76084240_76084683_76084801_76085538
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053937	chr14	+	184	1	Intergenic	novelGene_1700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAAAAATGTGTTT	NA	False	NA	NA	False	NA	NA	NA	76097988	76098172	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_76098000_76098200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053954	chr14	-	175	1	Intergenic	novelGene_1701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGCGTTTATAAGA	NA	False	NA	NA	False	NA	NA	NA	76185922	76185747	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_76185700_76185900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053959	chr14	-	150	1	Intergenic	novelGene_1702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGCATAGAGTCAATGCA	NA	False	NA	NA	False	NA	NA	NA	76279401	76279251	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_76279300_76279400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053965	chr14	-	5456	8	FSM	ENSMUSG00000022008.5	ENSMUST00000022585.5	5389	8	-66	-1	-66	1	multi-exon	FALSE	canonical	3	101	junction_3	16.688013540214	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTGGAATCTTCCTTTT	NA	False	NA	-8	True	AATAAA	-18	NA	76348266	76323674	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_76328187_76332446_76332546_76335893_76336059_76336499_76336632_76339885_76339992_76343493_76343593_76344760_76344894_76348056
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053969	chr14	+	1699	10	FSM	ENSMUSG00000022009.2	ENSMUST00000022586.2	3974	10	-15	2290	-15	-2290	multi-exon	FALSE	canonical	3	441	junction_7	36.4295362461713	225	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTCTGTGTCATTGG	NA	False	NA	27	True	AATAAA	-23	NA	76348315	76372529	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_76348767_76349363_76349438_76351614_76351714_76352417_76352481_76353223_76353301_76361925_76362019_76363577_76363772_76368252_76368370_76370411_76370639_76372225
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053985	chr14	+	187	1	Intergenic	novelGene_1703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCAGGATCAGTCAATTC	NA	False	NA	NA	False	NA	NA	NA	76375687	76375874	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_76375700_76375900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000053996	chr14	+	1732	3	FSM	ENSMUSG00000022010.20	ENSMUST00000022587.10	1762	3	32	-2	-20	2	multi-exon	FALSE	canonical	3	2255	junction_1	40	487	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTTTCTATATGACGCCA	6571	False	NA	33	True	AATAAA	-23	NA	76741949	76745207	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_76742282_76742688_76742738_76743856
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054017	chr14	-	206	1	Intergenic	novelGene_1704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	77229698	77229492	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_77229500_77229700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054030	chr14	-	179	1	Intergenic	novelGene_1705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATTGAGTCTTTAG	NA	False	NA	NA	False	NA	NA	NA	77775973	77775794	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_77775800_77776000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054055	chr14	+	3473	26	FSM	ENSMUSG00000058997.9	ENSMUST00000227255.2	3406	26	-62	-5	0	5	multi-exon	FALSE	canonical	2	39	junction_16	9.45524193238862	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCGTCCTTTTGTTGAA	9346	False	NA	8	True	AATAAA	-24	NA	79086631	79302713	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_79086884_79106218_79106297_79145562_79145694_79149608_79149720_79162701_79162870_79171105_79171271_79172033_79172084_79172622_79172732_79174544_79174650_79184580_79184713_79186723_79186859_79186939_79187018_79219675_79219837_79221628_79221743_79231839_79232009_79232525_79232604_79246603_79246720_79256046_79256154_79258019_79258127_79263445_79263518_79275564_79275642_79294086_79294163_79296112_79296249_79297968_79298089_79299923_79300130_79302293
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054064	chr14	-	922	5	FSM	ENSMUSG00000022018.8	ENSMUST00000022595.8	918	5	10	-14	10	14	multi-exon	FALSE	canonical	3	129	junction_2	11.7046999107196	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTTATTTCCGTCAGT	NA	False	NA	3	True	AATAAA	-28	NA	79539075	79526181	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_79526560_79527683_79527747_79529110_79529219_79538154_79538341_79538888
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054076	chr14	+	150	1	Antisense	novelGene_ENSMUSG00000022020.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATATTCAGTCCAACTTC	NA	False	NA	NA	False	TTTAAA	-3	NA	79570029	79570179	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr14_+_79570000_79570200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054079	chr14	-	3990	20	FSM	ENSMUSG00000022020.16	ENSMUST00000022597.15	13223	20	-2	9235	-2	-300	multi-exon	FALSE	canonical	3	151	junction_14	26.2237337258888	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTTTATATCTTTTATT	NA	False	NA	-15	True	AATAAA	-18	NA	79628220	79571943	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054093	chr14	-	181	1	Intergenic	novelGene_1706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTCATTCTCCTAGAATT	NA	False	NA	NA	False	NA	NA	NA	79625935	79625754	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_79625800_79625900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054105	chr14	+	178	1	Intergenic	novelGene_1707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAGTCTCTTTCTGCA	NA	False	NA	NA	False	NA	NA	NA	79632549	79632727	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_79632500_79632700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054122	chr14	-	197	1	Intergenic	novelGene_1708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGCATCTCCTCTCT	9711	False	NA	NA	False	NA	NA	NA	79652449	79652252	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_79652300_79652400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054139	chr14	+	207	1	Intergenic	novelGene_1709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATGCTGATGGTCATGG	7699	False	NA	NA	False	NA	NA	NA	79712006	79712213	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_79712000_79712200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054143	chr14	+	4236	9	FSM	ENSMUSG00000036461.17	ENSMUST00000040131.13	4235	9	-19	18	-19	-18	multi-exon	FALSE	canonical	3	19	junction_5	6.51440711039769	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGTTTTCAAGCAAATA	NA	False	NA	NA	False	ATTAAA	-21	NA	79718614	79819916	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_79719078_79773562_79773863_79798186_79798368_79802901_79803013_79804589_79804755_79806660_79806745_79808162_79808356_79810611_79811059_79817624
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054148	chr14	+	214	1	Intergenic	novelGene_1710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTCTGTTCTTTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	79729921	79730135	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_79729900_79730100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054170	chr14	+	184	1	Intergenic	novelGene_1711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGATCTGCACTAAATAAGA	NA	False	NA	NA	False	NA	NA	NA	81881951	81882135	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_81882000_81882100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054179	chr14	+	95	1	Intergenic	novelGene_1712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAAATCAAGTATCCATA	NA	False	NA	NA	False	NA	NA	NA	85020280	85020375	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_85020300_85020400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054184	chr14	+	196	1	Intergenic	novelGene_1713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATCCAATAAAAACACCAA	NA	False	NA	NA	False	NA	NA	NA	85998119	85998315	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_85998100_85998300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054189	chr14	-	188	1	Genic_Genomic	ENSMUSG00000115664.2	novel	NA	NA	NA	NA	6033	78	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATTTTAGAGTTCATTT	NA	False	NA	NA	False	NA	NA	NA	86640502	86640314	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr14_-_86640300_86640500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054200	chr14	+	197	1	Intergenic	novelGene_1714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATGGTCTATTTAATAAC	NA	False	NA	NA	False	NA	NA	NA	87652435	87652632	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_87652400_87652600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054220	chr14	+	2657	14	FSM	ENSMUSG00000022019.17	ENSMUST00000168275.9	2657	14	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_12	16.6232175269033	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTCTGGTTCACTTGTC	NA	False	NA	7	True	AATAAA	-21	NA	87654074	87782940	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_87654285_87694469_87694555_87696192_87696259_87709511_87709673_87712134_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724597_87724724_87743194_87744043_87749080_87749207_87776832_87776958_87782692
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054224	chr14	+	191	1	Intergenic	novelGene_1715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAGACTGGACAGGC	NA	False	NA	NA	False	NA	NA	NA	87716721	87716912	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_87716700_87716900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054227	chr14	+	221	1	Intergenic	novelGene_1716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACTCCACATAAAACCAG	NA	False	NA	NA	False	NA	NA	NA	91639243	91639464	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_91639200_91639500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054237	chr14	-	197	1	Intergenic	novelGene_1717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGGCATAAACTTTGAAAG	NA	False	NA	NA	False	NA	NA	NA	93969518	93969321	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_93969300_93969500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054243	chr14	+	187	1	Intergenic	novelGene_1718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGTCAGAAAGTCTATAA	NA	False	NA	NA	False	NA	NA	NA	94554691	94554878	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_94554700_94554900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054246	chr14	+	183	1	Intergenic	novelGene_1719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACTACAGCTTGAATTG	NA	False	NA	NA	False	NA	NA	NA	95788880	95789063	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_95788900_95789100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054252	chr14	-	179	1	Intergenic	novelGene_1720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGAAAGCAACATG	NA	False	NA	NA	False	NA	NA	NA	96425471	96425292	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_96425300_96425500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054266	chr14	+	213	1	Intergenic	novelGene_1721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCTCCGGCATAGAAAAC	6767	False	NA	NA	False	NA	NA	NA	99232936	99233149	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_99232900_99233100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054299	chr14	-	5160	21	FSM	ENSMUSG00000033166.12	ENSMUST00000042471.11	5150	21	-10	0	-10	0	multi-exon	FALSE	canonical	3	393	junction_13	28.371596712205	237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCATCTATGCTGAATGT	2517	False	NA	NA	False	NA	NA	NA	99337216	99312641	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054319	chr14	+	4342	16	ISM	ENSMUSG00000022064.11	ENSMUST00000022650.9	2797	18	-7	30808	-7	7	5prime_fragment	FALSE	canonical	2	66	junction_8	17.8940089291236	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTCAACTCTGTGGGAA	NA	False	NA	NA	False	AATAAA	-23	NA	99337335	99461121	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734_99344934_99350405_99350526_99370671_99370806_99373888_99373998_99374477_99374660_99377972_99378099_99388078_99388178_99416750_99416917_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458994
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054329	chr14	+	171	1	Intergenic	novelGene_1722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCTCAATTATGAAGAAGT	6429	False	NA	NA	False	NA	NA	NA	99345586	99345757	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_99345600_99345800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054332	chr14	+	204	1	Intergenic	novelGene_1723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCTTGTGAATGCTCCA	NA	False	NA	NA	False	NA	NA	NA	99408850	99409054	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_99408800_99409100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054341	chr14	-	177	1	Intergenic	novelGene_1724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATAAAAAGAAGAATTTT	NA	False	NA	NA	False	NA	NA	NA	99456645	99456468	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_99456500_99456600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054345	chr14	+	3401	4	FSM	ENSMUSG00000005148.9	ENSMUST00000005279.8	3352	4	-48	-1	-48	1	multi-exon	FALSE	canonical	3	3464	junction_1	114.952163963972	2391	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGCCTTCTTGACCCT	NA	False	NA	23	True	AATAAA	-19	NA	99536078	99552473	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_99536659_99538816_99539691_99540853_99540914_99550586
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054372	chr14	-	185	1	Intergenic	novelGene_1725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGAGTGCCTTGGGCA	NA	False	NA	NA	False	NA	NA	NA	99607699	99607514	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_99607500_99607700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054378	chr14	+	184	1	Intergenic	novelGene_1726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGATATGAAATTAATA	NA	False	NA	NA	False	NA	NA	NA	99792524	99792708	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_99792500_99792700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054389	chr14	+	190	1	Intergenic	novelGene_1727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	257	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACACCCTGAGAAAACACAT	NA	False	NA	NA	False	NA	NA	NA	101857569	101857759	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_101857600_101857800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054397	chr14	-	1628	3	NNC	ENSMUSG00000075486.11	novel	519	3	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	218.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGTGGTGAGCTGACAG	NA	False	NA	1	True	NA	NA	NA	101877882	101870415	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr14_-_101871829_101874389_101874543_101877820
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054421	chr14	+	919	9	FSM	ENSMUSG00000022111.10	ENSMUST00000002289.8	903	9	-16	0	11	0	multi-exon	FALSE	canonical	3	3225	junction_5	471.372729376658	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTGTTTTTGCTAC	101	False	NA	22	True	AATAAA	-18	NA	101891413	101933561	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_101891542_101891643_101891656_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101928007_101928084_101932594_101932654_101933337
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054424	chr14	+	1189	5	ISM	ENSMUSG00000022111.10	ENSMUST00000002289.8	903	9	-8	28363	-8	-60	5prime_fragment	FALSE	canonical	3	4015	junction_1	248.252895249985	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTCTCGTTTTCACTA	109	False	NA	NA	False	AGTAAA	-19	NA	101891421	101905198	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr14_+_101891542_101891643_101891656_101903196_101903326_101903947_101904105_101904427
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054438	chr14	-	296	1	Intergenic	novelGene_1728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGGTAATTGTTATAGATA	NA	False	NA	NA	False	NA	NA	NA	101908376	101908080	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_101908100_101908400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054455	chr14	+	2376	4	FSM	ENSMUSG00000022125.8	ENSMUST00000022721.8	2445	4	70	-1	70	1	multi-exon	FALSE	canonical	3	248	junction_2	4.96655480858378	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGCATCTTGTATCTTT	NA	False	NA	7	True	NA	NA	NA	103307721	103315065	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_103307904_103309069_103309236_103310622_103310849_103313263
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054464	chr14	-	3528	5	FSM	ENSMUSG00000022124.16	ENSMUST00000022720.15	4309	5	-12	793	0	2	multi-exon	FALSE	canonical	3	60	junction_4	52.2894587847302	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGTATTTTTATAACTT	9801	False	NA	-2	True	AATAAA	-15	NA	103337002	103318467	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628_103332978_103336597
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054468	chr14	-	3406	5	FSM	ENSMUSG00000022124.16	ENSMUST00000145693.8	3352	5	-52	-2	-52	2	multi-exon	FALSE	canonical	3	110	junction_4	32.5451609306207	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGTATTTTTATAACTT	9870	False	NA	-2	True	AATAAA	-15	NA	103336487	103318467	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628_103332978_103336204
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054498	chr14	+	2877	7	FSM	ENSMUSG00000055717.14	ENSMUST00000069443.14	2863	7	-14	0	-14	0	multi-exon	FALSE	canonical	3	39	junction_2	8.46069343099804	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAGCTCACGCATGAATG	NA	False	NA	27	True	AATAAA	-17	NA	103887649	103942343	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_103888345_103894368_103894509_103923104_103923255_103925497_103925840_103932603_103932760_103939952_103940275_103941271
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054504	chr14	-	176	1	Intergenic	novelGene_1729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATGGATATTTGGA	NA	False	NA	NA	False	NA	NA	NA	103916547	103916371	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_103916400_103916500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054514	chr14	-	3462	6	FSM	ENSMUSG00000022120.5	ENSMUST00000022716.4	3420	6	-40	-2	-27	2	multi-exon	FALSE	canonical	3	75	junction_2	11.8490505948789	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTGATGTCATCATGG	NA	False	NA	1	True	AATAAA	-20	NA	104760108	104714969	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_104717734_104740782_104740872_104743528_104743778_104745374_104745467_104747737_104747874_104759976
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054559	chr14	+	2131	8	FSM	ENSMUSG00000053253.17	ENSMUST00000138283.2	1695	8	-9	-427	-9	0	multi-exon	TRUE	canonical	3	137	junction_7	99.9552961302691	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGTATTTCTTGTATT	NA	False	NA	10	True	AATAAA	-17	NA	105496178	105546732	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545549
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054569	chr14	+	404	1	FSM	ENSMUSG00000060143.8	ENSMUST00000073238.7	384	1	0	-20	0	20	mono-exon	FALSE	NA	NA	NA	NA	NA	844	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGCAAGCATGCAGACA	NA	False	NA	NA	False	AATAAA	-41	NA	105919261	105919665	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_105919300_105919700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054578	chr14	-	2394	2	FSM	ENSMUSG00000022114.6	ENSMUST00000022709.6	2087	2	-307	0	-307	0	multi-exon	FALSE	canonical	3	119	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCTTGTTTTGTCTTA	NA	False	NA	-4	True	TATAAA	-30	NA	106134560	106129380	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_106131236_106134021
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054585	chr14	+	126	1	Intergenic	novelGene_1730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAAGTGTTTGATGT	NA	False	NA	NA	False	NA	NA	NA	106163539	106163665	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_106163500_106163700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054590	chr14	-	5257	1	Intergenic	novelGene_1731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTGGCTACATTTCTT	NA	False	NA	NA	False	NA	NA	NA	112608923	112603666	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_112603700_112608900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054602	chr14	+	2130	1	FSM	ENSMUSG00000058126.8	ENSMUST00000072359.8	2147	1	0	17	0	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	280	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGTCAAGAAGAAGATGT	NA	False	NA	NA	False	AATAAA	-45	NA	113552039	113554169	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_113552000_113554200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054609	chr14	+	180	1	Intergenic	novelGene_1732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAATCAGTAATAAAC	NA	False	NA	NA	False	NA	NA	NA	114902956	114903136	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_114903000_114903100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054622	chr14	+	189	1	Intergenic	novelGene_1733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAACAGAGGGCAAG	NA	False	NA	NA	False	NA	NA	NA	118331658	118331847	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_118331700_118331800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054625	chr14	-	1689	12	FSM	ENSMUSG00000022130.11	ENSMUST00000022727.10	1682	12	0	-7	0	5	multi-exon	FALSE	canonical	3	141	junction_8	15.4084875183551	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTATTTTGTTGTA	250	False	NA	3	True	ATTAAA	-27	NA	118370159	118349880	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_118350570_118351724_118351823_118352528_118352588_118353490_118353657_118354381_118354426_118355148_118355209_118357051_118357151_118359130_118359274_118364906_118364998_118365634_118365704_118368018_118368086_118370055
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054654	chr14	-	170	1	Intergenic	novelGene_1734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAAGGAACTTTGG	2635	False	NA	NA	False	NA	NA	NA	118691157	118690987	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_118691000_118691200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054676	chr14	+	5179	12	FSM	ENSMUSG00000022136.9	ENSMUST00000022734.9	5141	12	-33	-5	-33	5	multi-exon	FALSE	canonical	3	143	junction_10	14.8340684499182	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGCTTCTTATTCATGT	2296	False	NA	20	True	AATAAA	-22	NA	119175354	119219114	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_119175583_119190520_119190632_119195279_119195405_119198197_119198273_119205400_119205554_119207511_119207694_119208094_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214121_119214271_119215438
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054690	chr14	+	4551	9	FSM	ENSMUSG00000022139.18	ENSMUST00000088419.13	4552	9	2	-1	2	1	multi-exon	FALSE	canonical	3	31	junction_3	5.41842920042331	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTTGCGGTCTTCCTTC	6831	False	NA	8	True	AATAAA	-18	NA	120513082	120669110	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_120513318_120562205_120562825_120616561_120616727_120622802_120623004_120626311_120626576_120633123_120633178_120633862_120634017_120642049_120642145_120666346
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054695	chr14	+	4298	2	FSM	ENSMUSG00000051615.15	ENSMUST00000062117.14	4191	2	-107	0	-107	0	multi-exon	FALSE	canonical	3	102	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCTTGTGTTTGTTGCT	NA	False	NA	NA	False	AATAAA	-16	NA	120715748	120744606	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_120716453_120741012
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054708	chr14	+	188	1	Intergenic	novelGene_1735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGGGGAATAAAATAGTC	NA	False	NA	NA	False	NA	NA	NA	121057279	121057467	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_121057300_121057500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054715	chr14	+	199	1	Intergenic	novelGene_1736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGAAAGAAACCTCTAA	NA	False	NA	NA	False	NA	NA	NA	121075875	121076074	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_121075900_121076100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054718	chr14	+	184	1	Intergenic	novelGene_1737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGGTCACCTGACTCAT	NA	False	NA	NA	False	NA	NA	NA	121083058	121083242	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_121083100_121083200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054757	chr14	+	332	1	Intergenic	novelGene_1738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCAACCATGGGTGTTT	NA	False	NA	NA	False	NA	NA	NA	121740705	121741037	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_121740700_121741000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054765	chr14	+	2197	9	FSM	ENSMUSG00000041765.7	ENSMUST00000039803.7	2139	9	-50	-8	-50	8	multi-exon	FALSE	canonical	3	342	junction_2	40.200862863874	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTTTATACTTCTCCA	8836	False	NA	24	True	AATAAA	-24	NA	122115981	122258454	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054785	chr14	-	181	1	Intergenic	novelGene_1739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAATATAGATTTAA	NA	False	NA	NA	False	NA	NA	NA	122217418	122217237	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_122217200_122217400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054803	chr14	+	1246	8	FSM	ENSMUSG00000025545.11	ENSMUST00000026625.7	1231	8	-10	-5	-10	5	multi-exon	FALSE	canonical	3	643	junction_7	45.2372430997437	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTGCTATTGTCTATT	NA	False	NA	17	True	AATAAA	-27	NA	122419105	122639651	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_122419194_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054813	chr14	+	210	1	Intergenic	novelGene_1740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCACTGAGCTATCTTTC	NA	False	NA	NA	False	NA	NA	NA	122497599	122497809	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_122497600_122497800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054828	chr14	+	1235	8	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	19461	0	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	209.063900005989	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATGGTTTTGCTATTGT	NA	False	NA	12	True	AATAAA	-22	NA	122514913	122639646	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr14_+_122514996_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054840	chr14	+	178	1	Intergenic	novelGene_1741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAACCACTGATTCCCAGT	NA	False	NA	NA	False	NA	NA	NA	122770499	122770677	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_+_122770500_122770700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054842	chr14	+	2504	24	FSM	ENSMUSG00000041650.16	ENSMUST00000038374.13	2592	24	-28	116	-13	0	multi-exon	FALSE	canonical	3	76	junction_1	20.0942015919555	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTAGTTTGCCCTTTTTTC	NA	False	NA	16	True	AATAAA	-19	NA	122771722	123127240	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_+_122771872_122795126_122795205_122800190_122800239_122800330_122800400_122820028_122820143_122822468_122822523_122854165_122854298_122875792_122875830_122887663_122887743_122896089_122896193_122901665_122901761_122905932_122906084_122922293_122922438_122923514_122923590_122927510_122927580_122929591_122929668_122938466_122938578_122951434_122951538_122975313_122975417_123027767_123027867_123050605_123050660_123114175_123114317_123124458_123124537_123126898
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054858	chr14	-	3288	18	NIC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	-9	0	combination_of_known_junctions	TRUE	canonical	3	23	junction_16	38.2839509410142	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGGTTTCTTTTTAG	NA	False	NA	4	True	AGTAAA	-26	NA	123220661	123156382	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215579_123215699_123220583
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054861	chr14	-	3393	18	FSM	ENSMUSG00000041594.19	ENSMUST00000037726.14	3416	18	23	0	15	0	multi-exon	FALSE	canonical	3	136	junction_13	13.8696352514015	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGGTTTCTTTTTAG	NA	False	NA	4	True	AGTAAA	-26	NA	123220672	123156382	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123220583
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054880	chr14	-	187	1	Intergenic	novelGene_1742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAACTTCCTTGTAGTT	NA	False	NA	NA	False	NA	NA	NA	124698192	124698005	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr14_-_124698000_124698200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054882	chr15	+	2013	5	FSM	ENSMUSG00000064373.14	ENSMUST00000159216.10	2085	5	75	-3	-2	2	multi-exon	FALSE	canonical	2	6	junction_1	1.78535710713571	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTCTTTATTGTTCA	9352	False	NA	17	True	AATAAA	-22	NA	3300477	3309992	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_3300535_3304142_3304359_3305048_3305262_3306638_3306757_3308583
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054903	chr15	+	3417	17	FSM	ENSMUSG00000022186.15	ENSMUST00000110690.9	3527	17	114	-4	114	4	multi-exon	FALSE	canonical	3	193	junction_7	29.8008362927955	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTCCTCTTATTTG	NA	False	NA	20	True	AATAAA	-24	NA	4055978	4184830	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054915	chr15	+	197	1	Intergenic	novelGene_1743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTTGGGAAAATATGTTTA	NA	False	NA	NA	False	NA	NA	NA	5132679	5132876	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_5132700_5132900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054920	chr15	+	426	4	FSM	ENSMUSG00000041841.9	ENSMUST00000045356.9	835	4	-50	459	-50	4	multi-exon	FALSE	canonical	3	15185	junction_3	3886.71174930972	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTGATCTAAGGTACTT	2198	False	NA	40	True	AATAAA	-21	NA	5146076	5148163	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_5146167_5146768_5146905_5147100_5147186_5148048
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054958	chr15	-	204	1	Intergenic	novelGene_1744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGAGTTAGGAATTTTGG	NA	False	NA	NA	False	NA	NA	NA	5181157	5180953	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_5181000_5181200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054962	chr15	+	3645	5	FSM	ENSMUSG00000022151.17	ENSMUST00000118193.8	1671	5	1	-1975	1	1975	multi-exon	FALSE	canonical	3	51	junction_1	36.9323706252388	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTGTTCTGGTTTCA	NA	False	NA	NA	False	ATTAAA	-18	NA	5215006	5249792	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_5215054_5219062_5219285_5237849_5237932_5241479_5241612_5246630
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000054992	chr15	+	1031	1	FSM	ENSMUSG00000067547.7	ENSMUST00000146631.2	819	1	-67	-145	-67	145	mono-exon	FALSE	NA	NA	NA	NA	NA	321	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTATTATTCCAGAAAGAT	NA	False	NA	NA	False	AATAAA	-39	NA	6683336	6684367	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_6683300_6684400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055009	chr15	+	192	1	Intergenic	novelGene_1745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTTAAATAAGATTTAATG	NA	False	NA	NA	False	NA	NA	NA	7657917	7658109	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_7657900_7658100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055017	chr15	-	2151	18	FSM	ENSMUSG00000039828.8	ENSMUST00000045766.8	2126	18	-18	-7	0	0	multi-exon	TRUE	canonical	3	158	junction_1	88.3053055575902	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCCTTTCTGTTATGG	NA	False	NA	1	True	AATAAA	-21	NA	8128693	7902535	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_7902735_7913761_7913925_7915043_7915161_7916809_7916890_7918556_7918658_7949967_7950107_7951549_7951635_7953688_7953789_8006448_8006624_8049069_8049147_8065211_8065366_8072191_8072326_8075912_8075973_8108643_8108849_8111945_8112067_8123159_8123244_8128439_8128506_8128602
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055028	chr15	+	204	1	Intergenic	novelGene_1746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCGAAGGTTGACTAACAT	NA	False	NA	NA	False	NA	NA	NA	8036211	8036415	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_8036200_8036400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055037	chr15	+	181	1	Intergenic	novelGene_1747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAAAATACTTCAAGTC	NA	False	NA	NA	False	NA	NA	NA	8050536	8050717	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_8050500_8050700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055038	chr15	+	205	1	Intergenic	novelGene_1748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTATCCAAGGAGCTAA	NA	False	NA	NA	False	NA	NA	NA	8063291	8063496	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_8063300_8063500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055042	chr15	+	209	1	Intergenic	novelGene_1749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAGATGGCCAAAACATC	NA	False	NA	NA	False	NA	NA	NA	8074343	8074552	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_8074300_8074600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055048	chr15	+	198	1	Intergenic	novelGene_1750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTGGTTTTTCGAGA	1988	False	NA	NA	False	TTTAAA	-3	NA	8115661	8115859	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_8115700_8115900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055056	chr15	-	1684	4	FSM	ENSMUSG00000039828.8	ENSMUST00000227371.2	1130	4	18	-572	0	572	multi-exon	FALSE	canonical	3	289	junction_1	79.3823378060608	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTATGTTGTCTCAT	NA	False	NA	3	True	NA	NA	NA	8128675	8121138	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_8122600_8123159_8123244_8128439_8128506_8128602
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055064	chr15	+	6415	35	FSM	ENSMUSG00000022142.9	ENSMUST00000163765.3	7832	35	29	1388	29	1035	multi-exon	TRUE	canonical	3	205	junction_4	36.1069753346922	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTTGTGTTTCCATTTC	NA	False	NA	12	True	AATGAA	-22	NA	8138785	8189343	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055080	chr15	+	207	1	Intergenic	novelGene_1751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCCTAGGACAGCCAG	NA	False	NA	NA	False	NA	NA	NA	8214207	8214414	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_8214200_8214400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055088	chr15	+	201	1	Intergenic	novelGene_1752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGAGGGTGCTGTTAGTG	NA	False	NA	NA	False	NA	NA	NA	8290496	8290697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_8290500_8290700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055092	chr15	+	185	1	Intergenic	novelGene_1753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCCGGGCAGTGGTGGCG	NA	False	NA	NA	False	NA	NA	NA	8483251	8483436	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_8483300_8483400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055102	chr15	-	182	1	Intergenic	novelGene_1754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAAGGAAGACTGCT	8787	False	NA	NA	False	NA	NA	NA	8634440	8634258	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_8634300_8634400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055107	chr15	-	3893	10	FSM	ENSMUSG00000005360.15	ENSMUST00000005493.14	4163	10	270	0	2	0	multi-exon	FALSE	canonical	3	39	junction_5	8.52447456836295	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTGTATGTTATTTAT	NA	False	NA	NA	False	AATAAA	-22	NA	8739978	8663607	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_8665824_8668539_8668675_8671665_8671861_8672383_8672618_8675143_8675437_8679026_8679070_8680332_8680538_8717771_8717910_8738045_8738324_8739822
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055120	chr15	+	200	1	Intergenic	novelGene_1755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTGGGTAATGTAATAGT	NA	False	NA	NA	False	NA	NA	NA	8665929	8666129	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_8665900_8666100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055125	chr15	+	195	1	Intergenic	novelGene_1756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTCTTTTTTTTTTTTA	2439	False	NA	NA	False	NA	NA	NA	8834766	8834961	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_8834800_8835000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055136	chr15	-	201	1	Intergenic	novelGene_1757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTTAAAGATT	NA	False	NA	NA	False	NA	NA	NA	8835157	8834956	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_8835000_8835200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055143	chr15	+	202	1	Intergenic	novelGene_1758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTAGGATGTTAAAAGGG	5413	False	NA	NA	False	NA	NA	NA	8843487	8843689	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_8843500_8843700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055151	chr15	+	195	1	Intergenic	novelGene_1759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGTAATGTAAGACGGG	5795	False	NA	NA	False	NA	NA	NA	8843869	8844064	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_8843900_8844100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055156	chr15	+	3396	12	NIC	ENSMUSG00000022253.18	novel	4135	13	NA	NA	-51	307	combination_of_known_junctions	FALSE	canonical	3	231	junction_7	43.3900243705397	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTTCTTATTTCCTA	26	False	NA	3	True	AATAAA	-23	NA	9071288	9110255	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055168	chr15	+	3410	13	FSM	ENSMUSG00000022253.18	ENSMUST00000190591.10	4135	13	1	724	1	307	multi-exon	FALSE	canonical	3	112	junction_7	89.5046553724069	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTTCTTATTTCCTA	7	False	NA	3	True	AATAAA	-23	NA	9071340	9110255	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9098897_9098964_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055179	chr15	-	3144	10	FSM	ENSMUSG00000054115.13	ENSMUST00000096482.10	3118	10	-23	-3	-23	3	multi-exon	TRUE	canonical	3	163	junction_7	20.0690167197789	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGCTGCTTTTTATATC	NA	False	NA	NA	False	AATAAA	-23	NA	9140475	9112069	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_9113956_9116947_9117056_9117177_9117230_9121638_9121770_9122323_9122423_9123956_9124092_9125146_9125291_9127972_9128085_9139518_9139791_9140270
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055190	chr15	-	6995	2	Intergenic	novelGene_1760	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	9226275	9219242	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_9220283_9220320
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055196	chr15	-	2330	1	Intergenic	novelGene_1761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCGTCTTGGCTACATTT	8	False	NA	2	True	NA	NA	NA	9357162	9354832	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_9354800_9357200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055206	chr15	+	197	1	Intergenic	novelGene_1762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCAGAATGGGCTTTCC	NA	False	NA	NA	False	NA	NA	NA	9899882	9900079	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_9899900_9900100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055211	chr15	-	2144	12	FSM	ENSMUSG00000044224.17	ENSMUST00000136591.8	2060	12	-89	5	-89	4	multi-exon	TRUE	canonical	3	660	junction_1	60.8163473021321	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCTTTCTGCTTCAGTG	NA	False	NA	-20	True	ATTAAA	-18	NA	10470691	10446846	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205_10461511_10461961_10462085_10462308_10462433_10463972_10464067_10470350
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055222	chr15	-	2670	10	FSM	ENSMUSG00000022247.13	ENSMUST00000022855.12	2664	10	-3	-3	-3	3	multi-exon	FALSE	canonical	3	2074	junction_1	190.855449147086	856	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGCTTTTTTTTTTTTCG	NA	False	NA	NA	False	AATAAA	-28	NA	10486036	10474861	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_10476683_10476892_10477022_10478754_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380_10483493_10485820
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055258	chr15	+	1410	7	NNC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	324.625639091486	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGACTTACTGTACTGTCC	35	False	NA	18	True	AATAAA	-23	NA	10486134	10493766	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_+_10486368_10486538_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239_10493477_10493557
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055275	chr15	-	4974	18	FSM	ENSMUSG00000022246.15	ENSMUST00000169385.3	4759	18	-220	5	-163	-5	multi-exon	FALSE	canonical	3	80	junction_8	29.2639816641101	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGGATTTGTGGTGTT	8677	False	NA	-8	True	AATAAA	-21	NA	10714873	10569059	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10589344_10589432_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10714608
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055286	chr15	-	183	1	Intergenic	novelGene_1763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAATAATTTTTAAAAGT	NA	False	NA	NA	False	NA	NA	NA	10604845	10604662	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_10604700_10604800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055292	chr15	+	1572	5	FSM	ENSMUSG00000022244.8	ENSMUST00000070877.7	2577	5	-14	1019	-14	600	multi-exon	FALSE	canonical	3	110	junction_2	9.36416040016402	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCAGTGGTTTTAAGTT	35	False	NA	35	True	AATAAA	-45	NA	10981827	10995693	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_10982140_10983435_10983580_10984771_10984933_10988844_10989032_10994925
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055301	chr15	-	2676	19	FSM	ENSMUSG00000022241.7	ENSMUST00000022849.7	4005	19	-24	1353	-24	351	multi-exon	FALSE	canonical	3	2899	junction_10	215.823487548918	772	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCCTCACGGTTATA	NA	False	NA	1	True	AATAAA	-24	NA	11399775	11383739	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055318	chr15	-	2435	8	FSM	ENSMUSG00000022206.8	ENSMUST00000228603.2	2437	8	3	-1	3	1	multi-exon	FALSE	canonical	3	16	junction_2	6.17433793856409	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGAGGAGGTGTGTGACAAA	1448	False	NA	NA	False	ATTAAA	-23	NA	11905757	11844467	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_11845375_11846383_11846469_11848554_11848691_11851513_11851609_11858702_11858839_11883383_11883551_11895767_11895891_11904971
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055322	chr15	-	3344	5	FSM	ENSMUSG00000022205.16	ENSMUST00000022816.15	3372	5	31	-3	-15	3	multi-exon	FALSE	canonical	3	7728	junction_1	236.548620794965	1548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTGTTATCCCATGT	840	False	NA	NA	False	AATAAA	-14	NA	11996113	11981421	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_11984384_11986541_11986651_11991044_11991168_11993874_11993948_11996036
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055334	chr15	-	688	5	NNC	ENSMUSG00000022205.16	novel	3372	5	NA	NA	6	66	at_least_one_novel_splicesite	FALSE	canonical	3	182	junction_4	3424.13773817585	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTACCCTTTTTTGAT	861	False	NA	79	True	AATAAA	-22	NA	11996092	11984060	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_-_11984384_11986541_11986651_11991044_11991168_11993874_11993948_11996032
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055340	chr15	+	4661	20	FSM	ENSMUSG00000022201.17	ENSMUST00000122941.8	4850	20	-41	230	-41	-230	multi-exon	TRUE	canonical	1	184	junction_8	102.146464828737	217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTGTGTTATGTGGTAG	-1	True	NA	22	True	AATAAA	-22	NA	12117875	12185539	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055372	chr15	+	189	1	Intergenic	novelGene_1764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGCAGCTTGGCATATA	1552	False	NA	NA	False	NA	NA	NA	12147832	12148021	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_12147800_12148000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055401	chr15	+	3012	4	FSM	ENSMUSG00000022200.9	ENSMUST00000059680.7	2652	4	-19	-341	-19	15	multi-exon	TRUE	canonical	3	392	junction_2	32.4174164437712	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATGAGTGTTTTTCCT	2	True	NA	26	True	AATAAA	-28	NA	12321516	12351692	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_12322043_12339713_12339846_12343122_12343238_12349453
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055409	chr15	+	191	1	Intergenic	novelGene_1765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGCGTGGTGGCGCACG	NA	False	NA	NA	False	NA	NA	NA	12366858	12367049	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_12366900_12367000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055422	chr15	-	3725	9	FSM	ENSMUSG00000022195.8	ENSMUST00000057256.5	3966	9	7	234	-1	-234	multi-exon	FALSE	canonical	3	264	junction_8	28.8809517675578	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAATTTTTTATTATTT	NA	False	NA	-5	True	AATAAA	-18	NA	12824728	12808496	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823793_12824552
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055424	chr15	-	3567	8	FSM	ENSMUSG00000022195.8	ENSMUST00000227299.2	3206	8	0	-361	0	-234	multi-exon	FALSE	canonical	3	60	junction_7	97.0238767163074	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAATTTTTTATTATTT	NA	False	NA	-5	True	AATAAA	-18	NA	12824716	12808496	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12824552
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055437	chr15	+	4540	35	FSM	ENSMUSG00000022191.17	ENSMUST00000090292.13	4519	35	-21	0	-21	0	multi-exon	FALSE	canonical	3	495	junction_3	95.4793814587056	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTTTGCTACAGAGTAT	32	False	NA	30	True	ATTAAA	-20	NA	12824927	12935377	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055448	chr15	+	4613	36	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-5	-44	intron_retention	FALSE	canonical	3	44	junction_3	169.480343812418	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGTTGTTGTCTTAATG	48	False	NA	-15	True	AATAAA	-13	NA	12824943	12935332	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12830388_12830523_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055450	chr15	+	4454	35	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-4	-44	intron_retention	FALSE	canonical	3	79	junction_17	136.664317995404	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGTTGTTGTCTTAATG	49	False	NA	-15	True	AATAAA	-13	NA	12824944	12935332	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881810_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055482	chr15	+	183	1	Intergenic	novelGene_1766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTCTGCTTAATAGGCT	NA	False	NA	NA	False	NA	NA	NA	12912200	12912383	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_12912200_12912400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055488	chr15	+	221	1	Intergenic	novelGene_1767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTTTTAGACATGAAAGG	NA	False	NA	NA	False	NA	NA	NA	16198720	16198941	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_16198700_16198900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055505	chr15	+	5185	2	Intergenic	novelGene_1768	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	1235	junction_1	0	521	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTAGCTGGGTAAGGGGG	NA	False	NA	NA	False	NA	NA	NA	22699816	22705095	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_22704559_22704652
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055510	chr15	-	5186	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTTCTCGTTGGTGATT	9795	False	NA	NA	False	NA	NA	NA	22705095	22699816	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr15_-_22704588_22704680
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055524	chr15	-	3165	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	20.5	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAGACCGTTTTCTCG	9795	False	NA	NA	False	NA	NA	NA	22705095	22699825	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr15_-_22700210_22700266_22700670_22702717
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055535	chr15	-	7030	1	Intergenic	novelGene_1769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGTCTGTGGTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	23247550	23240520	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_23240500_23247600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055538	chr15	-	189	1	Intergenic	novelGene_1770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATTATATTAGGAATACT	NA	False	NA	NA	False	NA	NA	NA	23919899	23919710	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_23919700_23919900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055542	chr15	-	194	1	Intergenic	novelGene_1771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGATAGGAGTTCTCAT	NA	False	NA	0	True	NA	NA	NA	25305762	25305568	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_25305600_25305800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055553	chr15	-	1828	2	FSM	ENSMUSG00000045763.9	ENSMUST00000058845.9	1855	2	27	0	27	0	multi-exon	FALSE	canonical	3	95	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTGGCTTTTGGCTTGA	NA	False	NA	NA	False	AATAAA	-20	NA	25413823	25363362	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_25365005_25413637
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055566	chr15	+	160	1	Intergenic	novelGene_1772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTGGACATAATCTTTT	5111	False	NA	NA	False	NA	NA	NA	25718988	25719148	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_25719000_25719100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055581	chr15	+	5828	23	NIC	ENSMUSG00000022272.18	novel	5880	21	NA	NA	227	2	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	149.870088371328	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTCCTTGAGTAGTT	56	False	NA	18	True	AATAAA	-19	NA	25753291	25813761	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_+_25753407_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055586	chr15	+	5968	23	NNC	ENSMUSG00000022272.18	novel	618	2	NA	NA	1850	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	161.809454565476	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTTCCTTGAGTAG	30	False	NA	16	True	AATAAA	-17	NA	25754914	25813759	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_+_25755172_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055590	chr15	+	5732	23	NNC	ENSMUSG00000022272.18	novel	618	2	NA	NA	-2741	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	163.694389964302	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	864	False	NA	14	True	AATAAA	-15	NA	25756109	25813757	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_+_25756133_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055609	chr15	-	218	1	Intergenic	novelGene_1773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATTTATTAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	25771420	25771202	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_25771200_25771400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055613	chr15	+	6024	23	NIC	ENSMUSG00000022272.18	novel	1030	7	NA	NA	11	2	combination_of_known_junctions	FALSE	canonical	3	400	junction_1	95.5578769711826	302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTCCTTGAGTAGTT	1	True	NA	18	True	AATAAA	-19	NA	25774083	25813761	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_+_25774395_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055636	chr15	+	1791	6	FSM	ENSMUSG00000052253.7	ENSMUST00000061875.8	2802	6	-37	1048	-37	6	multi-exon	TRUE	canonical	3	450	junction_2	26.9962960422351	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTGAGCAGTGTTTAAA	-10	True	NA	21	True	AATAAA	-28	NA	25984414	25997519	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_25985270_25986883_25987133_25987246_25987410_25991538_25991652_25996191_25996336_25997252
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055642	chr15	+	200	1	Intergenic	novelGene_1774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATATGGTGGAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	27184092	27184292	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_27184100_27184300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055651	chr15	+	3550	12	FSM	ENSMUSG00000022265.8	ENSMUST00000022875.7	3498	12	-52	0	-52	0	multi-exon	FALSE	canonical	3	63	junction_1	12.2109556553338	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCTATTTTCATGCT	0	True	NA	23	True	ATTAAA	-19	NA	27466710	27594995	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_27467186_27544336_27544554_27553774_27553894_27557249_27557334_27562809_27562981_27564987_27565123_27567600_27567694_27571644_27571741_27590428_27590559_27591003_27591128_27591522_27591623_27593189
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055674	chr15	-	177	1	Intergenic	novelGene_1775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTAAGCCACTTA	NA	False	NA	NA	False	NA	NA	NA	28030742	28030565	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_28030600_28030700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055683	chr15	+	207	1	Intergenic	novelGene_1776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGTCATGGGAGGGGGG	NA	False	NA	NA	False	NA	NA	NA	28035183	28035390	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_28035200_28035400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055702	chr15	+	186	1	Intergenic	novelGene_1777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCGAGGGCACTGCCTGTT	1716	False	NA	NA	False	NA	NA	NA	31226892	31227078	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_31226900_31227100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055720	chr15	+	198	1	Intergenic	novelGene_1778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCCTAGACAATACCAAA	NA	False	NA	NA	False	NA	NA	NA	31488673	31488871	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_31488700_31488900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055730	chr15	-	1896	11	FSM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	-43	0	-43	0	multi-exon	FALSE	canonical	3	5476	junction_6	308.656459514458	3358	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAGCTTGATAGAGGAT	NA	False	NA	-3	True	AATAAA	-30	NA	31601993	31590945	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055749	chr15	+	1138	5	FSM	ENSMUSG00000039065.12	ENSMUST00000042702.7	1164	5	13	13	13	-13	multi-exon	FALSE	canonical	3	10	junction_1	6.68954408012983	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATTTAGCTTTATAACC	128	False	NA	14	True	ATTAAA	-14	NA	31602276	31617668	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_31602296_31606056_31606335_31608241_31608380_31609711_31609763_31617016
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055755	chr15	+	3251	5	FSM	ENSMUSG00000022261.7	ENSMUST00000022871.7	3527	5	71	205	71	-205	multi-exon	FALSE	canonical	3	85	junction_1	11.0227038425243	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTGTATAGACTCACAT	97	False	NA	NA	False	AATAAA	-21	NA	32920939	33034876	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_32921452_33017247_33017360_33023794_33023932_33028192_33028329_33032522
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055761	chr15	+	2654	2	Genic_Genomic	ENSMUSG00000115318.2	novel	2906	1	NA	NA	0	4136	multi-exon	FALSE	canonical	3	15	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTTGCTGCTAGTGAAG	NA	False	NA	NA	False	NA	NA	NA	33831593	33838635	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr15_+_33831870_33836257
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055763	chr15	+	7006	2	Genic_Genomic	ENSMUSG00000115318.2	novel	2906	1	NA	NA	0	4136	multi-exon	TRUE	canonical	3	117	junction_1	0	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTTGCTGCTAGTGAAG	NA	False	NA	NA	False	NA	NA	NA	33831593	33838635	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr15_+_33837513_33837548
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055773	chr15	+	7042	1	FSM	ENSMUSG00000115318.2	ENSMUST00000227474.2	2906	1	0	-4136	0	4136	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTTGCTGCTAGTGAAG	NA	False	NA	NA	False	NA	NA	NA	33831593	33838635	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_33831600_33838600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055780	chr15	+	262	1	Intergenic	novelGene_1779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATCAGGACGCAACTAT	NA	False	NA	NA	False	NA	NA	NA	33931165	33931427	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_33931200_33931400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055802	chr15	+	4765	11	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-7	-2087	combination_of_known_junctions	TRUE	canonical	3	78	junction_6	155.039865841015	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACATTCTCTGTGGGA	20	True	NA	25	True	AATAAA	-26	NA	34082832	34143683	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055824	chr15	+	1832	7	FSM	ENSMUSG00000022257.5	ENSMUST00000022867.5	1902	7	72	-2	-49	2	multi-exon	FALSE	canonical	3	358	junction_4	34.9698282650757	269	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGCTCCGCTGACTGC	62	False	NA	NA	False	ATTAAA	-24	NA	34238245	34284450	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_34238569_34258826_34258939_34272489_34272564_34273373_34273497_34276281_34276381_34277577_34277674_34283445
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055839	chr15	-	182	1	Intergenic	novelGene_1780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATAAATTGATAAACTGG	NA	False	NA	NA	False	NA	NA	NA	34368625	34368443	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_34368400_34368600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055844	chr15	+	188	1	Intergenic	novelGene_1781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCCTTAGCTATCTAC	NA	False	NA	NA	False	NA	NA	NA	34431217	34431405	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_34431200_34431400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055852	chr15	-	456	5	NNC	ENSMUSG00000058600.14	novel	886	5	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	3	777	junction_4	1906.75842400132	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	391	False	NA	-20	True	AATAAA	-27	NA	34443338	34440650	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_-_34440751_34441377_34441509_34442780_34442927_34443170_34443224_34443312
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055855	chr15	-	545	4	FSM	ENSMUSG00000058600.14	ENSMUST00000009039.6	570	4	30	-5	30	0	multi-exon	FALSE	canonical	3	4307	junction_1	558.07426825548	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	391	False	NA	-20	True	AATAAA	-27	NA	34443338	34440650	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_34440751_34441377_34441509_34442780_34442927_34443170
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055856	chr15	-	786	5	FSM	ENSMUSG00000058600.14	ENSMUST00000079735.12	886	5	100	0	100	0	multi-exon	FALSE	canonical	3	3551	junction_4	804.634194836387	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	43	False	NA	-20	True	AATAAA	-27	NA	34443686	34440650	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_34440751_34441377_34441509_34442780_34442927_34443170_34443224_34443330
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055874	chr15	-	994	6	FSM	ENSMUSG00000022323.12	ENSMUST00000022946.6	1004	6	9	1	9	-1	multi-exon	FALSE	canonical	3	250	junction_4	17.7245592328836	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTTTTTAATTTTGTT	NA	False	NA	-11	True	AATAAA	-20	NA	34495392	34484167	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_34484682_34485745_34485802_34486756_34486826_34487887_34487943_34488719_34488826_34495198
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055891	chr15	-	2886	11	FSM	ENSMUSG00000022329.16	ENSMUST00000018476.14	2914	11	28	0	28	0	multi-exon	FALSE	canonical	3	204	junction_2	35.5343495789637	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCGTTGTTGTTATTGT	NA	False	NA	2	True	AATAAA	-21	NA	35155924	34875641	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_34876967_34945151_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35099579_35099695_35114674_35114804_35115710_35115792_35155672
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055902	chr15	+	197	1	Intergenic	novelGene_1782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGTGAAGCAAACTGTC	NA	False	NA	NA	False	NA	NA	NA	35091044	35091241	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_35091000_35091200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055906	chr15	-	187	1	Intergenic	novelGene_1783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACAAACACCACAACCAA	NA	False	NA	NA	False	NA	NA	NA	35281739	35281552	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_35281600_35281700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055913	chr15	+	1726	4	FSM	ENSMUSG00000022330.6	ENSMUST00000022952.6	1724	4	0	-2	0	2	multi-exon	FALSE	canonical	3	27	junction_3	10.1434160364686	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTTGAGATTCATCTTG	117	False	NA	15	True	AATAAA	-18	NA	35296243	35303453	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_35296614_35300334_35301102_35302057_35302158_35302964
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055923	chr15	+	185	1	Intergenic	novelGene_1784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTCAGGGTTAAAATTC	NA	False	NA	NA	False	NA	NA	NA	35543103	35543288	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_35543100_35543300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055931	chr15	-	1230	3	FSM	ENSMUSG00000014313.16	ENSMUST00000153512.2	738	3	-488	-4	74	0	multi-exon	FALSE	canonical	3	8821	junction_1	415.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGCTTGGTTATTAAT	NA	False	NA	-1	True	AATAAA	-22	NA	35938279	35932121	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_35932244_35935430_35935560_35937300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055933	chr15	-	464	4	FSM	ENSMUSG00000014313.16	ENSMUST00000014457.15	503	4	39	0	0	0	multi-exon	FALSE	canonical	3	8539	junction_3	472.446822404384	1168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGCTTGGTTATTAAT	NA	False	NA	-1	True	AATAAA	-22	NA	35938353	35932121	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_35932244_35935430_35935560_35937300_35937431_35938270
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055953	chr15	+	478	4	FSM	ENSMUSG00000045996.13	ENSMUST00000180159.8	489	4	15	-4	-8	1	multi-exon	FALSE	canonical	3	328	junction_3	234.864973028239	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCTATTCAATGTCTTG	124	False	NA	NA	False	ATTAAA	-16	NA	36174170	36177157	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_36174228_36175132_36175203_36175529_36175623_36176899
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055966	chr15	+	200	1	Intergenic	novelGene_1785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACCAAGCTGGTCTAGA	1105	False	NA	NA	False	NA	NA	NA	36180789	36180989	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_36180800_36181000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055982	chr15	-	4300	10	FSM	ENSMUSG00000022280.10	ENSMUST00000022890.10	4277	10	-23	0	-23	0	multi-exon	FALSE	canonical	3	142	junction_2	15.6946165182307	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTGTGCCCAGGAAT	NA	False	NA	1	True	AATAAA	-17	NA	36283316	36240078	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_36242212_36244232_36244377_36245561_36245776_36247267_36247430_36247896_36248012_36253146_36253310_36254528_36254674_36260160_36260370_36265421_36266178_36283057
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000055987	chr15	+	186	1	Intergenic	novelGene_1786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	374	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCATAGTTCACCCAGTCA	NA	False	NA	NA	False	NA	NA	NA	36459656	36459842	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_36459700_36459800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056010	chr15	+	209	1	Intergenic	novelGene_1787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTGTAACTGGGTAGT	NA	False	NA	NA	False	TTTAAA	-9	NA	36549106	36549315	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_36549100_36549300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056015	chr15	-	2811	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	1581.86815415914	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTATGCTTTTATTTACT	377	False	NA	-4	True	AATAAA	-19	NA	36609217	36595901	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603098_36603230_36605685_36605802_36605987_36606182_36608557
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056017	chr15	-	2821	15	FSM	ENSMUSG00000022283.16	ENSMUST00000001809.15	2817	15	-1	-3	-1	3	multi-exon	FALSE	canonical	3	5069	junction_10	538.55476006794	3435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTATGCTTTTATTTACT	376	False	NA	-4	True	AATAAA	-19	NA	36609218	36595901	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056029	chr15	-	2822	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1575.23443671482	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTATGCTTTTATTTA	377	False	NA	-6	True	AATAAA	-17	NA	36609217	36595903	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597696_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056035	chr15	-	2862	15	NIC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	83	junction_1	1540.43655354909	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTATGCTTTTATTTA	377	False	NA	-6	True	AATAAA	-17	NA	36609217	36595903	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_36596344_36596762_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056042	chr15	-	3933	14	NIC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	1	intron_retention	FALSE	canonical	3	5069	junction_9	549.323338460614	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTATGCTTTTATTTA	377	False	NA	-6	True	AATAAA	-17	NA	36609217	36595903	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056064	chr15	-	89	1	ISM	ENSMUSG00000022283.16	ENSMUST00000001809.15	2817	15	0	13224	0	-3133	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTAAAAAATCCTTTGAAAA	377	False	NA	NA	False	ATTAAA	-15	NA	36609217	36609128	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr15_-_36609100_36609200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056070	chr15	-	191	1	Intergenic	novelGene_1788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACAAATGAAGGATGGC	NA	False	NA	NA	False	NA	NA	NA	36742685	36742494	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_36742500_36742700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056080	chr15	-	3523	7	FSM	ENSMUSG00000022285.18	ENSMUST00000022894.14	3288	7	274	-509	267	509	multi-exon	FALSE	canonical	3	85	junction_6	1526.66484716049	1631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGCTTCACGTCTGTTT	13	True	NA	0	True	AATAAA	-35	NA	36794508	36770504	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722_36793920_36794388
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056095	chr15	-	2817	6	FSM	ENSMUSG00000022285.18	ENSMUST00000110361.8	2285	6	267	-799	267	0	multi-exon	FALSE	canonical	3	223	junction_5	1591.90916826306	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGAGTCTCAGTGGTGA	13	True	NA	-39	True	NA	NA	NA	36794508	36771013	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36794388
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056097	chr15	-	3016	6	NIC	ENSMUSG00000022285.18	novel	3288	7	NA	NA	33	0	combination_of_known_junctions	FALSE	canonical	3	347	junction_5	1542.51527058892	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGAGTCTCAGTGGTGA	791	False	NA	-39	True	NA	NA	NA	36793730	36771013	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793411
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056103	chr15	-	3068	6	FSM	ENSMUSG00000022285.18	ENSMUST00000110362.4	2122	6	-12	-934	-12	0	multi-exon	FALSE	canonical	3	2654	junction_5	629.488808478753	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGAGTCTCAGTGGTGA	428	False	NA	-39	True	NA	NA	NA	36794093	36771013	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056147	chr15	+	179	1	Intergenic	novelGene_1789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAACAAAATATATATATATA	NA	False	NA	NA	False	NA	NA	NA	37001857	37002036	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_37001900_37002000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056151	chr15	-	212	1	Intergenic	novelGene_1790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTCCCATAATTTAGATA	NA	False	NA	NA	False	NA	NA	NA	37011229	37011017	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_37011000_37011200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056159	chr15	+	190	1	Intergenic	novelGene_1791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATATCTAGCCGGGCGGT	NA	False	NA	NA	False	NA	NA	NA	37021646	37021836	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_37021600_37021800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056169	chr15	-	186	1	Intergenic	novelGene_1792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTAAGTTTTTTCCA	NA	False	NA	NA	False	NA	NA	NA	37272477	37272291	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_37272300_37272500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056188	chr15	+	180	1	Intergenic	novelGene_1793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGCTGGAATGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	37949353	37949533	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_37949400_37949500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056202	chr15	-	9257	59	FSM	ENSMUSG00000037487.8	ENSMUST00000226414.2	8397	59	-428	-432	1	-2	multi-exon	TRUE	canonical	0	0	junction_21	178.88035064093	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTTTTTATGGTGTTAT	NA	False	NA	-7	True	AATAAA	-29	NA	38079097	37968104	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056218	chr15	+	199	1	Intergenic	novelGene_1794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAATCCCCCCTCCCTTTC	6213	False	NA	NA	False	NA	NA	NA	38094198	38094397	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_38094200_38094400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056240	chr15	-	3497	3	NIC	ENSMUSG00000037465.11	novel	3044	4	NA	NA	-3	0	intron_retention	FALSE	canonical	3	2313	junction_2	18.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGAGTCTGTTGTATG	NA	False	NA	-7	True	AATAAA	-18	NA	38300953	38294656	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_38297772_38297865_38298097_38300802
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056245	chr15	-	4357	12	FSM	ENSMUSG00000037458.16	ENSMUST00000065308.13	4871	12	0	514	0	297	multi-exon	FALSE	canonical	2	359	junction_2	59.7608180323933	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATCCTCAGTTGTTGGT	NA	False	NA	54	True	ACTAAA	-24	NA	38519510	38488184	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056253	chr15	-	4267	12	NIC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	0	55	combination_of_known_junctions	FALSE	canonical	2	46	junction_7	133.945283018758	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTATATTGCCCACG	NA	False	NA	-1	True	AATAGA	-21	NA	38519510	38488426	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497795_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056254	chr15	-	4112	12	NIC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	0	55	combination_of_known_junctions	FALSE	canonical	2	62	junction_3	129.988874285519	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTATATTGCCCACG	NA	False	NA	-1	True	AATAGA	-21	NA	38519510	38488426	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_38490717_38491719_38491935_38492487_38492601_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056255	chr15	-	4271	13	NIC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	1	55	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	196.59151106348	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTATATTGCCCACG	NA	False	NA	-1	True	AATAGA	-21	NA	38519509	38488426	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_38490717_38491719_38491935_38492487_38492601_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056256	chr15	-	4275	13	FSM	ENSMUSG00000037458.16	ENSMUST00000110329.8	4217	13	-3	-55	0	55	multi-exon	FALSE	canonical	0	0	junction_10	173.208669112015	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTATATTGCCCACG	NA	False	NA	-1	True	AATAGA	-21	NA	38519510	38488426	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056287	chr15	+	2104	13	FSM	ENSMUSG00000022295.9	ENSMUST00000022904.8	2071	13	-34	1	-34	-1	multi-exon	FALSE	canonical	3	1269	junction_12	107.259679697866	302	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGCTAGTCATTTATTT	150	False	NA	30	True	AATAAA	-16	NA	38662142	38692689	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056317	chr15	+	1548	11	FSM	ENSMUSG00000022300.11	ENSMUST00000022909.10	1551	11	3	0	3	0	multi-exon	FALSE	canonical	2	478	junction_2	96.4514903980234	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCAGTTGTGTGTTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	38976262	39010251	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_38976447_38982105_38982306_38982739_38982848_38986607_38986698_38987723_38987880_38991284_38991363_38993610_38993694_39001478_39001644_39007017_39007154_39008485_39008650_39010067
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056328	chr15	+	200	1	Intergenic	novelGene_1795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGAGTGCCAATTGGGC	8842	False	NA	NA	False	NA	NA	NA	39085810	39086010	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_39085800_39086000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056332	chr15	-	230	1	Intergenic	novelGene_1796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGCACTTGGGAGGCAG	NA	False	NA	NA	False	NA	NA	NA	39087314	39087084	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_39087100_39087300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056344	chr15	-	710	2	ISM	ENSMUSG00000022304.14	ENSMUST00000110306.9	2110	10	72605	0	8386	0	3prime_fragment	FALSE	canonical	3	216	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGTGTCTGAGTTCCAT	NA	False	NA	NA	False	AATAAA	-22	NA	39648261	39646092	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr15_-_39646506_39647964
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056381	chr15	+	4379	14	FSM	ENSMUSG00000022307.17	ENSMUST00000170127.9	4346	14	-32	-1	-32	0	multi-exon	FALSE	canonical	3	180	junction_7	35.9990137931977	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTGGATTTTTTCAAT	NA	False	NA	NA	False	AATAAA	-21	NA	41652304	41724444	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056385	chr15	+	2987	9	ISM	ENSMUSG00000022307.17	ENSMUST00000170127.9	4346	14	0	34015	0	3	5prime_fragment	FALSE	canonical	3	180	junction_7	41.0662574384372	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAGTTTCATTTATAATA	NA	False	NA	NA	False	NA	NA	NA	41652336	41690428	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056400	chr15	+	223	1	Intergenic	novelGene_1797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	437	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACATACATGTCTTGCCT	NA	False	NA	NA	False	TTTAAA	-12	NA	41810477	41810700	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_41810500_41810700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056403	chr15	-	184	1	Intergenic	novelGene_1798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAGTTTTTAAAAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	41855347	41855163	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_41855200_41855300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056412	chr15	-	1570	13	FSM	ENSMUSG00000022336.4	ENSMUST00000022960.4	1506	13	-46	-18	-46	18	multi-exon	TRUE	canonical	3	2495	junction_1	136.260065887095	376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTTTGTGCAAGTATA	2617	False	NA	-4	True	AATAAA	-34	NA	43146161	43113435	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145998
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056429	chr15	+	1255	11	FSM	ENSMUSG00000022337.8	ENSMUST00000022962.8	1231	11	-9	-15	-9	15	multi-exon	FALSE	canonical	3	590	junction_9	74.0384359640315	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTTTGTTTTATTGGA	NA	False	NA	25	True	AATAAA	-35	NA	43340615	43391174	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_43340722_43355565_43355680_43358135_43358201_43358559_43358646_43360456_43360515_43371040_43371127_43371257_43371318_43374210_43374293_43375095_43375207_43377140_43377246_43390792
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056440	chr15	-	3042	10	FSM	ENSMUSG00000038736.11	ENSMUST00000227843.2	5077	10	-29	2064	-14	844	multi-exon	FALSE	canonical	3	89	junction_5	79.6338844685826	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTAGTGATGTTTGTTTT	NA	False	NA	-5	True	AATAAA	-20	NA	44291298	44238622	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_44240083_44243455_44243616_44251864_44251991_44259906_44260052_44263415_44263624_44264677_44264861_44268744_44268926_44269205_44269389_44284114_44284270_44291057
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056441	chr15	-	3040	10	FSM	ENSMUSG00000038736.11	ENSMUST00000038719.8	2600	10	404	-844	-15	844	multi-exon	FALSE	canonical	3	194	junction_5	53.0869308043159	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTAGTGATGTTTGTTTT	NA	False	NA	-5	True	AATAAA	-20	NA	44291299	44238622	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_44240083_44243455_44243616_44251864_44251991_44259906_44260052_44263415_44263621_44264677_44264861_44268744_44268926_44269205_44269389_44284114_44284270_44291057
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056468	chr15	+	1488	7	FSM	ENSMUSG00000022339.10	ENSMUST00000227691.2	1945	7	-31	488	-31	1	multi-exon	FALSE	canonical	3	53	junction_1	13.0894359440479	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGTATATCCTTATTT	NA	False	NA	13	True	ATTAAA	-23	NA	44482539	44504423	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_44482766_44487838_44487937_44490952_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056479	chr15	+	184	1	Intergenic	novelGene_1799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAATATTATGCTG	NA	False	NA	NA	False	NA	NA	NA	45515048	45515232	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_45515000_45515200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056486	chr15	+	212	1	Intergenic	novelGene_1800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTTCACCCTGCATTTA	9124	False	NA	32	True	NA	NA	NA	46333720	46333932	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_46333700_46333900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056499	chr15	+	213	1	Intergenic	novelGene_1801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTAAATTGAAAGAGGAGA	NA	False	NA	NA	False	TTTAAA	-4	NA	50096952	50097165	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_50097000_50097200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056501	chr15	+	200	1	Intergenic	novelGene_1802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTATTATATCTAAGTAAT	NA	False	NA	NA	False	NA	NA	NA	50413666	50413866	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_50413700_50413900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056508	chr15	+	3792	1	Intergenic	novelGene_1803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAACAAACCCATAGACTA	NA	False	NA	NA	False	NA	NA	NA	50655023	50658815	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_50655000_50658800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056534	chr15	+	184	1	Intergenic	novelGene_1804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAACAAATATTTCTTAAC	NA	False	NA	NA	False	NA	NA	NA	51749490	51749674	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_51749500_51749700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056554	chr15	+	1303	2	FSM	ENSMUSG00000068522.5	ENSMUST00000090025.5	1348	2	45	0	45	0	multi-exon	FALSE	canonical	3	258	junction_1	0	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTTTCTAGTGGTCAT	NA	False	NA	16	True	AATAAA	-27	NA	51903547	51909118	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_51903927_51908194
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056566	chr15	+	903	4	FSM	ENSMUSG00000038622.9	ENSMUST00000037115.9	1007	4	-27	131	7	-131	multi-exon	FALSE	canonical	3	604	junction_2	11.2644968324772	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTACTTGTTTCTGTT	NA	False	NA	19	True	AATAAA	-32	NA	52575810	52593829	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_52576083_52582741_52582901_52584419_52584525_52593462
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056571	chr15	-	1682	10	ISM	ENSMUSG00000061731.10	ENSMUST00000077273.9	7663	11	238588	4223	297	403	3prime_fragment	TRUE	canonical	3	104	junction_4	9.53486131241108	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGGTTGTGTATATT	NA	False	NA	4	True	ATTAAA	-27	NA	52970967	52931656	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr15_-_52932246_52936688_52936861_52939164_52939326_52946480_52946571_52951450_52951547_52953326_52953446_52955678_52955812_52965080_52965201_52969422_52969531_52970873
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056576	chr15	+	203	1	Intergenic	novelGene_1805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGCTCCTCACTTGTGG	NA	False	NA	NA	False	NA	NA	NA	52938947	52939150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_52938900_52939200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056587	chr15	+	209	1	Intergenic	novelGene_1806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACGGCATTTGTGCATCC	NA	False	NA	NA	False	NA	NA	NA	52985798	52986007	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_52985800_52986000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056598	chr15	-	1330	9	FSM	ENSMUSG00000022422.14	ENSMUST00000023059.13	1324	9	0	-6	0	6	multi-exon	FALSE	canonical	3	218	junction_7	27.4268914571083	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTGACTTCTTTAAGAAT	NA	False	NA	1	True	AATAAA	-23	NA	54953887	54939488	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_54939662_54943588_54943738_54945562_54945718_54946441_54946495_54947444_54947584_54950148_54950240_54950997_54951133_54952350_54952520_54953621
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056616	chr15	+	198	1	Intergenic	novelGene_1807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAGATGTCCACACTGT	NA	False	NA	NA	False	NA	NA	NA	55112181	55112379	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_55112200_55112400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056619	chr15	-	829	7	FSM	ENSMUSG00000022370.14	ENSMUST00000172387.8	1223	7	399	-5	0	5	multi-exon	FALSE	canonical	3	905	junction_4	55.6070039553372	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTCTTACTGAAAACATA	NA	False	NA	5	True	AATAAA	-25	NA	55420745	55397484	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_55397734_55402425_55402548_55403518_55403606_55406719_55406781_55411537_55411632_55418715_55418840_55420653
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056622	chr15	-	708	6	FSM	ENSMUSG00000022370.14	ENSMUST00000164542.8	730	6	22	0	22	0	multi-exon	FALSE	canonical	3	91	junction_4	366.126754007407	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAATGTCTCTTACTGAAA	NA	False	NA	0	True	AATAAA	-20	NA	55420723	55397489	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_55397734_55402425_55402548_55403518_55403606_55406719_55406781_55418715_55418840_55420653
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056635	chr15	+	194	1	Antisense	novelGene_ENSMUSG00000022370.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAATAAAGGAAATGTCCT	NA	False	NA	NA	False	NA	NA	NA	55415244	55415438	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr15_+_55415200_55415400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056648	chr15	-	3571	4	ISM	ENSMUSG00000060429.13	ENSMUST00000039769.13	4919	7	230503	0	229864	0	3prime_fragment	FALSE	canonical	3	32	junction_1	5.31245915016974	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTAGGCTTATAATTTTA	NA	False	NA	2	True	AATAAA	-21	NA	55539842	55499783	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr15_-_55502824_55506050_55506242_55511252_55511450_55539699
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056661	chr15	+	4011	2	Antisense	novelGene_ENSMUSG00000060429.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	55735055	55740289	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr15_+_55738854_55740076
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056666	chr15	+	5238	1	Intergenic	novelGene_1808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTGGCTACATTTCTT	NA	False	NA	NA	False	NA	NA	NA	55735055	55740293	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_55735100_55740300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056669	chr15	+	251	1	Intergenic	novelGene_1809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAATGTTGCAATTTTCA	NA	False	NA	NA	False	NA	NA	NA	56577539	56577790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_56577500_56577800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056673	chr15	-	185	1	Intergenic	novelGene_1810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTGAATGTCACATTCT	NA	False	NA	NA	False	NA	NA	NA	56589343	56589158	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_56589200_56589300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056688	chr15	-	2938	8	FSM	ENSMUSG00000022365.7	ENSMUST00000022993.7	3175	8	-32	269	-32	-269	multi-exon	TRUE	canonical	3	365	junction_5	42.5977866628236	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTCTGTGTTAAGTTTC	NA	False	NA	-3	True	ATTAAA	-15	NA	57755876	57733166	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_57735303_57738892_57739004_57740813_57740867_57741880_57741977_57742444_57742472_57743395_57743461_57746830_57746943_57755538
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056696	chr15	+	3317	21	FSM	ENSMUSG00000022364.15	ENSMUST00000022992.13	3311	21	0	-6	0	0	multi-exon	FALSE	canonical	3	200	junction_2	36.9403234961471	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAACTGTCTTCTTTGCT	NA	False	NA	14	True	AATAAA	-21	NA	57775594	57833463	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056705	chr15	+	3556	17	ISM	ENSMUSG00000022364.15	ENSMUST00000110175.9	3468	18	-2	-1	-2	1	intron_retention	FALSE	canonical	3	200	junction_2	25.2003689209107	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTCTGCATGTAATTGA	NA	False	NA	3	True	AATAAA	-17	NA	57775627	57822799	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056709	chr15	+	3168	20	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	59.3076396586785	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAACTGTCTTCTTTGCT	NA	False	NA	14	True	AATAAA	-21	NA	57775627	57833463	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_+_57775788_57779365_57779513_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056711	chr15	+	3479	22	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_18	60.8888806130719	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAACTGTCTTCTTTGCT	NA	False	NA	14	True	AATAAA	-21	NA	57775627	57833463	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199_57827321_57831304_57831401_57833119
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056754	chr15	-	209	1	Intergenic	novelGene_1811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAATGAAAGGTAAACAATT	NA	False	NA	NA	False	NA	NA	NA	57899462	57899253	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_57899300_57899500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056767	chr15	+	214	1	Intergenic	novelGene_1812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	656	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGGACCTGCTGGGTGGT	NA	False	NA	NA	False	NA	NA	NA	57954921	57955135	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_57954900_57955100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056779	chr15	-	194	1	ISM	ENSMUSG00000022360.9	ENSMUST00000226649.2	2209	4	4539	0	4539	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTCTAGTTCTTGTGT	NA	False	NA	-9	True	AATAAA	-22	NA	57957633	57957439	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr15_-_57957400_57957600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056783	chr15	-	5724	28	FSM	ENSMUSG00000022360.9	ENSMUST00000038194.5	5684	28	-38	-2	-38	0	multi-exon	TRUE	canonical	3	283	junction_25	31.7407623492731	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTCTAGTTCTTGTGT	NA	False	NA	-9	True	AATAAA	-22	NA	57998516	57957439	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056796	chr15	+	1386	6	FSM	ENSMUSG00000022359.11	ENSMUST00000067563.9	1383	6	-3	0	-3	0	multi-exon	FALSE	canonical	3	37	junction_4	11.5516232625549	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTTTTGAAGAATCTG	2657	False	NA	27	True	AATAAA	-17	NA	58004769	58022050	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_58004978_58011729_58011830_58014001_58014053_58015992_58016142_58016975_58017101_58021297
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056806	chr15	+	5631	24	FSM	ENSMUSG00000037119.5	ENSMUST00000037270.5	5560	24	-5	-66	-5	66	multi-exon	FALSE	canonical	3	296	junction_5	31.8077875639983	428	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCTTTCCTGTGTTTTT	NA	False	NA	7	True	ATTAAA	-20	NA	58287311	58329655	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056821	chr15	+	195	1	Intergenic	novelGene_1813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAAGATAGGTAATGTGAA	NA	False	NA	NA	False	NA	NA	NA	58631006	58631201	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_58631000_58631200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056829	chr15	-	223	1	Intergenic	novelGene_1814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTGTCTGGTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	58637508	58637285	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_58637300_58637500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056834	chr15	-	3855	7	FSM	ENSMUSG00000062373.9	ENSMUST00000072113.6	3747	7	-108	0	0	0	multi-exon	FALSE	canonical	3	142	junction_6	14.2087609906314	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGGCTTCTGTATCTGCCC	NA	False	NA	87	True	AATAAA	-17	NA	58695487	58654117	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_58656860_58658958_58659065_58661234_58661278_58662003_58662059_58666190_58666259_58669049_58669095_58694691
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056865	chr15	+	680	4	FSM	ENSMUSG00000022354.5	ENSMUST00000022980.5	704	4	28	-4	-24	4	multi-exon	FALSE	canonical	3	3308	junction_3	178.75557489364	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCTGAAGTGTTCTT	2844	False	NA	17	True	AATAAA	-18	NA	58805632	58811341	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_58805788_58808116_58808310_58809200_58809315_58811123
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056884	chr15	-	178	1	Intergenic	novelGene_1815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTGTTTTTTTGAGA	NA	False	NA	NA	False	NA	NA	NA	59180699	59180521	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_59180500_59180700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056893	chr15	+	2807	11	FSM	ENSMUSG00000022351.15	ENSMUST00000022977.14	2758	11	-48	-1	-44	1	multi-exon	FALSE	canonical	3	657	junction_1	53.8835782033822	239	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTTTGGTTTTTGTTG	NA	False	NA	14	True	AATAAA	-19	NA	59186881	59203042	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_59187979_59189644_59189898_59193162_59193344_59194684_59194782_59195462_59195577_59195655_59195828_59196310_59196407_59197883_59198027_59198418_59198516_59201588_59201677_59202573
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056899	chr15	-	185	1	Intergenic	novelGene_1816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTTGGCTTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	59193645	59193460	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_59193500_59193600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056920	chr15	+	1101	7	FSM	ENSMUSG00000059586.11	ENSMUST00000079703.11	1054	7	-46	-1	-6	1	multi-exon	FALSE	canonical	3	776	junction_4	74.7677886674618	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCATGGTCCTGTCTGC	NA	False	NA	17	True	AATAAA	-18	NA	59246089	59473534	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_59246205_59250716_59250888_59287873_59287981_59327161_59327316_59463545_59463647_59463986_59464094_59473188
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056921	chr15	+	1178	8	FSM	ENSMUSG00000059586.11	ENSMUST00000227173.2	1122	8	-44	-12	-6	0	multi-exon	FALSE	canonical	3	123	junction_4	348.219025608766	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCATGGTCCTGTCTG	NA	False	NA	16	True	AATAAA	-17	NA	59246089	59473533	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_59246205_59250716_59250888_59287873_59287981_59327161_59327316_59368625_59368704_59463545_59463647_59463986_59464094_59473188
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056935	chr15	+	3661	3	FSM	ENSMUSG00000032501.10	ENSMUST00000067543.8	4330	3	120	549	120	-549	multi-exon	FALSE	canonical	3	22	junction_1	4.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTGAGTTTCCTTTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	59520318	59528399	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_59521372_59523327_59523621_59526084
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056952	chr15	-	5175	2	FSM	ENSMUSG00000072568.5	ENSMUST00000100635.5	5565	2	68	322	68	-322	multi-exon	FALSE	canonical	3	40	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTTCCTCTTTACTCTG	NA	False	NA	-1	True	AATAAA	-21	NA	60696861	60691164	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_60695841_60696362
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056968	chr15	+	207	1	Intergenic	novelGene_1817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTTAGGAAAAAAAATCTC	NA	False	NA	NA	False	NA	NA	NA	61892619	61892826	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_61892600_61892800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056984	chr15	-	4028	13	FSM	ENSMUSG00000022378.15	ENSMUST00000228226.2	1896	13	-282	-1850	-147	3	multi-exon	FALSE	canonical	3	743	junction_12	159.721024150096	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCATTTGTATATATATA	NA	False	NA	-1	True	NA	NA	NA	63932474	63800942	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63894418_63894470_63932043
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056991	chr15	-	1803	11	NIC	ENSMUSG00000022378.15	novel	1770	12	NA	NA	-116	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_9	398.425212555631	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAG	8623	False	NA	-4	True	AATAAA	-22	NA	63869934	63802790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63842778_63842818_63869746
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000056993	chr15	-	1850	11	NIC	ENSMUSG00000022378.15	novel	1770	12	NA	NA	-119	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_10	335.160260174144	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAG	8620	False	NA	-4	True	AATAAA	-22	NA	63869937	63802790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63869746
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057007	chr15	-	1909	12	FSM	ENSMUSG00000022378.15	ENSMUST00000164532.3	1770	12	-139	0	-139	0	multi-exon	FALSE	canonical	3	316	junction_11	247.062410558028	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAG	8600	False	NA	-4	True	AATAAA	-22	NA	63869957	63802790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63869746
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057010	chr15	-	1970	13	NIC	ENSMUSG00000022378.15	novel	1770	12	NA	NA	-117	0	combination_of_known_junctions	FALSE	canonical	3	121	junction_10	411.541310198624	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAG	8622	False	NA	-4	True	AATAAA	-22	NA	63869935	63802790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63829433_63829517_63842778_63842818_63869746
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057019	chr15	-	2040	12	NIC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	3	50	junction_10	331.600900217103	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAG	NA	False	NA	-4	True	AATAAA	-22	NA	63932373	63802790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63894418_63894470_63932043
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057066	chr15	+	181	1	Intergenic	novelGene_1818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGAGGAGAGAGATCT	NA	False	NA	NA	False	NA	NA	NA	65584412	65584593	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_65584400_65584600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057075	chr15	+	5216	23	FSM	ENSMUSG00000015002.19	ENSMUST00000015146.16	5215	23	-3	2	3	-2	multi-exon	FALSE	canonical	3	451	junction_16	48.5493912261498	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGTGCATTTTTATTAT	NA	False	NA	15	True	AATAAA	-22	NA	65658885	65745663	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057100	chr15	+	197	1	Intergenic	novelGene_1819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATATAATGCATGGACAGA	NA	False	NA	NA	False	NA	NA	NA	66393965	66394162	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_66394000_66394200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057112	chr15	-	2886	16	FSM	ENSMUSG00000005125.14	ENSMUST00000005256.14	2889	16	1	2	0	-2	multi-exon	FALSE	canonical	2	22	junction_13	7.67854152818099	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTGTGTCTTTTCCTCT	NA	False	NA	-2	True	AATAAA	-16	NA	66841488	66801168	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_66802958_66805712_66805765_66808101_66808138_66809046_66809095_66809715_66809768_66810491_66810549_66811991_66812096_66813860_66813918_66814913_66815001_66815852_66815914_66816624_66816688_66818280_66818402_66820227_66820334_66831210_66831247_66832320_66832402_66841352
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057121	chr15	+	195	1	Intergenic	novelGene_1820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCCATCCTTTCTGCCA	NA	False	NA	NA	False	NA	NA	NA	67212753	67212948	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_67212800_67212900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057133	chr15	+	571	1	FSM	ENSMUSG00000068397.5	ENSMUST00000089785.5	483	1	-36	-52	-36	52	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTATTTTCATAATTGC	NA	False	NA	NA	False	AATAAA	-35	NA	68181631	68182202	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_68181600_68182200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057138	chr15	+	1947	9	FSM	ENSMUSG00000022332.9	ENSMUST00000022954.7	1887	9	-53	-7	-53	7	multi-exon	FALSE	canonical	3	281	junction_5	27.0277635034792	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTGTGTGAGCTAAC	NA	False	NA	14	True	AATAAA	-14	NA	68800215	68965368	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_68800683_68866900_68867020_68885206_68885324_68889176_68889324_68896548_68896689_68901563_68901760_68921227_68921311_68962982_68963042_68964749
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057148	chr15	+	215	1	Intergenic	novelGene_1821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGCCTGGTTAGGATTT	NA	False	NA	NA	False	NA	NA	NA	72725076	72725291	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_72725100_72725300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057158	chr15	+	190	1	Intergenic	novelGene_1822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGTGGAGAGCAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	72949433	72949623	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_72949400_72949600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057166	chr15	+	860	3	FSM	ENSMUSG00000068391.9	ENSMUST00000089765.9	871	3	20	-9	0	9	multi-exon	FALSE	canonical	3	479	junction_2	8	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAAGTGGTTTTAGGTT	NA	False	NA	16	True	ATTAAA	-27	NA	72962260	72965933	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_72962433_72964681_72964809_72965372
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057189	chr15	-	4189	32	FSM	ENSMUSG00000022607.19	ENSMUST00000110036.11	4417	32	0	228	0	-228	multi-exon	FALSE	canonical	3	91	junction_30	29.7827373894676	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGAGCTAACTGACCTT	1677	False	NA	-7	True	ATTAAA	-21	NA	73295040	73077178	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057208	chr15	+	182	1	Intergenic	novelGene_1823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	73144986	73145168	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_73145000_73145200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057217	chr15	+	196	1	Intergenic	novelGene_1824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGAGAGAAGCACTTTGT	NA	False	NA	NA	False	NA	NA	NA	73259327	73259523	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_73259300_73259500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057221	chr15	+	189	1	Intergenic	novelGene_1825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTAGACGCAGAGTCCT	NA	False	NA	NA	False	NA	NA	NA	73310621	73310810	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_73310600_73310800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057225	chr15	-	215	1	Intergenic	novelGene_1826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTGGAAGCTGTGGCGT	NA	False	NA	NA	False	NA	NA	NA	73322866	73322651	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_73322700_73322900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057234	chr15	-	199	1	Intergenic	novelGene_1827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGCTAAAACTACAGTAGC	NA	False	NA	NA	False	NA	NA	NA	73326587	73326388	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_73326400_73326600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057238	chr15	-	541	1	ISM	ENSMUSG00000079020.10	ENSMUST00000151288.8	7509	8	43918	2862	8136	4	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTGTTTATGTCCTTGG	NA	False	NA	1	True	AATAAA	-31	NA	73452675	73452134	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr15_-_73452100_73452700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057241	chr15	-	4508	8	NIC	ENSMUSG00000079020.10	novel	7509	8	NA	NA	-11	4	combination_of_known_junctions	FALSE	canonical	3	201	junction_7	37.6183845631741	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTGTTTATGTCCTTGG	NA	False	NA	1	True	AATAAA	-31	NA	73517622	73452134	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73477290_73477926_73517342
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057263	chr15	+	1723	6	FSM	ENSMUSG00000059895.14	ENSMUST00000053232.8	3260	6	-1	1538	-1	0	multi-exon	FALSE	canonical	3	41	junction_1	28.8124972885031	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTGAAGAGTGTTATA	NA	False	NA	21	True	AATAAA	-15	NA	73620221	73629077	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_73620315_73622977_73623877_73625604_73625698_73627142_73627274_73627876_73627952_73628645
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057271	chr15	-	897	1	FSM	ENSMUSG00000082585.4	ENSMUST00000120421.2	648	1	-131	-118	-131	118	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTACAGTGTCTTTTTTGT	NA	False	NA	NA	False	AAGAAA	-40	NA	73966313	73965416	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_73965400_73966300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057277	chr15	-	3057	3	FSM	ENSMUSG00000022602.15	ENSMUST00000023268.14	3055	3	-2	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	11.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTATGTGCCATTTCT	NA	False	NA	0	True	AATAAA	-14	NA	74544419	74540931	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_74541843_74542028_74542169_74542413
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057278	chr15	-	3054	3	FSM	ENSMUSG00000022602.15	ENSMUST00000110009.4	3054	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	19	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTATGTGCCATTTCT	NA	False	NA	0	True	AATAAA	-14	NA	74544419	74540931	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_74541843_74542028_74542166_74542413
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057294	chr15	-	3360	2	FSM	ENSMUSG00000046380.4	ENSMUST00000050234.4	5853	2	235	2258	235	-2258	multi-exon	FALSE	canonical	3	23	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGTCATGATTCTTCA	NA	False	NA	2	True	NA	NA	NA	74581149	74576407	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_74579714_74581095
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057301	chr15	-	3308	1	NIC	ENSMUSG00000046380.4	novel	5853	2	NA	NA	1669	-2258	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGTCATGATTCTTCA	NA	False	NA	2	True	NA	NA	NA	74579715	74576407	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_74576400_74579700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057308	chr15	+	1509	2	FSM	ENSMUSG00000056665.3	ENSMUST00000070923.3	1784	2	11	264	11	-264	multi-exon	FALSE	canonical	3	79	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGCCGGGGAGGTTCTC	4651	False	NA	15	True	ATTAAA	-16	NA	74593063	74596224	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_74593657_74595308
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057317	chr15	-	623	4	FSM	ENSMUSG00000044678.12	ENSMUST00000060301.6	791	4	169	-1	169	1	multi-exon	FALSE	canonical	3	104	junction_3	10.2740233382816	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTGGTTTGACTTCTGT	945	False	NA	-1	True	ATTAAA	-19	NA	74671666	74668721	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_74669121_74670383_74670483_74671267_74671345_74671618
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057328	chr15	+	1160	4	FSM	ENSMUSG00000022587.15	ENSMUST00000190810.7	924	4	440	-676	-35	0	multi-exon	FALSE	canonical	3	397	junction_1	104.416899441081	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTATGTCCTGGTTGT	8352	False	NA	27	True	AATAAA	-15	NA	74827466	74831180	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_74827567_74829625_74829727_74830117_74830238_74830341
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057331	chr15	+	1163	4	FSM	ENSMUSG00000022587.15	ENSMUST00000191436.7	1122	4	-33	-8	-33	8	multi-exon	FALSE	canonical	3	296	junction_1	144.768781165001	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGGTTGTCCTTAACC	8354	False	NA	35	True	AATAAA	-23	NA	74827468	74831188	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_74827567_74829628_74829727_74830117_74830238_74830341
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057376	chr15	-	2819	1	FSM	ENSMUSG00000047591.6	ENSMUST00000062002.6	2739	1	-93	13	-93	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGAACCTGGCTGTTG	NA	False	NA	-15	True	AATAAA	-17	NA	75620170	75617351	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_75617400_75620200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057381	chr15	-	3396	12	FSM	ENSMUSG00000075600.4	ENSMUST00000100538.4	3362	12	-34	0	-34	0	multi-exon	FALSE	canonical	3	58	junction_8	44.618492997359	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCCTGTCTTGACTACC	NA	False	NA	-1	True	AATAAA	-19	NA	75713798	75626278	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_75626800_75628471_75628816_75629388_75629574_75648838_75648971_75650914_75650985_75651128_75651288_75651362_75651406_75657301_75657487_75681376_75681528_75709315_75709513_75711104_75712414_75713698
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057392	chr15	+	194	1	Intergenic	novelGene_1828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGTGAGGGTAGATAG	NA	False	NA	NA	False	NA	NA	NA	75714806	75715000	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_75714800_75715000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057396	chr15	+	174	1	Intergenic	novelGene_1829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAATAAGTAGAG	NA	False	NA	NA	False	NA	NA	NA	75718798	75718972	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_75718800_75719000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057397	chr15	+	198	1	Intergenic	novelGene_1830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	525	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTTTCTCTGGAGAATA	NA	False	NA	NA	False	NA	NA	NA	75722441	75722639	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_75722400_75722600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057419	chr15	+	189	1	Intergenic	novelGene_1831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGCAAACTGAACA	NA	False	NA	NA	False	NA	NA	NA	75742654	75742843	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_75742700_75742800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057439	chr15	-	1037	9	NIC	ENSMUSG00000055762.17	novel	2842	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_5	1349.65903101487	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781155	75767336	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75769074_75769132_75772539_75772612_75772980_75773105_75781093
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057443	chr15	-	977	8	NIC	ENSMUSG00000055762.17	novel	2312	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	250	junction_7	1032.38266121806	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781155	75767336	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980_75773102_75781093
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057444	chr15	-	908	7	FSM	ENSMUSG00000055762.17	ENSMUST00000109972.9	1624	7	28	688	0	0	multi-exon	FALSE	canonical	3	464	junction_5	1042.33482571048	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781155	75767336	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772980_75773105_75781093
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057446	chr15	-	903	7	FSM	ENSMUSG00000055762.17	ENSMUST00000116440.9	896	7	-7	0	2	0	multi-exon	FALSE	canonical	3	250	junction_6	1385.14264207297	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781153	75767336	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772980_75773102_75781093
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057494	chr15	+	2408	2	FSM	ENSMUSG00000050846.10	ENSMUST00000037260.8	2486	2	80	-2	80	2	multi-exon	FALSE	canonical	3	106	junction_1	0	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGTAATTGGCATATC	NA	False	NA	12	True	AATAAA	-18	NA	75812880	75821251	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_75813009_75818971
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057506	chr15	+	1626	4	FSM	ENSMUSG00000034429.16	ENSMUST00000109966.8	1803	4	174	3	-10	0	multi-exon	FALSE	canonical	3	24	junction_3	7.71722460186015	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGAAGCCTGTTCTTCA	NA	False	NA	8	True	AATAAA	-13	NA	75841145	75847595	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_75841254_75844930_75845058_75845390_75845505_75846318
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057518	chr15	-	183	1	Intergenic	novelGene_1832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	893	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACTCATTTCCACATATA	8817	False	NA	NA	False	NA	NA	NA	75900763	75900580	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_75900600_75900800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057544	chr15	-	5511	37	NNC	ENSMUSG00000022568.18	novel	5599	38	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_26	92.1565152469924	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCTTGTCCTTTTGTC	NA	False	NA	-6	True	AATAAA	-16	NA	75941598	75919011	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936674_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057548	chr15	-	5507	37	NIC	ENSMUSG00000022568.18	novel	5599	38	NA	NA	12	-5	combination_of_known_junctions	FALSE	canonical	3	96	junction_9	77.9983529028374	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCTTGTCCTTTTGTC	NA	False	NA	-6	True	AATAAA	-16	NA	75941591	75919011	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057556	chr15	-	1910	12	FSM	ENSMUSG00000002524.18	ENSMUST00000100527.13	1881	12	-29	0	-18	0	multi-exon	FALSE	canonical	3	225	junction_7	445.848082194703	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCTGTGTCTGAAATTGG	NA	False	NA	0	True	CATAAA	-25	NA	75952791	75942030	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75946455_75946507_75947390_75947481_75947585_75947682_75949449_75949552_75952698
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057559	chr15	-	1826	11	NNC	ENSMUSG00000002524.18	novel	1821	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	121	junction_10	401.11844884024	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCTGTGTCTGAAATTGG	NA	False	NA	0	True	CATAAA	-25	NA	75952761	75942030	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75947390_75947481_75947585_75947682_75949449_75949549_75952698
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057563	chr15	-	1854	11	FSM	ENSMUSG00000002524.18	ENSMUST00000002599.11	1821	11	-25	-8	-13	0	multi-exon	FALSE	canonical	3	1143	junction_7	140.604729650179	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCTGTGTCTGAAATTGG	NA	False	NA	0	True	CATAAA	-25	NA	75952786	75942030	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75947390_75947481_75947585_75947682_75949449_75949552_75952698
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057589	chr15	-	1859	12	NNC	ENSMUSG00000002524.18	novel	1881	12	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	121	junction_11	542.386050797007	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGAAGTCCCTGTGTCT	NA	False	NA	-8	True	CATAAA	-17	NA	75952751	75942038	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75946455_75946507_75947390_75947481_75947585_75947682_75949449_75949549_75952698
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057592	chr15	-	185	1	Intergenic	novelGene_1833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAATTATAGCCAGATGG	NA	False	NA	NA	False	NA	NA	NA	76033063	76032878	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_76032900_76033100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057604	chr15	+	168	1	Intergenic	novelGene_1834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAAAGGGCAGCTCCC	NA	False	NA	NA	False	NA	NA	NA	76111537	76111705	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_76111500_76111700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057624	chr15	+	178	1	Intergenic	novelGene_1835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAATGTTCCCTTA	NA	False	NA	NA	False	NA	NA	NA	76162524	76162702	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_76162500_76162700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057632	chr15	-	200	1	Intergenic	novelGene_1836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCTTTTCCCTTAACCA	9515	False	NA	NA	False	NA	NA	NA	76199576	76199376	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_76199400_76199600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057640	chr15	-	182	1	Intergenic	novelGene_1837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAATCTTGAAAAAAGAAA	8592	False	NA	NA	False	NA	NA	NA	76200499	76200317	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_76200300_76200500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057650	chr15	+	1753	3	FSM	ENSMUSG00000034259.9	ENSMUST00000059045.8	1796	3	44	-1	-24	1	multi-exon	FALSE	canonical	0	0	junction_1	330.5	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACTAATGTCTTCTTTC	923	False	NA	9	True	NA	NA	NA	76211640	76214878	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_76211864_76213229_76213437_76213555
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057664	chr15	+	1220	7	FSM	ENSMUSG00000022551.9	ENSMUST00000023210.8	1520	7	-16	316	-16	12	multi-exon	FALSE	canonical	3	4240	junction_5	258.32822575596	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGGTCAATGACTAAAACA	NA	False	NA	37	True	AATAAA	-27	NA	76227706	76230144	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_76227893_76228501_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229676_76229778_76229854
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057685	chr15	+	1198	7	NIC	ENSMUSG00000022551.9	novel	1520	7	NA	NA	9	3	combination_of_known_junctions	FALSE	canonical	3	92	junction_1	1700.84897102071	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTTTAGCTGGTCAATG	NA	False	NA	28	True	AATAAA	-18	NA	76227741	76230135	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_+_76227893_76228479_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229676_76229778_76229854
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057704	chr15	+	1700	8	FSM	ENSMUSG00000022553.17	ENSMUST00000023212.15	1686	8	-12	-2	0	2	multi-exon	FALSE	canonical	3	425	junction_1	86.5157765487702	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAACCTGGGAGTTTGTGG	NA	False	NA	26	True	AATAAA	-18	NA	76235493	76238575	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_76235860_76236619_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057714	chr15	+	1635	8	FSM	ENSMUSG00000022553.17	ENSMUST00000160853.8	1651	8	18	-2	3	2	multi-exon	FALSE	canonical	3	203	junction_1	163.413086179455	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAACCTGGGAGTTTGTGG	NA	False	NA	26	True	AATAAA	-18	NA	76235511	76238575	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_76235860_76236666_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057738	chr15	+	5268	44	FSM	ENSMUSG00000022558.17	ENSMUST00000096385.11	5268	44	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_5	19.8740490552834	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTGACATTGTATCAAT	NA	False	NA	10	True	AATAAA	-16	NA	76264712	76337238	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057793	chr15	-	1941	17	FSM	ENSMUSG00000022555.13	ENSMUST00000023214.11	1888	17	-52	-1	-50	1	multi-exon	FALSE	canonical	3	155	junction_16	22.0368122411115	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCAGGGGTTGTGGAGGCT	NA	False	NA	-4	True	AATAAA	-19	NA	76396203	76386213	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018_76387085_76387158_76387272_76387353_76387399_76387473_76387516_76387589_76387629_76387717_76387822_76387905_76387981_76388064_76388173_76388314_76388421_76388548_76388602_76388685_76388772_76388865_76388907_76390765_76390854_76395754
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057804	chr15	+	179	1	Antisense	novelGene_ENSMUSG00000022559.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAAACCTTTATT	NA	False	NA	NA	False	NA	NA	NA	76419747	76419926	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr15_+_76419700_76419900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057818	chr15	-	1741	9	FSM	ENSMUSG00000022559.9	ENSMUST00000023219.9	1710	9	-33	2	-22	-2	multi-exon	FALSE	canonical	3	128	junction_8	22.8988946239769	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTTATTATAT	NA	False	NA	NA	False	AATAAA	-19	NA	76422968	76419922	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_76420164_76420424_76420672_76420772_76421005_76421092_76421207_76421289_76421398_76421488_76421621_76421922_76421987_76422116_76422276_76422524
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057825	chr15	-	1977	8	FSM	ENSMUSG00000022559.9	ENSMUST00000230513.2	1953	8	-20	-4	-9	-2	multi-exon	TRUE	canonical	3	133	junction_7	19.025224930956	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTTATTATAT	NA	False	NA	NA	False	AATAAA	-19	NA	76422955	76419922	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_76420164_76420424_76420672_76420772_76421005_76421092_76421207_76421289_76421398_76421488_76421621_76421922_76421987_76422116
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057839	chr15	+	186	1	Intergenic	novelGene_1838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGATACTAAGGAAGGAG	NA	False	NA	NA	False	NA	NA	NA	76451601	76451787	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_76451600_76451800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057849	chr15	+	1994	15	FSM	ENSMUSG00000022550.19	ENSMUST00000162503.8	2040	15	46	0	-1	0	multi-exon	FALSE	canonical	3	114	junction_10	17.9268638913668	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTTCTTTGTGTTTTAT	3148	False	NA	NA	False	AAGAAA	-1	NA	76460603	76480016	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057859	chr15	-	178	1	Antisense	novelGene_ENSMUSG00000116238.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGCAGTGGTGGCGCAC	NA	False	NA	NA	False	NA	NA	NA	76462423	76462245	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr15_-_76462200_76462400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057888	chr15	-	2275	12	FSM	ENSMUSG00000063354.8	ENSMUST00000230977.2	2750	12	486	-11	-50	3	multi-exon	FALSE	canonical	3	334	junction_11	41.2272476696326	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTCTTCTTGTAGAGTT	8616	False	NA	1	True	AATAAA	-24	NA	76501098	76496579	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76497986_76498146_76498256_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500074_76500360_76500772
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057900	chr15	-	1763	10	NIC	ENSMUSG00000063354.8	novel	2750	12	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	3	43	junction_9	124.308258816044	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACACTGTCTTCTTGTAGA	8644	False	NA	-2	True	AATAAA	-21	NA	76501070	76496582	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76497986_76498146_76498256_76498430_76498686_76498859_76498949_76499114_76500772
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057908	chr15	-	1937	11	NIC	ENSMUSG00000063354.8	novel	2750	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_10	121.107555503362	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACACTGTCTTCTTGTAGA	8666	False	NA	-2	True	AATAAA	-21	NA	76501048	76496582	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76497986_76498146_76498256_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500772
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057921	chr15	-	1493	9	NIC	ENSMUSG00000115987.2	novel	911	10	NA	NA	4	0	intron_retention	TRUE	canonical	3	892	junction_8	91.0971322270904	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGGCAGCTATACT	9612	False	NA	-25	True	AATAAA	-17	NA	76510265	76506308	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76508376_76508647_76508686_76508791_76508821_76509333_76509406_76510188
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057932	chr15	-	4222	26	FSM	ENSMUSG00000059323.15	ENSMUST00000168185.8	4235	26	14	-1	14	1	multi-exon	FALSE	canonical	3	178	junction_21	25.6881606970994	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCAGCTCTCTGCGA	NA	False	NA	0	True	AATAAA	-17	NA	76524144	76510436	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522671_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057945	chr15	-	3829	4	NIC	ENSMUSG00000053929.18	novel	3959	5	NA	NA	-20	-383	combination_of_known_junctions	TRUE	canonical	3	230	junction_1	231.34534070663	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAAGTGTTTTTATGGTT	NA	False	NA	-4	True	AATAAA	-20	NA	76541140	76527977	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_76530775_76532298_76532511_76533140_76533380_76540559
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057953	chr15	-	1804	4	FSM	ENSMUSG00000053929.18	ENSMUST00000229524.2	1513	4	-227	-64	-23	0	multi-exon	FALSE	canonical	3	120	junction_1	282.269768523344	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCTGTGTGTCTGCTT	NA	False	NA	-1	True	AATAAA	-24	NA	76541143	76531126	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_76531896_76532298_76532511_76533140_76533380_76540559
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057962	chr15	-	1869	4	FSM	ENSMUSG00000053929.18	ENSMUST00000176274.2	1854	4	-15	0	-15	0	multi-exon	FALSE	canonical	3	306	junction_1	196.445638508186	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCTGTGTGTCTGCTT	NA	False	NA	-1	True	AATAAA	-24	NA	76541135	76531126	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_76531969_76532298_76532511_76533140_76533380_76540559
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057983	chr15	-	1696	3	FSM	ENSMUSG00000033837.6	ENSMUST00000037824.6	1365	3	65	-396	65	396	multi-exon	FALSE	canonical	3	304	junction_2	19.5	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAAGTCTGGTATTGGGG	NA	False	NA	-4	True	AGTAAA	-20	NA	76554083	76552028	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_76553341_76553428_76553534_76553804
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000057997	chr15	+	2646	11	FSM	ENSMUSG00000033819.17	ENSMUST00000037551.15	2692	11	46	0	14	0	multi-exon	FALSE	canonical	3	82	junction_1	16.1864140562386	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCCATGTGTCTCACT	NA	False	NA	22	True	GATAAA	-17	NA	76555860	76579119	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_76555963_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058017	chr15	+	219	1	Intergenic	novelGene_1839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	262	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTGGACCATTAAGTTT	NA	False	NA	NA	False	NA	NA	NA	76592078	76592297	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_76592100_76592300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058034	chr15	-	1746	3	FSM	ENSMUSG00000116138.2	ENSMUST00000036247.10	1754	3	8	0	8	0	multi-exon	FALSE	canonical	3	37	junction_1	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTATTGACTTTAAATGA	9317	False	NA	-4	True	ATTAAA	-23	NA	76608032	76605664	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_76607184_76607370_76607420_76607854
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058040	chr15	-	4594	12	FSM	ENSMUSG00000033697.17	ENSMUST00000239003.2	4587	12	-6	-1	-6	1	multi-exon	FALSE	canonical	3	33	junction_5	14.9749101461177	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTGTGTTTCTTTCAGG	8163	False	NA	-3	True	AATAAA	-18	NA	76702376	76608183	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_76609377_76609522_76609693_76610122_76610215_76610828_76611029_76611602_76611677_76614563_76614657_76619076_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76702191
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058047	chr15	+	197	1	Intergenic	novelGene_1840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGGGGGCAGAACATGGC	2554	False	NA	NA	False	NA	NA	NA	76628773	76628970	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_76628800_76629000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058081	chr15	+	1050	2	FSM	ENSMUSG00000055041.9	ENSMUST00000109793.3	920	2	-16	-114	10	0	multi-exon	FALSE	canonical	3	59	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTATTCTATTAGGGAA	NA	False	NA	NA	False	ATTAAA	-23	NA	76784119	76785505	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_76784216_76784551
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058093	chr15	+	889	6	FSM	ENSMUSG00000003970.10	ENSMUST00000004072.10	851	6	-36	-2	-36	2	multi-exon	FALSE	canonical	3	5295	junction_1	2369.37927736359	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCGTGTGTGAGCCTCTTT	NA	False	NA	36	True	AATAAA	-20	NA	76788241	76790516	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_76788310_76788502_76788651_76788738_76788881_76789017_76789237_76790055_76790172_76790320
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058098	chr15	+	1020	5	FSM	ENSMUSG00000003970.10	ENSMUST00000229183.2	1020	5	0	0	0	0	multi-exon	FALSE	canonical	3	10804	junction_2	302.309754225695	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	False	NA	34	True	AATAAA	-18	NA	76788301	76790514	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_76788651_76788738_76788881_76789017_76789237_76790055_76790172_76790320
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058109	chr15	+	194	1	ISM	ENSMUSG00000003970.10	ENSMUST00000004072.10	851	6	2043	0	1818	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	False	NA	34	True	AATAAA	-18	NA	76790320	76790514	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr15_+_76790300_76790500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058114	chr15	+	216	1	Intergenic	novelGene_1841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTGAAGAGGCAGCAGATG	NA	False	NA	NA	False	ATTAAA	-10	NA	76792570	76792786	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_76792600_76792800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058122	chr15	+	193	1	Intergenic	novelGene_1842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCAGGCACGGGTAGACA	NA	False	NA	NA	False	NA	NA	NA	76804331	76804524	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_76804300_76804500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058126	chr15	+	181	1	Intergenic	novelGene_1843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTTATTCCAGGGCTAG	NA	False	NA	NA	False	NA	NA	NA	76810225	76810406	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_76810200_76810400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058138	chr15	-	182	1	Intergenic	novelGene_1844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATCTGTAAGACATTTTA	NA	False	NA	NA	False	NA	NA	NA	76827886	76827704	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_76827700_76827900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058152	chr15	+	1109	4	FSM	ENSMUSG00000063236.7	ENSMUST00000230274.2	1111	4	8	-6	1	3	multi-exon	TRUE	canonical	1	74	junction_1	105.909814884594	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGTGTGAGAGAGAGAGT	NA	False	NA	27	True	AATAAA	-19	NA	76832729	76834935	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_76833120_76833267_76833353_76833743_76833891_76834448
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058156	chr15	-	181	1	Intergenic	novelGene_1845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTTGAAGGAAGGAAGGA	NA	False	NA	NA	False	NA	NA	NA	76873958	76873777	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_76873800_76874000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058170	chr15	+	197	1	Intergenic	novelGene_1846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATATTTAAGCAAATGAAT	NA	False	NA	NA	False	NA	NA	NA	77116848	77117045	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_77116800_77117000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058174	chr15	+	213	1	Intergenic	novelGene_1847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGTAGCTGAACCACTGA	NA	False	NA	NA	False	NA	NA	NA	77219324	77219537	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_77219300_77219500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058182	chr15	+	170	1	Intergenic	novelGene_1848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAGAAGCAAATAT	NA	False	NA	NA	False	NA	NA	NA	77225176	77225346	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_77225200_77225300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058193	chr15	+	198	1	Intergenic	novelGene_1849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGCATGGTCCAGGAATA	NA	False	NA	NA	False	TTTAAA	-9	NA	77236523	77236721	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_77236500_77236700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058197	chr15	-	199	1	Intergenic	novelGene_1850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTTCTTTTAAAAAAAAAT	3586	False	NA	NA	False	NA	NA	NA	77254084	77253885	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_77253900_77254100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058208	chr15	-	7423	41	FSM	ENSMUSG00000022443.18	ENSMUST00000016771.13	7433	41	12	-2	12	2	multi-exon	TRUE	canonical	3	307	junction_27	78.3427565254121	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGTCTGGGTGTTTGG	NA	False	NA	0	True	AATAAA	-19	NA	77726363	77644784	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680255_77681200_77681229_77692067_77692225_77697079_77697432_77726156
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058217	chr15	+	204	1	Intergenic	novelGene_1851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	300	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTATCAGCCCCTACAAAC	NA	False	NA	NA	False	NA	NA	NA	77717118	77717322	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_77717100_77717300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058227	chr15	+	195	1	Intergenic	novelGene_1852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTCCACTCCGAAGCATT	NA	False	NA	NA	False	NA	NA	NA	77728068	77728263	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_77728100_77728300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058238	chr15	+	224	1	Intergenic	novelGene_1853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAATGAAAACTCAAAGCG	4473	False	NA	NA	False	NA	NA	NA	77738105	77738329	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_77738100_77738300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058245	chr15	+	219	1	Intergenic	novelGene_1854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAACTAGTGAGGATTTC	NA	False	NA	NA	False	NA	NA	NA	77769968	77770187	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_77770000_77770200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058250	chr15	-	1301	4	FSM	ENSMUSG00000005354.17	ENSMUST00000005487.12	1298	4	-2	-1	-2	1	multi-exon	FALSE	canonical	3	1083	junction_2	92.120693778446	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCTGTTCTGTGGGCA	12	True	NA	-4	True	AATAAA	-20	NA	77813208	77799245	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_77800058_77808742_77808867_77811891_77812155_77813106
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058279	chr15	-	1923	15	FSM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	-20	-4	-20	4	multi-exon	FALSE	canonical	3	1461	junction_9	114.082520258677	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTGCTCCCGTTGTGA	2725	False	NA	-7	True	AATAAA	-28	NA	77855033	77843193	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854882
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058292	chr15	-	1849	15	NIC	ENSMUSG00000016554.10	novel	1899	15	NA	NA	103	-3	combination_of_known_junctions	FALSE	canonical	3	103	junction_14	427.115718201396	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTCGTCCTGTGCTCCC	3016	False	NA	-14	True	AATAAA	-21	NA	77854742	77843200	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854658
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058309	chr15	-	1650	2	FSM	ENSMUSG00000044986.11	ENSMUST00000058659.9	1144	2	-506	0	-506	0	multi-exon	FALSE	canonical	3	371	junction_1	0	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCTGCCTCCTTGCCC	7578	False	NA	-3	True	AATAAA	-17	NA	78290613	78283755	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_78284231_78289438
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058318	chr15	+	1263	2	FSM	ENSMUSG00000071711.13	ENSMUST00000229739.2	1311	2	57	-9	57	2	multi-exon	FALSE	canonical	3	16	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGTTGTGAGAATGTC	NA	False	NA	NA	False	AATAAA	-19	NA	78294238	78298215	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_78294865_78297578
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058323	chr15	+	3038	6	ISM	ENSMUSG00000033287.18	ENSMUST00000089414.12	1180	7	28	-394	-6	0	intron_retention	FALSE	canonical	3	64	junction_5	26.081411004775	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTTTCTCTGGGCCACT	NA	False	NA	24	True	AATAAA	-31	NA	78312855	78323503	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78321100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058341	chr15	-	164	1	Intergenic	novelGene_1855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	2442	False	NA	NA	False	NA	NA	NA	78393464	78393300	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_78393300_78393500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058344	chr15	-	1800	1	FSM	ENSMUSG00000068226.4	ENSMUST00000180449.2	441	1	-274	-1085	-274	1085	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTTTTAATGGTGTGAG	NA	False	NA	NA	False	NA	NA	NA	78439322	78437522	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_78437500_78439300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058351	chr15	-	1897	8	FSM	ENSMUSG00000018169.13	ENSMUST00000018313.6	1865	8	-31	-1	-31	1	multi-exon	FALSE	canonical	3	144	junction_5	11.4749060731561	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTCCAGCTTCCTGCTA	NA	False	NA	-3	True	ATTAAA	-18	NA	78657706	78640080	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_78640845_78641496_78641583_78643392_78643559_78645005_78645092_78648514_78648669_78651017_78651121_78651341_78651391_78657217
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058367	chr15	-	190	1	Intergenic	novelGene_1856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGGTTTTGAAAATATTAAA	NA	False	NA	NA	False	NA	NA	NA	78755147	78754957	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_78755000_78755100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058390	chr15	+	2554	18	FSM	ENSMUSG00000022436.17	ENSMUST00000001226.11	2375	18	-174	-5	-39	1	multi-exon	FALSE	canonical	3	356	junction_17	50.4832700370451	243	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACTGGCCAAACGAAAAC	4359	False	NA	88	True	AATAAA	-21	NA	78783928	78796252	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78795538
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058406	chr15	+	2024	2	FSM	ENSMUSG00000116165.2	ENSMUST00000089378.5	2001	2	-22	-1	-22	1	multi-exon	FALSE	canonical	3	228	junction_1	0	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGTGTGTGTGTGCCT	NA	False	NA	25	True	AATAAA	-19	NA	78798096	78803718	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_78798732_78802329
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058417	chr15	+	548	4	FSM	ENSMUSG00000068220.7	ENSMUST00000089377.6	800	4	1	251	0	23	multi-exon	FALSE	canonical	3	1912	junction_2	63.4367576584918	266	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTTTGTGTGTGTCTAT	NA	False	NA	32	True	AATAAA	-43	NA	78810925	78814414	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_78811005_78812169_78812250_78813832_78814005_78814197
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058424	chr15	+	957	6	FSM	ENSMUSG00000033099.11	ENSMUST00000138880.9	3721	6	-2	2766	-2	8	multi-exon	FALSE	canonical	3	420	junction_1	39.9929993873928	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTTGTGCTTTGTCCTG	NA	False	NA	18	True	NA	NA	NA	78819130	78825072	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_78819276_78820678_78820785_78821333_78821383_78822007_78822151_78824265_78824367_78824659
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058449	chr15	-	177	1	Intergenic	novelGene_1857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAGGTATCATGCT	NA	False	NA	NA	False	NA	NA	NA	78905643	78905466	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_78905500_78905600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058455	chr15	+	2059	1	FSM	ENSMUSG00000096210.3	ENSMUST00000180086.3	2055	1	0	-4	0	4	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGCGTTTTTCTTTAA	1147	False	NA	25	True	AATAAA	-21	NA	78912649	78914708	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_78912600_78914700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058461	chr15	+	1501	9	FSM	ENSMUSG00000006378.16	ENSMUST00000006544.9	2370	9	-20	889	-20	-889	multi-exon	FALSE	canonical	3	1189	junction_6	75.224663508719	327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTCTGCTTTATTCTG	612	False	NA	16	True	NA	NA	NA	78915053	78921664	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_78915321_78918130_78918262_78919159_78919262_78919456_78919604_78919976_78920132_78920219_78920303_78920466_78920639_78920952_78921075_78921342
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058475	chr15	-	1926	8	FSM	ENSMUSG00000033055.13	ENSMUST00000040676.11	1904	8	-22	0	-14	0	multi-exon	FALSE	canonical	3	102	junction_6	6.03391773769796	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTTTTTGTGTTTTTG	NA	False	NA	0	True	NA	NA	NA	78947107	78937293	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_78938285_78938695_78938804_78939491_78939617_78939694_78939743_78940213_78940286_78942154_78942254_78945363_78945412_78946672
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058488	chr15	+	1947	13	FSM	ENSMUSG00000033047.6	ENSMUST00000040518.6	1942	13	-4	-1	-4	1	multi-exon	FALSE	canonical	3	1651	junction_4	129.272537257102	1140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGTCTCATTATTATG	NA	False	NA	31	True	AGTAAA	-21	NA	78959374	78978606	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_78959493_78959970_78960020_78961030_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663_78974162_78977536_78977618_78978400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058495	chr15	+	584	5	FSM	ENSMUSG00000033020.8	ENSMUST00000230271.2	885	5	301	0	-41	0	multi-exon	FALSE	canonical	3	2023	junction_4	39.9335385359224	267	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGTTACCTGCGTGCTG	NA	False	NA	28	True	AATAAA	-22	NA	79025509	79035974	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_79025635_79028793_79028864_79030252_79030384_79035535_79035608_79035788
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058504	chr15	-	178	1	Intergenic	novelGene_1858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAAGAAAGCAAGCTGA	NA	False	NA	NA	False	NA	NA	NA	79073245	79073067	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_79073100_79073200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058512	chr15	+	1976	13	FSM	ENSMUSG00000068206.14	ENSMUST00000018295.14	1977	13	1	0	1	0	multi-exon	FALSE	canonical	3	173	junction_9	26.1878894826512	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGGGCTCCTTGCAATG	4384	False	NA	18	True	AATAAA	-18	NA	79113582	79133666	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_79113771_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058531	chr15	-	3546	17	FSM	ENSMUSG00000042632.18	ENSMUST00000174021.8	3318	17	-228	0	11	0	multi-exon	FALSE	canonical	3	78	junction_16	39.721638860324	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGTACAGTGTGTGC	NA	False	NA	-10	True	AATAAA	-16	NA	79212392	79170427	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058536	chr15	-	3032	17	NIC	ENSMUSG00000042632.18	novel	3318	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_16	39.5790348543266	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGTACAGTGTGTGC	NA	False	NA	-10	True	AATAAA	-16	NA	79212453	79170427	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79212409
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058540	chr15	-	2870	16	NIC	ENSMUSG00000042632.18	novel	2943	17	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	51.8533830461748	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGTACAGTGTGTGC	NA	False	NA	-10	True	AATAAA	-16	NA	79212456	79170427	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79212409
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058563	chr15	-	183	1	Intergenic	novelGene_1859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAAGAAGGTGTG	NA	False	NA	-1	True	NA	NA	NA	79211018	79210835	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_79210800_79211000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058582	chr15	-	3363	9	FSM	ENSMUSG00000009035.16	ENSMUST00000074991.10	3627	9	265	-1	-28	1	multi-exon	FALSE	canonical	3	271	junction_8	29.0298876160415	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTGCCAGCGAGGTTT	NA	False	NA	-2	True	AATATA	-35	NA	79287504	79244882	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287384
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058595	chr15	-	2658	11	NIC	ENSMUSG00000022433.22	novel	1392	11	NA	NA	17	4	combination_of_known_junctions	FALSE	canonical	3	24	junction_10	159.216487839671	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTGTCTGCCTCTTTGC	8036	False	NA	0	True	AATAAA	-28	NA	79326320	79302051	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326292
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058597	chr15	-	2787	11	FSM	ENSMUSG00000022433.22	ENSMUST00000117786.9	2695	11	-88	-4	49	4	multi-exon	TRUE	canonical	3	59	junction_10	149.550794046705	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTGTCTGCCTCTTTGC	8068	False	NA	0	True	AATAAA	-28	NA	79326288	79302051	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323056_79326127
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058598	chr15	-	2797	11	FSM	ENSMUSG00000022433.22	ENSMUST00000120859.9	1392	11	-91	-1314	43	4	multi-exon	FALSE	canonical	3	332	junction_10	81.5738315883225	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTGTCTGCCTCTTTGC	8062	False	NA	0	True	AATAAA	-28	NA	79326294	79302051	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058636	chr15	+	170	1	Intergenic	novelGene_1860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAGATTGGAATA	251	False	NA	NA	False	NA	NA	NA	79347888	79348058	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_79347900_79348100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058665	chr15	-	4570	13	FSM	ENSMUSG00000055065.8	ENSMUST00000229877.2	4726	13	156	0	-26	0	multi-exon	FALSE	canonical	3	55	junction_12	13.0064086767511	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTGAATTTTTTATTACA	NA	False	NA	-40	True	AATAAA	-15	NA	79430786	79411936	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_79414719_79415878_79416116_79420157_79420218_79421197_79421260_79421635_79421747_79422759_79422933_79423018_79423180_79423519_79423662_79424613_79424680_79425234_79425369_79426687_79426788_79427906_79428058_79430395
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058666	chr15	-	4550	13	FSM	ENSMUSG00000055065.8	ENSMUST00000054014.9	4732	13	182	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	13.6714930502203	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTGAATTTTTTATTACA	NA	False	NA	-40	True	AATAAA	-15	NA	79430760	79411936	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_79414719_79415872_79416116_79420157_79420218_79421197_79421260_79421635_79421747_79422759_79422933_79423018_79423180_79423519_79423662_79424613_79424680_79425234_79425369_79426687_79426788_79427906_79428058_79430395
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058675	chr15	+	204	1	Intergenic	novelGene_1861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATTAAAACCCATTTAAAA	4272	False	NA	NA	False	NA	NA	NA	79433255	79433459	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_79433300_79433500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058682	chr15	+	192	1	Intergenic	novelGene_1862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACATGGACTCCAAAGGT	NA	False	NA	NA	False	NA	NA	NA	79480200	79480392	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_79480200_79480400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058699	chr15	+	197	1	Intergenic	novelGene_1863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTCATCCTAGCTCCCT	NA	False	NA	NA	False	NA	NA	NA	79498156	79498353	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_79498200_79498400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058705	chr15	+	1135	5	FSM	ENSMUSG00000022428.9	ENSMUST00000023064.9	1147	5	14	-2	14	2	multi-exon	FALSE	canonical	3	177	junction_3	15.1224171348366	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGTGTAGCAAAAATAGAT	9573	False	NA	NA	False	ATTAAA	-16	NA	79543413	79551863	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_79543495_79545571_79545726_79549846_79549953_79550031_79550151_79551188
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058713	chr15	+	1041	4	FSM	ENSMUSG00000022427.5	ENSMUST00000023062.5	1569	4	1	527	1	193	multi-exon	FALSE	canonical	3	903	junction_3	55.9305124437656	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTGTTTGTGGTAGTA	8179	False	NA	27	True	ATTAAA	-23	NA	79555062	79557074	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_79555210_79555373_79555493_79556097_79556216_79556417
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058722	chr15	-	3421	4	FSM	ENSMUSG00000022426.7	ENSMUST00000023061.7	3440	4	24	-5	24	5	multi-exon	FALSE	canonical	3	116	junction_1	10.9848380355227	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTACTTGTCTGATTATGT	NA	False	NA	2	True	ATTAAA	-20	NA	79572096	79558446	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_79560381_79561297_79561493_79561599_79561729_79570933
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058746	chr15	-	1433	4	FSM	ENSMUSG00000022420.17	ENSMUST00000023055.8	1472	4	39	0	-12	0	multi-exon	FALSE	canonical	3	65	junction_3	38.6091526281874	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTCTGTGGTGTATTGA	282	False	NA	NA	False	ATTAAA	-17	NA	79658629	79645653	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_79646727_79647710_79647795_79649016_79649223_79658559
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058753	chr15	-	1538	5	ISM	ENSMUSG00000022420.17	ENSMUST00000162713.9	1357	7	2506	-684	1	0	3prime_fragment	FALSE	canonical	3	63	junction_3	39.8591269347436	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTCTGTGGTGTATTGA	244	False	NA	NA	False	ATTAAA	-17	NA	79658667	79645653	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr15_-_79646727_79647710_79647795_79649016_79649223_79649987_79650055_79658559
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058758	chr15	-	4966	5	FSM	ENSMUSG00000022421.21	ENSMUST00000175858.10	4948	5	-17	-1	-17	0	multi-exon	FALSE	canonical	3	12	junction_4	7.59522876548166	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGCTCTTCTGTCATATG	NA	False	NA	-1	True	AATAAA	-17	NA	79688927	79670551	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_79674118_79674466_79674647_79676803_79677052_79678456_79678677_79688175
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058768	chr15	-	5353	5	FSM	ENSMUSG00000089715.13	ENSMUST00000109627.8	5806	5	451	2	0	-2	multi-exon	FALSE	canonical	3	119	junction_1	17.0367250374008	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCAGCCCCCTGGATGG	NA	False	NA	-6	True	AATAAA	-20	NA	79718438	79708098	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_79713180_79717712_79717780_79717902_79717969_79718115_79718160_79718343
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058777	chr15	+	194	1	Intergenic	novelGene_1864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAATAAATTCTCGTG	NA	False	NA	NA	False	NA	NA	NA	79727075	79727269	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_79727100_79727300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058784	chr15	+	191	1	Intergenic	novelGene_1865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAAGTCCGCCTCAACAG	1826	False	NA	NA	False	NA	NA	NA	79735792	79735983	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_79735800_79736000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058813	chr15	-	2997	7	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-9	6	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_1	148.84294481843	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79855329	79800001	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_-_79802252_79802440_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058816	chr15	-	2961	7	NIC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-10	6	combination_of_known_junctions	FALSE	canonical	3	156	junction_1	121.853737461488	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79855330	79800001	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_79802252_79802477_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058841	chr15	-	3188	6	FSM	ENSMUSG00000053411.17	ENSMUST00000132821.8	528	6	-12	-2648	-11	6	multi-exon	FALSE	canonical	3	258	junction_5	93.730251253264	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79855331	79800001	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058843	chr15	-	5732	5	NIC	ENSMUSG00000053411.17	novel	663	6	NA	NA	-9	6	intron_retention	FALSE	canonical	3	258	junction_4	92.290302849216	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79855329	79800001	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_79802678_79802953_79805640_79807672_79807739_79814786_79814831_79855069
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058888	chr15	+	188	1	Intergenic	novelGene_1866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGTTTGTGGCACACTT	NA	False	NA	NA	False	NA	NA	NA	79807118	79807306	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_79807100_79807300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058892	chr15	+	3923	1	Intergenic	novelGene_1867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAACTTACTTGGTAGGCA	NA	False	NA	NA	False	NA	NA	NA	79810491	79814414	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_79810500_79814400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058911	chr15	-	1474	10	NIC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	214	junction_7	9920.80080773053	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3570	False	NA	-6	True	AATAAA	-12	NA	79967555	79961996	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965413_79965815_79965985_79966590_79966784_79967524
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058912	chr15	-	1878	9	FSM	ENSMUSG00000060036.15	ENSMUST00000187578.2	1877	9	-2	1	-2	-1	multi-exon	FALSE	canonical	3	16287	junction_8	5123.08483118326	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3569	False	NA	-6	True	AATAAA	-12	NA	79967556	79961996	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965985_79966590_79966784_79967524
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058914	chr15	-	1987	9	NIC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	1	-1	intron_retention	FALSE	canonical	3	214	junction_6	10244.8949482169	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964754_79965096_79965413_79965815_79965985_79966590_79966784_79967524
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058921	chr15	-	2393	8	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	16287	junction_7	5307.90272968101	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3569	False	NA	-6	True	AATAAA	-12	NA	79967556	79961996	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964754_79965096_79965985_79966590_79966784_79967524
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058923	chr15	-	3271	7	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	1	-1	intron_retention	FALSE	canonical	3	16287	junction_6	5523.20271420688	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79964754_79965096_79965985_79966590_79966784_79967524
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058953	chr15	-	5557	1	FSM	ENSMUSG00000105167.4	ENSMUST00000199549.4	108	1	-398	-5051	-398	5051	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_79962000_79967600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058970	chr15	+	4182	4	FSM	ENSMUSG00000022415.13	ENSMUST00000009727.12	4180	4	-2	0	-2	0	multi-exon	FALSE	canonical	3	37	junction_3	626.014554321401	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCTGTGTCACTGTGTT	NA	False	NA	20	True	AATAAA	-20	NA	79975542	80003702	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_79975694_79994644_79994883_79995799_79995946_80000055
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058991	chr15	+	201	1	Intergenic	novelGene_1868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTCTTTCCTGGGGCTGA	NA	False	NA	NA	False	NA	NA	NA	80005068	80005269	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_80005100_80005300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000058999	chr15	+	195	1	Intergenic	novelGene_1869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGTGGGGGCAGGGGGG	NA	False	NA	NA	False	NA	NA	NA	80006424	80006619	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_80006400_80006600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059060	chr15	+	1439	3	FSM	ENSMUSG00000042406.9	ENSMUST00000109605.5	1725	3	290	-4	-49	4	multi-exon	FALSE	canonical	3	1292	junction_2	43	645	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGTTTTCAGTGTCATT	4435	False	NA	36	True	AATAAA	-24	NA	80139674	80141746	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_80139887_80140407_80140723_80140834
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059089	chr15	+	204	1	Intergenic	novelGene_1870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGGAGAGAATTCTATA	9821	False	NA	NA	False	NA	NA	NA	80588200	80588404	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_80588200_80588400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059097	chr15	+	221	1	Intergenic	novelGene_1871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAATTGCTTTTCTCTTGC	8384	False	NA	NA	False	AATATA	-12	NA	80620144	80620365	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_80620100_80620400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059102	chr15	+	203	1	Intergenic	novelGene_1872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACCTAGGAAAGAGATT	NA	False	NA	NA	False	NA	NA	NA	80754625	80754828	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_80754600_80754800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059112	chr15	+	2069	13	FSM	ENSMUSG00000022407.11	ENSMUST00000023043.10	3711	13	2	1640	1	187	multi-exon	FALSE	canonical	3	932	junction_8	68.052471585453	499	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTTTTATATTTTT	NA	False	NA	5	True	NA	NA	NA	80832692	80853507	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059133	chr15	-	189	1	Intergenic	novelGene_1873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGCTGAGCCACCTCTC	NA	False	NA	NA	False	NA	NA	NA	80872426	80872237	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_80872200_80872400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059146	chr15	+	206	1	Intergenic	novelGene_1874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTGCATAGTATCATATT	NA	False	NA	6	True	NA	NA	NA	80888920	80889126	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_80888900_80889100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059162	chr15	+	198	1	Intergenic	novelGene_1875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	80921340	80921538	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_80921300_80921500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059167	chr15	+	214	1	Intergenic	novelGene_1876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTCAGCTACTCCCTAAT	7493	False	NA	NA	False	NA	NA	NA	81197993	81198207	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_81198000_81198200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059174	chr15	-	1721	9	FSM	ENSMUSG00000022404.9	ENSMUST00000023040.9	1724	9	3	0	3	0	multi-exon	FALSE	canonical	3	302	junction_6	19.7638400873919	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAAAGTTGCTCTTGATT	6851	False	NA	-10	True	AATAAA	-27	NA	81245010	81203111	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_81203978_81207810_81207894_81211241_81211338_81211417_81211564_81213250_81213368_81222136_81222289_81224174_81224242_81228301_81228363_81244877
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059183	chr15	+	186	1	Intergenic	novelGene_1877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAACCTCTGATTTTATCA	NA	False	NA	NA	False	NA	NA	NA	81210739	81210925	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_81210700_81210900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059200	chr15	+	204	1	Antisense	novelGene_ENSMUSG00000022403.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCACATATATAAAAATGG	9191	False	NA	NA	False	AAGAAA	-7	NA	81268459	81268663	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr15_+_81268500_81268700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059214	chr15	+	205	1	Intergenic	novelGene_1878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGCATTTAAGATGCAT	NA	False	NA	NA	False	NA	NA	NA	81287280	81287485	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_81287300_81287500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059220	chr15	+	187	1	Intergenic	novelGene_1879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGTTCAAGATTTGAC	242	False	NA	NA	False	NA	NA	NA	81302039	81302226	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_81302000_81302200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059238	chr15	+	478	5	FSM	ENSMUSG00000022400.10	ENSMUST00000230062.2	651	5	48	125	48	-125	multi-exon	FALSE	canonical	3	348	junction_1	1851.90407081468	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTTGCTGTTTCATGTA	NA	False	NA	15	True	AATAAA	-15	NA	81350889	81359462	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_81350956_81352355_81352435_81355152_81355224_81358043_81358130_81359286
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059251	chr15	-	176	1	Intergenic	novelGene_1880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTACTTTTTAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	81437619	81437443	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_81437400_81437600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059266	chr15	+	186	1	Intergenic	novelGene_1881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATTTGCTTTATGAAAAC	NA	False	NA	NA	False	NA	NA	NA	81544838	81545024	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_81544800_81545000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059313	chr15	+	201	1	Intergenic	novelGene_1882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTGAGAAGTGTGGCC	8246	False	NA	NA	False	NA	NA	NA	81597200	81597401	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_81597200_81597400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059321	chr15	+	5734	23	FSM	ENSMUSG00000022390.12	ENSMUST00000109554.3	5740	23	15	-9	15	9	multi-exon	TRUE	canonical	3	112	junction_21	52.4698457282257	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTTGTTCTATAGAATAT	1963	False	NA	13	True	AATAAA	-24	NA	81629272	81680470	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225_81667408_81670082_81670169_81676132_81676267_81676430_81676537_81676663_81676773_81676980_81677115_81677220_81677385_81677701
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059325	chr15	+	2338	18	NNC	ENSMUSG00000022390.12	novel	5740	23	NA	NA	16	2184	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_17	51.2595674249711	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAATAGGGCATGATGGCA	1964	False	NA	NA	False	NA	NA	NA	81629273	81670841	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225_81667408_81670082_81670169_81670820
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059341	chr15	+	4189	4	FSM	ENSMUSG00000022389.16	ENSMUST00000023024.8	4079	4	55	-165	55	0	multi-exon	FALSE	canonical	3	69	junction_3	7.84573486395988	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCAGTGGTCTTTTCTG	NA	False	NA	17	True	ATTAAA	-17	NA	81695669	81711064	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_81695922_81699144_81699463_81705399_81705621_81707666
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059349	chr15	-	3983	2	FSM	ENSMUSG00000048546.9	ENSMUST00000050467.9	4151	2	168	0	6	0	multi-exon	FALSE	canonical	3	45	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCTGCCTACTTGTTTG	NA	False	NA	-8	True	ATTAAA	-17	NA	81742518	81732472	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_81736074_81742136
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059354	chr15	-	867	4	FSM	ENSMUSG00000061360.9	ENSMUST00000023117.10	1663	4	-1	797	-1	152	multi-exon	FALSE	canonical	3	1228	junction_3	69.0426599204354	286	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAACGTCTACTTTTAG	NA	False	NA	-4	True	AATAAA	-22	NA	81756113	81749517	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_81750094_81754532_81754700_81755366_81755391_81756013
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059379	chr15	-	1470	6	FSM	ENSMUSG00000022476.9	ENSMUST00000023113.7	2542	6	22	1050	22	322	multi-exon	FALSE	canonical	3	251	junction_5	12.0432553738597	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCCTTTTCATTAGCTG	450	False	NA	2	True	AATAAA	-21	NA	81810419	81800279	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_81800867_81801400_81801603_81802468_81802533_81802875_81802963_81806609_81806707_81809986
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059389	chr15	+	202	1	Intergenic	novelGene_1883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACACTTCCCAGTGTCCC	4268	False	NA	NA	False	TTTAAA	-5	NA	81807067	81807269	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_81807100_81807300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059397	chr15	-	1260	8	FSM	ENSMUSG00000022474.16	ENSMUST00000023112.12	1300	8	42	-2	-19	2	multi-exon	FALSE	canonical	3	940	junction_3	83.919543587405	405	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTTTGCTCTGTCTG	NA	False	NA	-1	True	ATTAAA	-16	NA	81845089	81835306	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_81835814_81836124_81836241_81836925_81837002_81839849_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059417	chr15	+	188	1	Intergenic	novelGene_1884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAGAGATTTAAAA	6596	False	NA	NA	False	NA	NA	NA	81842489	81842677	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_81842500_81842700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059429	chr15	+	1025	1	FSM	ENSMUSG00000061633.4	ENSMUST00000074608.4	1024	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGAGTGCATTCTTAAAT	6326	False	NA	10	True	AATAAA	-18	NA	81864740	81865765	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_81864700_81865800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059438	chr15	-	2982	6	FSM	ENSMUSG00000022472.17	ENSMUST00000152227.8	2934	6	-48	0	14	0	multi-exon	FALSE	canonical	3	162	junction_5	9.30806102257608	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGTAAGTTGCTTGA	NA	False	NA	-9	True	AATAAA	-16	NA	81900412	81876723	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_81879047_81882310_81882434_81883705_81883816_81886741_81886812_81887958_81887981_81900078
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059448	chr15	+	2118	13	FSM	ENSMUSG00000022471.15	ENSMUST00000069530.13	2114	13	3	-7	3	7	multi-exon	TRUE	canonical	3	579	junction_9	64.3868516598433	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTTTCAGTATGAATGGG	NA	False	NA	36	True	AATAAA	-22	NA	81900572	81924293	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_81900677_81901310_81901400_81903181_81903295_81906645_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763_81913926_81915333_81915464_81919877_81919979_81921657_81921772_81923922
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059454	chr15	+	2002	12	NIC	ENSMUSG00000022471.15	novel	2114	13	NA	NA	21	-1	combination_of_known_splicesites	FALSE	canonical	3	28	junction_1	190.783291885872	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGTGCACTTTTCAGT	NA	False	NA	27	True	AATAAA	-13	NA	81900590	81924284	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_+_81900677_81903181_81903295_81906645_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763_81913926_81915333_81915464_81919877_81919979_81921657_81921772_81923922
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059462	chr15	-	1284	3	FSM	ENSMUSG00000063480.9	ENSMUST00000080622.9	2077	3	-1	794	-1	159	multi-exon	FALSE	canonical	3	3045	junction_2	110	217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAGTTTTATCAGCTAA	4905	False	NA	-1	True	AATGAA	-20	NA	81931800	81925519	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_81926570_81928097_81928219_81931687
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059471	chr15	+	197	1	Intergenic	novelGene_1885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAAAAATCAGTGAAATG	NA	False	NA	NA	False	NA	NA	NA	81962483	81962680	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_81962500_81962700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059480	chr15	-	211	1	Intergenic	novelGene_1886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCAGAATGAGGGAGTTC	NA	False	NA	NA	False	NA	NA	NA	82002536	82002325	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_82002300_82002500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059485	chr15	+	2048	7	FSM	ENSMUSG00000068114.8	ENSMUST00000089174.6	2046	7	-2	0	-2	0	multi-exon	FALSE	canonical	3	36	junction_2	6.64371047599825	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTCTTTGGCTTCTTTT	NA	False	NA	25	True	AATAAA	-36	NA	82012120	82026404	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_82012251_82014252_82014372_82015624_82015747_82015945_82016031_82018781_82018964_82019270_82019343_82025066
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059502	chr15	+	5026	19	FSM	ENSMUSG00000022463.9	ENSMUST00000023100.8	5077	19	56	-5	-9	5	multi-exon	FALSE	canonical	3	437	junction_18	78.7541886011292	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTGAGTCTGTAGTA	2229	False	NA	30	True	AATAAA	-26	NA	82031437	82089585	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059504	chr15	+	2008	4	FSM	ENSMUSG00000022463.9	ENSMUST00000230105.2	1981	4	-13	-14	-8	14	multi-exon	FALSE	canonical	3	662	junction_2	39.6176167324027	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGAAGTGTGACTGTGC	2230	False	NA	NA	False	NA	NA	NA	82031438	82058109	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059516	chr15	+	4037	18	NNC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	3	-2009	intron_retention	FALSE	canonical	3	12	junction_17	162.450737808521	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTCCTCAAGAAGACAGA	2246	False	NA	NA	False	NA	NA	NA	82031454	82086011	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82085183
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059548	chr15	-	177	1	Intergenic	novelGene_1887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCCCTCTGTGGACTGT	NA	False	NA	NA	False	NA	NA	NA	82102784	82102607	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_82102600_82102800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059561	chr15	-	907	6	FSM	ENSMUSG00000068101.12	ENSMUST00000089157.11	1202	6	-2	297	-2	3	multi-exon	FALSE	canonical	3	1067	junction_2	108.849253557386	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTGTAGATGCAGAAAC	NA	False	NA	-14	True	AAAAAG	-17	NA	82128951	82118276	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333_82128414_82128823
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059571	chr15	-	182	1	Intergenic	novelGene_1888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATCTTGGGAGTGGGGAG	NA	False	NA	NA	False	NA	NA	NA	82129368	82129186	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_82129200_82129400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059575	chr15	+	2590	11	NIC	ENSMUSG00000022456.19	novel	1888	12	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_10	9.47048045243746	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGGTCTTTGTCTTAT	NA	False	NA	NA	False	ACTAAA	-21	NA	82159427	82178775	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_+_82159688_82163615_82163808_82167259_82167389_82167877_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173395_82173496_82174604_82174657_82174938_82175033_82177446
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059577	chr15	+	5003	10	FSM	ENSMUSG00000022456.19	ENSMUST00000023095.14	4992	10	-11	0	-11	0	multi-exon	FALSE	canonical	3	32	junction_7	5.9087714668037	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGGTCTTTGTCTTAT	NA	False	NA	NA	False	ACTAAA	-21	NA	82159428	82178775	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_82159688_82163615_82163808_82167259_82167389_82167877_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173395_82173496_82174604_82174657_82174938
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059596	chr15	+	609	3	NNC	ENSMUSG00000022452.17	novel	705	3	NA	NA	6	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	801.5	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGTCCCCATTTCTCACT	NA	False	NA	38	True	AATAAA	-20	NA	82230220	82233268	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_+_82230471_82232100_82232242_82233050
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059597	chr15	+	614	3	FSM	ENSMUSG00000022452.17	ENSMUST00000023086.15	705	3	66	25	6	6	multi-exon	FALSE	canonical	3	1353	junction_2	125	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCGTCCCCATTTCTCA	NA	False	NA	36	True	AATAAA	-18	NA	82230220	82233266	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_82230471_82232100_82232242_82233043
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059627	chr15	-	1783	4	NIC	ENSMUSG00000041852.16	novel	7417	5	NA	NA	12	-11	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	61.3568795382121	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTTTTCATTTACTCT	9180	False	NA	-16	True	AATAAA	-17	NA	82784000	82692647	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_82693989_82699811_82699862_82709431_82709526_82783702
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059636	chr15	+	190	1	Intergenic	novelGene_1889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTATATGGAATGGGTT	NA	False	NA	NA	False	NA	NA	NA	82719234	82719424	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_82719200_82719400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059641	chr15	+	274	1	Intergenic	novelGene_1890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTATTACTTCAACCCCCA	NA	False	NA	NA	False	TTTAAA	-3	NA	82755826	82756100	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_82755800_82756100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059643	chr15	+	232	1	Intergenic	novelGene_1891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCCAAAACACCAACGAAGT	NA	False	NA	NA	False	NA	NA	NA	82763263	82763495	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_82763300_82763500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059660	chr15	+	204	1	Intergenic	novelGene_1892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	761	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCAAGGCTTTGACCACG	872	False	NA	NA	False	NA	NA	NA	82899943	82900147	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_82899900_82900100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059673	chr15	-	1922	7	FSM	ENSMUSG00000018040.10	ENSMUST00000018184.10	4363	7	29	2412	-21	3	multi-exon	FALSE	canonical	3	832	junction_3	73.7437379639037	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTCTCCTGAGCTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	83006973	83000045	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_83001173_83001749_83001949_83002277_83002376_83003385_83003504_83004092_83004219_83006032_83006176_83006862
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059678	chr15	-	2278	7	NIC	ENSMUSG00000018040.10	novel	4363	7	NA	NA	0	2	intron_retention	FALSE	canonical	3	4	junction_4	345.598233341678	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTCTCCTGAGCTCT	NA	False	NA	NA	False	AATAAA	-15	NA	83006952	83000046	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_83001173_83001749_83001949_83002277_83002376_83003385_83003504_83003714_83004219_83006032_83006176_83006862
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059687	chr15	-	3290	9	FSM	ENSMUSG00000041815.15	ENSMUST00000058793.14	3299	9	15	-6	15	6	multi-exon	FALSE	canonical	3	462	junction_6	74.2839779158332	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATAATGTCTTTTTTCAT	NA	False	NA	-5	True	AATAAA	-23	NA	83033570	83010170	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83021668_83021756_83022332_83022724_83033395
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059697	chr15	-	3172	8	FSM	ENSMUSG00000041815.15	ENSMUST00000100375.11	3157	8	-13	-2	-8	0	multi-exon	FALSE	canonical	3	86	junction_6	194.457277192347	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGCTATAATGTCTTT	NA	False	NA	-11	True	AATAAA	-17	NA	83033545	83010176	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83022332_83022724_83033395
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059709	chr15	+	223	1	Intergenic	novelGene_1893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTACATGTTATGAAAGGAA	1261	False	NA	NA	False	TTTAAA	-6	NA	83034704	83034927	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_83034700_83034900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059713	chr15	-	2080	9	FSM	ENSMUSG00000018042.19	ENSMUST00000018186.16	2422	9	342	0	342	0	multi-exon	FALSE	canonical	3	1513	junction_1	61.7454451761423	498	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCAGCGTTTCTCTGGG	NA	False	NA	0	True	AGTAAA	-18	NA	83056451	83037694	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83046050_83046158_83046432_83046506_83050275_83050408_83056312
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059726	chr15	-	2136	3	FSM	ENSMUSG00000047878.14	ENSMUST00000049530.14	2092	3	-39	-5	-39	5	multi-exon	FALSE	canonical	3	57	junction_2	20.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCATGGTCACATCGTG	2184	False	NA	-3	True	AATAAA	-21	NA	83136014	83110917	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_83112796_83114714_83114859_83135900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059742	chr15	-	2131	3	FSM	ENSMUSG00000047878.14	ENSMUST00000164614.3	1974	3	1	-158	-1	0	multi-exon	FALSE	canonical	3	30	junction_2	34	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATGCCTCATGGTCACA	2267	False	NA	-8	True	AATAAA	-16	NA	83135931	83110922	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_83112796_83114714_83114859_83135817
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059751	chr15	+	192	1	Intergenic	novelGene_1894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATACGAATGCCTCTGCC	5579	False	NA	NA	False	NA	NA	NA	83127816	83128008	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_83127800_83128000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059755	chr15	+	205	1	Intergenic	novelGene_1895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACTTGGCAAATCCCAG	NA	False	NA	NA	False	NA	NA	NA	83133363	83133568	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_83133400_83133600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059762	chr15	-	2600	16	FSM	ENSMUSG00000054277.9	ENSMUST00000067215.9	2619	16	19	0	19	0	multi-exon	FALSE	canonical	3	20	junction_9	11.3927852413515	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGTTGCCTGTGTTGTCA	3544	False	NA	-26	True	AATATA	-16	NA	83234429	83183939	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_83184904_83187303_83187426_83191081_83191173_83192253_83192378_83194450_83194586_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208352_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059766	chr15	-	154	1	Intergenic	novelGene_1896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGTGAAGTAAGCTCAC	NA	False	NA	NA	False	AATAAA	-20	NA	83237999	83237845	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_83237800_83238000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059774	chr15	-	6187	4	NIC	ENSMUSG00000075511.10	novel	2270	4	NA	NA	2	198	intron_retention	FALSE	canonical	3	20	junction_1	14.2672897060218	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTGTTGTGAAGTAAGC	247	False	NA	NA	False	AATAAA	-16	NA	83251481	83237849	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_83243152_83248020_83248130_83249229_83249715_83251190
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059792	chr15	-	3196	11	FSM	ENSMUSG00000016664.17	ENSMUST00000171436.8	3693	11	-18	515	-18	0	multi-exon	FALSE	canonical	3	507	junction_5	57.2486681067778	424	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCCTTGCATCCACCC	7089	False	NA	0	True	AATAAA	-27	NA	83348825	83260322	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83348659
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059819	chr15	-	2065	12	FSM	ENSMUSG00000022442.17	ENSMUST00000016897.12	2060	12	-5	0	-5	0	multi-exon	FALSE	canonical	3	63	junction_11	7.21110255092798	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACTTTATCTTATTATT	NA	False	NA	NA	False	NA	NA	NA	83395099	83367969	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_83368515_83373669_83373834_83376743_83376831_83380472_83380617_83381520_83381630_83382352_83382488_83384122_83384304_83386281_83386491_83389450_83389568_83389683_83389845_83390480_83390529_83394934
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059832	chr15	-	1925	4	FSM	ENSMUSG00000048755.10	ENSMUST00000061882.10	1917	4	-8	0	-8	0	multi-exon	FALSE	canonical	3	138	junction_2	37.1423687391577	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTCTCTCTCTCTGTG	8043	False	NA	0	True	AATAAA	-23	NA	83439944	83430997	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_83432144_83433318_83433537_83436734_83436823_83439471
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059836	chr15	+	869	4	FSM	ENSMUSG00000041736.8	ENSMUST00000047419.8	837	4	-32	0	-32	0	multi-exon	FALSE	canonical	3	179	junction_1	54.5119762580257	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTCTGTACTTAGTGGA	NA	False	NA	21	True	AATAAA	-21	NA	83447760	83458404	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_83447846_83455585_83455797_83456400_83456540_83457970
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059846	chr15	+	886	4	NNC	ENSMUSG00000041736.8	novel	837	4	NA	NA	6062	-7	at_least_one_novel_splicesite	FALSE	canonical	3	99	junction_1	92.1013934024164	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAACAGACTCTGTACT	NA	False	NA	14	True	AATAAA	-14	NA	83454137	83458397	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_+_83454247_83455585_83455797_83456400_83456540_83457970
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059857	chr15	-	3267	14	FSM	ENSMUSG00000016757.12	ENSMUST00000016901.5	3774	14	-45	552	-45	-523	multi-exon	FALSE	canonical	3	239	junction_9	15.0977093760069	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTTTTCTCTTTGGG	4626	False	NA	-1	True	AGTAAA	-17	NA	83479403	83459842	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_83461250_83461947_83462087_83462835_83462905_83464268_83464351_83464695_83464848_83465868_83465981_83466245_83466441_83466546_83466664_83468856_83468934_83471051_83471186_83471274_83471435_83472703_83472903_83475579_83475750_83479149
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059862	chr15	-	188	1	Intergenic	novelGene_1897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTTTTACATCACTTCT	NA	False	NA	NA	False	NA	NA	NA	83897535	83897347	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_83897300_83897500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059863	chr15	-	2385	8	FSM	ENSMUSG00000018865.10	ENSMUST00000229826.2	1319	8	-18	-1048	-18	0	multi-exon	FALSE	canonical	3	60	junction_2	10.0285307284481	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTTGTCTGTGTGC	NA	False	NA	-1	True	AATAAA	-17	NA	83989828	83960297	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_83961784_83962969_83963099_83964387_83964527_83970800_83970896_83974159_83974287_83974792_83974874_83976490_83976622_83989631
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059876	chr15	+	2975	9	NNC	ENSMUSG00000041653.6	novel	1313	8	NA	NA	-27	2283	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	14.5425023637612	23	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTCTCTGTCTCTTCTG	NA	False	NA	10	True	AATAAA	-45	NA	84052010	84073720	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_+_84052262_84055282_84055516_84056916_84056983_84058468_84058679_84061016_84061078_84063380_84063537_84065120_84065254_84070177_84070283_84071960
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059887	chr15	+	1692	15	FSM	ENSMUSG00000022437.8	ENSMUST00000023071.8	4629	15	-20	2957	-20	-2957	multi-exon	FALSE	canonical	3	1573	junction_6	135.39963524504	570	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGATGTGGTCTGTTTT	NA	False	NA	34	True	AATAAA	-20	NA	84076421	84098511	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_84076586_84079944_84080056_84081205_84081308_84082774_84082863_84083973_84084081_84084493_84084625_84084830_84084919_84086430_84086560_84086969_84087042_84088209_84088297_84091071_84091143_84092033_84092102_84094684_84094832_84095237_84095380_84098326
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059898	chr15	+	3769	13	FSM	ENSMUSG00000022438.7	ENSMUST00000023072.7	3784	13	14	1	-9	-1	multi-exon	FALSE	canonical	3	64	junction_4	7.38052994182818	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTGTGCTTTGATCAGAC	NA	False	NA	78	True	AATAAA	-15	NA	84116257	84199888	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_84116388_84155431_84155522_84157699_84157771_84166962_84167066_84174587_84174729_84176982_84177099_84179757_84179817_84182166_84182187_84187608_84187671_84188035_84188105_84193053_84193156_84196903_84196977_84197155
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059906	chr15	-	186	1	Intergenic	novelGene_1898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAGGAGAAAAAAATACAGT	4444	False	NA	NA	False	NA	NA	NA	84127626	84127440	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_84127400_84127600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059912	chr15	-	190	1	Intergenic	novelGene_1899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGATAGTACTCATATAT	9265	False	NA	NA	False	NA	NA	NA	84173801	84173611	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_84173600_84173800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059920	chr15	-	176	1	Intergenic	novelGene_1900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAGTCTAAAAAAGA	NA	False	NA	-1	True	NA	NA	NA	84413186	84413010	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_84413000_84413200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059928	chr15	+	1686	9	NNC	ENSMUSG00000036106.16	novel	1830	8	NA	NA	-6411	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	42.0979141407267	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTCTGCCCCCTGGTG	8459	False	NA	5	True	AATAAA	-15	NA	84547409	84587874	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_+_84547463_84565400_84565521_84572103_84572185_84577664_84577714_84577959_84578018_84583321_84583414_84583791_84583933_84585564_84585701_84586918
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059953	chr15	+	4796	8	FSM	ENSMUSG00000016619.11	ENSMUST00000165443.4	4766	8	-29	-1	-29	1	multi-exon	FALSE	canonical	3	399	junction_4	38.703477668983	425	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGGGTACTGTTCTGTTC	NA	False	NA	20	True	AATAAA	-20	NA	84807582	84827165	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_84807852_84811568_84811648_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059972	chr15	-	2811	10	FSM	ENSMUSG00000036046.15	ENSMUST00000165743.2	5032	10	-56	2277	-27	3	multi-exon	FALSE	canonical	3	237	junction_4	21.5893206338712	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTCAGTTTGCCCAC	NA	False	NA	-9	True	ATTAAA	-20	NA	84872228	84832197	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_84833480_84833751_84833911_84834812_84834976_84837330_84837523_84838102_84838244_84839590_84839693_84839846_84839925_84840006_84840130_84844670_84844823_84871809
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059975	chr15	+	189	1	Intergenic	novelGene_1901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCTAGGACAGCTACAAG	NA	False	NA	NA	False	NA	NA	NA	84903064	84903253	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_84903100_84903300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059983	chr15	+	2518	9	FSM	ENSMUSG00000022434.9	ENSMUST00000023069.9	2518	9	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_8	15.0742951742362	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGCTCAGTTTTTC	NA	False	NA	8	True	AATAAA	-15	NA	84921289	84947031	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_84921446_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84945732
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000059997	chr15	-	4070	25	FSM	ENSMUSG00000022432.8	ENSMUST00000023068.8	4047	25	-19	-4	-19	4	multi-exon	FALSE	canonical	3	89	junction_19	18.7071269098764	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACTCTGGTCTTGTCTTG	NA	False	NA	-2	True	TATAAA	-21	NA	85016184	84948885	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_84949307_84950419_84950531_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84970390_84973792_84973947_84975072_84975219_84976143_84976286_84980846_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84996887_84997074_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016029
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060008	chr15	-	166	1	Intergenic	novelGene_1902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAGAAAAAAAGAATGAGT	NA	False	NA	NA	False	NA	NA	NA	85088760	85088594	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_85088600_85088800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060016	chr15	+	2764	17	FSM	ENSMUSG00000006369.15	ENSMUST00000057410.14	3659	17	51	844	-5	-844	multi-exon	TRUE	canonical	3	136	junction_16	137.738202761616	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATTGCAATTTTGTTCA	NA	False	NA	58	True	NA	NA	NA	85090200	85169892	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_85090414_85106104_85106211_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85147459_85147603_85149450_85149583_85169240
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060030	chr15	+	192	1	Intergenic	novelGene_1903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGATGCCATCTGCCCGA	NA	False	NA	NA	False	NA	NA	NA	85096878	85097070	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_85096900_85097100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060036	chr15	+	2588	12	FSM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	-21	-630	-21	630	multi-exon	FALSE	canonical	3	1134	junction_3	91.244743989915	588	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGTAGAGGGCTTACC	NA	False	NA	20	True	AATAAA	-21	NA	85220424	85348043	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_85220782_85243654_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060048	chr15	-	180	1	Intergenic	novelGene_1904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAGTACCAATATAT	NA	False	NA	NA	False	NA	NA	NA	85257785	85257605	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_85257600_85257800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060054	chr15	-	968	5	FSM	ENSMUSG00000064284.13	ENSMUST00000071876.13	997	5	29	0	-8	0	multi-exon	FALSE	canonical	3	77	junction_4	106.509389257473	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGTTTGAGTCACTG	8115	False	NA	0	True	ATTAAA	-15	NA	85695868	85691172	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_85691740_85692456_85692569_85693412_85693526_85695102_85695250_85695839
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060062	chr15	+	211	1	Intergenic	novelGene_1905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGGTCAGAGGCAGGG	9355	False	NA	NA	False	NA	NA	NA	85733192	85733403	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_85733200_85733400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060077	chr15	+	2838	11	FSM	ENSMUSG00000022385.12	ENSMUST00000231074.2	2692	11	-146	0	55	0	multi-exon	FALSE	canonical	3	556	junction_6	54.9377829913076	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGACGTGTAGAGCTG	7192	False	NA	30	True	ATTAAA	-41	NA	85744000	85760774	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757840_85758078_85759175_85759420_85759736_85759953_85760349
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060086	chr15	+	170	1	Intergenic	novelGene_1906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGGTTCTAGTTATTTT	NA	False	NA	NA	False	NA	NA	NA	85771509	85771679	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_85771500_85771700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060096	chr15	+	4170	19	NIC	ENSMUSG00000035900.19	novel	4292	19	NA	NA	35	-5	combination_of_known_junctions	FALSE	canonical	3	47	junction_12	6.93265666213622	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGGAATCCTTTGTTC	NA	False	NA	NA	False	AATAAA	-21	NA	85942962	86021827	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_+_85943163_85975513_85975725_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86019081_86019151_86019550
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060101	chr15	-	245	1	Intergenic	novelGene_1907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCATGGTGTCTCTTCACA	NA	False	NA	NA	False	AAAACA	-30	NA	86078650	86078405	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_86078400_86078600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060110	chr15	-	180	1	Intergenic	novelGene_1908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGGCAGTGGTGGCACA	NA	False	NA	NA	False	NA	NA	NA	86080494	86080314	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_86080300_86080500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060121	chr15	-	614	1	Intergenic	novelGene_1909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGGTTCTGTAGAATAT	NA	False	NA	-1	True	NA	NA	NA	86098589	86097975	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_86098000_86098600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060123	chr15	+	3274	13	FSM	ENSMUSG00000051864.11	ENSMUST00000063414.9	3229	13	-41	-4	-41	4	multi-exon	FALSE	canonical	3	67	junction_12	8.71779788708135	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTTATTGCATTTATT	NA	False	NA	12	True	AATAAA	-21	NA	86098618	86382708	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_86098838_86118930_86118988_86119716_86120055_86123317_86123495_86176334_86176406_86183847_86183977_86185746_86185810_86195927_86196043_86235854_86235965_86250805_86250882_86275277_86275406_86333392_86333489_86381013
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060142	chr15	-	5053	14	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	230.695603639214	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTCCCGTGTTTGGC	NA	False	NA	-5	True	NA	NA	NA	88618427	88571236	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585474_88591236_88591498_88596818_88596968_88597057_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060144	chr15	-	4645	12	NIC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	224.227710409981	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTCCCGTGTTTGGC	NA	False	NA	-5	True	NA	NA	NA	88618427	88571236	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060148	chr15	-	2394	7	NNC	ENSMUSG00000022387.18	novel	3259	12	NA	NA	-408	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_6	229.394613905577	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTCCCGTGTTTGGC	NA	False	NA	-5	True	NA	NA	NA	88585475	88571236	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88585162
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060157	chr15	-	4836	13	NIC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	-77	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	187.247756254173	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTCCCGTGTTTGGC	NA	False	NA	-5	True	NA	NA	NA	88618513	88571236	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060200	chr15	+	193	1	Intergenic	novelGene_1910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAACCCTGCCTGGGAT	NA	False	NA	NA	False	NA	NA	NA	88611280	88611473	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_88611300_88611500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060221	chr15	-	227	1	Intergenic	novelGene_1911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATAACTGCTGAGCCGGG	NA	False	NA	NA	False	AAAAAG	-26	NA	88651067	88650840	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_88650800_88651100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060230	chr15	+	189	1	Intergenic	novelGene_1912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCACTTATAATAGGATAAT	NA	False	NA	NA	False	NA	NA	NA	88679918	88680107	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_88679900_88680100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060237	chr15	-	2104	10	FSM	ENSMUSG00000035845.18	ENSMUST00000162183.8	2130	10	25	1	-8	0	multi-exon	FALSE	canonical	0	0	junction_5	14.1691718917785	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTGTCTTGTTGTTGGT	9269	False	NA	-1	True	AATAAA	-16	NA	88703496	88689447	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_88690258_88690601_88690678_88690760_88690925_88695499_88695724_88696258_88696363_88698656_88698852_88699496_88699671_88700060_88700194_88700269_88700458_88703460
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060260	chr15	+	2427	6	FSM	ENSMUSG00000035828.12	ENSMUST00000042818.11	2427	6	0	0	0	0	multi-exon	TRUE	canonical	3	800	junction_3	47.4021096576935	284	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTCTGTTTATTGGACT	NA	False	NA	30	True	ATTAAA	-20	NA	88746388	88749929	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_88746956_88747040_88747151_88747243_88747295_88747381_88747752_88748518_88748696_88748777
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060269	chr15	-	191	1	Intergenic	novelGene_1913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAAGCTAGCTGACC	NA	False	NA	NA	False	NA	NA	NA	88756903	88756712	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_88756700_88756900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060273	chr15	+	2023	12	ISM	ENSMUSG00000015365.16	ENSMUST00000146993.8	4133	27	-1	49209	-1	10868	5prime_fragment	TRUE	canonical	3	47	junction_4	7.60382678775509	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTACTCGTAAGCCGTGT	2906	False	NA	NA	False	AAAAAG	-22	NA	88867110	88890142	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454_88889633_88889899
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060286	chr15	+	2389	9	FSM	ENSMUSG00000035757.18	ENSMUST00000082439.6	2383	9	-5	-1	-5	1	multi-exon	TRUE	canonical	3	22	junction_2	3.38193731461717	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGGTCACTGCCTTGGC	NA	False	NA	NA	False	AATAAA	-19	NA	88973281	88984544	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_88973869_88976906_88977111_88978339_88978527_88979801_88979933_88980741_88981023_88982834_88982980_88983465_88983652_88983789_88983947_88984033
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060305	chr15	-	6499	38	FSM	ENSMUSG00000036606.18	ENSMUST00000109331.9	6497	38	0	-2	0	2	multi-exon	FALSE	canonical	0	0	junction_37	73.775209877053	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGACTGGGTTTCTCCTTG	9143	False	NA	-3	True	AATACA	-21	NA	89064991	89039749	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060319	chr15	-	6412	37	NIC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	31	-4	intron_retention	FALSE	canonical	3	14	junction_36	72.4702312234496	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGGTTGACTGGGTTTC	9174	False	NA	-9	True	AATACA	-15	NA	89064960	89039755	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89064867
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060325	chr15	-	2003	20	FSM	ENSMUSG00000015377.11	ENSMUST00000078953.9	4585	20	-17	2599	0	0	multi-exon	FALSE	canonical	3	25	junction_9	20.4859251730037	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTCCCTGACTATTGG	NA	False	NA	1	True	AGTAAA	-19	NA	89080668	89069014	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071254_89071350_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060330	chr15	-	196	1	Intergenic	novelGene_1914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAGTAAACTAGCTGTC	NA	False	NA	NA	False	NA	NA	NA	89083163	89082967	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_89083000_89083200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060351	chr15	-	6184	41	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-5	3	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_37	81.2205908313895	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTACGCCTGCATCAGCAC	NA	False	NA	-12	True	TATAAA	-20	NA	89199479	89172482	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191802_89191889_89192049_89192224_89192363_89192687_89192774_89199264
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060352	chr15	-	6115	40	FSM	ENSMUSG00000036529.18	ENSMUST00000123791.8	6190	40	31	44	-9	3	multi-exon	FALSE	canonical	2	8	junction_12	87.3656082615084	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTACGCCTGCATCAGCAC	NA	False	NA	-12	True	TATAAA	-20	NA	89199483	89172482	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060367	chr15	+	1079	3	FSM	ENSMUSG00000054136.7	ENSMUST00000066991.7	1298	3	219	0	219	0	multi-exon	FALSE	canonical	3	63	junction_1	15	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGCCACTCTCTTGTG	NA	False	NA	NA	False	ATTAAA	-19	NA	89207141	89208934	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_89207337_89207479_89207604_89208174
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060374	chr15	-	2776	14	FSM	ENSMUSG00000022614.9	ENSMUST00000023283.6	2906	14	-5	135	-5	0	multi-exon	TRUE	canonical	0	0	junction_12	66.7675469479281	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTAGTGGTTTTTCCTT	NA	False	NA	-3	True	AATAAA	-21	NA	89239867	89235341	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766_89239021_89239558
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060403	chr15	+	3302	20	FSM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	-2	-1	-2	1	multi-exon	TRUE	canonical	1	369	junction_14	161.21684095061	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTTGATCCTCTGGCTG	NA	False	NA	7	True	AATAAA	-17	NA	89239936	89257030	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060406	chr15	+	1968	20	FSM	ENSMUSG00000008690.16	ENSMUST00000036987.12	3223	20	17	1238	0	25	multi-exon	FALSE	canonical	1	145	junction_1	244.22211859964	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGGACAGACTATTTAAATG	NA	False	NA	23	True	AATAAA	-23	NA	89239938	89255791	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_89240054_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060419	chr15	+	2052	20	FSM	ENSMUSG00000008690.16	ENSMUST00000088717.7	3302	20	12	1238	12	25	multi-exon	FALSE	canonical	1	166	junction_15	242.636453884124	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGGACAGACTATTTAAATG	NA	False	NA	23	True	AATAAA	-23	NA	89239950	89255791	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254803_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060454	chr15	+	204	1	Intergenic	novelGene_1915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTATACGAGACTGAAG	NA	False	NA	NA	False	NA	NA	NA	89300177	89300381	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_89300200_89300400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060465	chr15	-	2682	19	FSM	ENSMUSG00000078937.9	ENSMUST00000109313.9	2895	19	-3	216	-3	-216	multi-exon	FALSE	canonical	3	54	junction_15	11.4655953418569	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTTAGGTGCCTAT	5213	False	NA	NA	False	AATAAA	-22	NA	89310069	89300823	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_89301183_89301347_89301441_89302034_89302149_89302934_89303088_89303178_89303314_89303393_89303559_89304094_89304212_89304290_89304397_89304894_89305081_89305547_89305744_89306327_89306413_89306491_89306600_89307694_89307773_89307858_89307997_89308142_89308245_89308467_89308646_89308919_89309060_89309390_89309551_89310000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060475	chr15	-	1390	10	NIC	ENSMUSG00000022617.16	novel	1416	10	NA	NA	0	4	intron_retention	FALSE	canonical	3	62	junction_3	105.224627451097	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTAAGTGACATTCTGTT	1649	False	NA	NA	False	AATAAA	-34	NA	89313633	89310558	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_89310865_89311013_89311096_89311526_89311603_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89313031_89313251_89313361_89313579
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060500	chr15	+	184	1	FSM	ENSMUSG00000079242.3	ENSMUST00000168646.2	1280	1	903	193	903	-193	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGAAAGCCTAGGGAGTG	NA	False	NA	NA	False	NA	NA	NA	89314694	89314878	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_89314700_89314900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060510	chr15	+	3251	12	FSM	ENSMUSG00000022619.6	ENSMUST00000023291.6	5558	12	286	2021	286	-2021	multi-exon	FALSE	canonical	3	60	junction_1	12.5005784990103	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGCTGTTTTTAAGGTG	1544	False	NA	16	True	AATAAA	-16	NA	89338401	89346650	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_89338489_89339386_89339493_89340727_89341007_89341122_89341220_89341337_89342574_89342944_89343021_89343118_89343292_89343384_89343495_89344578_89344687_89344854_89344926_89345562_89345662_89345841
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060517	chr15	-	2713	8	ISM	ENSMUSG00000022620.15	ENSMUST00000165199.8	3492	9	1259	14	-53	-14	3prime_fragment	FALSE	canonical	3	62	junction_5	9.89743318610787	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTCTACAAAGTAATCTT	NA	False	NA	NA	False	NA	NA	NA	89360369	89356692	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr15_-_89357761_89357871_89357975_89358209_89358338_89358430_89358556_89358742_89358913_89358989_89359209_89359324_89359566_89359710
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060530	chr15	-	178	1	Intergenic	novelGene_1916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAAGCTGAGCGTGGT	4165	False	NA	NA	False	NA	NA	NA	89425728	89425550	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_89425600_89425700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060550	chr15	+	3779	1	ISM	ENSMUSG00000075470.3	ENSMUST00000100309.3	6644	3	5382	0	5344	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGAATATATTTTATTG	NA	False	NA	NA	False	AATAAA	-15	NA	90113895	90117674	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr15_+_90113900_90117700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060556	chr15	+	226	1	Intergenic	novelGene_1917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAAATCTAAATTGAA	NA	False	NA	NA	False	NA	NA	NA	90198813	90199039	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_90198800_90199000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060566	chr15	+	184	1	Intergenic	novelGene_1918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCAACCATTTGATTAAAG	NA	False	NA	NA	False	NA	NA	NA	90435778	90435962	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_90435800_90436000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060607	chr15	-	877	8	FSM	ENSMUSG00000022635.10	ENSMUST00000076070.9	877	8	0	0	0	0	multi-exon	FALSE	canonical	3	583	junction_1	44.8289265214016	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGGAATAGTGACTGGT	NA	False	NA	-7	True	AATAAA	-21	NA	93296215	93283986	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_93284168_93285457_93285534_93285627_93285741_93288931_93289040_93289334_93289447_93293467_93293497_93295050_93295137_93296043
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060621	chr15	+	3747	8	FSM	ENSMUSG00000036167.17	ENSMUST00000109256.11	1154	8	12	-2605	12	403	multi-exon	FALSE	canonical	3	108	junction_5	28.6199587843226	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGTCTCCTCTCGTTTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	93296242	93389794	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93353331_93353412_93357552_93357673_93362985_93363127_93386854
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060623	chr15	+	3627	7	NIC	ENSMUSG00000036167.17	novel	3351	9	NA	NA	12	403	combination_of_known_splicesites	FALSE	canonical	3	68	junction_5	39.6722685120083	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGTCTCCTCTCGTTTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	93296242	93389794	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93353331_93353412_93362985_93363127_93386854
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060666	chr15	-	2910	8	NIC	ENSMUSG00000022451.13	novel	3025	9	NA	NA	40	3	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	174.476242462043	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTATGTTGGCTTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	94487720	94475828	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94487632
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060672	chr15	+	2857	8	FSM	ENSMUSG00000063296.6	ENSMUST00000080141.6	2717	8	-136	-4	-118	4	multi-exon	FALSE	canonical	3	72	junction_7	14.5195153683108	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGATGTAGGTTTTGT	NA	False	NA	8	True	AATAAA	-21	NA	94526994	94993983	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_94527184_94535941_94536245_94612742_94612876_94777261_94777362_94829676_94829775_94909196_94909357_94972284_94972415_94992239
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060681	chr15	+	187	1	Intergenic	novelGene_1919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTAAACTGTTCTTGGA	NA	False	NA	NA	False	NA	NA	NA	95018019	95018206	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_95018000_95018200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060687	chr15	-	178	1	Intergenic	novelGene_1920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAAGAGAGGCT	NA	False	NA	NA	False	NA	NA	NA	95665305	95665127	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_95665100_95665300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060694	chr15	+	5652	20	FSM	ENSMUSG00000064210.8	ENSMUST00000071874.8	4927	20	-4	-721	-4	721	multi-exon	FALSE	canonical	3	69	junction_10	12.2043995518441	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGCCTAACGAGGTT	NA	False	NA	9	True	AATAAA	-18	NA	95688719	95873353	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_95688938_95762105_95762189_95792293_95792423_95810185_95810252_95811252_95811538_95811752_95811867_95813833_95813950_95818124_95818260_95825404_95825511_95829663_95829725_95839090_95839234_95841278_95841357_95846152_95846379_95847371_95847542_95847739_95847838_95853771_95853903_95859956_95860163_95863701_95863905_95865503_95865610_95870375
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060698	chr15	+	5715	21	FSM	ENSMUSG00000064210.8	ENSMUST00000227791.2	3149	21	-53	-2513	-4	721	multi-exon	FALSE	canonical	3	29	junction_1	22.898635330517	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGCCTAACGAGGTT	NA	False	NA	9	True	AATAAA	-18	NA	95688719	95873353	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_95688938_95728524_95728588_95762105_95762189_95792293_95792423_95810185_95810252_95811252_95811538_95811752_95811867_95813833_95813950_95818124_95818260_95825404_95825511_95829663_95829725_95839090_95839234_95841278_95841357_95846152_95846379_95847371_95847542_95847739_95847838_95853771_95853903_95859956_95860163_95863701_95863905_95865503_95865610_95870375
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060718	chr15	+	195	1	Intergenic	novelGene_1921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTTCTCTTAAAATGTT	NA	False	NA	NA	False	NA	NA	NA	96203673	96203868	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_96203700_96203900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060742	chr15	+	188	1	Intergenic	novelGene_1922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAACTGAAAAGAAAGGCT	9792	False	NA	NA	False	NA	NA	NA	96352364	96352552	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_96352400_96352600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060774	chr15	+	1092	1	Intergenic	novelGene_1923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAAAACTTTCCCTTCGA	NA	False	NA	NA	False	NA	NA	NA	96485102	96486194	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_96485100_96486200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060778	chr15	-	4699	16	FSM	ENSMUSG00000022462.8	ENSMUST00000023099.8	4660	16	-30	-9	-30	9	multi-exon	FALSE	canonical	3	252	junction_15	32.8196418153655	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTTTTTGTTTCCTTCTG	NA	False	NA	1	True	AATAAA	-25	NA	96597641	96585263	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96595802_96595919_96596062_96596145_96596495_96596699_96597288
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060788	chr15	-	4577	15	NIC	ENSMUSG00000022462.8	novel	4660	16	NA	NA	-27	6	combination_of_known_splicesites	FALSE	canonical	3	14	junction_12	84.1414018792418	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGATTTTTTGTTTCCTT	NA	False	NA	-2	True	AATAAA	-22	NA	96597638	96585266	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96596062_96596145_96596495_96596699_96597288
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060810	chr15	+	177	1	Intergenic	novelGene_1924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAACTAAGGTATTAAA	NA	False	NA	NA	False	NA	NA	NA	96681396	96681573	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_96681400_96681600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060813	chr15	-	3964	16	FSM	ENSMUSG00000022464.15	ENSMUST00000023101.10	3932	16	-20	-12	-20	9	multi-exon	FALSE	canonical	3	1416	junction_8	94.9644143877063	1478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTTCGTGAGTTATTT	NA	False	NA	0	True	AATAAA	-28	NA	96953857	96892691	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060823	chr15	-	4067	17	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	7	4	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	530.006688489636	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATCTTCTTTCGTGAGT	NA	False	NA	-5	True	AATAAA	-23	NA	96953830	96892696	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_-_96894973_96896323_96896422_96897369_96897515_96898211_96898347_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060847	chr15	+	247	1	Intergenic	novelGene_1925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	338	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATATACAGGGACAAAGGC	NA	False	NA	82	True	TATAAA	-1	NA	97024525	97024772	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_97024500_97024800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060858	chr15	-	202	1	Genic_Genomic	ENSMUSG00000116295.2	novel	NA	NA	NA	NA	10029	37	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAGAGAAAGTAGCCAAGG	879	False	NA	NA	False	NA	NA	NA	97055074	97054872	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr15_-_97054900_97055100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060870	chr15	-	1613	3	FSM	ENSMUSG00000116295.2	ENSMUST00000231024.2	655	3	-17	-941	-17	941	multi-exon	FALSE	canonical	3	219	junction_1	244.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCACTGTTGCTTGCTTGCT	NA	False	NA	-5	True	NA	NA	NA	97065142	97057872	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_97059277_97064383_97064508_97065057
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060891	chr15	+	179	1	Intergenic	novelGene_1926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGCATCGGGTCATAACC	8693	False	NA	NA	False	NA	NA	NA	97256112	97256291	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_97256100_97256300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060899	chr15	+	2262	2	NNC	ENSMUSG00000044250.9	novel	2185	6	NA	NA	15476	13	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTCTGCCTGTTGTGTG	NA	False	NA	27	True	AATAAA	-28	NA	97274573	97283574	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_+_97275170_97281908
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060902	chr15	+	2252	2	NNC	ENSMUSG00000044250.9	novel	1790	2	NA	NA	15477	1	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTCCAAAAGTGGTTCT	NA	False	NA	15	True	AATAAA	-16	NA	97274574	97283562	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_+_97275170_97281905
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060918	chr15	+	207	1	Intergenic	novelGene_1927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATAGTGATATTCTATG	NA	False	NA	NA	False	AAGAAA	-2	NA	97301289	97301496	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_97301300_97301500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060923	chr15	+	166	1	Intergenic	novelGene_1928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGAGAAGGGGACTAA	7271	False	NA	NA	False	NA	NA	NA	97368546	97368712	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_97368500_97368700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060934	chr15	-	2266	17	FSM	ENSMUSG00000022466.7	ENSMUST00000023104.7	2271	17	5	0	5	0	multi-exon	FALSE	canonical	3	236	junction_16	35.978292066189	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGGTCGATATTTCATTT	NA	False	NA	-3	True	AATAAA	-25	NA	97603701	97572977	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_97573261_97576266_97576368_97576950_97577049_97578215_97578403_97579499_97579721_97581707_97581807_97581913_97581985_97584322_97584445_97585991_97586120_97589062_97589192_97591094_97591166_97591984_97592107_97594378_97594507_97596796_97596920_97598948_97599093_97601082_97601251_97603630
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060938	chr15	+	2542	3	FSM	ENSMUSG00000081534.4	ENSMUST00000117892.2	2536	3	-6	0	-6	0	multi-exon	TRUE	canonical	3	145	junction_2	1	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTTTTTTTTTCACT	NA	False	NA	17	True	AATAAA	-18	NA	97682229	97690573	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_97682498_97687783_97687952_97688467
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000060955	chr15	+	1451	8	FSM	ENSMUSG00000052369.9	ENSMUST00000229428.2	1455	8	8	-4	-2	3	multi-exon	FALSE	canonical	3	86	junction_1	28.3318527024094	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTCTCTGACTGCCTG	7688	False	NA	14	True	AATAAA	-20	NA	97862117	97868159	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_97862217_97862720_97862912_97864127_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061002	chr15	+	2800	23	FSM	ENSMUSG00000033065.15	ENSMUST00000051226.8	2879	23	85	-6	85	0	multi-exon	FALSE	canonical	0	0	junction_1	24.5577830991277	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGCGCTCTTGTTATT	1681	False	NA	7	True	AATAAA	-19	NA	98006431	98030328	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_98006493_98010034_98010128_98016062_98016137_98017273_98017352_98018671_98018862_98019077_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061015	chr15	-	2177	4	FSM	ENSMUSG00000048175.14	ENSMUST00000123626.8	1100	4	0	-1077	0	0	multi-exon	FALSE	canonical	3	84	junction_3	16.7531091641721	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCACTTCCAGTTTCT	NA	False	NA	0	True	AATAAA	-21	NA	98043587	98032517	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_98034320_98039164_98039270_98040531_98040696_98043481
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061017	chr15	-	2173	4	FSM	ENSMUSG00000048175.14	ENSMUST00000059112.12	1049	4	-47	-1077	0	0	multi-exon	FALSE	canonical	3	32	junction_3	39.6848697728604	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCACTTCCAGTTTCT	NA	False	NA	0	True	AATAAA	-21	NA	98043587	98032517	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_98034320_98039164_98039270_98040531_98040692_98043481
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061041	chr15	-	2361	10	FSM	ENSMUSG00000022992.18	ENSMUST00000116400.4	2324	10	-33	-4	-13	4	multi-exon	FALSE	canonical	1	217	junction_2	304.537941847467	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGATCGATTGTGTTCTC	NA	False	NA	-5	True	ATTAAA	-30	NA	98432158	98416684	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061098	chr15	-	187	1	Antisense	novelGene_ENSMUSG00000091050.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCCTTTACCCCCCCCCC	NA	False	NA	NA	False	NA	NA	NA	98466418	98466231	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr15_-_98466200_98466400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061108	chr15	-	3205	17	FSM	ENSMUSG00000003360.16	ENSMUST00000003450.15	3187	17	-15	-3	-10	3	multi-exon	FALSE	canonical	3	15	junction_5	5.44252641243017	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCCCCGAGCTCCATT	6984	False	NA	-11	True	AATAAA	-18	NA	98560785	98543011	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_98543899_98544224_98544400_98545043_98545153_98545354_98545507_98546367_98546611_98547595_98547774_98548024_98548171_98548473_98548700_98548793_98548938_98549124_98549238_98549345_98549480_98549798_98549938_98550353_98550420_98550768_98550863_98554482_98554594_98556110_98556317_98560703
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061119	chr15	+	178	1	Intergenic	novelGene_1929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTTAAAGAGTAAA	NA	False	NA	NA	False	NA	NA	NA	98563165	98563343	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_98563200_98563300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061134	chr15	-	182	1	Intergenic	novelGene_1930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAATCCAATTTTA	8151	False	NA	NA	False	NA	NA	NA	98596519	98596337	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_98596300_98596500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061141	chr15	+	156	1	Intergenic	novelGene_1931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAGGAGCTGAAAA	NA	False	NA	NA	False	NA	NA	NA	98604828	98604984	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_98604800_98605000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061148	chr15	+	185	1	Intergenic	novelGene_1932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGATCCTTTAACTATAA	NA	False	NA	NA	False	NA	NA	NA	98611340	98611525	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_98611300_98611500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061156	chr15	-	722	6	FSM	ENSMUSG00000003355.8	ENSMUST00000003445.8	734	6	16	-4	16	0	multi-exon	FALSE	canonical	3	632	junction_4	33.5177564881661	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTATTTTTCACTCGGT	NA	False	NA	NA	False	AATAAA	-19	NA	98626063	98622246	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_98622484_98624364_98624436_98624780_98624815_98625091_98625180_98625563_98625630_98625837
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061168	chr15	+	200	1	Antisense	novelGene_ENSMUSG00000003355.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAAGACTTTGCTTGGTC	NA	False	NA	NA	False	NA	NA	NA	98623785	98623985	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr15_+_98623800_98624000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061189	chr15	-	188	1	Intergenic	novelGene_1933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCCTGGGCTGGTGAG	NA	False	NA	NA	False	NA	NA	NA	98682011	98681823	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_98681800_98682000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061194	chr15	-	1641	12	FSM	ENSMUSG00000067713.8	ENSMUST00000168846.3	1652	12	11	0	11	0	multi-exon	FALSE	canonical	3	244	junction_11	39.9075377622816	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTTGATTTCTGC	9360	False	NA	-4	True	ATTAAA	-22	NA	98729391	98710677	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98729310
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061196	chr15	-	2042	12	NIC	ENSMUSG00000067713.8	novel	1652	12	NA	NA	86	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_11	100.554249163292	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTTGATTTCTGC	9502	False	NA	-4	True	ATTAAA	-22	NA	98729249	98710677	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98728767
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061209	chr15	-	204	1	Intergenic	novelGene_1934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGCACTTGGGAGAGGC	NA	False	NA	NA	False	NA	NA	NA	98715412	98715208	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_98715200_98715400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061214	chr15	-	4317	15	NNC	ENSMUSG00000048154.18	novel	19823	55	NA	NA	-1	-4815	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	49.0857226010304	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTGTGTCAACAGCAAGG	9470	False	NA	NA	False	NA	NA	NA	98769086	98757409	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_-_98757496_98758514_98758626_98758928_98759046_98759482_98760565_98760656_98762091_98762226_98762373_98762529_98762688_98762814_98762930_98763008_98763175_98763381_98763545_98763669_98763780_98763876_98764101_98764256_98764384_98764552_98764639_98768894
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061215	chr15	-	4314	15	ISM	ENSMUSG00000048154.18	ENSMUST00000023741.16	19823	55	-1	27857	-1	-4815	5prime_fragment	FALSE	canonical	3	59	junction_2	43.8559795099313	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTGTGTCAACAGCAAGG	9470	False	NA	NA	False	NA	NA	NA	98769086	98757409	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr15_-_98757496_98758514_98758626_98758931_98759046_98759482_98760565_98760656_98762091_98762226_98762373_98762529_98762688_98762814_98762930_98763008_98763175_98763381_98763545_98763669_98763780_98763876_98764101_98764256_98764384_98764552_98764639_98768894
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061242	chr15	+	220	1	Intergenic	novelGene_1935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTCTTCTTTTAAGTG	NA	False	NA	NA	False	NA	NA	NA	98785844	98786064	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_98785800_98786100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061266	chr15	-	1138	1	NIC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	1875	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCTGGATACTTTG	2033	False	NA	NA	False	AGTAAA	-17	NA	98830444	98829306	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_98829300_98830400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061282	chr15	-	1654	4	FSM	ENSMUSG00000072235.7	ENSMUST00000097014.7	1803	4	152	-3	152	3	multi-exon	FALSE	canonical	3	1268	junction_3	1593.04014038846	408	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTGTTCTATATTTGA	NA	False	NA	-1	True	AATAAA	-22	NA	98851432	98847714	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_98848896_98849068_98849218_98849349_98849573_98851331
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061290	chr15	+	210	1	Intergenic	novelGene_1936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	380	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGATCTGCCCTGGCCT	NA	False	NA	NA	False	NA	NA	NA	98901267	98901477	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_98901300_98901500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061301	chr15	+	193	1	Intergenic	novelGene_1937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGCTGAGGCAGGAGAAT	NA	False	NA	NA	False	NA	NA	NA	98905851	98906044	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_98905900_98906000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061322	chr15	+	184	1	Intergenic	novelGene_1938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATAAAACCAAGCTGAC	NA	False	NA	NA	False	NA	NA	NA	98971730	98971914	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_98971700_98971900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061336	chr15	+	2254	14	FSM	ENSMUSG00000032783.10	ENSMUST00000039665.8	2255	14	7	-6	-2	0	multi-exon	FALSE	canonical	3	68	junction_1	8.88852727732572	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCAGCCAGTGCTGTTG	NA	False	NA	14	True	AATAAA	-23	NA	98972865	98981290	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_98972974_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980587_98980789_98980984_98981108
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061342	chr15	-	133	1	Intergenic	novelGene_1939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATAATGTTGGGCT	2500	False	NA	NA	False	NA	NA	NA	98990107	98989974	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_98990000_98990100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061350	chr15	+	3130	13	FSM	ENSMUSG00000051934.6	ENSMUST00000063517.6	3096	13	-27	-7	-27	7	multi-exon	FALSE	canonical	3	296	junction_2	25.9147909289056	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCCGTCTCTCTAGGCCTC	NA	False	NA	25	True	AATAAA	-30	NA	99024409	99111103	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_99024769_99047514_99047812_99064960_99065041_99071282_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061359	chr15	+	2808	12	NIC	ENSMUSG00000051934.6	novel	3096	13	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	100.076582246046	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTAGCGCCGTCTCTCT	NA	False	NA	18	True	AATAAA	-23	NA	99024427	99111096	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_+_99024769_99064960_99065041_99071282_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061368	chr15	-	1918	15	FSM	ENSMUSG00000037570.17	ENSMUST00000041190.17	1916	15	-2	0	-2	0	multi-exon	FALSE	canonical	3	647	junction_2	85.1129201923742	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTTTTATTTTTTTTTA	NA	False	NA	1	True	AATAAA	-21	NA	99149844	99140697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99148343_99148464_99149742
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061372	chr15	-	1798	14	FSM	ENSMUSG00000037570.17	ENSMUST00000163506.3	1771	14	-18	-9	-2	0	multi-exon	FALSE	canonical	3	113	junction_13	210.299476515005	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTTTTATTTTTTTTTA	NA	False	NA	1	True	AATAAA	-21	NA	99149844	99140697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99149742
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061401	chr15	+	236	1	Intergenic	novelGene_1940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTTACCATGTGCATGC	NA	False	NA	NA	False	NA	NA	NA	99181213	99181449	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_99181200_99181400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061412	chr15	+	3335	26	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-10	0	combination_of_known_junctions	TRUE	canonical	3	102	junction_21	28.1893596947501	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTCCTCTTCATGT	NA	False	NA	44	True	TTTAAA	-25	NA	99192957	99214899	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061442	chr15	+	190	1	Intergenic	novelGene_1941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGGGGAGAGAGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	99248473	99248663	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_99248500_99248700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061451	chr15	-	179	1	Intergenic	novelGene_1942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTATTTTTTATCTTTTA	2893	False	NA	0	True	NA	NA	NA	99284306	99284127	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_99284100_99284300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061463	chr15	+	2356	10	FSM	ENSMUSG00000023010.16	ENSMUST00000023749.15	2452	10	96	0	-8	0	multi-exon	FALSE	canonical	3	1506	junction_9	135.383406171756	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGTCTCAGTGTTAAAT	NA	False	NA	15	True	AATAAA	-20	NA	99290858	99307930	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_99290922_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061475	chr15	+	2563	11	FSM	ENSMUSG00000023010.16	ENSMUST00000161250.8	1148	11	0	-1415	0	0	multi-exon	FALSE	canonical	3	52	junction_1	709.276455269735	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGTCTCAGTGTTAAAT	NA	False	NA	15	True	AATAAA	-20	NA	99290866	99307930	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_99290922_99297537_99297753_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061479	chr15	+	2382	11	FSM	ENSMUSG00000023010.16	ENSMUST00000160635.8	871	11	1	-1512	1	-1	multi-exon	FALSE	canonical	3	18	junction_1	734.518481727996	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTGTCTCAGTGTTAAA	NA	False	NA	14	True	AATAAA	-19	NA	99290867	99307929	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_99290922_99291575_99291612_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061485	chr15	+	2442	10	FSM	ENSMUSG00000023010.16	ENSMUST00000159209.8	944	10	15	-1513	15	-1	multi-exon	FALSE	canonical	3	114	junction_1	555.512064964378	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTGTCTCAGTGTTAAA	NA	False	NA	14	True	AATAAA	-19	NA	99291114	99307929	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_99291265_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061496	chr15	+	1576	1	NIC	ENSMUSG00000023010.16	novel	2452	10	NA	NA	1206	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTGTCTCAGTGTTAAA	NA	False	NA	14	True	AATAAA	-19	NA	99306353	99307929	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_+_99306400_99307900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061498	chr15	+	184	1	Intergenic	novelGene_1943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGTCCCCTTCCCTAA	NA	False	NA	NA	False	NA	NA	NA	99317899	99318083	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_99317900_99318100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061506	chr15	-	4835	13	FSM	ENSMUSG00000023009.15	ENSMUST00000023747.14	4853	13	19	-1	-17	1	multi-exon	TRUE	canonical	3	12	junction_6	8.3877390676312	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGTGTGGCAGCCCCCC	NA	False	NA	0	True	AATAAA	-26	NA	99355610	99319914	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_99320790_99321016_99321160_99321246_99321556_99321833_99321916_99321998_99322159_99323433_99326049_99327234_99327349_99330585_99330706_99331325_99331365_99331450_99331520_99331920_99332071_99333907_99333969_99355512
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061518	chr15	-	1262	2	FSM	ENSMUSG00000037525.6	ENSMUST00000040313.6	1276	2	14	0	-8	0	multi-exon	FALSE	canonical	3	84	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTGTCGTTTCTTTGCT	NA	False	NA	0	True	ATTAAA	-19	NA	99372597	99367959	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_99368961_99372336
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061530	chr15	-	2908	17	NIC	ENSMUSG00000023015.15	novel	3052	18	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_16	157.969921484281	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTTGGTTTTCTTGTC	NA	False	NA	0	True	AATAAA	-20	NA	99549515	99518376	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540849_99549387
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061532	chr15	-	3052	18	FSM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_16	174.822975218819	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTTGGTTTTCTTGTC	NA	False	NA	0	True	AATAAA	-20	NA	99549524	99518376	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99541273_99541405_99549387
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061539	chr15	-	2932	17	FSM	ENSMUSG00000023015.15	ENSMUST00000023756.12	2933	17	2	-1	2	0	multi-exon	FALSE	canonical	3	453	junction_16	66.1194172974173	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTTGGTTTTCTTGTC	NA	False	NA	0	True	AATAAA	-20	NA	99549535	99518376	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99549387
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061564	chr15	+	178	1	Intergenic	novelGene_1944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAGACAATCCACATTC	NA	False	NA	NA	False	NA	NA	NA	99557217	99557395	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_99557200_99557400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061571	chr15	+	229	1	Intergenic	novelGene_1945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACCCAACTCCCCGAATT	NA	False	NA	NA	False	NA	NA	NA	99566057	99566286	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_99566100_99566300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061580	chr15	+	3327	13	FSM	ENSMUSG00000023018.6	ENSMUST00000023759.6	3307	13	-18	-2	-18	2	multi-exon	FALSE	canonical	3	247	junction_12	25.0281785638153	243	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGCTGTCTGGAGGGGT	7523	False	NA	28	True	AATAAA	-19	NA	99599991	99611874	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_99600380_99600986_99601175_99601471_99601515_99601618_99601742_99602211_99602335_99603507_99603625_99605191_99605294_99605520_99605683_99605765_99605864_99607161_99607298_99608973_99609097_99610039_99610142_99610252
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061617	chr15	-	4258	11	FSM	ENSMUSG00000023022.15	ENSMUST00000073691.5	4243	11	-13	-2	-13	2	multi-exon	FALSE	canonical	3	692	junction_4	128.449367456597	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGTCCACACTGCTCT	7225	False	NA	-1	True	AATAAA	-17	NA	99773350	99676348	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741705_99773213
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061627	chr15	-	4207	11	NIC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	155	junction_10	232.114109868401	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTGTCCACACTGCT	8024	False	NA	-3	True	AATAAA	-15	NA	99772551	99676350	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741705_99772463
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061628	chr15	-	4189	11	NNC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_10	266.84948941304	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTGTCCACACTGCT	7285	False	NA	-3	True	AATAAA	-15	NA	99773290	99676350	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741698_99773213
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061645	chr15	+	200	1	Intergenic	novelGene_1946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAAGACAGATCCTATAAG	NA	False	NA	NA	False	NA	NA	NA	99770077	99770277	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_99770100_99770300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061655	chr15	+	201	1	Intergenic	novelGene_1947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTGTATTATGTTTCAT	NA	False	NA	NA	False	NA	NA	NA	99804606	99804807	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_99804600_99804800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061680	chr15	+	205	1	Intergenic	novelGene_1948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGGAAATTAATTCCTT	223	False	NA	NA	False	NA	NA	NA	99875815	99876020	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_99875800_99876000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061693	chr15	+	259	1	Intergenic	novelGene_1949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGTAGAGGCAGGCAGA	NA	False	NA	NA	False	TTTAAA	-43	NA	99942212	99942471	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_99942200_99942500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061700	chr15	+	187	1	Intergenic	novelGene_1950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAATGCAGATCTATAAA	NA	False	NA	NA	False	NA	NA	NA	99947969	99948156	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_99948000_99948200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061710	chr15	+	188	1	Intergenic	novelGene_1951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATCCACCTGCCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	99952424	99952612	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_99952400_99952600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061715	chr15	-	183	1	Intergenic	novelGene_1952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGGGAAACTTC	NA	False	NA	NA	False	NA	NA	NA	99977691	99977508	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_99977500_99977700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061725	chr15	+	184	1	Intergenic	novelGene_1953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAAAGCCGGGCGTGGTG	1664	False	NA	NA	False	NA	NA	NA	100085893	100086077	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_100085900_100086100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061728	chr15	+	180	1	Intergenic	novelGene_1954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAACACCAAAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	100094446	100094626	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_100094400_100094600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061731	chr15	+	218	1	Intergenic	novelGene_1955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGTTACTCTCAGAGGG	NA	False	NA	NA	False	NA	NA	NA	100098547	100098765	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_100098500_100098800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061746	chr15	+	2344	7	FSM	ENSMUSG00000023027.14	ENSMUST00000023769.11	2365	7	25	-4	25	4	multi-exon	FALSE	canonical	3	255	junction_1	32.1334024895521	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTCGGAATGCAAAACAT	NA	False	NA	17	True	ATTAAA	-20	NA	100125724	100159129	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061758	chr15	+	231	1	Intergenic	novelGene_1956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTGCTTGGCCCCTCTG	NA	False	NA	NA	False	NA	NA	NA	100193046	100193277	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_100193000_100193300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061759	chr15	+	1902	2	FSM	ENSMUSG00000054619.8	ENSMUST00000067752.5	1946	2	40	4	12	-4	multi-exon	FALSE	canonical	3	19	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCTTGGCTGCATTTG	578	False	NA	8	True	AATAAA	-43	NA	100202681	100212232	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_100203226_100210874
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061772	chr15	+	95	1	Intergenic	novelGene_1957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTGAGTGGAGAAGATG	8025	False	NA	NA	False	NA	NA	NA	100225224	100225319	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_100225200_100225300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061777	chr15	-	2870	18	NNC	ENSMUSG00000023030.17	novel	3025	17	NA	NA	-23	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	53.8380244062904	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTAGGGGTGCGA	NA	False	NA	NA	False	AATAAA	-22	NA	100320906	100285778	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_-_100286319_100286443_100287043_100293150_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061812	chr15	-	4151	5	FSM	ENSMUSG00000044636.7	ENSMUST00000061457.7	4375	5	224	0	224	0	multi-exon	FALSE	canonical	3	12	junction_4	9.28372231381357	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTGGGTTCTTTATCTT	NA	False	NA	2	True	ATTAAA	-17	NA	100393145	100377450	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_100380582_100382330_100382628_100385825_100386086_100387315_100387548_100392914
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061822	chr15	-	3245	16	FSM	ENSMUSG00000009733.10	ENSMUST00000229696.2	3302	16	8	49	8	0	multi-exon	TRUE	canonical	3	68	junction_1	18.9415475139235	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGGTTCTTGTTGCTG	NA	False	NA	1	True	AATAAA	-22	NA	100449881	100400676	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_100402325_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449790
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061831	chr15	-	3209	16	NNC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	27.8291613639761	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTTTGGTTCTTGTTGC	NA	False	NA	-1	True	AATAAA	-20	NA	100449850	100400678	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_-_100402322_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449790
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061835	chr15	+	178	1	Intergenic	novelGene_1958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATAAGGGTTGTA	3577	False	NA	NA	False	NA	NA	NA	100464779	100464957	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_100464800_100465000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061838	chr15	-	3696	2	FSM	ENSMUSG00000009739.18	ENSMUST00000177335.2	3654	2	-39	-3	-39	0	multi-exon	FALSE	canonical	3	66	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTGCCTATTTTGTTG	8467	False	NA	0	True	AATAAA	-21	NA	100478151	100473198	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_100476500_100477756
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061849	chr15	+	1928	4	FSM	ENSMUSG00000000346.10	ENSMUST00000000356.10	2135	4	207	0	207	0	multi-exon	FALSE	canonical	0	0	junction_1	569.007518013212	481	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCAGCATTCTTTACTTAG	NA	False	NA	18	True	AATAAA	-25	NA	100513436	100518642	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_100513606_100514793_100514913_100515805_100516052_100517248
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061858	chr15	-	1367	4	FSM	ENSMUSG00000053559.14	ENSMUST00000172334.9	920	4	-337	-110	-337	0	multi-exon	FALSE	canonical	3	417	junction_3	158.779371736032	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTTGTTCTGCTTAA	NA	False	NA	16	True	ATTAAA	-37	NA	100535158	100519219	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_100519908_100520509_100520591_100534067_100534137_100534629
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061859	chr15	-	1050	4	FSM	ENSMUSG00000053559.14	ENSMUST00000066068.7	1135	4	85	0	-79	0	multi-exon	FALSE	canonical	3	310	junction_3	209.183067086119	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTTGTTCTGCTTAA	NA	False	NA	16	True	ATTAAA	-37	NA	100534651	100519219	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_100519908_100520509_100520591_100534067_100534137_100534439
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061895	chr15	-	3849	12	FSM	ENSMUSG00000037280.13	ENSMUST00000161514.2	2746	12	-49	-1054	-49	3	multi-exon	FALSE	canonical	3	77	junction_7	8.71021059418435	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGGATTTGAGTTCCT	1625	False	NA	-4	True	AATAAA	-22	NA	100618407	100589690	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_100591348_100592450_100592604_100594427_100594530_100594999_100595132_100595658_100595860_100596997_100597116_100601228_100601464_100601991_100602142_100611976_100612150_100613808_100614396_100617895_100618117_100618287
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061913	chr15	-	195	1	Intergenic	novelGene_1959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGAGAGCCCCCAGTGC	NA	False	NA	NA	False	NA	NA	NA	100861963	100861768	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_100861800_100862000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061923	chr15	+	2040	8	FSM	ENSMUSG00000000531.6	ENSMUST00000000543.6	2033	8	-7	0	-7	0	multi-exon	FALSE	canonical	3	148	junction_1	31.968096341094	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCAGTGTGGTAACT	6234	False	NA	12	True	TATAAA	-21	NA	101122061	101130637	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_101122426_101124794_101124845_101126712_101126768_101126871_101126975_101128414_101128509_101128605_101128673_101128865_101128933_101129397
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061941	chr15	+	2638	8	FSM	ENSMUSG00000023034.8	ENSMUST00000228985.2	2553	8	-85	0	-85	0	multi-exon	FALSE	canonical	3	104	junction_1	37.8897433754997	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTCTTTTTTTCTGTTT	432	False	NA	19	True	AATAAA	-21	NA	101152064	101172676	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_101152233_101156188_101156308_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061962	chr15	+	1261	3	FSM	ENSMUSG00000037204.8	ENSMUST00000048393.8	1270	3	9	0	9	0	multi-exon	FALSE	canonical	3	465	junction_2	16.5	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCTTGGCCTGTGTCCT	8039	False	NA	31	True	AATAAA	-23	NA	101182161	101188826	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_101182427_101184813_101185132_101188148
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061980	chr15	-	1804	9	FSM	ENSMUSG00000049382.11	ENSMUST00000023952.10	1958	9	146	8	146	-8	multi-exon	FALSE	canonical	3	49	junction_8	4.93552175559991	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGCTATGTATGCATTC	6038	False	NA	-2	True	AATAAA	-24	NA	101912771	101905140	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_101905569_101906094_101906154_101906287_101906509_101906825_101906952_101907208_101907374_101907865_101907962_101909014_101909076_101909851_101910061_101912332
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000061995	chr15	+	3892	15	FSM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	-31	-7	-31	7	multi-exon	FALSE	canonical	3	620	junction_1	87.2144027143242	316	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCAGTTTATCGCTCTT	NA	False	NA	56	True	AATAAA	-26	NA	101982176	102005615	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062006	chr15	-	179	2	Antisense	novelGene_ENSMUSG00000058655.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGCCACACATTGATT	NA	False	NA	NA	False	NA	NA	NA	101987391	101985570	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr15_-_101985731_101987372
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062022	chr15	-	2447	11	FSM	ENSMUSG00000036966.16	ENSMUST00000154032.2	2456	11	11	-2	11	2	multi-exon	FALSE	canonical	3	150	junction_5	18.3913022921162	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGGAAGGGGAATCCTTCC	NA	False	NA	-3	True	AATAAA	-28	NA	102044658	102024960	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_102026149_102026475_102026649_102026726_102026847_102027362_102027421_102027702_102027853_102036973_102037160_102038712_102038849_102039100_102039226_102040302_102040379_102041850_102041998_102044570
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062032	chr15	-	2615	18	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	23	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	39.6618928436936	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGTATGTTTTAAAGCT	6655	False	NA	NA	False	AATAAA	-19	NA	102112305	102085431	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102110878_102111010_102111571_102111696_102112130
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062083	chr15	-	2648	15	FSM	ENSMUSG00000001281.11	ENSMUST00000001327.11	2683	15	36	-1	0	1	multi-exon	FALSE	canonical	3	29	junction_13	6.6719791758105	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCCTCTACTTTACTT	NA	False	NA	0	True	AATAAA	-15	NA	102140343	102124428	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_102124703_102124906_102125068_102125326_102125533_102125681_102125902_102126208_102126433_102126931_102127126_102127608_102127756_102130523_102130614_102130776_102130873_102131075_102131235_102131765_102132008_102132736_102132908_102132992_102133195_102135832_102136037_102140285
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062097	chr15	-	2725	8	FSM	ENSMUSG00000001288.16	ENSMUST00000063339.14	2718	8	-5	-2	-5	0	multi-exon	FALSE	canonical	3	57	junction_4	9.19183310979738	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGGTGTGGATCCCTCTA	NA	False	NA	0	True	AATAAA	-16	NA	102154940	102143372	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_102144659_102147239_102147399_102147824_102148030_102148292_102148470_102148562_102148724_102149492_102149635_102150270_102150420_102154494
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062115	chr15	+	6661	31	FSM	ENSMUSG00000058290.5	ENSMUST00000064924.6	6658	31	-3	0	-3	0	multi-exon	TRUE	canonical	3	138	junction_1	58.1614706370692	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	356	False	NA	17	True	AATAAA	-17	NA	102204697	102232792	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_102204851_102205194_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062124	chr15	+	6701	31	FSM	ENSMUSG00000058290.5	ENSMUST00000229050.2	6635	31	-21	-45	11	0	multi-exon	FALSE	canonical	3	92	junction_1	63.2712063703195	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	370	False	NA	17	True	AATAAA	-17	NA	102204711	102232792	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_102204851_102205140_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062138	chr15	+	6654	31	NIC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	69.6461213724226	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	392	False	NA	17	True	AATAAA	-17	NA	102204733	102232792	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_+_102204851_102205165_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062145	chr15	+	196	1	Genic_Genomic	ENSMUSG00000058290.5	novel	NA	NA	NA	NA	-115	2114	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCAGGATGTGCTGGGTG	2714	False	NA	NA	False	NA	NA	NA	102227429	102227625	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr15_+_102227400_102227600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062149	chr15	+	232	1	Intergenic	novelGene_1960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCTGGGAAGCACACAGA	8625	False	NA	NA	False	NA	NA	NA	102233340	102233572	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_102233300_102233600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062156	chr15	+	651	6	FSM	ENSMUSG00000001289.13	ENSMUST00000166658.8	1062	6	28	383	-4	4	multi-exon	FALSE	canonical	3	835	junction_1	29.5932424718887	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTGGTCTATTCTTGCA	362	False	NA	30	True	AATAAA	-18	NA	102234578	102239925	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_102234696_102234867_102234971_102235252_102235285_102236956_102237032_102237146_102237253_102239707
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062164	chr15	+	111	1	ISM	ENSMUSG00000001289.13	ENSMUST00000166658.8	1062	6	5264	383	4970	4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTGGTCTATTCTTGCA	5598	False	NA	30	True	AATAAA	-18	NA	102239814	102239925	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr15_+_102239800_102239900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062167	chr15	+	1197	7	FSM	ENSMUSG00000001285.13	ENSMUST00000113682.9	1480	7	-1	284	-1	4	multi-exon	FALSE	canonical	3	485	junction_2	12.1620995994387	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTCCCTGATCCACCAA	5926	False	NA	20	True	AATAAA	-21	NA	102240142	102246290	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_102240389_102240524_102240638_102242636_102242797_102245266_102245420_102245535_102245659_102245763_102245946_102246070
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062176	chr15	-	206	1	Intergenic	novelGene_1961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTCTGGTTTTTGAGT	8911	False	NA	NA	False	NA	NA	NA	102243709	102243503	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_102243500_102243700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062183	chr15	-	1818	16	FSM	ENSMUSG00000036678.9	ENSMUST00000041208.9	1811	16	-7	0	5	0	multi-exon	FALSE	canonical	3	447	junction_7	35.3844912669692	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGATGTAACTCCGAGTG	NA	False	NA	-5	True	AATAAA	-25	NA	102259201	102246686	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470_102255527_102258387_102258516_102258930
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062188	chr15	+	174	1	Intergenic	novelGene_1962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAGATATCAGTA	NA	False	NA	NA	False	NA	NA	NA	102257081	102257255	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_102257100_102257300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062200	chr15	+	213	1	Intergenic	novelGene_1963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGAGACTGTCCCCAGGT	3406	False	NA	NA	False	NA	NA	NA	102299826	102300039	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_102299800_102300000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062208	chr15	+	7875	6	FSM	ENSMUSG00000001280.14	ENSMUST00000001326.7	7754	6	-134	13	-87	-13	multi-exon	FALSE	canonical	3	93	junction_1	20.1295802241378	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTGGTGTATTGAGAG	NA	False	NA	17	True	AATAAA	-4	NA	102314680	102344826	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_102314858_102316206_102316368_102316650_102318155_102334065_102334232_102338391_102338592_102339159
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062217	chr15	-	177	1	Intergenic	novelGene_1964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAATAAAAGCAGCTGGG	NA	False	NA	NA	False	NA	NA	NA	102325219	102325042	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_102325000_102325200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062232	chr15	+	1184	5	FSM	ENSMUSG00000023048.14	ENSMUST00000023810.12	1224	5	34	6	7	-6	multi-exon	FALSE	canonical	3	129	junction_1	259.364969685576	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGACTGGGCTAGTTTTG	2412	False	NA	34	True	AATAAA	-37	NA	102367643	102371235	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_102367691_102367898_102368017_102368542_102368582_102368804_102369155_102370605
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062237	chr15	+	1062	4	FSM	ENSMUSG00000023048.14	ENSMUST00000164957.8	1055	4	11	-18	11	-6	multi-exon	FALSE	canonical	3	427	junction_1	130.244215056008	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGACTGGGCTAGTTTTG	2416	False	NA	34	True	AATAAA	-37	NA	102367647	102371235	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_102367691_102368542_102368582_102368804_102369155_102370605
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062252	chr15	+	1028	3	FSM	ENSMUSG00000023048.14	ENSMUST00000164688.2	1020	3	0	-8	0	0	multi-exon	FALSE	canonical	3	623	junction_2	60	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCTGTGCCATTACCTT	3286	False	NA	18	True	AATAAA	-21	NA	102368517	102371219	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_102368582_102368804_102369155_102370605
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062279	chr15	+	1669	9	FSM	ENSMUSG00000023051.12	ENSMUST00000023813.9	1523	9	-146	0	-44	0	multi-exon	TRUE	canonical	3	312	junction_3	28.7706447616316	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTTCTTTTTTGTTA	NA	False	NA	NA	False	AATAAA	-27	NA	102426747	102432111	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_102427038_102427556_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062293	chr15	+	1451	9	NIC	ENSMUSG00000023051.12	novel	782	8	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	96.5083383703191	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTTCTTTTTTGTTA	NA	False	NA	NA	False	AATAAA	-27	NA	102427207	102432111	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_+_102427280_102427556_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062300	chr15	+	187	1	Intergenic	novelGene_1965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTAAATTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	102435623	102435810	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_102435600_102435800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062319	chr15	+	378	1	FSM	ENSMUSG00000036305.8	ENSMUST00000146505.2	151	1	-60	-167	-60	167	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGACAAACAGACCTTC	NA	False	NA	NA	False	AATAAA	-34	NA	102543412	102543790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_102543400_102543800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062332	chr15	+	198	1	Intergenic	novelGene_1966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGACTCAGTGATGACCC	NA	False	NA	NA	False	NA	NA	NA	102560615	102560813	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_102560600_102560800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062338	chr15	-	688	5	FSM	ENSMUSG00000062683.12	ENSMUST00000185641.7	731	5	48	-5	48	5	multi-exon	FALSE	canonical	3	3206	junction_4	667.870870752723	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTCTCCTGTGTATAT	3949	False	NA	-6	True	AATAAA	-22	NA	102579514	102571293	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_102571564_102573488_102573683_102574197_102574291_102576145_102576215_102579452
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062346	chr15	-	2576	4	NIC	ENSMUSG00000062683.12	novel	731	5	NA	NA	80	0	intron_retention	FALSE	canonical	3	3206	junction_3	741.096634874442	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGAGTCTCCTGTG	3981	False	NA	-11	True	AATAAA	-17	NA	102579482	102571298	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_-_102573683_102574197_102574291_102576145_102576215_102579452
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062356	chr15	-	2756	15	FSM	ENSMUSG00000023055.11	ENSMUST00000023818.11	2824	15	68	0	21	0	multi-exon	FALSE	canonical	3	88	junction_14	14.2851785613836	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGTCATGACGTATGTT	NA	False	NA	-6	True	AATATA	-19	NA	102630545	102615211	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_102615982_102616980_102617088_102617510_102617711_102617877_102617987_102618305_102618402_102618839_102618966_102619348_102619604_102619777_102619934_102622290_102622382_102624176_102624326_102624664_102624824_102626237_102626429_102627408_102627512_102627976_102628157_102630481
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062357	chr15	-	2720	15	NNC	ENSMUSG00000023055.11	novel	2824	15	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_14	29.7561518249348	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGTCATGACGTATGTT	NA	False	NA	-6	True	AATATA	-19	NA	102630538	102615211	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_-_102615982_102616980_102617088_102617510_102617711_102617877_102617987_102618305_102618402_102618839_102618966_102619348_102619604_102619777_102619934_102622290_102622382_102624176_102624326_102624664_102624824_102626237_102626429_102627408_102627512_102627976_102628157_102630510
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062363	chr15	+	240	1	Intergenic	novelGene_1967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAATATTTCCTAAT	NA	False	NA	NA	False	NA	NA	NA	102809569	102809809	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_102809600_102809800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062373	chr15	+	2483	2	FSM	ENSMUSG00000001655.7	ENSMUST00000001700.7	2461	2	-22	0	-22	0	multi-exon	FALSE	canonical	3	47	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTGCTTGGGATCCTT	NA	False	NA	17	True	AATAAA	-25	NA	102829515	102837249	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_102830353_102835603
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062390	chr15	-	3344	4	ISM	ENSMUSG00000036061.11	ENSMUST00000229371.2	3882	7	3762	0	-3	0	3prime_fragment	TRUE	canonical	3	65	junction_3	17.3781471969828	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTTTGCAAATTACT	NA	False	NA	-1	True	NA	NA	NA	103071757	103061716	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr15_-_103064629_103066043_103066346_103066583_103066655_103071698
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062398	chr15	-	3250	3	FSM	ENSMUSG00000036061.11	ENSMUST00000231198.2	491	3	8	-2767	8	-3	multi-exon	FALSE	canonical	3	15	junction_2	46	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTTGTTTTGCAAATT	NA	False	NA	-4	True	NA	NA	NA	103071737	103061719	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_103064629_103066043_103066346_103071698
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062411	chr15	-	8848	5	FSM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	-45	0	-45	0	multi-exon	FALSE	canonical	3	412	junction_4	23.5902522241709	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGTGGTAGTTTGAAG	NA	False	NA	0	True	AATAAA	-22	NA	103148288	103099970	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148159
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062430	chr15	-	188	1	Intergenic	novelGene_1968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGTGTGGTGGTGGACG	NA	False	NA	NA	False	NA	NA	NA	103131233	103131045	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_103131000_103131200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062434	chr15	+	200	1	Intergenic	novelGene_1969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTAACAAAGTATTACTAC	748	False	NA	NA	False	NA	NA	NA	103136585	103136785	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_103136600_103136800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062440	chr15	+	1901	11	NNC	ENSMUSG00000046434.17	novel	3118	13	NA	NA	-496	7	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_1	4002.55468919539	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAACTGTATGGATTTGG	NA	False	NA	6	True	AATAAA	-24	NA	103148362	103153389	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_+_103148545_103148905_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062450	chr15	+	1958	12	NNC	ENSMUSG00000046434.17	novel	3118	13	NA	NA	-399	2	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_1	5195.58052340704	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATGACAACTGTATGGA	NA	False	NA	1	True	AATAAA	-19	NA	103148459	103153384	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_+_103148545_103148905_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152051_103152208_103152385_103152456_103152682
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062481	chr15	+	1446	12	NIC	ENSMUSG00000046434.17	novel	3118	13	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	551	junction_10	5655.9318411501	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCTTGTCTTCCTTTGT	NA	False	NA	17	True	AATAAA	-17	NA	103148858	103155123	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152051_103152208_103152385_103152456_103154772_103154849_103154971
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062483	chr15	+	1763	10	NNC	ENSMUSG00000046434.17	novel	1918	11	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	4261.66086559376	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATGACAACTGTATGGA	NA	False	NA	1	True	AATAAA	-19	NA	103148858	103153384	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150902_103151070_103151146_103152051_103152208_103152385_103152456_103152682
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062484	chr15	+	1764	10	NIC	ENSMUSG00000046434.17	novel	1918	11	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	3	67	junction_8	5026.29424890179	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATGACAACTGTATGGA	NA	False	NA	1	True	AATAAA	-19	NA	103148858	103153384	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152385_103152456_103152682
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062492	chr15	+	1988	9	ISM	ENSMUSG00000046434.17	ENSMUST00000087351.9	1737	10	-22	-2	0	2	intron_retention	FALSE	canonical	3	9291	junction_7	1634.48477642803	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATGACAACTGTATGGA	NA	False	NA	1	True	AATAAA	-19	NA	103148858	103153384	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062521	chr15	+	1707	9	FSM	ENSMUSG00000060992.10	ENSMUST00000100162.5	1676	9	-30	-1	-21	1	multi-exon	FALSE	canonical	3	554	junction_1	173.470458580128	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTGATGGCTCTGTT	NA	False	NA	33	True	AATAAA	-21	NA	103181306	103208296	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_+_103181369_103197527_103197597_103199101_103199184_103199755_103199848_103203148_103203205_103204959_103205038_103205160_103205213_103206313_103206353_103207119
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062529	chr15	+	1687	9	NNC	ENSMUSG00000060992.10	novel	1676	9	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	355.432131355622	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTGTGTGATGGCTC	NA	False	NA	29	True	AATAAA	-17	NA	103181326	103208292	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr15_+_103181369_103197527_103197597_103199101_103199188_103199755_103199848_103203148_103203205_103204959_103205038_103205160_103205213_103206313_103206353_103207119
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062541	chr15	+	214	1	Intergenic	novelGene_1970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCTCTACTTGTGGAAT	NA	False	NA	NA	False	NA	NA	NA	103202734	103202948	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_+_103202700_103202900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062546	chr15	-	2284	7	FSM	ENSMUSG00000000552.11	ENSMUST00000229551.2	2221	7	-42	-21	-42	8	multi-exon	FALSE	canonical	3	115	junction_6	27.1456974286698	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGACTGTCTTTGCTTGC	8774	False	NA	-4	True	AATAAA	-32	NA	103231979	103222313	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_103223653_103223787_103223884_103224053_103224224_103224308_103224552_103226375_103226539_103228716_103228828_103231817
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062563	chr15	-	4411	30	FSM	ENSMUSG00000000555.9	ENSMUST00000023128.8	4382	30	-29	0	-29	0	multi-exon	FALSE	canonical	3	172	junction_15	17.8822280065433	236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCAGTCTGTCCTTCCAT	NA	False	NA	2	True	AATAAA	-28	NA	103275219	103252712	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260106_103260441_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569_103261762_103262000_103262210_103262473_103262527_103262694_103262752_103264352_103264397_103264503_103264549_103264742_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103267476_103267608_103274726
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062579	chr15	-	226	1	Intergenic	novelGene_1971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCCTAGCACCTATATCAA	9348	False	NA	NA	False	NA	NA	NA	103314182	103313956	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr15_-_103314000_103314200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062596	chr15	-	747	7	FSM	ENSMUSG00000022490.8	ENSMUST00000023133.8	1306	7	-2	561	-2	-146	multi-exon	FALSE	canonical	3	176	junction_5	12.4688500761787	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGAGCTTTTCTTCTTTC	2050	False	NA	-38	True	GATAAA	-15	NA	103446432	103439266	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr15_-_103439377_103439780_103439888_103440752_103440909_103441464_103441529_103441883_103441922_103442776_103442838_103446221
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062613	chr16	+	3248	6	FSM	ENSMUSG00000022529.12	ENSMUST00000023176.5	3241	6	2	-9	2	0	multi-exon	FALSE	canonical	3	89	junction_1	57.158026557956	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATAAATCTTTATTGG	NA	False	NA	12	True	AATAAA	-21	NA	3561958	3568654	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_3562632_3563640_3563822_3564285_3564360_3564634_3564759_3566012_3566130_3566575
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062620	chr16	+	3976	6	FSM	ENSMUSG00000022529.12	ENSMUST00000161630.8	3856	6	-120	0	19	0	multi-exon	FALSE	canonical	2	13	junction_1	76.2532622252976	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATAAATCTTTATTGG	NA	False	NA	12	True	AATAAA	-21	NA	3561975	3568654	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_3563377_3563640_3563822_3564285_3564360_3564634_3564759_3566012_3566130_3566575
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062624	chr16	+	208	1	Intergenic	novelGene_1972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCCATGGATAACCTCAC	NA	False	NA	NA	False	NA	NA	NA	3607787	3607995	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_3607800_3608000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062635	chr16	+	1621	12	FSM	ENSMUSG00000014232.15	ENSMUST00000040881.14	1779	12	158	0	-56	0	multi-exon	FALSE	canonical	3	109	junction_6	16.217019933921	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGGCTGCTATTATTAT	3252	False	NA	7	True	AATACA	-17	NA	3726846	3759011	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_3727018_3729314_3729427_3731148_3731234_3733286_3733467_3735689_3735786_3737344_3737429_3741703_3741838_3746353_3746496_3747703_3747777_3751570_3751679_3755422_3755479_3758631
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062651	chr16	+	192	1	Intergenic	novelGene_1973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGCAACCTTGTTGGAG	NA	False	NA	NA	False	NA	NA	NA	3814439	3814631	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_3814400_3814600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062652	chr16	+	208	1	Intergenic	novelGene_1974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATCCCTCCATGGCCTC	NA	False	NA	NA	False	NA	NA	NA	3835649	3835857	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_3835600_3835900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062660	chr16	-	190	1	ISM	ENSMUSG00000084790.2	ENSMUST00000150906.2	565	3	4489	2	4489	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAACTGATTCTCAA	NA	False	NA	NA	False	NA	NA	NA	3850894	3850704	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr16_-_3850700_3850900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062679	chr16	-	3035	17	NIC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	-23	0	intron_retention	TRUE	canonical	3	963	junction_14	113.904410993385	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGACGTTTTCTCTGTTCT	NA	False	NA	-3	True	ATTAAA	-22	NA	3895662	3857834	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062690	chr16	-	184	1	Intergenic	novelGene_1975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGCTTAGAAAGTAGATT	NA	False	NA	NA	False	NA	NA	NA	3913708	3913524	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_3913500_3913700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062711	chr16	-	2181	7	FSM	ENSMUSG00000005718.9	ENSMUST00000005862.9	2247	7	66	0	66	0	multi-exon	TRUE	canonical	3	103	junction_5	11.6010057035299	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTAGTTATTGAGGATG	NA	False	NA	0	True	AATAAA	-22	NA	4377652	4362524	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_4363612_4365118_4365275_4367194_4367336_4369093_4369265_4369609_4369709_4369798_4369965_4377291
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062748	chr16	-	3517	28	FSM	ENSMUSG00000039637.16	ENSMUST00000038552.13	4296	28	29	750	-6	494	multi-exon	TRUE	canonical	3	90	junction_15	10.2195380265448	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGTGCTGCTCCACT	NA	False	NA	0	True	ATTAAA	-17	NA	4497612	4444746	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062771	chr16	+	2611	12	FSM	ENSMUSG00000004069.18	ENSMUST00000060067.12	2648	12	37	0	-7	0	multi-exon	FALSE	canonical	3	184	junction_10	248.960018695956	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	35	True	TTTAAA	-8	NA	4501970	4525559	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4523707_4523825_4524431
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062786	chr16	-	1192	5	FSM	ENSMUSG00000063445.15	ENSMUST00000120056.8	2440	5	-10	1258	-7	0	multi-exon	FALSE	canonical	3	167	junction_4	12.1243556529821	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTTTCCCAAAAGAAAAGG	4833	False	NA	-6	True	AATAAA	-18	NA	4536983	4529180	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_4529468_4531503_4531695_4532280_4532531_4534160_4534400_4536758
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062797	chr16	+	1225	6	FSM	ENSMUSG00000004070.16	ENSMUST00000004172.15	1730	6	12	493	12	0	multi-exon	FALSE	canonical	3	381	junction_2	14.4277510374971	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGCCTAACAGCATTT	NA	False	NA	14	True	AATAAA	-15	NA	4544238	4584113	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_4544336_4580422_4580542_4581592_4581711_4582469_4582962_4583626_4583754_4583841
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062805	chr16	-	198	1	Intergenic	novelGene_1976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACCTCAATAAGTGACAT	NA	False	NA	NA	False	NA	NA	NA	4570618	4570420	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_4570400_4570600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062816	chr16	-	2538	6	FSM	ENSMUSG00000004071.14	ENSMUST00000004173.12	3953	6	49	1366	-6	14	multi-exon	FALSE	canonical	3	434	junction_5	28.1240110937256	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCATGCATTGTTTAAATC	NA	False	NA	0	True	AATAAA	-28	NA	4607805	4584690	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4607694
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062821	chr16	-	3148	5	NIC	ENSMUSG00000004071.14	novel	3953	6	NA	NA	-6	3	intron_retention	FALSE	canonical	3	434	junction_4	30.8139578762612	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTATTTTAGACCATGCA	NA	False	NA	-11	True	AATAAA	-17	NA	4607805	4584701	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_-_4586514_4586608_4587660_4587906_4588016_4588534_4588600_4607694
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062830	chr16	+	191	1	Antisense	novelGene_ENSMUSG00000004071.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTCAGTCAAAGGAAACAA	NA	False	NA	NA	False	NA	NA	NA	4588847	4589038	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr16_+_4588800_4589000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062843	chr16	+	1468	1	Antisense	novelGene_ENSMUSG00000039568.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGACTTGGTGTAAAAGCC	9437	False	NA	NA	False	NA	NA	NA	4693669	4695137	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr16_+_4693700_4695100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062867	chr16	+	3171	17	NIC	ENSMUSG00000022517.18	novel	2519	17	NA	NA	-6	3	combination_of_known_junctions	TRUE	canonical	3	83	junction_12	118.010592744889	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTGCCTTTGTTCTGG	2918	False	NA	17	True	AATAAA	-18	NA	4704106	4756163	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172_4744239_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062877	chr16	+	3097	16	NIC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	107.073474254312	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2926	False	NA	14	True	AATAAA	-15	NA	4704114	4756160	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_+_4704338_4725228_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062894	chr16	+	1280	3	FSM	ENSMUSG00000022516.11	ENSMUST00000230931.2	1618	3	344	-6	-7	6	multi-exon	FALSE	canonical	3	527	junction_2	18	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGAGTGCCATGGCCA	88	False	NA	18	True	AATAAA	-24	NA	4756968	4758889	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_4757158_4757241_4757503_4758059
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062916	chr16	+	201	1	Intergenic	novelGene_1977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGTACTGACATCCAGGA	NA	False	NA	NA	False	NA	NA	NA	4802339	4802540	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_4802300_4802500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062919	chr16	-	203	1	Intergenic	novelGene_1978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTACGTCAGTTTGCTGCA	NA	False	NA	NA	False	TTTAAA	-6	NA	4818973	4818770	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_4818800_4819000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062929	chr16	-	1415	11	FSM	ENSMUSG00000022540.17	ENSMUST00000202281.4	1355	11	-59	-1	-23	1	multi-exon	FALSE	canonical	3	412	junction_7	47.5572286829247	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTGTCTGTCTGTCTG	NA	False	NA	-1	True	AATAAA	-19	NA	4831440	4826592	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828807_4829475_4829557_4830104_4830160_4830290_4830374_4831166_4831239_4831326
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062932	chr16	-	1935	10	NIC	ENSMUSG00000022540.17	novel	1431	11	NA	NA	4	0	intron_retention	FALSE	canonical	3	413	junction_6	42.8808282580778	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCTGTCTGTCTGTCT	NA	False	NA	-2	True	AATAAA	-18	NA	4831413	4826593	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828807_4829475_4830160_4830290_4830374_4831166_4831239_4831326
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062945	chr16	-	3431	17	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	-2	7	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_14	374.363788438131	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATCATTGTACCCAAAT	8108	False	NA	-1	True	AATAAA	-20	NA	4867729	4831765	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866093_4866218_4866613_4866651_4867669
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062959	chr16	-	3298	16	FSM	ENSMUSG00000022536.15	ENSMUST00000023189.15	3280	16	-11	-7	-11	7	multi-exon	FALSE	canonical	3	303	junction_6	221.604291976086	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATCATTGTACCCAAAT	8099	False	NA	-1	True	AATAAA	-20	NA	4867738	4831765	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000062996	chr16	+	208	1	Intergenic	novelGene_1979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCTGAACGTAAGCACAAG	NA	False	NA	NA	False	NA	NA	NA	4860879	4861087	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_4860900_4861100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063008	chr16	+	6335	18	FSM	ENSMUSG00000039473.9	ENSMUST00000230703.2	6356	18	19	2	8	2	multi-exon	FALSE	canonical	3	47	junction_17	11.4435578952107	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTTTCCTCATTTTTT	NA	False	NA	19	True	AATAAA	-19	NA	4867939	4904151	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_4868646_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4899757_4899848_4901919
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063016	chr16	-	2153	10	FSM	ENSMUSG00000023143.11	ENSMUST00000023911.11	2143	10	0	-10	0	10	multi-exon	FALSE	canonical	3	106	junction_1	7.98764478027175	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGCGTGTGAGGTCTGAG	NA	False	NA	NA	False	AATAAA	-25	NA	5021876	5013142	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_5013923_5015418_5015483_5015575_5015678_5016439_5016488_5016594_5016801_5017479_5017609_5017806_5017916_5019237_5019378_5021204_5021664_5021760
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063027	chr16	+	1774	13	FSM	ENSMUSG00000039427.15	ENSMUST00000100196.9	1755	13	-10	-9	-10	0	multi-exon	TRUE	canonical	3	181	junction_11	10.4029910228848	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGCTCTGAGCCTGTG	1270	False	NA	26	True	AATAAA	-27	NA	5051474	5062776	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_5051722_5052829_5052908_5053026_5053131_5054183_5054333_5056508_5056599_5056919_5057031_5057769_5057892_5058007_5058047_5058322_5058383_5059149_5059261_5060352_5060468_5061551_5061628_5062304
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063038	chr16	-	2147	8	FSM	ENSMUSG00000022544.15	ENSMUST00000064635.12	2170	8	23	0	-4	0	multi-exon	FALSE	canonical	3	270	junction_1	73.3462573645565	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGCGCATGTGCACAG	NA	False	NA	-2	True	NA	NA	NA	5073824	5062015	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_5063250_5065316_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063050	chr16	-	4202	7	FSM	ENSMUSG00000022544.15	ENSMUST00000139584.2	987	7	6	-3221	6	-2	multi-exon	FALSE	canonical	3	438	junction_1	22.2517165380311	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGTGCGCATGTGCAC	NA	False	NA	-4	True	NA	NA	NA	5073814	5062017	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063063	chr16	+	201	1	Intergenic	novelGene_1980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTCTCTAAGAATCAAGG	2889	False	NA	NA	False	NA	NA	NA	5083838	5084039	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_5083800_5084000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063109	chr16	-	2878	4	FSM	ENSMUSG00000008393.10	ENSMUST00000008537.10	2858	4	-7	-13	-7	13	multi-exon	TRUE	canonical	3	300	junction_3	44.5146667465405	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTGTGTGTAGTTCTGG	NA	False	NA	2	True	AATAAA	-34	NA	8490026	8476430	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_8478968_8481450_8481574_8482118_8482287_8489976
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063137	chr16	-	4721	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8925	0	at_least_one_novel_splicesite	FALSE	canonical	2	100	junction_31	169.206103657901	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGATGACTGCTGTGGAAG	NA	False	NA	NA	False	AATAAA	-21	NA	8601247	8507463	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8601193
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063163	chr16	+	199	1	Intergenic	novelGene_1981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTTCAATTCCCAACCT	NA	False	NA	NA	False	NA	NA	NA	8550264	8550463	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_8550300_8550500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063170	chr16	-	239	1	Intergenic	novelGene_1982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAAGCAGATTCTCTTG	NA	False	NA	NA	False	NA	NA	NA	8566805	8566566	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_8566600_8566800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063172	chr16	-	727	3	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-64	-42762	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_1	174.5	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCCTGAGTATCACTTTT	NA	False	NA	NA	False	NA	NA	NA	8610236	8566585	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_-_8566919_8574679_8574937_8610099
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063188	chr16	+	196	1	Intergenic	novelGene_1983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAGGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	8605620	8605816	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_8605600_8605800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063192	chr16	+	178	1	Intergenic	novelGene_1984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATTAATATGTTAG	NA	False	NA	NA	False	NA	NA	NA	8616736	8616914	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_8616700_8616900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063198	chr16	-	182	1	Intergenic	novelGene_1985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAGACTATATTTTCT	NA	False	NA	NA	False	NA	NA	NA	8642207	8642025	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_8642000_8642200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063210	chr16	+	3356	4	FSM	ENSMUSG00000022507.7	ENSMUST00000023150.7	4072	4	-5	721	-5	-721	multi-exon	FALSE	canonical	3	157	junction_3	16.3299316185545	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGGTTACTTTTTTCCA	9939	False	NA	22	True	ATTAAA	-17	NA	8647958	8676065	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_8648550_8649184_8649266_8660831_8661108_8673657
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063217	chr16	+	235	1	Intergenic	novelGene_1986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGCACATATCCCTAAGT	NA	False	NA	NA	False	AAAAAG	-34	NA	8678700	8678935	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_8678700_8678900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063229	chr16	-	200	1	Intergenic	novelGene_1987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGATTTTTCCTTTGATG	NA	False	NA	NA	False	NA	NA	NA	8999279	8999079	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_8999100_8999300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063236	chr16	+	189	1	Intergenic	novelGene_1988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGAAATATGAAGTCCTC	NA	False	NA	NA	False	NA	NA	NA	9521640	9521829	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_9521600_9521800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063248	chr16	+	2167	11	NIC	ENSMUSG00000039200.17	novel	2778	11	NA	NA	1	963	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	41.4305442880009	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGTGGCATTTTTCAAA	NA	False	NA	11	True	ATTAAA	-16	NA	10010811	10070305	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029_10055097_10065308_10065462_10069241
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063251	chr16	+	2545	11	FSM	ENSMUSG00000039200.17	ENSMUST00000044005.14	2778	11	236	-3	1	3	multi-exon	FALSE	canonical	3	57	junction_2	27.1632104140877	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTACTGTCTTTTATGA	NA	False	NA	10	True	AATAAA	-18	NA	10010811	10060918	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029_10055097_10058424_10058511_10059409
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063252	chr16	+	3224	11	NNC	ENSMUSG00000039200.17	novel	2778	11	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_10	36.5383360321731	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTACTGTCTTTTATGA	NA	False	NA	10	True	AATAAA	-18	NA	10010811	10060918	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029_10055097_10058424_10058511_10058730
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063265	chr16	-	3439	5	FSM	ENSMUSG00000022505.10	ENSMUST00000078357.5	3440	5	1	0	1	0	multi-exon	FALSE	canonical	3	117	junction_1	14.2894191624432	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAATTGTATGGTGTTTGT	NA	False	NA	-5	True	ATTAAA	-31	NA	10131831	10099612	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_10102480_10103318_10103466_10105918_10106025_10110125_10110289_10131675
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063280	chr16	+	3035	11	FSM	ENSMUSG00000022503.11	ENSMUST00000023146.5	2121	11	-13	-901	-13	901	multi-exon	FALSE	canonical	3	699	junction_1	76.2262422004391	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGTGCTCTTGTTGGGA	NA	False	NA	NA	False	NA	NA	NA	10229798	10243193	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063287	chr16	-	1424	2	FSM	ENSMUSG00000038055.13	ENSMUST00000038281.6	1389	2	-35	0	-35	0	multi-exon	FALSE	canonical	3	61	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTTTGCCTTGTCTGTT	NA	False	NA	0	True	ATTAAA	-20	NA	10360953	10348070	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_10348677_10360135
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063319	chr16	-	3100	12	FSM	ENSMUSG00000022498.17	ENSMUST00000038424.14	3095	12	-5	0	-5	0	multi-exon	FALSE	canonical	3	63	junction_7	19.5329769897639	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGAATGTCATTTAGCATT	8529	False	NA	NA	False	AATAAA	-29	NA	10952519	10892774	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_10893507_10897567_10897649_10902071_10902182_10902614_10902758_10905640_10906434_10909449_10909651_10911679_10911793_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063345	chr16	-	3783	23	FSM	ENSMUSG00000037965.16	ENSMUST00000037633.16	3825	23	34	8	-17	-8	multi-exon	FALSE	canonical	3	82	junction_12	24.8770530528646	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCATAGTTTTGGTGTGG	NA	False	NA	-7	True	AATAAA	-20	NA	10994223	10954463	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10969729_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063352	chr16	+	246	1	Intergenic	novelGene_1989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCTCTAAAGTGATAGGA	NA	False	NA	NA	False	ACTAAA	-23	NA	10975817	10976063	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_10975800_10976100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063385	chr16	-	6830	15	FSM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	-120	-3812	-4	3052	multi-exon	FALSE	canonical	3	773	junction_12	224.149458156465	269	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATGTGCCTCTTTTTTA	NA	False	NA	-3	True	AATAAA	-16	NA	11072193	11034103	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056964_11058529_11058572_11058668_11058705_11071506
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063406	chr16	+	191	1	Intergenic	novelGene_1990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAGGGCTGGTGAGATGG	2711	False	NA	NA	False	NA	NA	NA	11080589	11080780	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_11080600_11080800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063410	chr16	-	205	1	Intergenic	novelGene_1991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTGTTGTGAGAAACCAC	NA	False	NA	NA	False	TTTAAA	-3	NA	11116461	11116256	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_11116300_11116500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063419	chr16	-	347	1	Intergenic	novelGene_1992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAATGATAACATGAA	NA	False	NA	NA	False	NA	NA	NA	11119837	11119490	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_11119500_11119800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063425	chr16	-	2724	4	FSM	ENSMUSG00000065979.13	ENSMUST00000096272.11	2663	4	-22	-39	0	39	multi-exon	FALSE	canonical	3	85	junction_3	6.59966329107444	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTTTCTGAATGTTC	NA	False	NA	-1	True	NA	NA	NA	11727309	11621545	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_11623448_11646038_11646462_11705441_11705661_11727129
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063446	chr16	+	4026	16	ISM	ENSMUSG00000009569.15	ENSMUST00000009713.14	5815	17	47	4224	22	-4224	5prime_fragment	FALSE	canonical	2	22	junction_10	14.5961943289643	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGCAGTTTTTGCTCAG	NA	False	NA	NA	False	AATAAA	-18	NA	13074391	13228703	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr16_+_13074419_13082942_13083004_13144245_13144436_13196127_13196194_13197703_13197760_13199391_13199468_13202057_13202220_13203469_13203649_13212686_13212825_13216087_13216351_13217943_13218044_13218516_13219549_13221018_13221175_13223112_13223272_13223628_13223767_13227480
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063451	chr16	-	2887	24	NNC	ENSMUSG00000022685.10	novel	2906	24	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_14	85.9438643888379	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCTTTAACTGTTCTT	NA	False	NA	-7	True	ATTAAA	-16	NA	13486018	13355823	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_-_13356767_13358918_13359113_13384433_13384603_13420891_13420967_13424011_13424099_13425114_13425171_13443372_13443443_13443977_13444089_13446237_13446314_13447446_13447490_13449393_13449438_13458116_13458195_13465106_13465164_13466282_13466361_13468498_13468542_13469661_13469701_13470508_13470575_13472312_13472458_13474779_13474841_13482519_13482602_13482684_13482753_13483765_13483846_13485397_13485476_13485874
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063453	chr16	-	2911	24	FSM	ENSMUSG00000022685.10	ENSMUST00000058884.10	2906	24	-5	0	-5	0	multi-exon	FALSE	canonical	1	121	junction_21	52.0035988284976	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCTTTAACTGTTCTT	NA	False	NA	-7	True	ATTAAA	-16	NA	13486039	13355823	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_13356767_13358918_13359113_13384433_13384603_13420891_13420967_13424011_13424099_13425114_13425171_13443372_13443443_13443977_13444089_13446237_13446314_13447446_13447490_13449393_13449438_13458116_13458195_13465106_13465164_13466282_13466364_13468498_13468542_13469661_13469701_13470508_13470575_13472312_13472458_13474779_13474841_13482519_13482602_13482684_13482753_13483765_13483846_13485397_13485476_13485874
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063464	chr16	-	193	1	Intergenic	novelGene_1993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATCCATCTTTTTCA	NA	False	NA	1	True	AATAAA	-13	NA	13380737	13380544	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_13380500_13380700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063473	chr16	+	205	1	Intergenic	novelGene_1994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAAAAACACCTGAACATC	NA	False	NA	NA	False	NA	NA	NA	13432631	13432836	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_13432600_13432800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063480	chr16	+	188	1	Intergenic	novelGene_1995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCGTAGCCTAGTCAAAAC	NA	False	NA	NA	False	NA	NA	NA	13460252	13460440	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_13460300_13460400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063485	chr16	+	2903	8	FSM	ENSMUSG00000022684.16	ENSMUST00000023365.13	3003	8	100	0	8	0	multi-exon	TRUE	canonical	3	82	junction_1	10.7760126660835	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTATAGAGAAATCTGAT	NA	False	NA	NA	False	AATAAA	-24	NA	13489821	13521476	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619_13506790_13510296_13510442_13515196_13515371_13516736_13516940_13519928
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063503	chr16	-	178	1	Intergenic	novelGene_1996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATTATATATTTAC	NA	False	NA	NA	False	NA	NA	NA	13544032	13543854	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_13543900_13544000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063508	chr16	+	186	1	Intergenic	novelGene_1997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAACCAGACATACACATA	NA	False	NA	NA	False	NA	NA	NA	13562810	13562996	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_13562800_13563000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063518	chr16	-	204	1	Intergenic	novelGene_1998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTTATCTCAGTACAAAAA	NA	False	NA	7	True	NA	NA	NA	13581403	13581199	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_13581200_13581400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063525	chr16	+	199	1	Intergenic	novelGene_1999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTATGATGTAGTCACCAA	NA	False	NA	NA	False	NA	NA	NA	13583322	13583521	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_13583300_13583500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063536	chr16	+	239	1	Intergenic	novelGene_2000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCCAGCACAGCCAGAACT	NA	False	NA	NA	False	NA	NA	NA	13585512	13585751	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_13585500_13585800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063560	chr16	+	191	1	Intergenic	novelGene_2001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGCAGTGCCAGCCAGT	NA	False	NA	NA	False	NA	NA	NA	13627735	13627926	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_13627700_13627900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063576	chr16	+	1111	10	FSM	ENSMUSG00000022681.16	ENSMUST00000023362.15	1175	10	63	1	8	-1	multi-exon	FALSE	canonical	3	538	junction_1	69.8729004852541	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTAGATGACTTTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	13637177	13653314	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_13637301_13644746_13644850_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063603	chr16	-	3305	23	NNC	ENSMUSG00000022680.15	novel	3178	23	NA	NA	15	0	at_least_one_novel_splicesite	TRUE	canonical	3	58	junction_21	35.4486300426522	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGTAACTTTTGAATAA	10003	False	NA	NA	False	NA	NA	NA	13720976	13653455	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_-_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702493_13705560_13705635_13720778
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063613	chr16	+	202	1	Intergenic	novelGene_2002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	291	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACTGACTGCTCTTCCA	NA	False	NA	NA	False	NA	NA	NA	13691478	13691680	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_13691500_13691700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063624	chr16	+	2264	4	FSM	ENSMUSG00000022679.14	ENSMUST00000023360.14	3087	4	30	793	0	3	multi-exon	FALSE	canonical	3	154	junction_1	20.3960780543711	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTGGGTATTGTCATTT	521	False	NA	12	True	NA	NA	NA	13758558	13766449	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_13758888_13762529_13762601_13764421_13764452_13764615
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063632	chr16	+	213	1	ISM	ENSMUSG00000022679.14	ENSMUST00000128757.8	3089	4	46005	241	8072	0	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAGAACTCTCAGCTCC	8992	False	NA	NA	False	NA	NA	NA	13767029	13767242	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr16_+_13767000_13767200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063641	chr16	+	201	1	Intergenic	novelGene_2003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCCATAGTTTAATACCT	NA	False	NA	NA	False	NA	NA	NA	13795851	13796052	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_13795900_13796100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063653	chr16	-	217	1	Intergenic	novelGene_2004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGAAGATACTAGATGGT	NA	False	NA	NA	False	NA	NA	NA	13808980	13808763	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_13808800_13809000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063661	chr16	+	2280	9	FSM	ENSMUSG00000022678.17	ENSMUST00000023359.13	2287	9	7	0	-5	0	multi-exon	FALSE	canonical	3	240	junction_8	30.8696857774743	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGTGCATTGTATAT	NA	False	NA	96	True	AATAAA	-18	NA	13981145	14010792	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009581
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063671	chr16	+	2392	9	FSM	ENSMUSG00000022678.17	ENSMUST00000115795.9	2335	9	-47	-10	0	0	multi-exon	FALSE	canonical	3	25	junction_8	91.5818452260054	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGTGCATTGTATAT	NA	False	NA	96	True	AATAAA	-18	NA	13981161	14010792	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009453
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063679	chr16	+	177	1	Intergenic	novelGene_2005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGAGTGACGAGCAGGG	NA	False	NA	NA	False	NA	NA	NA	13984681	13984858	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_13984700_13984900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063686	chr16	-	190	1	Intergenic	novelGene_2006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAATTGCATTAAA	NA	False	NA	NA	False	NA	NA	NA	14021698	14021508	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_14021500_14021700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063715	chr16	+	5946	31	FSM	ENSMUSG00000023088.18	ENSMUST00000100167.10	6792	31	-16	862	-14	833	multi-exon	FALSE	canonical	3	92	junction_2	17.5139626837814	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACCATTTTATTTTTATTT	7142	False	NA	20	True	AGTAAA	-26	NA	14179407	14292739	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_14179508_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063726	chr16	+	187	1	Intergenic	novelGene_2007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTACGAAGACATCCATGT	NA	False	NA	NA	False	NA	NA	NA	14302430	14302617	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_14302400_14302600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063729	chr16	-	181	1	Intergenic	novelGene_2008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATTTTAAGACTATAAC	NA	False	NA	NA	False	NA	NA	NA	14446776	14446595	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_14446600_14446800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063734	chr16	+	188	1	Intergenic	novelGene_2009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTCTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	15336387	15336575	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_15336400_15336600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063737	chr16	-	4549	4	FSM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	3	-345	3	-255	multi-exon	FALSE	canonical	3	110	junction_1	627.165050046636	251	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGACCATTTTGTAAAAT	NA	False	NA	NA	False	AATAAA	-28	NA	15412385	15370195	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15412323
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063756	chr16	+	204	1	Intergenic	novelGene_2010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	416	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTTTCATTCACAAATGA	NA	False	NA	NA	False	NA	NA	NA	15401553	15401757	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_15401600_15401800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063766	chr16	+	188	1	Intergenic	novelGene_2011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTTGGGATACAACTAGA	NA	False	NA	NA	False	NA	NA	NA	15413956	15414144	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_15414000_15414100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063770	chr16	-	3600	16	FSM	ENSMUSG00000022673.6	ENSMUST00000023353.4	3589	16	-10	-1	-10	1	multi-exon	TRUE	canonical	3	1276	junction_6	130.715909088714	348	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAAGTAGGCATTAATGT	NA	False	NA	NA	False	AATAAA	-21	NA	15455274	15441759	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063784	chr16	-	228	1	Intergenic	novelGene_2012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAATGAGTGTAATTTCT	NA	False	NA	NA	False	NA	NA	NA	15477173	15476945	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_15476900_15477200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063795	chr16	-	642	3	FSM	ENSMUSG00000022671.14	ENSMUST00000023351.11	1035	3	391	2	-234	0	multi-exon	FALSE	canonical	3	566	junction_1	21	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTATGTGGAGTCCTGGT	NA	False	NA	-4	True	ATTAAA	-20	NA	15680820	15666306	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_15666594_15680261_15680408_15680611
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063805	chr16	-	3283	20	FSM	ENSMUSG00000041974.11	ENSMUST00000040248.9	3282	20	-1	0	-1	0	multi-exon	FALSE	canonical	3	251	junction_3	29.6569490345649	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGTGGTTTTAGTGTT	1946	False	NA	0	True	AATAAA	-18	NA	15964716	15707087	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063818	chr16	+	2956	13	FSM	ENSMUSG00000041957.16	ENSMUST00000039408.3	2918	13	-40	2	-40	-2	multi-exon	FALSE	canonical	3	76	junction_4	18.1995115929583	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTCTGTGACCTTCGA	NA	False	NA	17	True	AATAAA	-17	NA	16031141	16090574	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_16031460_16043164_16043278_16043583_16044156_16048504_16048641_16058363_16058572_16064729_16064908_16078189_16078308_16079467_16079633_16080428_16080603_16085040_16085195_16086381_16086572_16087548_16087637_16090032
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063857	chr16	-	4104	20	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-40	2	combination_of_known_junctions	FALSE	canonical	3	417	junction_5	244.836267297011	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTGATGTGCTTCAA	NA	False	NA	-5	True	AATAAA	-31	NA	16176863	16130091	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063863	chr16	-	4015	19	NIC	ENSMUSG00000022789.16	novel	2151	19	NA	NA	-29	2	combination_of_known_junctions	FALSE	canonical	3	332	junction_5	248.085384544699	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTGATGTGCTTCAA	NA	False	NA	-5	True	AATAAA	-31	NA	16176852	16130091	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063897	chr16	+	217	1	Intergenic	novelGene_2013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTAGATTTGCCAGAACA	NA	False	NA	NA	False	NA	NA	NA	16362757	16362974	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_16362800_16363000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063914	chr16	+	2955	19	FSM	ENSMUSG00000022779.17	ENSMUST00000232581.2	2950	19	-4	-1	-4	1	multi-exon	TRUE	canonical	3	71	junction_1	102.489023802552	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGAGCCTGGGACCTTTT	NA	False	NA	NA	False	ATTAAA	-28	NA	16688616	16710850	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_16688694_16692935_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063930	chr16	+	2942	19	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	108.44980917969	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGAGCCTGGGACCTTTT	NA	False	NA	NA	False	ATTAAA	-28	NA	16688632	16710850	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_+_16688694_16692932_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063948	chr16	+	384	1	ISM	ENSMUSG00000022779.17	ENSMUST00000023465.16	3073	18	21822	4	1101	1	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGAGCCTGGGACCTTTT	NA	False	NA	NA	False	ATTAAA	-28	NA	16710466	16710850	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr16_+_16710500_16710800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063966	chr16	+	5086	9	FSM	ENSMUSG00000063358.18	ENSMUST00000069107.14	5099	9	13	0	13	0	multi-exon	FALSE	canonical	3	513	junction_8	49.657420140398	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTCTCACTGTGTTGCC	NA	False	NA	17	True	AAAAAG	-33	NA	16801258	16865317	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856304_16861549
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063975	chr16	+	1934	8	FSM	ENSMUSG00000063358.18	ENSMUST00000115731.10	1747	8	-165	-22	20	22	multi-exon	FALSE	canonical	3	566	junction_5	32.3728281124773	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTGAAAGGATAGAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	16801265	16856926	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063977	chr16	+	2902	9	FSM	ENSMUSG00000063358.18	ENSMUST00000232611.2	2390	9	20	-532	20	532	multi-exon	FALSE	canonical	3	119	junction_8	172.340097989412	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAAGATTCAGTGTTGATT	NA	False	NA	36	True	AATAAA	-26	NA	16801265	16863145	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856299_16861549
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000063996	chr16	+	177	1	Intergenic	novelGene_2014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATCTGCAAGCCGGG	3964	False	NA	NA	False	NA	NA	NA	16874959	16875136	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_16875000_16875100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064014	chr16	-	2198	21	FSM	ENSMUSG00000022771.18	ENSMUST00000023455.14	2333	21	15	120	0	-119	multi-exon	FALSE	canonical	3	214	junction_1	124.441592725262	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTTCTGATCTCTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	16929106	16904538	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_16905078_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064021	chr16	-	1812	20	FSM	ENSMUSG00000022771.18	ENSMUST00000231712.2	3088	20	-10	1286	5	4	multi-exon	FALSE	canonical	3	631	junction_7	49.1072657119735	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGCCGTGGTCTCTGC	NA	False	NA	0	True	NA	NA	NA	16929116	16906465	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064031	chr16	+	194	1	Intergenic	novelGene_2015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCACTAGAGAGATGGTC	NA	False	NA	NA	False	NA	NA	NA	16924487	16924681	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_16924500_16924700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064040	chr16	-	1298	8	FSM	ENSMUSG00000049916.13	ENSMUST00000093336.8	1266	8	-32	0	2	0	multi-exon	FALSE	canonical	3	35	junction_7	117.062516003464	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTGTATGTCCTCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	16943002	16931261	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16938944_16939159_16939416_16941375_16941519_16942853
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064043	chr16	-	1130	7	NNC	ENSMUSG00000049916.13	novel	1266	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_6	94.3705756873166	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTGTATGTCCTCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	16943002	16931261	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16938944_16939159_16939416_16942878
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064056	chr16	-	1157	7	FSM	ENSMUSG00000049916.13	ENSMUST00000231681.2	1156	7	0	-1	0	0	multi-exon	FALSE	canonical	3	255	junction_4	26.8824602048746	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTGTATGTCCTCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	16943004	16931261	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16938944_16939159_16939416_16942853
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064063	chr16	-	1087	3	FSM	ENSMUSG00000022769.10	ENSMUST00000023453.10	1108	3	21	0	21	0	multi-exon	FALSE	canonical	2	125	junction_1	37.5	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGAGTGCATGAGATGTG	NA	False	NA	-10	True	AATAAA	-18	NA	16950226	16948001	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_16948653_16949460_16949658_16949987
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064083	chr16	+	1481	4	ISM	ENSMUSG00000041774.17	ENSMUST00000069064.7	1297	5	-3	0	0	0	intron_retention	TRUE	canonical	3	70	junction_3	17.4547032821147	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCTGGTTTATAAAGTG	NA	False	NA	12	True	AATAAA	-16	NA	16964839	16966710	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr16_+_16965011_16965096_16965257_16965461_16965562_16965660
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064092	chr16	-	2615	4	FSM	ENSMUSG00000038965.18	ENSMUST00000090192.12	2609	4	-6	0	-6	0	multi-exon	FALSE	canonical	3	1494	junction_3	290.114153777823	453	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGGTGTATGGGTTTCT	NA	False	NA	-1	True	AATAAA	-18	NA	17019362	16969878	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_16972147_16977853_16978041_16994275_16994372_17019298
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064100	chr16	+	202	1	Intergenic	novelGene_2016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATACCTAATCCCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	17004201	17004403	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_17004200_17004400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064125	chr16	+	1413	10	FSM	ENSMUSG00000055692.22	ENSMUST00000164950.11	1631	10	218	0	-14	0	multi-exon	TRUE	canonical	3	122	junction_4	58.6725586266908	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGGTTTCATC	NA	False	NA	38	True	AATAAA	-23	NA	17094158	17096525	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_17094333_17094497_17094622_17094700_17094752_17094825_17094904_17095057_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17095835
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064160	chr16	+	214	1	Intergenic	novelGene_2017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAACCCTGACTAAGA	5146	False	NA	NA	False	TTTAAA	-11	NA	17186787	17187001	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_17186800_17187000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064178	chr16	+	5063	3	FSM	ENSMUSG00000006134.5	ENSMUST00000006293.5	5042	3	-20	-1	-20	1	multi-exon	FALSE	canonical	3	254	junction_1	8	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGTGTTTCAGTGTCTCC	3439	False	NA	21	True	AATAAA	-28	NA	17269830	17305299	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_17270653_17286756_17287223_17301524
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064188	chr16	-	199	1	Intergenic	novelGene_2018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAATTGGTGAGAAA	7342	False	NA	NA	False	NA	NA	NA	17274172	17273973	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_17274000_17274200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064195	chr16	+	184	1	Intergenic	novelGene_2019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAAGAATGGCACCCAG	NA	False	NA	NA	False	NA	NA	NA	17293480	17293664	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_17293500_17293700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064199	chr16	+	181	1	Intergenic	novelGene_2020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAAGGAGGGGGAGG	NA	False	NA	NA	False	NA	NA	NA	17326112	17326293	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_17326100_17326300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064208	chr16	+	3111	21	FSM	ENSMUSG00000022761.13	ENSMUST00000023444.11	3394	21	283	0	-2	0	multi-exon	FALSE	canonical	2	77	junction_5	14.8690113995518	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTCTCCGAGTCTTCT	NA	False	NA	32	True	NA	NA	NA	17326834	17344197	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17337250_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17340588_17340831_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064213	chr16	-	1082	5	FSM	ENSMUSG00000022760.18	ENSMUST00000100125.12	1248	5	70	96	-11	0	multi-exon	FALSE	canonical	3	43	junction_4	27.8118679703468	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTTTGGCTTGGCTGG	7256	False	NA	1	True	AATAAA	-19	NA	17348930	17345941	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_17346605_17346798_17346940_17348093_17348250_17348641_17348722_17348888
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064224	chr16	+	180	1	Intergenic	novelGene_2021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAAACCTTTTGCCT	4577	False	NA	NA	False	NA	NA	NA	17410859	17411039	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_17410900_17411000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064255	chr16	-	3251	17	FSM	ENSMUSG00000012114.18	ENSMUST00000080936.14	3230	17	-11	-10	0	0	multi-exon	TRUE	canonical	3	37	junction_9	64.8068946467118	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCATCTACCTTTT	NA	False	NA	-13	True	AATAAA	-26	NA	17540772	17469074	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17540619
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064256	chr16	-	3175	17	NIC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_13	54.6468420290688	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCATCTACCTTTT	NA	False	NA	-13	True	AATAAA	-26	NA	17540789	17469074	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17501022_17501053_17503316_17503369_17515470_17515559_17540619
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064281	chr16	+	123	1	Intergenic	novelGene_2022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	265	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGTATGACAAAACTTAAA	NA	False	NA	NA	False	NA	NA	NA	17542216	17542339	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_17542200_17542300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064293	chr16	+	236	1	Intergenic	novelGene_2023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTAAGTCCAATTAGTG	NA	False	NA	NA	False	NA	NA	NA	17549030	17549266	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_17549000_17549300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064295	chr16	+	2621	7	NIC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	178	junction_1	113.988912716203	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCTACAGTCTGAGTTT	NA	False	NA	19	True	AATAAA	-28	NA	17577469	17611246	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_+_17577559_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064306	chr16	+	2589	7	FSM	ENSMUSG00000022750.19	ENSMUST00000165790.9	2544	7	-27	-18	-13	0	multi-exon	FALSE	canonical	0	0	junction_1	179.822520527572	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCTACAGTCTGAGTTT	NA	False	NA	19	True	AATAAA	-28	NA	17577513	17611246	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_17577571_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064317	chr16	+	3116	7	NNC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	149.069335098358	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCTACAGTCTGAGTTT	NA	False	NA	19	True	AATAAA	-28	NA	17577534	17611246	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_+_17578119_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064327	chr16	+	3212	7	NIC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	164.993350034344	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCTACAGTCTGAGTTT	NA	False	NA	19	True	AATAAA	-28	NA	17577534	17611246	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_+_17578215_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064343	chr16	-	4052	10	FSM	ENSMUSG00000003166.21	ENSMUST00000117945.8	4003	10	-49	0	-16	0	multi-exon	TRUE	canonical	3	236	junction_7	73.3575717518876	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	-2	True	AATAAA	-18	NA	17709573	17658218	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064368	chr16	-	2809	10	FSM	ENSMUSG00000003527.10	ENSMUST00000003621.10	2821	10	12	0	12	0	multi-exon	FALSE	canonical	3	145	junction_7	18.4397584408805	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTTTCTATCAATTGT	NA	False	NA	0	True	NA	NA	NA	17729200	17718572	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_17720188_17720681_17720798_17722865_17722976_17724134_17724238_17724972_17725107_17725383_17725502_17725613_17725787_17727768_17727865_17727951_17728121_17729025
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064395	chr16	-	1715	8	NIC	ENSMUSG00000003528.16	novel	1666	9	NA	NA	19	0	intron_retention	FALSE	canonical	3	1593	junction_7	131.986393856584	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCTGTCCATCCCTTTG	NA	False	NA	-21	True	AATAAA	-16	NA	17746054	17743086	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745017_17745157_17745230_17745517_17745849
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064415	chr16	+	5250	1	Intergenic	novelGene_2024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTTTCTTGTGGGTGA	NA	False	NA	13	True	NA	NA	NA	17829605	17834855	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_17829600_17834900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064427	chr16	+	1042	5	FSM	ENSMUSG00000003531.16	ENSMUST00000151266.8	1086	5	24	20	-16	0	multi-exon	FALSE	canonical	3	350	junction_3	38.8546972707291	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCTGTGCTACCTAG	NA	False	NA	10	True	AATAAA	-16	NA	17884290	17889207	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_17884464_17884559_17884721_17887287_17887389_17887954_17888096_17888741
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064439	chr16	-	2268	14	FSM	ENSMUSG00000003526.13	ENSMUST00000003620.13	2386	14	118	0	-11	0	multi-exon	FALSE	canonical	3	102	junction_5	13.1900087703135	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTTCTCTTGGTACCT	8061	False	NA	0	True	AATAAA	-20	NA	17907038	17889588	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898392_17898789_17898940_17899394_17899430_17902410_17902620_17906751
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064454	chr16	-	3398	11	FSM	ENSMUSG00000060166.7	ENSMUST00000076957.7	4868	11	-5	1475	-5	-710	multi-exon	FALSE	canonical	3	49	junction_5	10.6494131293701	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGAGCCTTTCCTTGGGC	NA	False	NA	0	True	AAAAAG	-10	NA	18053005	18040091	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_18041242_18042081_18043080_18044322_18044433_18044509_18044631_18044916_18045053_18045218_18045311_18045639_18045743_18045922_18046096_18046177_18046336_18046498_18046621_18052770
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064461	chr16	-	4238	10	NIC	ENSMUSG00000060166.7	novel	4868	11	NA	NA	-5	-710	intron_retention	FALSE	canonical	3	49	junction_4	10.5771708509354	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGAGCCTTTCCTTGGGC	NA	False	NA	0	True	AAAAAG	-10	NA	18053005	18040091	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_-_18043080_18044322_18044433_18044509_18044631_18044916_18045053_18045218_18045311_18045639_18045743_18045922_18046096_18046177_18046336_18046498_18046621_18052770
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064467	chr16	-	1208	6	FSM	ENSMUSG00000005732.15	ENSMUST00000115645.10	1085	6	-118	-5	-118	5	multi-exon	FALSE	canonical	3	10558	junction_4	1553.51498222579	2549	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAAGGCTATGTGAGGGG	7015	False	NA	4	True	AATAAA	-27	NA	18066714	18057642	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18066411
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064484	chr16	+	2359	12	FSM	ENSMUSG00000022721.20	ENSMUST00000115640.8	2367	12	8	0	8	0	multi-exon	FALSE	canonical	3	222	junction_1	22.0168980933485	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGGTGAACCAGAGC	277	False	NA	8	True	AATAAA	-22	NA	18066754	18071366	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_18067116_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064493	chr16	+	2284	12	NNC	ENSMUSG00000022721.20	novel	2367	12	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.6614186759067	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTGGTGAACCAGAG	356	False	NA	7	True	AATAAA	-21	NA	18066833	18071365	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_+_18067121_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064512	chr16	-	4233	14	NNC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	8	-3	at_least_one_novel_splicesite	TRUE	canonical	2	13	junction_13	51.9562856765356	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGGCTGGTTTCTTTCTT	NA	False	NA	-3	True	CATAAA	-14	NA	18107087	18071814	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18107027
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064518	chr16	+	195	1	Intergenic	novelGene_2025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTGAGTAGCTAACAGAT	NA	False	NA	NA	False	NA	NA	NA	18078582	18078777	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_18078600_18078800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064523	chr16	+	202	1	Intergenic	novelGene_2026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGGATGTTACCCTTTG	NA	False	NA	NA	False	NA	NA	NA	18082786	18082988	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_18082800_18083000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064534	chr16	-	1593	9	NIC	ENSMUSG00000013539.15	novel	1622	9	NA	NA	-4	4	combination_of_known_junctions	FALSE	canonical	3	52	junction_8	63.9256159532311	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGGCTTTTTCTAAAAAA	NA	False	NA	0	True	AATAAA	-20	NA	18161774	18118684	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833_18125905_18128732_18128848_18130502_18130623_18134509_18134599_18142220_18142315_18161661
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064539	chr16	-	1496	9	FSM	ENSMUSG00000013539.15	ENSMUST00000115628.10	1622	9	128	-2	0	0	multi-exon	FALSE	canonical	3	71	junction_8	57.8273291792038	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTGGCTTTTTCTAA	NA	False	NA	-4	True	AATAAA	-16	NA	18161778	18118688	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833_18125905_18128732_18128848_18130502_18130623_18134509_18134599_18142220_18142315_18161758
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064559	chr16	+	198	1	Intergenic	novelGene_2027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAAGTGGCATTAGCTGC	NA	False	NA	NA	False	NA	NA	NA	18162856	18163054	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_18162900_18163100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064564	chr16	+	3973	19	FSM	ENSMUSG00000118669.2	ENSMUST00000239533.1	4698	19	14	711	14	109	multi-exon	FALSE	canonical	3	22	junction_2	90.4391378459624	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGTCTTCTGCCTTGG	NA	False	NA	12	True	ATTAAA	-15	NA	18166059	18225115	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_18166321_18170649_18170702_18207024_18207256_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064567	chr16	-	185	1	Intergenic	novelGene_2028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCCACAGACAAAGATGTA	NA	False	NA	NA	False	NA	NA	NA	18173088	18172903	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_18172900_18173100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064589	chr16	+	1891	18	FSM	ENSMUSG00000075704.18	ENSMUST00000115606.9	1905	18	14	0	-7	0	multi-exon	FALSE	canonical	3	67	junction_11	21.0007414599702	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGCGTGTGCTGTCCCC	NA	False	NA	NA	False	AATAAA	-21	NA	18245180	18297823	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262025_18272470_18272491_18273238_18273331_18274773_18274949_18287499_18287637_18290903_18291000_18291543_18291637_18293431_18293504_18294271_18294370_18296400_18296608_18297607
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064594	chr16	+	554	4	FSM	ENSMUSG00000075704.18	ENSMUST00000131303.8	532	4	-22	0	-1	0	multi-exon	FALSE	canonical	3	135	junction_1	7.03957069398096	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCCCTGACTGTCTCT	NA	False	NA	12	True	NA	NA	NA	18245189	18256562	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064596	chr16	-	188	2	Antisense	novelGene_ENSMUSG00000116842.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCCATTTTTTTAAATAA	7190	False	NA	NA	False	NA	NA	NA	18393644	18257817	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr16_-_18257954_18393592
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064601	chr16	-	196	1	Intergenic	novelGene_2029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGTTGTTTTTAAGGA	NA	False	NA	NA	False	NA	NA	NA	18263948	18263752	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_18263800_18263900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064607	chr16	+	191	1	Intergenic	novelGene_2030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGGAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	18313082	18313273	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_18313100_18313300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064616	chr16	+	1400	8	FSM	ENSMUSG00000000884.18	ENSMUST00000231621.2	1485	8	89	-4	18	2	multi-exon	FALSE	canonical	3	66	junction_1	85.0267664938998	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCAAGGTGGGAACTTCC	NA	False	NA	19	True	AATAAA	-21	NA	18317551	18383294	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_18317602_18317795_18317891_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064622	chr16	+	1429	8	FSM	ENSMUSG00000000884.18	ENSMUST00000090086.11	3549	8	-15	2135	-5	2	multi-exon	FALSE	canonical	3	212	junction_1	38.76564858485	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCAAGGTGGGAACTTCC	NA	False	NA	19	True	AATAAA	-21	NA	18317622	18383294	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_18317702_18317795_18317891_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064632	chr16	+	193	1	Intergenic	novelGene_2031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCCATTAACCAAAGTACAA	NA	False	NA	NA	False	NA	NA	NA	18329874	18330067	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_18329900_18330100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064639	chr16	-	179	1	Intergenic	novelGene_2032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATTTTTTATTTTGTC	NA	False	NA	NA	False	NA	NA	NA	18507285	18507106	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_18507100_18507300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064644	chr16	-	1919	19	ISM	ENSMUSG00000000028.16	ENSMUST00000000028.14	2143	20	320	-2	-26	2	3prime_fragment	TRUE	canonical	3	368	junction_7	53.1151788307469	334	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTCTGTGATCTTATTGG	NA	False	NA	0	True	AATAAA	-23	NA	18630402	18599194	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18627481_18627620_18629138_18629232_18630054_18630115_18630264
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064657	chr16	-	228	1	Intergenic	novelGene_2033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATATATATTCAGAGA	NA	False	NA	NA	False	AATAAA	-34	NA	18606505	18606277	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_18606300_18606500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064669	chr16	+	1985	12	FSM	ENSMUSG00000005262.14	ENSMUST00000005394.13	1996	12	7	4	0	1	multi-exon	FALSE	canonical	3	393	junction_10	35.0072011482124	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGTTTGATATGGTATG	NA	False	NA	6	True	AATAAA	-16	NA	18631050	18654007	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_18631168_18633579_18633713_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064682	chr16	+	1282	3	FSM	ENSMUSG00000071632.11	ENSMUST00000055413.13	1281	3	-1	0	-1	0	multi-exon	FALSE	canonical	3	86	junction_1	45.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTCTCAATTAGGGTT	NA	False	NA	17	True	ATTAAA	-17	NA	18655326	18658910	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_18655370_18655455_18655624_18657839
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064684	chr16	+	1337	3	NNC	ENSMUSG00000071632.11	novel	1281	3	NA	NA	-1	0	intron_retention	TRUE	canonical	0	0	junction_2	88.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTCTCAATTAGGGTT	NA	False	NA	17	True	ATTAAA	-17	NA	18655326	18658910	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_+_18655624_18657839_18658618_18658648
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064688	chr16	+	1248	4	NNC	ENSMUSG00000071632.11	novel	1281	3	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	72.2695571377664	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTCTCAATTAGGGTT	NA	False	NA	17	True	ATTAAA	-17	NA	18655329	18658910	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_+_18655370_18655455_18655624_18657839_18658618_18658648
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064692	chr16	+	1365	2	FSM	ENSMUSG00000071632.11	ENSMUST00000190776.2	930	2	-75	-360	-1	0	multi-exon	FALSE	canonical	3	177	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTCTCAATTAGGGTT	NA	False	NA	17	True	ATTAAA	-17	NA	18655329	18658910	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_18655624_18657839
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064714	chr16	+	197	1	Intergenic	novelGene_2034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGCCCTACAGCTGGA	NA	False	NA	NA	False	NA	NA	NA	18659225	18659422	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_18659200_18659400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064718	chr16	+	252	1	Intergenic	novelGene_2035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATATATGCAGCTAGAGT	NA	False	NA	NA	False	NA	NA	NA	18660897	18661149	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_18660900_18661100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064721	chr16	-	218	1	Intergenic	novelGene_2036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTGGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	18665997	18665779	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_18665800_18666000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064735	chr16	-	982	4	FSM	ENSMUSG00000022706.17	ENSMUST00000023391.16	1280	4	299	-1	-24	1	multi-exon	FALSE	canonical	3	1642	junction_3	87.6711025493704	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCGTTTATTTTAATCA	NA	False	NA	-6	True	AATAAA	-16	NA	18695313	18690766	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_18691413_18692286_18692446_18694073_18694158_18695220
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064746	chr16	+	4057	25	FSM	ENSMUSG00000022702.17	ENSMUST00000004222.14	4218	25	161	0	-43	0	multi-exon	TRUE	canonical	3	33	junction_15	30.9156277902725	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTGCCTTCCCTGCCTT	NA	False	NA	7	True	AATAAA	-23	NA	18695976	18789059	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_18696270_18713523_18713587_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064748	chr16	+	4260	25	NIC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_15	33.301547344764	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTGCCTTCCCTGCCTT	NA	False	NA	7	True	AATAAA	-23	NA	18695982	18789059	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_+_18696270_18713523_18713587_18715203_18715524_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064780	chr16	+	205	1	Intergenic	novelGene_2037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATATTTGTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19914277	19914482	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_19914300_19914500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064793	chr16	+	4386	8	FSM	ENSMUSG00000062901.4	ENSMUST00000023509.5	8172	8	32	3754	0	-3754	multi-exon	FALSE	canonical	3	70	junction_2	11.8562822407122	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATTTTAGTATTTTTG	NA	False	NA	NA	False	AGTAAA	-1	NA	19916323	19944217	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_19916422_19920741_19920805_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064799	chr16	+	181	1	Intergenic	novelGene_2038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGTTTCTCCCTCTCATT	NA	False	NA	NA	False	NA	NA	NA	19919168	19919349	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_19919200_19919300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064822	chr16	+	5967	30	FSM	ENSMUSG00000041215.17	ENSMUST00000090052.11	5997	30	30	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	34.7469534332064	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGAGCTGGAAGCACC	NA	False	NA	16	True	AATAAA	-22	NA	19959842	20051323	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_19959986_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064832	chr16	+	200	1	Genic_Genomic	ENSMUSG00000041215.17	novel	NA	NA	NA	NA	-1987	22	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTCTTAACCTCTTCAA	NA	False	NA	NA	False	NA	NA	NA	20009728	20009928	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr16_+_20009700_20009900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064842	chr16	-	3237	3	FSM	ENSMUSG00000041205.9	ENSMUST00000040880.9	3280	3	32	11	32	-11	multi-exon	FALSE	canonical	3	61	junction_2	5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAGAAGAGTATTCAATA	NA	False	NA	NA	False	AATAAA	-18	NA	20060076	20052063	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_20054790_20055336_20055455_20059683
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064856	chr16	-	1354	10	FSM	ENSMUSG00000033918.17	ENSMUST00000048642.15	1348	10	-6	0	-6	0	multi-exon	FALSE	canonical	3	1528	junction_6	107.954723019524	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTCGTTCCTTCAGAG	NA	False	NA	-16	True	AATAAA	-24	NA	20121143	20098569	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20112103_20112153_20116342_20116484_20116880_20117077_20120958
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064860	chr16	+	189	1	Intergenic	novelGene_2039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAGTTAAGAGAAAAGGAG	2812	False	NA	NA	False	NA	NA	NA	20115322	20115511	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_20115300_20115500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064872	chr16	+	195	1	Intergenic	novelGene_2040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTTCAATCACCCTAGA	2544	False	NA	NA	False	NA	NA	NA	20126373	20126568	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_20126400_20126600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064877	chr16	-	2330	7	ISM	ENSMUSG00000022822.17	ENSMUST00000079158.13	5811	30	63994	0	1606	0	3prime_fragment	FALSE	canonical	3	439	junction_6	35.3949933684915	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTGTTGTATAAAACAG	NA	False	NA	-3	True	AATAAA	-20	NA	20181150	20150052	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064878	chr16	-	5770	30	FSM	ENSMUSG00000022822.17	ENSMUST00000079158.13	5811	30	41	0	0	0	multi-exon	TRUE	canonical	3	160	junction_25	98.9917903368873	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTGTTGTATAAAACAG	NA	False	NA	-3	True	AATAAA	-20	NA	20245103	20150052	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211558_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555_20218790_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064899	chr16	+	208	1	Intergenic	novelGene_2041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTTGCTGGTTACTCCA	6059	False	NA	NA	False	NA	NA	NA	20158947	20159155	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_20158900_20159200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064903	chr16	+	189	1	Intergenic	novelGene_2042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACACAACTTAAGCTTTA	NA	False	NA	NA	False	NA	NA	NA	20165109	20165298	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_20165100_20165300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064909	chr16	+	197	1	Intergenic	novelGene_2043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	597	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCCTGATTTGATTCAA	NA	False	NA	NA	False	NA	NA	NA	20170940	20171137	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_20170900_20171100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064943	chr16	+	2482	16	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	74	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	764.3793124708	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317640	20328073	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324988_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064945	chr16	+	2482	16	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	74	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	764.311355985824	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317640	20328073	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324093_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064973	chr16	-	209	1	Intergenic	novelGene_2044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGGTGTTTCTGTAGC	5224	False	NA	NA	False	NA	NA	NA	20333454	20333245	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_20333200_20333500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000064987	chr16	+	2078	11	FSM	ENSMUSG00000022841.16	ENSMUST00000090023.13	2080	11	1	1	1	-1	multi-exon	FALSE	canonical	3	142	junction_4	799.773617969485	572	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTTTTGTTTGGGTCTT	1354	False	NA	16	True	NA	NA	NA	20354228	20362805	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359724_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065014	chr16	+	995	3	FSM	ENSMUSG00000115219.3	ENSMUST00000115522.10	1134	3	0	139	0	3	multi-exon	FALSE	canonical	3	220	junction_2	23	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTTCTAGGATTTTT	5899	False	NA	23	True	AATACA	-33	NA	20430342	20437622	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_20430571_20436375_20436660_20437139
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065023	chr16	+	288	1	Intergenic	novelGene_2045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTCATTCATTCATCTG	9278	False	NA	NA	False	NA	NA	NA	20433721	20434009	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_20433700_20434000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065036	chr16	+	2965	21	FSM	ENSMUSG00000006998.17	ENSMUST00000007212.9	2961	21	0	-4	0	4	multi-exon	FALSE	canonical	3	2673	junction_8	225.447882003801	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTATTTCCTGGGTGT	NA	False	NA	27	True	AATAAA	-20	NA	20470401	20482168	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065046	chr16	+	2914	21	NNC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	699.106780113024	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCTGTCTATTTCCTGG	NA	False	NA	23	True	AATAAA	-16	NA	20470450	20482164	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478855_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065052	chr16	+	313	1	Intergenic	novelGene_2046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACAGATGTTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20488170	20488483	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_20488200_20488500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065073	chr16	+	5421	32	NIC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	236	junction_1	347.040851712798	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491476	20511633	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065076	chr16	+	5483	33	NIC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	4	4	combination_of_known_junctions	FALSE	canonical	3	471	junction_14	285.078235903651	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTCTTTACTGACCTAT	NA	False	NA	21	True	ATTAAA	-21	NA	20491476	20511638	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065078	chr16	+	5418	32	FSM	ENSMUSG00000045983.17	ENSMUST00000073840.12	5394	32	-22	-2	4	0	multi-exon	FALSE	canonical	3	236	junction_1	320.871770382026	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491476	20511633	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065110	chr16	+	5453	33	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_20	346.449794286182	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491504	20511633	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502938_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065156	chr16	-	235	1	Intergenic	novelGene_2047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAAGGGTCTGGGAAGGAT	7325	False	NA	NA	False	NA	NA	NA	20582688	20582453	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_20582500_20582700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065159	chr16	-	178	1	Intergenic	novelGene_2048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAACAAGGTATAACT	NA	False	NA	NA	False	NA	NA	NA	20631625	20631447	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_20631400_20631600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065164	chr16	-	156	1	Intergenic	novelGene_2049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATAAATAAATAAACTTCCA	4966	False	NA	NA	False	NA	NA	NA	20729563	20729407	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_20729400_20729600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065171	chr16	+	192	1	Intergenic	novelGene_2050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGTATAAAAACTCACCAAA	3388	False	NA	NA	False	NA	NA	NA	20932277	20932469	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_20932300_20932500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065174	chr16	+	214	1	Intergenic	novelGene_2051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAAAAATAAGGAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	20982589	20982803	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_20982600_20982800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065186	chr16	+	4199	16	FSM	ENSMUSG00000005958.16	ENSMUST00000006112.7	4185	16	-9	-5	-9	4	multi-exon	FALSE	canonical	3	140	junction_8	11.1167541225945	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCTGCTCGTTCTTCCTC	NA	False	NA	16	True	AATAAA	-19	NA	21023495	21042059	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_21024014_21031639_21031705_21033074_21033748_21035945_21036102_21036764_21037116_21037244_21037370_21037543_21037704_21037788_21037898_21038204_21038258_21039169_21039293_21039396_21039645_21040034_21040251_21040376_21040527_21040614_21040809_21040898_21041055_21041157
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065227	chr16	+	221	1	Intergenic	novelGene_2052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGGAGAATAACCATG	NA	False	NA	NA	False	NA	NA	NA	21504507	21504728	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_21504500_21504700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065234	chr16	+	189	1	Intergenic	novelGene_2053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAATCGTTTTATTAATT	5208	False	NA	NA	False	NA	NA	NA	21532672	21532861	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_21532700_21532900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065241	chr16	+	184	1	Intergenic	novelGene_2054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGCCTGAAGTTTCACA	5575	False	NA	NA	False	NA	NA	NA	21533039	21533223	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_21533000_21533200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065243	chr16	-	2983	7	FSM	ENSMUSG00000022853.8	ENSMUST00000023559.7	2981	7	0	-2	0	2	multi-exon	FALSE	canonical	3	14	junction_3	3.35410196624968	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGTGTAAAAAACTGTT	NA	False	NA	NA	False	AATAAA	-21	NA	21606557	21580034	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_21582087_21584975_21585318_21589165_21589271_21592244_21592357_21594094_21594262_21596548_21596653_21606456
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065251	chr16	+	196	1	Intergenic	novelGene_2055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTAGCCTCCATGA	NA	False	NA	NA	False	NA	NA	NA	21604316	21604512	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_21604300_21604500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065259	chr16	-	1361	5	FSM	ENSMUSG00000022856.10	ENSMUST00000023562.9	1360	5	1	-2	1	2	multi-exon	FALSE	canonical	3	143	junction_1	14.1244468918255	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCAGGTTCTGAATGTGT	9191	False	NA	0	True	ATTAAA	-18	NA	21766301	21753073	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_21753796_21755730_21755870_21756682_21756845_21764750_21764905_21766117
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065292	chr16	+	4460	17	FSM	ENSMUSG00000022855.10	ENSMUST00000023561.8	4499	17	13	26	13	-26	multi-exon	FALSE	canonical	3	339	junction_11	50.6099900587819	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCTGGTGACATCTCTT	2215	False	NA	9	True	AGTAAA	-16	NA	21828246	21867993	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065311	chr16	-	3986	16	FSM	ENSMUSG00000033581.18	ENSMUST00000100052.11	3899	16	-87	0	-87	0	multi-exon	FALSE	canonical	3	902	junction_2	81.6059366032208	273	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTGTCTTGGTGTCTT	2186	False	NA	NA	False	AATATA	-16	NA	21982136	21877758	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065333	chr16	-	2160	9	FSM	ENSMUSG00000022858.17	ENSMUST00000161286.8	3403	9	61	1182	-18	717	multi-exon	TRUE	canonical	3	1235	junction_5	313.549014310363	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGTTTCTCTTTGGTGC	NA	False	NA	9	True	ATTAAA	-38	NA	22084694	22064480	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22084490
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065338	chr16	-	2427	10	FSM	ENSMUSG00000022858.17	ENSMUST00000162413.9	1687	10	-15	-725	-15	711	multi-exon	FALSE	canonical	3	442	junction_8	660.884723143114	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAATGAATGTTTCTCTT	NA	False	NA	3	True	ATTAAA	-32	NA	22084691	22064486	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22077735_22078012_22084490
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065352	chr16	-	2522	10	NIC	ENSMUSG00000022858.17	novel	1687	10	NA	NA	-3	697	combination_of_known_junctions	FALSE	canonical	3	119	junction_8	731.055553444622	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGCCAAGTAGAACTGGAA	NA	False	NA	-11	True	ATTAAA	-18	NA	22084679	22064500	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22077614_22078012_22084490
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065355	chr16	-	2398	10	NNC	ENSMUSG00000022858.17	novel	1687	10	NA	NA	-3	697	at_least_one_novel_splicesite	TRUE	canonical	3	309	junction_2	767.684686429121	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGCCAAGTAGAACTGGAA	NA	False	NA	-11	True	ATTAAA	-18	NA	22084679	22064500	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_-_22065617_22065939_22066011_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22077735_22078012_22084490
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065379	chr16	+	205	1	Intergenic	novelGene_2056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGCGGCACCACCGCCG	NA	False	NA	NA	False	NA	NA	NA	22070971	22071176	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_22071000_22071200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065381	chr16	+	808	1	Intergenic	novelGene_2057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCGTGGCGGGTGCGAGG	NA	False	NA	NA	False	NA	NA	NA	22083491	22084299	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_22083500_22084300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065410	chr16	-	2385	1	NIC	ENSMUSG00000013089.16	novel	3975	13	NA	NA	18136	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCAACCTGCCTCTTT	NA	False	NA	-13	True	AATAAA	-22	NA	22202443	22200058	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_-_22200100_22202400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065422	chr16	+	251	1	Intergenic	novelGene_2058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGAATGACAGGAGAAT	NA	False	NA	NA	False	NA	NA	NA	22577054	22577305	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_22577100_22577300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065431	chr16	-	2525	8	FSM	ENSMUSG00000004462.8	ENSMUST00000232075.2	2645	8	121	-1	-2	1	multi-exon	FALSE	canonical	3	49	junction_7	25.2214680179325	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTACTGTGCCAGAGT	NA	False	NA	NA	False	AATAAA	-16	NA	22676296	22631968	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676244
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065453	chr16	+	1999	10	FSM	ENSMUSG00000004460.18	ENSMUST00000004574.14	1927	10	1	-73	1	-4	multi-exon	FALSE	canonical	3	939	junction_3	70.1998909640038	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCAGGTGGCTTTGTCTTC	NA	False	NA	103	True	NA	NA	NA	22676595	22691211	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065460	chr16	+	1283	6	ISM	ENSMUSG00000022868.7	ENSMUST00000232556.2	1336	7	1828	0	-524	0	3prime_fragment	FALSE	canonical	3	93	junction_1	9.66643677887566	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCATGTTCCTTGTCT	NA	False	NA	22	True	NA	NA	NA	22712984	22718193	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr16_+_22713186_22713544_22713630_22713943_22714108_22715257_22715360_22716877_22716962_22717546
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065476	chr16	+	1688	8	FSM	ENSMUSG00000022871.14	ENSMUST00000231768.2	1572	8	-137	21	-137	0	multi-exon	TRUE	canonical	0	0	junction_2	190.973018716129	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCAACCTGTTGAC	NA	False	NA	14	True	AATAAA	-20	NA	22736946	22758507	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_22737345_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065500	chr16	+	198	1	Intergenic	novelGene_2059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACAAGTAAATCTAAAGGA	1036	False	NA	NA	False	NA	NA	NA	22880011	22880209	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_22880000_22880200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065507	chr16	+	178	1	Intergenic	novelGene_2060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAATGGGAAATTT	16	True	NA	NA	False	NA	NA	NA	22892815	22892993	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_22892800_22893000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065511	chr16	+	193	1	Intergenic	novelGene_2061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTAAATTCTTCTCTCC	3240	False	NA	NA	False	NA	NA	NA	22902657	22902850	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_22902700_22902800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065517	chr16	+	1896	11	FSM	ENSMUSG00000022884.17	ENSMUST00000023599.13	2208	11	312	0	2	0	multi-exon	FALSE	canonical	3	1278	junction_10	308.304135554488	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6051	False	NA	NA	False	AATAAA	-18	NA	22926505	22932697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065519	chr16	+	1759	10	FSM	ENSMUSG00000022884.17	ENSMUST00000131871.8	1737	10	-22	0	2	0	multi-exon	FALSE	canonical	3	441	junction_1	631.938131836603	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6051	False	NA	NA	False	AATAAA	-18	NA	22926505	22932697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_22926571_22927334_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065520	chr16	+	2712	11	FSM	ENSMUSG00000022884.17	ENSMUST00000077605.12	2708	11	-3	-1	2	0	multi-exon	FALSE	canonical	3	675	junction_10	433.482883168413	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6051	False	NA	NA	False	AATAAA	-18	NA	22926505	22932697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065528	chr16	+	1755	10	FSM	ENSMUSG00000022884.17	ENSMUST00000147117.8	1947	10	3	189	-1	0	multi-exon	FALSE	canonical	3	563	junction_3	486.088189935799	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6052	False	NA	NA	False	AATAAA	-18	NA	22926506	22932697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065529	chr16	+	2002	12	FSM	ENSMUSG00000022884.17	ENSMUST00000123413.8	1965	12	-20	-17	-1	0	multi-exon	FALSE	canonical	3	179	junction_11	605.093586095477	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6052	False	NA	NA	False	AATAAA	-18	NA	22926506	22932697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931208_22931916
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065530	chr16	+	3165	10	ISM	ENSMUSG00000022884.17	ENSMUST00000077605.12	2708	11	-2	-1	-1	0	intron_retention	FALSE	canonical	3	1315	junction_4	273.717210111296	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6052	False	NA	NA	False	AATAAA	-18	NA	22926506	22932697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065531	chr16	+	1898	11	NIC	ENSMUSG00000022884.17	novel	2208	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	441	junction_1	507.107927368524	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6052	False	NA	NA	False	AATAAA	-18	NA	22926506	22932697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065542	chr16	+	3104	8	NIC	ENSMUSG00000022884.17	novel	2208	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	563	junction_3	521.17203082503	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065543	chr16	+	1865	11	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_10	666.107979234598	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065544	chr16	+	2570	10	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	563	junction_3	575.550128674544	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065546	chr16	+	3027	9	ISM	ENSMUSG00000022884.17	ENSMUST00000131871.8	1737	10	-20	0	0	0	intron_retention	FALSE	canonical	3	441	junction_1	660.216063118734	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr16_+_22926571_22927334_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065548	chr16	+	3112	10	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	675	junction_9	448.081589792653	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22930014_22930252_22930343_22930566_22930647_22931100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065549	chr16	+	2573	10	NIC	ENSMUSG00000022884.17	novel	1737	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	441	junction_1	690.354516190552	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065551	chr16	+	1997	12	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	643.638109910317	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931204_22931916
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065552	chr16	+	2008	12	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_11	653.897178967119	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065553	chr16	+	2004	12	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	179	junction_11	686.556372698238	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931208_22931916
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065554	chr16	+	3167	10	NIC	ENSMUSG00000022884.17	novel	2208	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	441	junction_1	517.640158153648	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065558	chr16	+	2713	11	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	441	junction_1	579.353916013347	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065559	chr16	+	1863	11	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	179	junction_10	702.387962596171	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGGTCTGGCCATTTAT	6053	False	NA	NA	False	AATAAA	-20	NA	22926507	22932699	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931208_22931916
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065565	chr16	+	2005	12	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_11	564.272309855287	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065569	chr16	+	3024	9	ISM	ENSMUSG00000022884.17	ENSMUST00000147117.8	1947	10	4	189	0	0	intron_retention	FALSE	canonical	3	563	junction_3	488.360122629807	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065571	chr16	+	5423	2	FSM	ENSMUSG00000022884.17_ENSMUSG00000087935.3_ENSMUSG00000065208.3	ENSMUST00000134816.2	776	2	0	-4647	0	0	multi-exon	FALSE	canonical	3	1632	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_22926571_22927337
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065611	chr16	+	5199	3	NIC	ENSMUSG00000022884.17	novel	2208	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1632	junction_1	118.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_+_22926571_22927337_22930343_22930566
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065634	chr16	+	3244	9	NIC	ENSMUSG00000022884.17	novel	2208	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1315	junction_4	290.242463295776	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065683	chr16	+	6190	1	FSM	ENSMUSG00000087935.3	ENSMUST00000157310.3	178	1	-2998	-3014	-2998	3014	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_22926500_22932700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065697	chr16	+	1542	6	NNC	ENSMUSG00000022884.17	novel	1737	10	NA	NA	149	0	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_5	739.969891279368	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	-16	True	NA	NA	False	AATAAA	-18	NA	22929131	22932697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_+_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065708	chr16	-	1235	11	FSM	ENSMUSG00000022881.16	ENSMUST00000023598.15	1228	11	-3	-4	-3	4	multi-exon	FALSE	canonical	2	1237	junction_10	165.436271718145	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACAATTTTATTTAACAT	NA	False	NA	-22	True	AATAAA	-27	NA	22946490	22932688	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_22932858_22932936_22933054_22933194_22933276_22933356_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22943285_22943365_22946149_22946292_22946434
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065715	chr16	-	1274	12	NIC	ENSMUSG00000022881.16	novel	1228	11	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	2	35	junction_8	593.762439626105	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTGAATATACAATTTT	NA	False	NA	-31	True	AATAAA	-18	NA	22946467	22932697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_-_22932858_22932936_22933054_22933194_22933276_22933356_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22940979_22941051_22943285_22943365_22946149_22946292_22946434
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065719	chr16	-	1316	10	ISM	ENSMUSG00000022881.16	ENSMUST00000023598.15	1228	11	50	5	4	3	intron_retention	FALSE	canonical	2	1242	junction_3	141.821048778181	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTGAATATACAATTTT	NA	False	NA	-31	True	AATAAA	-18	NA	22946437	22932697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr16_-_22932858_22932936_22933054_22933194_22933276_22933356_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22943285_22943365_22946149
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065732	chr16	+	4340	8	FSM	ENSMUSG00000022885.17	ENSMUST00000023601.14	4506	8	166	0	166	0	multi-exon	FALSE	canonical	2	4	junction_2	3.46410161513775	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGCTTCTCTTTATAC	NA	False	NA	NA	False	AATAAA	-16	NA	23043655	23179098	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_23043980_23075708_23075852_23136313_23136449_23139782_23140429_23147091_23147190_23173615_23173715_23174958_23175134_23176378
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065737	chr16	+	199	1	Intergenic	novelGene_2062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTGCCTTGGCCATAGT	NA	False	NA	NA	False	NA	NA	NA	23093964	23094163	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_23094000_23094200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065744	chr16	+	1719	1	FSM	ENSMUSG00000116875.2	ENSMUST00000231737.2	969	1	-78	-672	-78	672	mono-exon	FALSE	NA	NA	NA	NA	NA	930	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTACCAACTAGCTAATAAA	NA	False	NA	NA	False	AATAAA	-40	NA	24348065	24349784	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_24348100_24349800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065754	chr16	+	217	1	Intergenic	novelGene_2063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATCAGTGGAGAACATATA	NA	False	NA	NA	False	AAGAAA	-20	NA	24587422	24587639	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_24587400_24587600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065760	chr16	+	203	1	Intergenic	novelGene_2064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAGAGCCTGGGACAACA	NA	False	NA	NA	False	NA	NA	NA	24650619	24650822	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_24650600_24650800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065775	chr16	+	6978	11	FSM	ENSMUSG00000038127.16	ENSMUST00000100026.10	7089	11	111	0	0	0	multi-exon	FALSE	canonical	3	85	junction_6	12.5415310070182	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGCCTACTGTTTTCAT	NA	False	NA	13	True	AATAAA	-22	NA	27207729	27270968	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_27207888_27224396_27224460_27225400_27225528_27228073_27228165_27235997_27236116_27254311_27254428_27255117_27255163_27255247_27255353_27257050_27257128_27263293_27263401_27264997
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065787	chr16	-	3101	2	FSM	ENSMUSG00000051065.10	ENSMUST00000100023.3	3055	2	-46	0	-46	0	multi-exon	FALSE	canonical	3	119	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTGTCATTATTACTT	4751	False	NA	0	True	AATAAA	-24	NA	28748471	28644927	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_28647762_28748204
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065797	chr16	-	180	1	Intergenic	novelGene_2065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAATCCTACTCCTT	NA	False	NA	NA	False	NA	NA	NA	28776285	28776105	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_28776100_28776300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065806	chr16	+	6026	30	NIC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	20	-295	combination_of_known_junctions	TRUE	canonical	3	253	junction_5	68.2954691456644	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGATTCTATTATTGGAG	NA	False	NA	6	True	ATTAAA	-17	NA	29398171	29473407	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065813	chr16	+	5903	29	FSM	ENSMUSG00000038084.17	ENSMUST00000160597.8	6230	29	30	297	-14	-297	multi-exon	FALSE	canonical	3	145	junction_5	76.2263931339013	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATGATTCTATTATTGG	NA	False	NA	4	True	ATTAAA	-15	NA	29398181	29473405	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065838	chr16	+	195	1	Intergenic	novelGene_2066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTCCAACTAAGAATTAC	NA	False	NA	NA	False	NA	NA	NA	29543373	29543568	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_29543400_29543600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065849	chr16	-	164	1	Intergenic	novelGene_2067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGTATAATGAAG	NA	False	NA	NA	False	NA	NA	NA	29563332	29563168	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_29563200_29563300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065854	chr16	+	170	1	Intergenic	novelGene_2068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGAAGCCGGGCA	NA	False	NA	NA	False	NA	NA	NA	29768233	29768403	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_29768200_29768400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065858	chr16	+	189	1	Intergenic	novelGene_2069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCCAGATAGGGGTTTAA	NA	False	NA	NA	False	NA	NA	NA	29800760	29800949	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_29800800_29800900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065870	chr16	+	1476	4	FSM	ENSMUSG00000022528.9	ENSMUST00000023171.8	1468	4	-1	-7	-1	7	multi-exon	FALSE	canonical	3	729	junction_2	50.3388517946129	374	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTGATTATTTCAAAATT	NA	False	NA	23	True	AATAAA	-24	NA	29884156	29886621	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_29884517_29884648_29884745_29884980_29885069_29885689
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065887	chr16	-	183	1	Intergenic	novelGene_2070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGTATCAACTGAAATGC	NA	False	NA	NA	False	NA	NA	NA	29971413	29971230	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_29971200_29971400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065896	chr16	+	183	1	Intergenic	novelGene_2071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAGAGAAGACAAAGAG	3332	False	NA	3	True	NA	NA	NA	30059049	30059232	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_30059000_30059200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065915	chr16	-	7617	34	FSM	ENSMUSG00000022533.15	ENSMUST00000100013.9	7310	34	-307	0	0	0	multi-exon	TRUE	canonical	3	161	junction_1	36.4499984569475	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAATATTTTTTCCTG	NA	False	NA	NA	False	AATAAA	-19	NA	30207655	30131240	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30162707_30162726_30163339_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065928	chr16	-	177	1	Intergenic	novelGene_2072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAGGTTTATTTA	NA	False	NA	NA	False	NA	NA	NA	30241247	30241070	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_30241100_30241200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065932	chr16	-	187	1	Intergenic	novelGene_2073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTGGAGAGTTTTAAAAGA	4301	False	NA	NA	False	NA	NA	NA	30263247	30263060	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_30263100_30263200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065935	chr16	+	186	1	Intergenic	novelGene_2074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATAAAATAGGGCTTGA	NA	False	NA	NA	False	NA	NA	NA	30285157	30285343	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_30285200_30285300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065940	chr16	+	201	1	Intergenic	novelGene_2075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATGGAAAAAGACAACACT	NA	False	NA	NA	False	NA	NA	NA	30289347	30289548	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_30289300_30289500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065955	chr16	+	204	1	Intergenic	novelGene_2076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTATGCCACGCCTATCT	NA	False	NA	NA	False	NA	NA	NA	30388818	30389022	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_30388800_30389000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065958	chr16	+	3073	1	FSM	ENSMUSG00000046546.4	ENSMUST00000059078.4	3075	1	0	2	0	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGAGAGCCTCTGGAAATG	NA	False	NA	90	True	AATAAA	-21	NA	30418540	30421613	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_30418500_30421600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065965	chr16	+	201	1	Intergenic	novelGene_2077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCACCTCACTCTCTCCT	NA	False	NA	NA	False	NA	NA	NA	30704688	30704889	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_30704700_30704900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065974	chr16	-	3482	4	FSM	ENSMUSG00000047434.15	ENSMUST00000055389.9	3470	4	-8	-4	-8	4	multi-exon	FALSE	canonical	3	135	junction_2	21.3124898175277	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTCTTCTGTTATTCAA	NA	False	NA	-1	True	ATTAAA	-16	NA	30900258	30773957	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_30776553_30826531_30826665_30869449_30869598_30899652
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000065986	chr16	-	6533	23	FSM	ENSMUSG00000049076.13	ENSMUST00000230614.2	3414	23	-112	-3007	-29	3	multi-exon	FALSE	canonical	3	119	junction_10	14.8474334816404	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTAAGTGCTCCAGCTCC	NA	False	NA	-17	True	AATAAA	-24	NA	31020092	30911226	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_30915265_30920642_30920705_30922316_30922428_30923662_30923773_30924302_30924491_30925867_30925961_30926844_30927006_30928458_30928551_30929318_30929389_30929710_30929920_30934819_30934926_30936075_30936177_30938213_30938266_30946138_30946252_30950077_30950153_30952346_30952443_30955354_30955400_30958288_30958473_30960556_30960616_30972523_30972578_30973390_30973511_30979148_30979207_31019756
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066000	chr16	+	216	1	Intergenic	novelGene_2078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTGGGGGAATCACCACA	NA	False	NA	NA	False	NA	NA	NA	31024834	31025050	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_31024800_31025000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066015	chr16	-	1180	5	FSM	ENSMUSG00000047714.15	ENSMUST00000115233.2	958	5	-294	72	-9	-72	multi-exon	FALSE	canonical	3	993	junction_1	34.2746261832277	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTTGTTTGCTTTTG	NA	False	NA	1	True	ATTAAA	-22	NA	31094104	31076864	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066022	chr16	-	917	6	FSM	ENSMUSG00000022548.15	ENSMUST00000130560.8	2074	6	230	927	16	3	multi-exon	FALSE	canonical	3	43	junction_5	47.7887015935775	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTTCCTGTGGATTC	8726	False	NA	-1	True	AATAAA	-15	NA	31133396	31115936	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_31116395_31119212_31119302_31122227_31122350_31129831_31129983_31133216_31133287_31133369
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066027	chr16	-	892	5	FSM	ENSMUSG00000022548.15	ENSMUST00000023207.15	979	5	124	-37	124	3	multi-exon	FALSE	canonical	3	104	junction_4	27.2614654778499	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTTCCTGTGGATTC	8834	False	NA	-1	True	AATAAA	-15	NA	31133288	31115936	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_31116395_31119212_31119302_31122227_31122350_31129831_31129983_31133216
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066032	chr16	+	194	1	Intergenic	novelGene_2079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGAAGGGGGCGGGGTT	NA	False	NA	NA	False	NA	NA	NA	31121649	31121843	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_31121600_31121800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066050	chr16	-	186	1	Intergenic	novelGene_2080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCCCTTCCCTACTCCTC	NA	False	NA	NA	False	NA	NA	NA	31262209	31262023	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_31262000_31262200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066057	chr16	-	185	1	Intergenic	novelGene_2081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAGAGACAGACAGAGA	8511	False	NA	NA	False	NA	NA	NA	31306084	31305899	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_31305900_31306100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066084	chr16	+	4798	26	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	71.9072291219735	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTAAATGTGTCTTGAA	NA	False	NA	20	True	AATAAA	-18	NA	31482722	31692168	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066095	chr16	+	4662	25	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	10	1	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	67.2157466463196	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTAAATGTGTCTTGAA	NA	False	NA	20	True	AATAAA	-18	NA	31482762	31692168	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066105	chr16	+	185	2	NNC	ENSMUSG00000022770.18	novel	470	4	NA	NA	-1796	-2268	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTGAGTTATTTTCGT	6486	False	NA	NA	False	NA	NA	NA	31670672	31674466	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_+_31670820_31674428
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066108	chr16	+	206	1	Genic_Genomic	ENSMUSG00000022770.18	novel	NA	NA	NA	NA	-1796	27	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTACAAATTCCTGTTTT	6486	False	NA	NA	False	AAAAAG	-6	NA	31670672	31670878	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr16_+_31670700_31670900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066118	chr16	-	170	1	Intergenic	novelGene_2082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATGAATTCAATTC	NA	False	NA	NA	False	NA	NA	NA	31762712	31762542	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_31762500_31762700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066129	chr16	+	2037	4	FSM	ENSMUSG00000022774.14	ENSMUST00000023460.7	2070	4	33	0	33	0	multi-exon	FALSE	canonical	3	415	junction_1	12.2565175405668	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGTCTATTTCCTCGC	NA	False	NA	4	True	AATAAA	-15	NA	31767363	31777290	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_31767546_31772942_31773125_31775108_31775248_31775756
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066138	chr16	-	6224	10	FSM	ENSMUSG00000022772.13	ENSMUST00000231360.2	6332	10	112	-4	3	4	multi-exon	FALSE	canonical	3	47	junction_4	8.64670064815276	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGTTGTGTTTAATAA	NA	False	NA	NA	False	AATAAA	-22	NA	31821993	31778485	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_31782356_31783087_31783139_31784562_31784647_31787617_31787756_31796497_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31807757_31809284_31821809
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066150	chr16	+	195	1	Intergenic	novelGene_2083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATTAGACATGAAGCTG	NA	False	NA	NA	False	NA	NA	NA	31811553	31811748	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_31811600_31811700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066164	chr16	+	190	1	Intergenic	novelGene_2084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTTGGGTAAGACTTCA	NA	False	NA	NA	False	NA	NA	NA	31824941	31825131	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_31824900_31825100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066170	chr16	+	239	1	Intergenic	novelGene_2085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	573	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACCCAGCATGATGGTGC	NA	False	NA	NA	False	NA	NA	NA	31828258	31828497	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_31828300_31828500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066188	chr16	-	212	1	Intergenic	novelGene_2086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTTGTTGTCCGTGTA	NA	False	NA	NA	False	AAGAAA	-9	NA	31881059	31880847	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_31880800_31881100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066198	chr16	-	1010	6	FSM	ENSMUSG00000023791.19	ENSMUST00000096109.11	993	6	-9	-8	-7	0	multi-exon	FALSE	canonical	3	398	junction_3	17.8258239641258	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTTTGTCTTCATT	NA	False	NA	0	True	AATAAA	-30	NA	31918565	31903233	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31915817_31915882_31918287
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066218	chr16	+	204	1	Intergenic	novelGene_2087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTTATGGGGGCTGGCG	1757	False	NA	NA	False	TTTAAA	-4	NA	31950389	31950593	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_31950400_31950600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066224	chr16	+	195	1	Intergenic	novelGene_2088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTTGCTTTCCCTTTG	1970	False	NA	6	True	NA	NA	NA	31950602	31950797	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_31950600_31950800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066238	chr16	-	4195	3	FSM	ENSMUSG00000035764.6	ENSMUST00000042732.6	4179	3	-16	0	-16	0	multi-exon	FALSE	canonical	3	188	junction_2	4	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGGTAGTCCATGTCA	7807	False	NA	2	True	ATTAAA	-17	NA	32065992	32048929	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_32052087_32057217_32057575_32065311
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066258	chr16	+	187	1	Intergenic	novelGene_2089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGAGCCAGCCCTGGTGG	NA	False	NA	NA	False	NA	NA	NA	32099728	32099915	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_32099700_32099900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066263	chr16	+	200	1	ISM	ENSMUSG00000014074.18	ENSMUST00000014218.15	3932	6	22311	935	22311	-935	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGTAAGTATCAACATCAA	3917	False	NA	NA	False	NA	NA	NA	32118589	32118789	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr16_+_32118600_32118800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066270	chr16	+	200	1	Intergenic	novelGene_2090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTTAAAAGATTTATTT	NA	False	NA	NA	False	NA	NA	NA	32140292	32140492	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_32140300_32140500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066278	chr16	-	182	1	Intergenic	novelGene_2091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGTTTTGTTTTTTG	7157	False	NA	NA	False	NA	NA	NA	32140855	32140673	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_32140700_32140900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066283	chr16	+	177	1	Intergenic	novelGene_2092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGGTTTTGTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	32141961	32142138	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_32142000_32142100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066286	chr16	+	200	1	Intergenic	novelGene_2093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCAGGAGTGGTGGCACA	3167	False	NA	NA	False	NA	NA	NA	32145989	32146189	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_32146000_32146200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066292	chr16	+	3388	11	FSM	ENSMUSG00000053774.10	ENSMUST00000115151.5	10313	11	-58	6983	-58	-1131	multi-exon	FALSE	canonical	3	131	junction_8	18.7480665669823	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAAGTTCTCTCTTTTGA	8194	False	NA	NA	False	NA	NA	NA	32151016	32205582	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_32151179_32171616_32171765_32178825_32178894_32186161_32186228_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200474_32200583_32200664_32203591
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066301	chr16	+	3257	10	FSM	ENSMUSG00000053774.10	ENSMUST00000232137.2	4384	10	-7	1134	4	-1134	multi-exon	FALSE	canonical	3	7	junction_3	51.2071561357021	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCAAAGTTCTCTCTTT	8256	False	NA	NA	False	NA	NA	NA	32151078	32205579	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_32151179_32171616_32171765_32178825_32178894_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200474_32200583_32200664_32203591
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066305	chr16	+	177	1	Intergenic	novelGene_2094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAATTATTATGGA	NA	False	NA	NA	False	NA	NA	NA	32197792	32197969	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_32197800_32198000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066311	chr16	+	813	5	FSM	ENSMUSG00000014075.16	ENSMUST00000014220.15	838	5	25	0	-19	0	multi-exon	FALSE	canonical	3	248	junction_3	20.9568008054665	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATGAATAGTTTTTATG	NA	False	NA	9	True	AATAAA	-21	NA	32238544	32247917	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_32238746_32241637_32241772_32244058_32244129_32245675_32245740_32247573
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066327	chr16	-	182	1	Intergenic	novelGene_2095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGAGGTTTGGAAT	NA	False	NA	1	True	NA	NA	NA	32279157	32278975	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_32279000_32279200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066346	chr16	+	4877	19	FSM	ENSMUSG00000022797.17	ENSMUST00000023486.15	4890	19	13	0	13	0	multi-exon	FALSE	canonical	3	399	junction_9	25.3592094942417	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCGGACTCATTTCATA	7970	False	NA	18	True	AATAAA	-19	NA	32427750	32451612	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066353	chr16	+	6062	17	NIC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	-23	0	intron_retention	FALSE	canonical	3	399	junction_7	25.2140059044571	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTGTCGGACTCATTT	7997	False	NA	14	True	AATAAA	-15	NA	32427777	32451608	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066360	chr16	+	4724	18	NIC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_5	103.076851767224	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTGTCGGACTCATTT	8016	False	NA	14	True	AATAAA	-15	NA	32427796	32451608	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066368	chr16	-	222	1	Intergenic	novelGene_2096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTACATGACTACCAACT	NA	False	NA	NA	False	AAAAAG	-23	NA	32441213	32440991	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_32441000_32441200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066389	chr16	-	181	1	Intergenic	novelGene_2097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAGGTTCCAGGTTTAAG	NA	False	NA	NA	False	NA	NA	NA	32593091	32592910	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_32592900_32593100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066399	chr16	+	3890	9	FSM	ENSMUSG00000022800.15	ENSMUST00000023489.11	4312	9	-27	449	-27	-449	multi-exon	FALSE	canonical	3	485	junction_4	65.3632876697615	232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGTAGTTTTGTGGTATT	NA	False	NA	6	True	AATAAA	-15	NA	32698123	32728796	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066416	chr16	+	5512	21	FSM	ENSMUSG00000022801.14	ENSMUST00000023491.13	5536	21	20	4	-2	-4	multi-exon	FALSE	canonical	3	40	junction_20	10.2853050513828	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCATGGTTTTCTTGCC	NA	False	NA	12	True	AATAAA	-21	NA	32734489	32836013	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_32734774_32770661_32770807_32772426_32772554_32775669_32775776_32779764_32779902_32782004_32782115_32794249_32794344_32796098_32796220_32799765_32799915_32802197_32802275_32806345_32806398_32807108_32807259_32808800_32808852_32810634_32810689_32814131_32814204_32815317_32815367_32816175_32816284_32817751_32817859_32818873_32819012_32826033_32826112_32832710
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066429	chr16	+	193	1	Intergenic	novelGene_2098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCACTTGTCATCTGAC	NA	False	NA	NA	False	NA	NA	NA	32845719	32845912	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_32845700_32845900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066442	chr16	+	481	5	FSM	ENSMUSG00000060636.15	ENSMUST00000078804.12	491	5	-3	13	-3	0	multi-exon	FALSE	canonical	3	3858	junction_1	2402.68870226669	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTCCTAAATTGAGTT	NA	False	NA	21	True	AATAAA	-36	NA	32876819	32880546	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_32876881_32877505_32877549_32877759_32877913_32879048_32879194_32880467
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066457	chr16	+	522	5	FSM	ENSMUSG00000060636.15	ENSMUST00000115078.8	500	5	-22	0	6	0	multi-exon	FALSE	canonical	3	927	junction_1	3609.33805392346	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCACATCTGTCC	NA	False	NA	10	True	AATAAA	-25	NA	32876874	32880535	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_32876988_32877505_32877549_32877759_32877913_32879048_32879194_32880467
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066467	chr16	-	193	1	Intergenic	novelGene_2099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAAATCTCTACAAGTG	NA	False	NA	NA	False	NA	NA	NA	32967972	32967779	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_32967800_32968000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066473	chr16	+	4540	13	FSM	ENSMUSG00000022807.10	ENSMUST00000039733.10	4521	13	-19	0	-19	0	multi-exon	FALSE	canonical	3	140	junction_5	9.04118662320138	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGGCGTCTCTTTCATA	NA	False	NA	5	True	AATAAA	-15	NA	33005421	33063682	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_33006371_33016443_33016513_33025041_33025218_33026292_33026373_33030295_33030473_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066496	chr16	+	203	1	Intergenic	novelGene_2100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGCCTCAGAATCCTAGA	6905	False	NA	NA	False	NA	NA	NA	33192067	33192270	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_33192100_33192300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066501	chr16	+	226	1	Intergenic	novelGene_2101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTATCTAGCATTTTTAAA	NA	False	NA	NA	False	ATTAAA	-9	NA	33197248	33197474	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_33197200_33197500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066521	chr16	+	2610	14	FSM	ENSMUSG00000035506.17	ENSMUST00000121925.8	2656	14	46	0	46	0	multi-exon	FALSE	canonical	3	33	junction_5	11.5650974613248	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTATTTTTTATTATT	NA	False	NA	9	True	AATAAA	-19	NA	33337743	33483778	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_33337866_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33410621_33410736_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066527	chr16	-	342	1	Intergenic	novelGene_2102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAATTGAGATAGTCTCC	NA	False	NA	NA	False	AAAAAG	-12	NA	33618349	33618007	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_33618000_33618300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066532	chr16	+	197	1	Intergenic	novelGene_2103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGATGTCAGAAATCAAGG	NA	False	NA	NA	False	NA	NA	NA	33632932	33633129	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_33632900_33633100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066541	chr16	+	186	1	Intergenic	novelGene_2104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATTTGAATATTGAAAAG	NA	False	NA	NA	False	NA	NA	NA	33638222	33638408	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_33638200_33638400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066553	chr16	-	3485	6	FSM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	0	-1	0	1	multi-exon	FALSE	canonical	3	1087	junction_1	75.962095811003	220	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTAGTCTCCTGCCTCTG	8640	False	NA	NA	False	NA	NA	NA	33787408	33775150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33784141_33784296_33787195
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066570	chr16	+	189	1	Intergenic	novelGene_2105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTCCACTCTTGATTTC	3167	False	NA	NA	False	NA	NA	NA	33802667	33802856	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_33802700_33802900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066583	chr16	+	4021	13	FSM	ENSMUSG00000022833.8	ENSMUST00000231609.2	3999	13	-28	6	-6	2	multi-exon	FALSE	canonical	3	110	junction_6	18.9487613198213	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTGAATTTGTTTACTTA	NA	False	NA	9	True	AATATA	-18	NA	34511073	34545566	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066597	chr16	+	235	1	Intergenic	novelGene_2106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATCAAGCTGAGCACAAA	672	False	NA	NA	False	NA	NA	NA	34650624	34650859	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_34650600_34650900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066615	chr16	-	182	1	Intergenic	novelGene_2107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTCATTATCTCAAAAG	NA	False	NA	NA	False	NA	NA	NA	34963941	34963759	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_34963800_34963900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066620	chr16	-	1654	7	FSM	ENSMUSG00000034473.15	ENSMUST00000043521.5	3992	7	61	2277	-5	656	multi-exon	FALSE	canonical	3	72	junction_4	6.0736223860962	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTCTTCCAAATTCTTA	NA	False	NA	-20	True	AATACA	-17	NA	35184227	35133777	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_35134658_35139173_35139240_35149867_35149984_35167968_35168164_35169200_35169365_35181930_35182130_35184193
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066626	chr16	-	1860	17	FSM	ENSMUSG00000022844.9	ENSMUST00000023550.9	1809	17	-41	-10	-41	10	multi-exon	FALSE	canonical	3	428	junction_7	56.9566378374812	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATGTTTTCACGAGCCC	NA	False	NA	0	True	AATAAA	-24	NA	35311284	35217671	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230825_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311098
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066638	chr16	-	1735	17	NNC	ENSMUSG00000022844.9	novel	1809	17	NA	NA	-13	4	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_16	132.890697567587	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTAGAGTATGTTTTCAC	NA	False	NA	-6	True	AATAAA	-18	NA	35311256	35217677	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230825_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311189
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066658	chr16	+	1626	8	FSM	ENSMUSG00000022849.6	ENSMUST00000231579.2	1703	8	-17	94	-17	-94	multi-exon	TRUE	canonical	3	531	junction_3	35.6118531058502	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACGTGTATATTTGCTTT	5387	False	NA	13	True	AATATA	-19	NA	35590727	35645824	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634425_35637521_35637694_35639048_35639133_35645058_35645170_35645252
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066674	chr16	+	178	1	Intergenic	novelGene_2108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAAAGGCTGTGTGTGT	8077	False	NA	NA	False	NA	NA	NA	35593417	35593595	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_35593400_35593600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066678	chr16	-	180	1	Intergenic	novelGene_2109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAACATAGAGCTAAA	NA	False	NA	NA	False	NA	NA	NA	35666786	35666606	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_35666600_35666800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066682	chr16	+	209	1	Intergenic	novelGene_2110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGCAGGTACAGAC	NA	False	NA	NA	False	NA	NA	NA	35676576	35676785	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_35676600_35676800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066691	chr16	+	163	1	Intergenic	novelGene_2111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATATAGAGAAATATCCTA	NA	False	NA	NA	False	NA	NA	NA	35796578	35796741	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_35796600_35796700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066704	chr16	-	177	1	Intergenic	novelGene_2112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGTTTGGCGGTTAAGAG	NA	False	NA	NA	False	NA	NA	NA	35819089	35818912	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_35818900_35819100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066709	chr16	-	184	1	Intergenic	novelGene_2113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATACATTACAGGTAAAC	NA	False	NA	-2	True	NA	NA	NA	35819393	35819209	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_35819200_35819400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066719	chr16	-	706	5	FSM	ENSMUSG00000003955.9	ENSMUST00000004057.9	718	5	-70	82	9	3	multi-exon	FALSE	canonical	3	971	junction_1	40.7982842776507	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTTTGTTTTGTTGCT	NA	False	NA	-2	True	AATACA	-17	NA	35891955	35864212	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_35864462_35866748_35866858_35870211_35870321_35872655_35872779_35891839
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066733	chr16	+	180	1	Intergenic	novelGene_2114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGCTGGTGAGATGGCTC	4518	False	NA	NA	False	NA	NA	NA	35876141	35876321	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_35876100_35876300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066735	chr16	+	1131	5	FSM	ENSMUSG00000075229.12	ENSMUST00000164916.9	1073	5	-58	0	-58	0	multi-exon	FALSE	canonical	3	859	junction_1	27.9284800875379	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTATTTGGTGACTTT	NA	False	NA	25	True	ATTAAA	-22	NA	35891996	35912490	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_35892508_35903060_35903187_35905386_35905534_35910270_35910331_35912203
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066747	chr16	-	188	1	Intergenic	novelGene_2115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCTATTGTTCTATCCA	6869	False	NA	NA	False	NA	NA	NA	35925903	35925715	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_35925700_35925900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066778	chr16	+	1616	13	NIC	ENSMUSG00000022837.15	novel	2797	14	NA	NA	10	-1	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	67.3747294366862	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCAAGTCTGAAAGCAT	NA	False	NA	14	True	NA	NA	NA	36648756	36679933	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_+_36648802_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36679723
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066781	chr16	+	1671	13	NIC	ENSMUSG00000022837.15	novel	2257	15	NA	NA	10	1	combination_of_known_junctions	FALSE	canonical	3	130	junction_12	42.1751473685102	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAAGTCTGAAAGCATGT	NA	False	NA	16	True	NA	NA	NA	36648756	36679935	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_+_36648855_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36679723
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066782	chr16	+	2276	15	FSM	ENSMUSG00000022837.15	ENSMUST00000023535.4	2257	15	-13	-6	10	-2	multi-exon	FALSE	canonical	3	136	junction_14	52.2779073016196	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCATGTTATTTCAATG	NA	False	NA	50	True	AATAAA	-17	NA	36648756	36693081	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_36648855_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36687920_36688053_36691812_36691970_36692553
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066787	chr16	+	2219	15	NIC	ENSMUSG00000022837.15	novel	2257	15	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	69.4050518657669	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCATGTTATTTCAATG	NA	False	NA	50	True	AATAAA	-17	NA	36648760	36693081	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_+_36648802_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36687920_36688053_36691812_36691970_36692553
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066806	chr16	+	187	1	ISM	ENSMUSG00000022837.15	ENSMUST00000129123.2	546	4	8133	1	7792	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCAAGTCTGAAAGCAT	NA	False	NA	14	True	NA	NA	NA	36679746	36679933	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr16_+_36679700_36679900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066816	chr16	-	3099	5	FSM	ENSMUSG00000022828.11	ENSMUST00000023525.9	3084	5	-15	0	-15	0	multi-exon	FALSE	canonical	3	285	junction_4	13.7204227340122	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTGGTTATACTCACTAA	NA	False	NA	NA	False	AATAAA	-36	NA	37360166	37330151	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_37332182_37336080_37336323_37343112_37343315_37356082_37356556_37360014
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066827	chr16	+	2026	8	FSM	ENSMUSG00000022827.15	ENSMUST00000023524.13	2031	8	5	0	5	0	multi-exon	FALSE	canonical	3	98	junction_4	11.0896163971859	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGTCATTTCTTTTAA	NA	False	NA	NA	False	ATTAAA	-20	NA	37360251	37392747	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_37360323_37362208_37362301_37377182_37377313_37380356_37380472_37383977_37384129_37387681_37387754_37390749_37390789_37391391
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066847	chr16	+	3675	11	FSM	ENSMUSG00000022816.12	ENSMUST00000114763.3	3789	11	125	-11	-57	11	multi-exon	FALSE	canonical	3	116	junction_9	10.1607086367044	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTTTCCTTATTGCCAA	5276	False	NA	NA	False	NA	NA	NA	37597359	37656887	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_37597515_37597655_37597713_37636067_37636173_37639265_37639396_37641517_37641551_37642962_37643094_37647087_37647207_37649068_37649182_37649475_37649587_37651918_37651996_37654243
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066866	chr16	+	2703	1	ISM	ENSMUSG00000034158.10	ENSMUST00000078717.7	8604	4	17766	1	17766	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTCTTGGTCCGGTCA	NA	False	NA	21	True	AATAAA	-21	NA	37706516	37709219	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr16_+_37706500_37709200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066885	chr16	-	204	1	Intergenic	novelGene_2116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATAATAGCGAGATTATT	NA	False	NA	NA	False	NA	NA	NA	38163572	38163368	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_38163400_38163600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066893	chr16	+	434	3	FSM	ENSMUSG00000046516.11	ENSMUST00000050273.9	444	3	8	2	3	-2	multi-exon	FALSE	canonical	3	2901	junction_2	455	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTCTTTGTTGTGTTTCTT	NA	False	NA	26	True	ATTAAA	-28	NA	38167360	38173123	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_38167570_38169602_38169692_38172987
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066901	chr16	-	917	5	ISM	ENSMUSG00000002847.8	ENSMUST00000002926.8	1974	11	25420	0	10069	0	3prime_fragment	FALSE	canonical	3	158	junction_2	28.8823042709546	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTTGGTTGTTTTGTTG	NA	False	NA	-3	True	AATAAA	-20	NA	38228087	38216478	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr16_-_38216898_38217700_38217866_38221237_38221347_38225898_38225989_38227953
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066942	chr16	-	3010	11	FSM	ENSMUSG00000034064.15	ENSMUST00000153187.8	2922	11	-8	-80	-8	77	multi-exon	FALSE	canonical	3	209	junction_10	237.918389369128	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGTACTTGGTGAGCCT	6258	False	NA	-1	True	AATATA	-24	NA	38370592	38345421	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370444
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066956	chr16	-	3341	10	ISM	ENSMUSG00000034064.15	ENSMUST00000153187.8	2922	11	30	-3	30	0	intron_retention	FALSE	canonical	3	921	junction_4	40.8985495833861	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGGCTCCTCATTTACT	6296	False	NA	-1	True	NA	NA	NA	38370554	38345498	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066975	chr16	+	2664	9	FSM	ENSMUSG00000002845.15	ENSMUST00000163884.8	1645	9	-46	-973	-46	1	multi-exon	FALSE	canonical	1	310	junction_8	142.984210229661	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCTATTTGTGAGCATT	7024	False	NA	5	True	AATAAA	-16	NA	38379013	38412525	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066980	chr16	+	1641	9	NIC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	-6	38	combination_of_known_junctions	FALSE	canonical	1	87	junction_5	232.101136360855	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	7064	False	NA	23	True	AGTAAA	-14	NA	38379053	38411746	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405741_38405881_38406582_38406771_38408544_38408666_38411273
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000066997	chr16	+	1970	9	NNC	ENSMUSG00000002845.15	novel	2871	9	NA	NA	-9	38	at_least_one_novel_splicesite	FALSE	canonical	1	18	junction_1	251.54817505798	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	NA	False	NA	23	True	AGTAAA	-14	NA	38383213	38411746	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_+_38383410_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067009	chr16	+	210	1	Intergenic	novelGene_2117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACTTTATATTTTCAAG	NA	False	NA	NA	False	NA	NA	NA	39497066	39497276	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_39497100_39497300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067019	chr16	-	142	1	Intergenic	novelGene_2118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAGTCAGTCTCAGAC	NA	False	NA	NA	False	AATAAA	-14	NA	42847621	42847479	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_42847500_42847600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067025	chr16	-	6978	1	Intergenic	novelGene_2119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	43591546	43584568	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_43584600_43591500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067028	chr16	-	3066	9	NIC	ENSMUSG00000022704.17	novel	3856	9	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	1	31	junction_3	44.3163344603319	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCTGTGCATTGTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	43710038	43681769	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691983_43692184_43696991_43697205_43698319_43698397_43700661_43700718_43701330_43701577_43709929
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067032	chr16	-	3047	9	NIC	ENSMUSG00000022704.17	novel	3856	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	31	junction_3	35.9374456521328	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCTGTGCATTGTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	43710044	43681769	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691983_43692184_43696991_43697205_43698319_43698397_43700661_43700718_43701355_43701577_43709929
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067046	chr16	-	183	1	Intergenic	novelGene_2120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATTGTTCTTAGAGTTG	NA	False	NA	NA	False	NA	NA	NA	43705239	43705056	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_43705100_43705200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067055	chr16	+	3041	16	FSM	ENSMUSG00000022701.19	ENSMUST00000178400.9	3745	16	87	617	-12	-617	multi-exon	FALSE	canonical	1	27	junction_10	16.0949957716331	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTGCCTGGACTTACG	NA	False	NA	16	True	AATAAA	-16	NA	43710249	43784060	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_43710402_43718452_43718595_43725708_43725847_43727150_43727330_43728774_43728999_43735812_43735967_43751556_43751748_43759276_43759527_43763866_43764328_43765001_43765094_43767031_43767115_43767789_43767892_43777180_43777325_43779578_43779732_43780380_43780527_43783630
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067067	chr16	+	178	1	Intergenic	novelGene_2121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAACGTACAATAAAA	NA	False	NA	NA	False	NA	NA	NA	43884033	43884211	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_43884000_43884200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067083	chr16	-	3977	15	NNC	ENSMUSG00000052459.14	novel	4234	15	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_14	112.129662554071	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTTTCCCTTTTTATT	NA	False	NA	0	True	AATAAA	-18	NA	43959406	43905764	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959319
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067131	chr16	+	188	1	Intergenic	novelGene_2122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTAAAACTTACATAAGCT	NA	False	NA	NA	False	AATAAA	-38	NA	44048461	44048649	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_44048500_44048600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067150	chr16	+	190	1	Intergenic	novelGene_2123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGCTTTGAACACTAGA	NA	False	NA	NA	False	NA	NA	NA	44503936	44504126	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_44503900_44504100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067151	chr16	+	5399	9	FSM	ENSMUSG00000036208.14	ENSMUST00000048788.14	2866	9	-19	-2514	-19	2514	multi-exon	FALSE	canonical	3	32	junction_1	9.69455388349562	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGTTTTTATCTCTGCC	NA	False	NA	NA	False	AATAAA	-28	NA	44544644	44560161	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_44544832_44547390_44547546_44549604_44549685_44549944_44550077_44550482_44550561_44551694_44552060_44552420_44552483_44554903_44555161_44556078
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067160	chr16	-	3402	6	FSM	ENSMUSG00000022668.11	ENSMUST00000162512.8	3415	6	15	-2	11	2	multi-exon	FALSE	canonical	3	89	junction_4	12.4739729036101	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGTCATGGTGTTT	NA	False	NA	NA	False	NA	NA	NA	44566711	44557128	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565757_44565857_44566361
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067171	chr16	-	2959	7	FSM	ENSMUSG00000022664.12	ENSMUST00000023344.10	4233	7	36	1238	-15	1135	multi-exon	FALSE	canonical	3	47	junction_3	4.7404875511093	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAATCTGTACTATGTC	NA	False	NA	-11	True	ATTAAA	-19	NA	44979033	44961173	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_44962576_44963983_44964765_44967630_44967699_44971815_44971950_44972939_44973039_44977823_44978010_44978744
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067182	chr16	+	1471	12	FSM	ENSMUSG00000022663.4	ENSMUST00000023343.4	2057	12	-31	617	-31	27	multi-exon	FALSE	canonical	3	353	junction_3	33.1011472673263	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAGATGTTTTCATTTC	NA	False	NA	14	True	AATAAA	-44	NA	44979116	45008284	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_44979535_44982768_44982811_44987342_44987393_44990228_44990300_44992008_44992117_44995611_44995662_44998592_44998675_45003018_45003054_45003183_45003340_45004044_45004173_45006528_45006598_45008022
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067189	chr16	-	190	1	Intergenic	novelGene_2124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCATCTTTAACATGTCA	NA	False	NA	NA	False	NA	NA	NA	45081446	45081256	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_45081300_45081400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067204	chr16	-	2625	4	NIC	ENSMUSG00000033157.18	novel	2848	5	NA	NA	-6	3	combination_of_known_junctions	FALSE	canonical	3	92	junction_3	111.547697819762	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGAGTCCTGTGCATT	NA	False	NA	-2	True	NA	NA	NA	45563276	45550084	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_-_45552323_45557255_45557394_45557886_45557999_45563139
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067226	chr16	+	197	1	Intergenic	novelGene_2125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGCTTCCTATGTAAAT	NA	False	NA	NA	False	NA	NA	NA	45750374	45750571	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_45750400_45750600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067232	chr16	-	7556	6	FSM	ENSMUSG00000022656.16	ENSMUST00000023334.15	3062	6	-46	-4448	-46	4448	multi-exon	FALSE	canonical	3	205	junction_1	19.3328735577513	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTTTTAGACTTTTT	NA	False	NA	-4	True	TTTAAA	-29	NA	46317376	46263083	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_46269332_46274986_46275139_46278476_46278595_46279177_46279475_46284180_46284523_46316977
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067270	chr16	-	236	1	Intergenic	novelGene_2126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTATTTATTCAATTTC	NA	False	NA	NA	False	AAGAAA	-44	NA	48128227	48127991	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_48128000_48128200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067280	chr16	+	1790	7	FSM	ENSMUSG00000072419.6	ENSMUST00000097175.5	1948	7	-4	162	-4	-162	multi-exon	FALSE	canonical	3	478	junction_4	51.0968579160098	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGTCTTGAGTATTTTA	NA	False	NA	66	True	NA	NA	NA	48130835	48139924	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067290	chr16	+	222	1	Intergenic	novelGene_2127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGCTTCAGTAAGCATGA	NA	False	NA	NA	False	NA	NA	NA	48201531	48201753	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_48201500_48201800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067296	chr16	+	3030	27	FSM	ENSMUSG00000022652.8	ENSMUST00000023330.8	3045	27	28	-13	28	13	multi-exon	FALSE	canonical	0	0	junction_19	334.347850609362	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTTGATTGCTATTG	NA	False	NA	24	True	AATAAA	-29	NA	48251627	48451276	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067335	chr16	+	890	8	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17028	13	at_least_one_novel_splicesite	FALSE	canonical	3	194	junction_1	345.998525418587	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTTGATTGCTATTG	723	False	NA	24	True	AATAAA	-29	NA	48432057	48451276	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_+_48432112_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067338	chr16	+	1000	8	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17028	13	at_least_one_novel_splicesite	FALSE	canonical	3	485	junction_1	244.404064898224	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTTGATTGCTATTG	723	False	NA	24	True	AATAAA	-29	NA	48432057	48451276	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_+_48432222_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067346	chr16	-	4979	31	FSM	ENSMUSG00000064061.14	ENSMUST00000114516.8	3331	31	-1	-1647	-1	0	multi-exon	FALSE	canonical	3	44	junction_18	21.5464614264152	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATTTCTTTATGTATT	4420	False	NA	-7	True	AATAAA	-18	NA	48814305	48744594	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067349	chr16	-	5597	32	FSM	ENSMUSG00000064061.14	ENSMUST00000121869.8	5820	32	223	0	-1	0	multi-exon	FALSE	canonical	3	63	junction_19	19.7691147506127	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATTTCTTTATGTATT	4420	False	NA	-7	True	AATAAA	-18	NA	48814305	48744594	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067358	chr16	-	6840	32	NIC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	21.2442316342938	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATTTCTTTATGTATT	4420	False	NA	-7	True	AATAAA	-18	NA	48814305	48744594	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_-_48747709_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067362	chr16	-	6222	31	NIC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_18	22.9540846038347	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATTTCTTTATGTATT	4420	False	NA	-7	True	AATAAA	-18	NA	48814305	48744594	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_-_48747709_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067389	chr16	+	175	1	Intergenic	novelGene_2128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAGAGAGAGAGAAAG	NA	False	NA	NA	False	NA	NA	NA	50809938	50810113	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_50809900_50810100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067392	chr16	+	194	1	Intergenic	novelGene_2129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAAGTTGATTATCCTA	NA	False	NA	NA	False	NA	NA	NA	51204300	51204494	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_51204300_51204500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067433	chr16	+	649	6	FSM	ENSMUSG00000098274.8	ENSMUST00000023269.5	677	6	28	0	28	0	multi-exon	FALSE	canonical	3	9815	junction_1	1495.09793659145	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTGCTGATTGATTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	55786665	55791798	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_55786802_55786909_55786986_55787422_55787534_55789872_55790010_55790474_55790539_55791673
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067439	chr16	+	632	5	FSM	ENSMUSG00000098274.8	ENSMUST00000137811.8	639	5	7	0	7	0	multi-exon	FALSE	canonical	3	12575	junction_2	609.402371180159	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTGCTGATTGATTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	55786790	55791798	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_55786986_55787422_55787534_55789872_55790010_55790474_55790539_55791673
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067444	chr16	+	5011	11	FSM	ENSMUSG00000022601.12	ENSMUST00000050248.9	4920	11	-91	0	-91	0	multi-exon	FALSE	canonical	3	98	junction_1	21.3485362495886	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGCGTTGAGCTTGAC	NA	False	NA	6	True	AATAAA	-27	NA	55794154	55829276	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_55794735_55800957_55801194_55802537_55802770_55810621_55811458_55811804_55811982_55818368_55818615_55820941_55821087_55823071_55823190_55826272_55826432_55826537_55826714_55827170
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067460	chr16	-	2210	5	FSM	ENSMUSG00000071533.12	ENSMUST00000125040.8	2200	5	-10	0	0	0	multi-exon	FALSE	canonical	3	494	junction_4	790.763357459107	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTCTTATTTTCTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	55850069	55835868	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844750_55849965
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067461	chr16	-	2461	5	FSM	ENSMUSG00000071533.12	ENSMUST00000130818.8	938	5	-30	-1493	0	0	multi-exon	FALSE	canonical	3	279	junction_4	876.141113063415	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTCTTATTTTCTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	55850069	55835868	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55845001_55849965
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067467	chr16	-	2259	5	NNC	ENSMUSG00000071533.12	novel	2295	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_3	822.958800609119	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTCTTATTTTCTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	55850069	55835868	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_-_55837681_55838834_55838891_55842417_55842490_55844586_55844802_55849965
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067489	chr16	-	2367	6	NNC	ENSMUSG00000071533.12	novel	2200	5	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_4	1006.61305375998	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTCTTATTTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	55850051	55835869	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844750_55844824_55845001_55849965
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067490	chr16	-	2181	5	NNC	ENSMUSG00000071533.12	novel	2200	5	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_3	881.437285063436	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTCTTATTTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	55850044	55835869	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_-_55837681_55838834_55838891_55842417_55842490_55844586_55844750_55849965
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067514	chr16	-	1880	2	FSM	ENSMUSG00000044763.9	ENSMUST00000059052.9	3002	2	18	1104	18	-1104	multi-exon	FALSE	canonical	3	404	junction_1	0	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTGAATATCAGACTTTA	7404	False	NA	2	True	AATAAA	-28	NA	55858164	55854075	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_55855655_55857863
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067525	chr16	+	200	1	Intergenic	novelGene_2130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACTTTGAGAGTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	55897826	55898026	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_55897800_55898000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067535	chr16	-	414	2	Antisense	novelGene_ENSMUSG00000052917.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	133	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTAGAGCTGGGAGGTGG	4072	False	NA	-6	True	NA	NA	NA	55936661	55933918	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr16_-_55934262_55936590
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067541	chr16	-	1779	8	NNC	ENSMUSG00000022757.20	novel	1945	8	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_2	169.645368402465	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTTGTTGCCTAAT	NA	False	NA	0	True	AATAAA	-16	NA	56537659	56510694	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_-_56511517_56514762_56514853_56517833_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067545	chr16	-	1947	8	FSM	ENSMUSG00000022757.20	ENSMUST00000065515.14	1945	8	-2	0	-2	0	multi-exon	FALSE	canonical	3	474	junction_2	54.3950027716757	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTTGTTGCCTAAT	NA	False	NA	0	True	AATAAA	-16	NA	56537815	56510694	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_56511517_56514762_56514853_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067569	chr16	-	1323	10	FSM	ENSMUSG00000022751.10	ENSMUST00000023432.10	1286	10	-37	0	-28	0	multi-exon	TRUE	canonical	3	674	junction_8	39.9499687108764	216	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGATGTTTTTCTTCT	NA	False	NA	NA	False	ATTAAA	-19	NA	56987732	56977027	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_56977530_56977846_56977903_56979780_56979880_56980429_56980509_56981492_56981568_56982053_56982148_56983880_56983970_56984560_56984682_56986460_56986580_56987643
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067578	chr16	-	3675	18	FSM	ENSMUSG00000022749.9	ENSMUST00000023431.8	3690	18	19	-4	19	4	multi-exon	TRUE	canonical	3	134	junction_12	18.4520326427881	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTGGAGGATGTCTGTT	NA	False	NA	0	True	AATAAA	-26	NA	57051848	56989220	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028566_57028691_57032733_57032939_57034526_57034633_57038671_57038784_57051676
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067582	chr16	-	3494	18	NIC	ENSMUSG00000022749.9	novel	3690	18	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_15	37.195732165794	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCCCTGGAGGATGTC	NA	False	NA	-4	True	AATAAA	-22	NA	57051756	56989224	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028566_57028691_57032733_57032854_57034526_57034633_57038671_57038784_57051676
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067597	chr16	-	977	9	ISM	ENSMUSG00000022748.9	ENSMUST00000114371.5	1150	10	283300	-5	283230	5	3prime_fragment	TRUE	canonical	3	200	junction_5	23.459739448681	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTCTTTCCCCTCTGCT	NA	False	NA	-4	True	AATAAA	-37	NA	57143909	57122357	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr16_-_57122646_57124042_57124132_57127188_57127277_57127731_57127793_57131615_57131719_57133020_57133081_57136524_57136655_57138268_57138344_57143826
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067607	chr16	-	306	1	Intergenic	novelGene_2131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTAATCGAACCATCTAGT	NA	False	NA	NA	False	NA	NA	NA	57212039	57211733	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_57211700_57212000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067631	chr16	+	3098	7	FSM	ENSMUSG00000022742.7	ENSMUST00000060077.7	3097	7	4	-5	4	5	multi-exon	FALSE	canonical	3	129	junction_2	26.4916129285394	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGTTTCCTTTATTGT	NA	False	NA	NA	False	AATAAA	-22	NA	58490658	58500754	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_58491314_58492890_58493035_58493698_58493810_58494742_58494885_58495604_58495824_58498307_58498413_58499032
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067641	chr16	+	2110	5	FSM	ENSMUSG00000022744.13	ENSMUST00000023426.12	2147	5	26	11	11	-11	multi-exon	FALSE	canonical	3	351	junction_1	33.101170674162	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTCTAAATTGTTTGAG	NA	False	NA	13	True	AATAAA	-20	NA	58548298	58554603	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_58548448_58549800_58550111_58551664_58551776_58552943_58553082_58553201
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067650	chr16	+	218	1	Intergenic	novelGene_2132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTGCAATACCACCAGCAA	NA	False	NA	NA	False	AAAAAG	-18	NA	58635192	58635410	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_58635200_58635400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067666	chr16	-	1326	8	FSM	ENSMUSG00000022722.19	ENSMUST00000023405.16	1696	8	-2	372	-2	7	multi-exon	FALSE	canonical	3	88	junction_5	9.94064014692275	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGAGTGTTCTGTTCATGC	NA	False	NA	NA	False	AATAAA	-17	NA	59459532	59433683	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_59434208_59439157_59439214_59441581_59441712_59443383_59443479_59444240_59444310_59444642_59444705_59452673_59452824_59459292
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067678	chr16	+	2655	1	FSM	ENSMUSG00000092029.2	ENSMUST00000165914.2	661	1	-171	-1823	-171	1823	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAGACCTTATATAAGCT	NA	False	NA	NA	False	AATAAA	-34	NA	61197447	61200102	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_61197400_61200100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067693	chr16	-	187	1	Intergenic	novelGene_2133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTCTGGACCTTATGAT	NA	False	NA	NA	False	NA	NA	NA	62600672	62600485	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_62600500_62600700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067711	chr16	+	3365	15	FSM	ENSMUSG00000022912.9	ENSMUST00000023629.9	3303	15	-60	-2	-60	2	multi-exon	FALSE	canonical	3	266	junction_5	24.011476847711	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCAATTTCTTTATTTAA	NA	False	NA	NA	False	AATAAA	-24	NA	62674609	62749711	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_62674868_62705763_62705922_62709343_62709369_62719238_62719326_62720688_62720812_62720915_62721048_62723854_62723981_62728024_62728147_62730360_62730477_62734160_62734351_62738437_62738606_62739875_62740045_62744878_62745028_62746690_62746917_62748395
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067753	chr16	+	4424	3	NNC	ENSMUSG00000054604.8	novel	4425	3	NA	NA	-9	-7	at_least_one_novel_splicesite	FALSE	canonical	3	384	junction_2	450.5	80	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAATCATATTTTGTTT	NA	False	NA	14	True	AATAAA	-23	NA	64672349	64679863	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_+_64672600_64673161_64673389_64675916
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067766	chr16	-	211	1	Intergenic	novelGene_2134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAATTAAGATTTTGTAAT	NA	False	NA	NA	False	NA	NA	NA	64684752	64684541	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_64684500_64684800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067774	chr16	-	229	1	Intergenic	novelGene_2135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGTTTAGAAATAGAAGGA	NA	False	NA	NA	False	AAAAAG	-24	NA	64727107	64726878	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_64726900_64727100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067783	chr16	-	211	1	Intergenic	novelGene_2136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATATATTTTTGAAATCT	NA	False	NA	NA	False	NA	NA	NA	64883170	64882959	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_64883000_64883200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067802	chr16	+	199	1	Intergenic	novelGene_2137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTATTTGTATTTTGTGTG	NA	False	NA	NA	False	TTTAAA	-3	NA	72457763	72457962	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_72457800_72458000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067813	chr16	+	2955	6	NNC	ENSMUSG00000022883.12	novel	6601	29	NA	NA	17393	3	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	19.2727787306346	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCCTTGTGTTGATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	72820701	72842986	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_+_72820840_72821019_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067819	chr16	-	4023	5	FSM	ENSMUSG00000032932.16	ENSMUST00000046283.16	4237	5	46	168	7	-168	multi-exon	FALSE	canonical	3	50	junction_2	5.78791845139511	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTTTTCTATCTTAAGA	4027	False	NA	2	True	AATAAA	-25	NA	75563663	75552077	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_75555337_75556302_75556471_75557983_75558198_75561831_75562173_75563622
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067826	chr16	-	471	2	Intergenic	novelGene_2138	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCCTTGCTGTAACCAT	NA	False	NA	NA	False	NA	NA	NA	75739586	75739058	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_75739469_75739525
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067864	chr16	-	3590	5	FSM	ENSMUSG00000022863.16	ENSMUST00000023570.14	1414	5	4	-2180	4	2180	multi-exon	FALSE	canonical	3	648	junction_4	83.7895429036345	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTGCAGTCTATTAACT	NA	False	NA	NA	False	AATAAA	-16	NA	78173694	78154567	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_78157427_78161689_78161898_78166000_78166139_78170132_78170312_78173488
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067888	chr16	-	4205	1	Intergenic	novelGene_2139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTTTGTTGCGTCT	NA	False	NA	NA	False	NA	NA	NA	82008776	82004571	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_82004600_82008800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067895	chr16	-	1113	10	FSM	ENSMUSG00000022889.8	ENSMUST00000116584.2	2294	10	480	701	-32	-701	multi-exon	FALSE	canonical	3	703	junction_1	110.666443551761	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTCCCTGCTCTGCAG	NA	False	NA	NA	False	AATAAA	-19	NA	84532150	84515164	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_84515273_84517157_84517206_84520725_84520880_84522012_84522079_84524371_84524485_84527306_84527375_84527715_84527816_84529229_84529370_84531294_84531502_84532041
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067912	chr16	-	230	1	Intergenic	novelGene_2140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCGTGGTGGCGCACG	NA	False	NA	NA	False	NA	NA	NA	84566056	84565826	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_84565800_84566100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067926	chr16	+	2265	4	FSM	ENSMUSG00000053062.17	ENSMUST00000098407.3	1998	4	-264	-3	-1	3	multi-exon	TRUE	canonical	3	4189	junction_2	31.1555238547945	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTCAGAATAAACATTCC	NA	False	NA	NA	False	NA	NA	NA	84571009	84607887	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067953	chr16	-	622	4	ISM	ENSMUSG00000022890.14	ENSMUST00000023608.14	809	5	624	0	4	0	3prime_fragment	FALSE	canonical	3	5740	junction_3	655.078790850553	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	84631889	84624758	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr16_-_84624884_84625312_84625438_84628216_84628396_84631696
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067954	chr16	-	474	4	NNC	ENSMUSG00000022890.14	novel	809	5	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	3	545	junction_3	2933.80515144866	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	84631746	84624758	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_-_84624884_84625312_84625438_84628216_84628391_84631696
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067955	chr16	-	533	5	ISM	ENSMUSG00000022890.14	ENSMUST00000114191.8	742	6	646	0	-25	0	3prime_fragment	FALSE	canonical	3	198	junction_4	3188.04854103572	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	84631745	84624758	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr16_-_84624884_84625312_84625438_84628216_84628396_84630707_84630763_84631696
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067976	chr16	+	4701	10	FSM	ENSMUSG00000008976.17	ENSMUST00000114184.8	2202	10	-31	-2468	-31	4	multi-exon	FALSE	canonical	3	375	junction_1	83.9617784882715	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTTTGTTTTCTTCT	NA	False	NA	10	True	AATAAA	-19	NA	84631781	84660671	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000067991	chr16	+	4783	10	FSM	ENSMUSG00000008976.17	ENSMUST00000009120.8	4987	10	208	-4	208	4	multi-exon	FALSE	canonical	3	317	junction_1	99.7045016753055	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTTTGTTTTCTTCT	NA	False	NA	10	True	AATAAA	-19	NA	84632219	84660671	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068010	chr16	+	194	1	Intergenic	novelGene_2141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCTATGCGTTGGCCAA	NA	False	NA	NA	False	NA	NA	NA	85582388	85582582	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_85582400_85582600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068017	chr16	+	1852	6	FSM	ENSMUSG00000044442.12	ENSMUST00000054442.11	1884	6	39	-7	-3	7	multi-exon	FALSE	canonical	3	84	junction_5	18.2931681236466	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGTGTAGCGTCTGTT	NA	False	NA	8	True	AATAAA	-33	NA	87151111	87165637	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_87151275_87153065_87153153_87153785_87153877_87159407_87159492_87163026_87163169_87164352
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068048	chr16	+	218	1	Intergenic	novelGene_2142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTAATCCCTTTATAAAA	NA	False	NA	NA	False	TTTAAA	-1	NA	87234454	87234672	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_87234500_87234700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068052	chr16	+	2935	18	FSM	ENSMUSG00000025616.15	ENSMUST00000026710.12	3205	18	272	-2	-4	2	multi-exon	FALSE	canonical	3	153	junction_5	31.0441141639032	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTAGAGTTTAAGTTG	NA	False	NA	12	True	AATAAA	-20	NA	87251862	87280407	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068070	chr16	-	2447	15	FSM	ENSMUSG00000025613.14	ENSMUST00000026704.14	2394	15	-53	0	-53	0	multi-exon	FALSE	canonical	3	4287	junction_9	381.591725405517	1804	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAGGTGAACATAATTTAT	NA	False	NA	-13	True	AATAAA	-28	NA	87292814	87280213	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068084	chr16	-	177	1	Intergenic	novelGene_2143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAATGTCAGTACATAT	NA	False	NA	NA	False	NA	NA	NA	87318796	87318619	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_87318600_87318800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068105	chr16	-	185	1	Intergenic	novelGene_2144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAGATTTCTATT	NA	False	NA	NA	False	NA	NA	NA	89912627	89912442	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_89912400_89912600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068106	chr16	+	181	1	Intergenic	novelGene_2145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGCTGAGGAAGACAGCT	NA	False	NA	NA	False	NA	NA	NA	89921165	89921346	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_89921200_89921300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068116	chr16	+	646	5	FSM	ENSMUSG00000022982.11	ENSMUST00000023707.11	641	5	-1	-4	-1	4	multi-exon	FALSE	canonical	0	0	junction_1	320.427351360648	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGACTCCTTTGACTG	NA	False	NA	23	True	ATTAAA	-22	NA	90017640	90023221	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_90017818_90019667_90019765_90021243_90021314_90022032_90022151_90023037
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068128	chr16	-	4436	20	FSM	ENSMUSG00000022983.17	ENSMUST00000039280.9	4266	20	-66	-104	12	0	multi-exon	FALSE	canonical	3	105	junction_2	46.4080420960757	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTAATGTGTGCTATTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	90081379	90025838	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068136	chr16	-	4348	20	FSM	ENSMUSG00000022983.17	ENSMUST00000163419.9	4175	20	-173	0	22	0	multi-exon	TRUE	canonical	3	110	junction_9	44.050650776067	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTAATGTGTGCTATTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	90081369	90025838	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_90027133_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068145	chr16	-	4419	20	NIC	ENSMUSG00000022983.17	novel	4175	20	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_2	45.9499908819345	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTAATGTGTGCTATTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	90081374	90025838	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_-_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068166	chr16	+	177	1	Intergenic	novelGene_2146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAATTAAAGTAATT	NA	False	NA	NA	False	NA	NA	NA	90060425	90060602	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_90060400_90060600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068177	chr16	-	181	1	Intergenic	novelGene_2147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAATGTTAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	90089853	90089672	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_90089700_90089900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068183	chr16	+	234	1	Intergenic	novelGene_2148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAATGGTGACCATCCAG	154	False	NA	NA	False	NA	NA	NA	90090082	90090316	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_90090100_90090300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068194	chr16	-	169	1	Intergenic	novelGene_2149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAAAAAATATATATATT	NA	False	NA	NA	False	NA	NA	NA	90097270	90097101	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_90097100_90097300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068195	chr16	-	185	1	Intergenic	novelGene_2150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGAAATTACTC	NA	False	NA	NA	False	NA	NA	NA	90106511	90106326	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_90106300_90106500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068204	chr16	+	199	1	Intergenic	novelGene_2151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCACGTTAGTGGACAC	NA	False	NA	NA	False	NA	NA	NA	90109211	90109410	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_90109200_90109400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068235	chr16	-	7350	39	FSM	ENSMUSG00000039929.15	ENSMUST00000140920.2	7344	39	-6	0	-6	0	multi-exon	FALSE	canonical	3	66	junction_16	15.3989422955836	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTTGTACTTTGTTT	8673	False	NA	-10	True	AATAAA	-16	NA	90607286	90548414	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_90549067_90550210_90550811_90551698_90551941_90552961_90553160_90554630_90554741_90556686_90556831_90557278_90557386_90558510_90558623_90559154_90559316_90563542_90563652_90563904_90564077_90564918_90564983_90565089_90565201_90566275_90566470_90568356_90568416_90569467_90569655_90570151_90570351_90570936_90571790_90573012_90573193_90574241_90574461_90575935_90576130_90577090_90577262_90578398_90578538_90578944_90579062_90580163_90580284_90582989_90583103_90584215_90584333_90584971_90585102_90585822_90585997_90587962_90588101_90589573_90589770_90592248_90592374_90593245_90593381_90594780_90594867_90596907_90597005_90600214_90600348_90601335_90601488_90602285_90602426_90607086
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068242	chr16	-	1167	7	FSM	ENSMUSG00000022972.11	ENSMUST00000023694.11	1430	7	263	0	-25	0	multi-exon	FALSE	canonical	3	724	junction_4	16.7994708911389	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGTGTCATGAGAGC	NA	False	NA	2	True	NA	NA	NA	90731739	90722696	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_90722971_90723232_90723329_90723985_90724118_90724237_90724397_90726803_90726872_90727881_90728050_90731469
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068263	chr16	+	206	1	Intergenic	novelGene_2152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	356	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAGAAAAGTGAGGCTGG	NA	False	NA	NA	False	NA	NA	NA	90781690	90781896	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_90781700_90781900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068290	chr16	+	181	1	Intergenic	novelGene_2153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAGAGAGGGCCCTGGG	NA	False	NA	33	True	NA	NA	NA	91168937	91169118	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_91168900_91169100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068305	chr16	+	190	1	Intergenic	novelGene_2154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGAGAGAATTGGGAA	9312	False	NA	NA	False	NA	NA	NA	91234883	91235073	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_91234900_91235100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068330	chr16	+	222	1	Intergenic	novelGene_2155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGGCTGTTTCTTAGTT	NA	False	NA	NA	False	AAAAAG	-19	NA	91347627	91347849	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_91347600_91347800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068335	chr16	-	2275	7	FSM	ENSMUSG00000022964.15	ENSMUST00000023686.15	2347	7	73	-1	-63	1	multi-exon	FALSE	canonical	3	77	junction_3	6.43989302878722	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGAATCTGAGTCTTTTT	NA	False	NA	-5	True	AATAAA	-25	NA	91394615	91371389	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_91373047_91374861_91374920_91377089_91377183_91378582_91378651_91380163_91380277_91383829_91383970_91394469
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068353	chr16	-	3286	22	NIC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	424.919664276008	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443821	91418282	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_-_91418633_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068355	chr16	-	3445	22	NIC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	68	junction_21	407.127507368682	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443819	91418282	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443614
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068356	chr16	-	3348	22	FSM	ENSMUSG00000022962.16	ENSMUST00000023684.14	3518	22	-39	209	-39	-2	multi-exon	FALSE	canonical	3	1247	junction_21	231.829967404665	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443879	91418282	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068365	chr16	-	3309	22	FSM	ENSMUSG00000022962.16	ENSMUST00000232289.2	3276	22	-24	-9	-3	-2	multi-exon	FALSE	canonical	3	460	junction_21	338.409230453656	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443843	91418282	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440032_91443771
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068389	chr16	-	1903	11	FSM	ENSMUSG00000022962.16	ENSMUST00000120450.2	1865	11	-37	-1	-20	1	multi-exon	FALSE	canonical	3	1247	junction_10	242.657701299588	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTTGATTTTTTTTTTT	NA	False	NA	-1	True	AATAAA	-23	NA	91443860	91430291	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068397	chr16	-	1861	11	FSM	ENSMUSG00000022962.16	ENSMUST00000231380.2	1852	11	-8	-1	-2	1	multi-exon	FALSE	canonical	3	460	junction_10	453.295984981116	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTTGATTTTTTTTTTT	NA	False	NA	-1	True	AATAAA	-23	NA	91443821	91430291	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440032_91443771
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068419	chr16	+	8412	12	FSM	ENSMUSG00000022961.19	ENSMUST00000114037.9	8399	12	-13	0	-13	0	multi-exon	FALSE	canonical	3	171	junction_11	95.0516171212009	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCTTATTCTCTGG	NA	False	NA	14	True	AATAAA	-1	NA	91444753	91476083	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91474988
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068446	chr16	-	2388	10	FSM	ENSMUSG00000022960.14	ENSMUST00000023682.12	2365	10	-4	-19	-4	19	multi-exon	FALSE	canonical	3	157	junction_4	21.061344850545	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGCTTAGTTATATGTGT	NA	False	NA	18	True	AATAAA	-38	NA	91485662	91476133	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91484764_91485294
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068456	chr16	+	185	1	Intergenic	novelGene_2156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTCTAAAAAGACAATCCAAA	1445	False	NA	NA	False	NA	NA	NA	91477331	91477516	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_91477300_91477500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068464	chr16	-	1667	9	ISM	ENSMUSG00000058240.15	ENSMUST00000073466.13	1965	13	356	5016	4	0	5prime_fragment	FALSE	canonical	3	1431	junction_2	88.070195724774	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTTTTCTCTTTTTT	9184	False	NA	NA	False	AATAAA	-24	NA	91525507	91491225	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr16_-_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068515	chr16	+	794	3	FSM	ENSMUSG00000039680.11	ENSMUST00000047429.9	846	3	52	0	52	0	multi-exon	FALSE	canonical	3	238	junction_1	10.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACGGCTGTATTGCTTCT	6337	False	NA	5	True	AATAAA	-17	NA	91855209	91909115	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_91855369_91896481_91896622_91908620
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068521	chr16	-	177	1	Intergenic	novelGene_2157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTAGGGAATCGC	NA	False	NA	NA	False	NA	NA	NA	92090518	92090341	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_92090300_92090500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068527	chr16	+	517	4	FSM	ENSMUSG00000051989.12	ENSMUST00000063641.11	517	4	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_1	48.3482735529983	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTCTGCATTCTCTCT	NA	False	NA	26	True	AATAAA	-16	NA	92098173	92109929	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_92098232_92102175_92102286_92107688_92107858_92109749
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068537	chr16	-	2449	4	FSM	ENSMUSG00000022951.17	ENSMUST00000060005.15	2324	4	-123	-2	-123	2	multi-exon	FALSE	canonical	3	250	junction_3	18.4932420089069	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTGGTCGTTTTCTTT	NA	False	NA	-1	True	AATAAA	-26	NA	92263157	92188838	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_92190517_92192753_92192914_92194150_92194325_92262720
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068547	chr16	-	2192	4	FSM	ENSMUSG00000022951.17	ENSMUST00000023672.10	2190	4	0	-2	0	0	multi-exon	FALSE	canonical	3	20	junction_3	123.764112551077	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGTTGGTCGTTTTCT	NA	False	NA	-3	True	AATAAA	-24	NA	92196965	92188840	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_92190517_92192753_92192914_92194150_92194325_92196783
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068556	chr16	-	1734	11	NIC	ENSMUSG00000022948.17	novel	1816	12	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_10	28.7090578041147	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAGACTGTCTTAGTCG	NA	False	NA	-1	True	AATAAA	-21	NA	93400683	93380344	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93390134_93390224_93393185_93393224_93396099_93396196_93398525_93398687_93400453
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068562	chr16	+	193	1	Antisense	novelGene_ENSMUSG00000022948.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGTAAGCTGAGCAAGCC	NA	False	NA	NA	False	NA	NA	NA	93385602	93385795	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr16_+_93385600_93385800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068579	chr16	+	1195	3	FSM	ENSMUSG00000022947.9	ENSMUST00000039620.7	1170	3	-24	-1	-24	1	multi-exon	FALSE	canonical	3	122	junction_2	11	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTGGTTTTTGTTTGTT	NA	False	NA	21	True	ATTAAA	-23	NA	93480078	93487879	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_93480502_93481934_93482043_93487215
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068600	chr16	+	1955	14	FSM	ENSMUSG00000022945.13	ENSMUST00000023666.11	1922	14	-33	0	-33	0	multi-exon	FALSE	canonical	3	827	junction_1	52.2487224157954	236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCTGACTTCGCT	4333	False	NA	21	True	AATAAA	-29	NA	93680755	93703003	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_93680864_93681353_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068615	chr16	+	1054	4	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-574	1916	at_least_one_novel_splicesite	FALSE	canonical	3	174	junction_3	36.1693547388148	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTCCGCGTGATTCA	2290	False	NA	17	True	NA	NA	NA	93811725	93815011	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr16_+_93811971_93812291_93812370_93812713_93813006_93814572
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068629	chr16	+	1517	4	FSM	ENSMUSG00000022941.9	ENSMUST00000023660.9	1531	4	14	0	14	0	multi-exon	FALSE	canonical	3	15	junction_3	1.63299316185545	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGACAATCATCTTTTT	NA	False	NA	7	True	AATAAA	-15	NA	94129292	94137794	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_94129457_94130204_94130281_94134114_94134183_94136585
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068632	chr16	+	189	1	ISM	ENSMUSG00000022941.9	ENSMUST00000023660.9	1531	4	8032	295	8032	-295	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTAAGAAGATATGATCT	NA	False	NA	NA	False	NA	NA	NA	94137310	94137499	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr16_+_94137300_94137500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068641	chr16	-	736	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113906.9	745	5	4	5	4	0	multi-exon	TRUE	canonical	3	162	junction_4	117.933243828871	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAACCTTGAGTAGATCTA	NA	False	NA	NA	False	AATAAA	-23	NA	94171567	94165310	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171463
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068660	chr16	+	179	1	Intergenic	novelGene_2158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAGACAAGCATA	NA	False	NA	NA	False	NA	NA	NA	94203665	94203844	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_94203700_94203800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068661	chr16	-	2403	8	FSM	ENSMUSG00000022898.14	ENSMUST00000023615.7	2547	8	199	-55	-190	55	multi-exon	FALSE	canonical	3	328	junction_4	18.1490428150369	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGTGTTCCTCAGTAAT	NA	False	NA	-2	True	AGTAAA	-16	NA	94327490	94298586	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_94299942_94302393_94302547_94302940_94303092_94305160_94305236_94306222_94306304_94311596_94311747_94313088_94313233_94327196
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068691	chr16	+	3563	10	FSM	ENSMUSG00000022895.17	ENSMUST00000023612.17	3890	10	327	0	-53	0	multi-exon	FALSE	canonical	3	115	junction_1	14.5890200552621	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTTGTAATGTTGGATT	NA	False	NA	21	True	AATAAA	-21	NA	95503268	95522095	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_95503512_95507287_95507360_95510815_95510928_95512699_95512820_95513129_95513331_95515380_95515465_95516010_95516230_95517077_95517342_95518891_95519011_95519966
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068705	chr16	-	229	1	Intergenic	novelGene_2159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTGTAGCTTTGTTA	7194	False	NA	NA	False	AAGAAA	-30	NA	95761927	95761698	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_95761700_95761900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068727	chr16	+	195	1	Intergenic	novelGene_2160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACACAGGTGGGTGGGCAG	3213	False	NA	NA	False	NA	NA	NA	95828100	95828295	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_95828100_95828300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068741	chr16	+	195	1	Intergenic	novelGene_2161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCGAATTCTCTTCACCA	NA	False	NA	NA	False	NA	NA	NA	95877880	95878075	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_95877900_95878100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068748	chr16	+	178	1	Intergenic	novelGene_2162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTTAAAAGAGC	NA	False	NA	NA	False	NA	NA	NA	95913775	95913953	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_95913800_95914000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068757	chr16	-	1240	6	FSM	ENSMUSG00000040681.17	ENSMUST00000050884.16	2174	6	-28	962	-28	654	multi-exon	FALSE	canonical	3	5886	junction_4	404.27841891449	526	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGATTAATTTTCTGAT	NA	False	NA	-3	True	AATAAA	-27	NA	95928957	95922779	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_95923618_95925922_95926046_95928352_95928404_95928510_95928541_95928631_95928662_95928789
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068774	chr16	+	2499	5	FSM	ENSMUSG00000023147.18	ENSMUST00000023913.11	2495	5	-9	5	-9	1	multi-exon	FALSE	canonical	3	306	junction_2	29.2350389088163	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTACTGTGGAAAGCGT	NA	False	NA	25	True	AATAAA	-19	NA	95946597	95959047	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_+_95946779_95953012_95953179_95954170_95954239_95955280_95955396_95957078
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068790	chr16	-	178	1	Intergenic	novelGene_2163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGGAGTTAAC	NA	False	NA	NA	False	NA	NA	NA	97058991	97058813	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_-_97058800_97059000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068793	chr16	-	3580	8	FSM	ENSMUSG00000005251.16	ENSMUST00000019386.10	3591	8	11	0	11	0	multi-exon	FALSE	canonical	3	41	junction_1	9.512612465478	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGCAGACTATTATTTCTT	NA	False	NA	2	True	AATAAA	-22	NA	97564976	97543132	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_97545445_97547059_97547325_97548492_97548597_97549222_97549382_97551292_97551343_97552693_97552843_97556267_97556560_97564727
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068808	chr16	+	2753	1	Antisense	novelGene_ENSMUSG00000014039.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCAAAACAAAACCAGACCG	NA	False	NA	NA	False	NA	NA	NA	97619584	97622337	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr16_+_97619600_97622300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068824	chr16	-	3097	4	FSM	ENSMUSG00000046962.17	ENSMUST00000052089.9	3072	4	-22	-3	-9	3	multi-exon	FALSE	canonical	3	41	junction_1	18.4451137763426	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGGATGAATTAATACT	NA	False	NA	2	True	AATAAA	-30	NA	97763831	97750957	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr16_-_97752070_97752669_97754294_97757957_97758101_97763613
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068852	chr16	+	190	1	Intergenic	novelGene_2164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAATGCAAAACCCTTAC	NA	False	NA	NA	False	NA	NA	NA	97792784	97792974	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr16_+_97792800_97793000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068873	chr17	+	4803	21	NIC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-5	59439	combination_of_known_splicesites	FALSE	canonical	3	64	junction_20	27.9703414351702	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGGCTGTGGCTTCAG	9434	False	NA	99	True	NA	NA	NA	3165241	3308573	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034_3248499_3308012
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068876	chr17	+	4878	20	FSM	ENSMUSG00000046201.10	ENSMUST00000076734.8	4866	20	-12	0	-5	0	multi-exon	TRUE	canonical	3	106	junction_1	21.7366509485669	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTTCTAGGAATTGTAT	9434	False	NA	11	True	AATAAA	-18	NA	3165241	3249134	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068888	chr17	+	179	1	Intergenic	novelGene_2165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTTTGTTTTTT	1016	False	NA	NA	False	NA	NA	NA	3327696	3327875	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_3327700_3327900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068892	chr17	-	1404	7	FSM	ENSMUSG00000036983.8	ENSMUST00000041003.8	1402	7	18	-20	-9	20	multi-exon	FALSE	canonical	3	69	junction_2	6.8414585839246	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGCCCAAAGGACTGG	NA	False	NA	NA	False	AATAAA	-36	NA	3608038	3569510	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_3570071_3571919_3572048_3586352_3586473_3593371_3593524_3595857_3595967_3605206_3605359_3607855
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068898	chr17	-	191	1	Intergenic	novelGene_2166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGGGGAAAGCTTAATCA	NA	False	NA	NA	False	NA	NA	NA	3572301	3572110	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_3572100_3572300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068907	chr17	+	179	1	Intergenic	novelGene_2167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATATTGGAATGATATT	NA	False	NA	NA	False	NA	NA	NA	4102407	4102586	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_4102400_4102600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068910	chr17	-	169	1	Intergenic	novelGene_2168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTCCACAGCATCTCAA	NA	False	NA	NA	False	NA	NA	NA	5266267	5266098	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_5266100_5266300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068918	chr17	-	967	4	FSM	ENSMUSG00000004945.16	ENSMUST00000005053.14	948	4	-17	-2	-1	2	multi-exon	FALSE	canonical	3	675	junction_1	16.0485374896143	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGGGCGTGTGTGTCTGTG	3451	False	NA	-6	True	NA	NA	NA	5490535	5461142	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_5461743_5483716_5483855_5489806_5489908_5490407
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068932	chr17	+	3334	18	FSM	ENSMUSG00000002365.11	ENSMUST00000002436.11	3331	18	-1	-2	-1	2	multi-exon	FALSE	canonical	3	159	junction_6	26.0644662593364	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCAGATTCCCAAAGTATG	NA	False	NA	NA	False	AATAAA	-19	NA	5891602	5982231	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068948	chr17	-	190	1	Intergenic	novelGene_2169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTGAATTGGCTTTGTTT	5697	False	NA	NA	False	NA	NA	NA	6126912	6126722	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_6126700_6126900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068971	chr17	+	215	1	Intergenic	novelGene_2170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGTTTGGCCTGTTTTGC	NA	False	NA	NA	False	AAAACA	-17	NA	6341235	6341450	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_6341200_6341400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068973	chr17	-	746	5	FSM	ENSMUSG00000092074.3	ENSMUST00000169415.3	3321	5	26	2549	26	-2549	multi-exon	TRUE	canonical	3	2579	junction_4	2048.76394138027	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTGTTCCTTGTAGCC	NA	False	NA	NA	False	AATAAA	-17	NA	6367749	6360817	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_6361219_6361567_6361646_6361983_6362108_6365191_6365234_6367648
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000068991	chr17	+	194	1	Intergenic	novelGene_2171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGCTGAAACCTCTACCA	NA	False	NA	NA	False	NA	NA	NA	6383958	6384152	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_6384000_6384200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069001	chr17	+	243	1	Intergenic	novelGene_2172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCAATTGCTACTTCAT	NA	False	NA	NA	False	NA	NA	NA	6462834	6463077	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_6462800_6463100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069012	chr17	+	497	1	Intergenic	novelGene_2173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	426	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACATTTAAAATACGGAGG	NA	False	NA	NA	False	GATAAA	-3	NA	6463280	6463777	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_6463300_6463800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069027	chr17	+	243	1	Intergenic	novelGene_2174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCAATTGCTACTTCAT	6539	False	NA	NA	False	NA	NA	NA	6679958	6680201	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_6680000_6680200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069030	chr17	+	227	1	Intergenic	novelGene_2175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	334	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAGAGGAAGA	6985	False	NA	NA	False	NA	NA	NA	6680404	6680631	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_6680400_6680600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069043	chr17	+	747	5	FSM	ENSMUSG00000096255.3	ENSMUST00000179569.3	771	5	25	-1	25	1	multi-exon	TRUE	canonical	3	3024	junction_1	2440.4692555941	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTGTTCCTTGTAGCC	NA	False	NA	NA	False	AATAAA	-17	NA	6697535	6703696	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_6697638_6699278_6699321_6702406_6702531_6702868_6702947_6703295
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069053	chr17	+	4478	2	ISM	ENSMUSG00000096255.3	ENSMUST00000179569.3	771	5	66	0	66	0	intron_retention	FALSE	canonical	3	3024	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6697576	6703695	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr17_+_6697638_6699278
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069066	chr17	-	761	6	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10120	-15007	at_least_one_novel_splicesite	FALSE	canonical	3	134	junction_1	242.285286387762	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCGTGTTTCTTTTCCCC	2348	False	NA	NA	False	AATAAA	-15	NA	6744541	6723807	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_-_6724073_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069082	chr17	-	184	1	Intergenic	novelGene_2176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTAAAAGGAAAAGGACTAC	NA	False	NA	NA	False	NA	NA	NA	6796409	6796225	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_6796200_6796400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069085	chr17	+	211	1	Intergenic	novelGene_2177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGCAGGAACTTTGCCCC	2314	False	NA	NA	False	NA	NA	NA	6818910	6819121	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_6818900_6819100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069090	chr17	-	5453	1	Intergenic	novelGene_2178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	6848646	6843193	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_6843200_6848600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069110	chr17	+	4475	2	FSM	ENSMUSG00000000579.15	ENSMUST00000149027.8	493	2	-16	-3966	-16	351	multi-exon	FALSE	canonical	3	5304	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6869174	6875299	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_6869236_6870885
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069131	chr17	-	714	5	FSM	ENSMUSG00000095677.3	ENSMUST00000179554.3	771	5	57	0	-25	0	multi-exon	TRUE	canonical	3	5415	junction_4	1216.82506959711	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6923242	6916336	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_6916737_6917085_6917164_6917501_6917626_6920709_6920752_6923172
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069134	chr17	+	2660	16	NIC	ENSMUSG00000041831.18	novel	2244	16	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	13.5522035928561	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCCAGCATTTATTAACAA	NA	False	NA	12	True	AATAAA	-21	NA	6930412	7005449	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_6930610_6940859_6941395_6943610_6943830_6954660_6954726_6967051_6967104_6968636_6968704_6970278_6970358_6973292_6973418_6976495_6976631_6982782_6982962_6995637_6995741_7000350_7000522_7001864_7001971_7002776_7002874_7003809_7004016_7005125
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069140	chr17	-	177	1	Intergenic	novelGene_2179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGAGAGAGCGAGCAG	NA	False	NA	NA	False	NA	NA	NA	6936821	6936644	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_6936600_6936800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069160	chr17	+	158	1	Intergenic	novelGene_2180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAGAGGGAGAGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	7135756	7135914	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_7135800_7135900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069174	chr17	+	1002	9	FSM	ENSMUSG00000094724.9	ENSMUST00000089119.13	1783	9	277	504	-35	4	multi-exon	FALSE	canonical	0	0	junction_3	237.179784130098	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCTTTTTCTTGTGTGT	NA	False	NA	NA	False	AAAAAG	-15	NA	7246270	7265593	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_7246498_7248506_7248568_7251537_7251591_7252454_7252513_7256120_7256192_7259079_7259194_7262027_7262074_7263832_7263908_7265296
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069181	chr17	-	181	1	Intergenic	novelGene_2181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCACAAAGTTTAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	7283152	7282971	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_7283000_7283200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069185	chr17	+	5436	21	FSM	ENSMUSG00000023809.11	ENSMUST00000024575.8	5406	21	-30	0	-30	0	multi-exon	FALSE	canonical	3	147	junction_19	15.0827716285834	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTCTGGGATAATGAG	NA	False	NA	NA	False	AATAAA	-22	NA	7437483	7570714	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144_7560307_7562601_7562679_7563413_7563532_7566681_7566820_7567614
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069196	chr17	+	232	1	Intergenic	novelGene_2182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTACATCAATTCTGAG	NA	False	NA	NA	False	AAAAAG	-28	NA	7458411	7458643	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_7458400_7458600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069205	chr17	+	187	1	Intergenic	novelGene_2183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCCTAAGCTCTGGAGAG	NA	False	NA	NA	False	NA	NA	NA	7712824	7713011	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_7712800_7713000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069209	chr17	+	1544	8	FSM	ENSMUSG00000073471.4	ENSMUST00000097423.3	2189	8	325	320	-17	0	multi-exon	TRUE	canonical	3	57	junction_4	7.41482244134913	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTTTTCATTTATTTAAC	NA	False	NA	NA	False	NA	NA	NA	8164809	8198336	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_8165136_8171380_8171469_8188978_8189121_8191655_8191802_8192768_8192973_8194876_8195040_8197549_8197637_8197948
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069238	chr17	+	3111	13	FSM	ENSMUSG00000069135.12	ENSMUST00000097419.10	3505	13	67	327	28	2	multi-exon	TRUE	canonical	3	46	junction_7	116.477107908235	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACAGTGTTGGTTTTTT	NA	False	NA	32	True	ATTAAA	-24	NA	8384399	8415309	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8394350_8394411_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069242	chr17	+	3035	12	NNC	ENSMUSG00000069135.12	novel	3077	12	NA	NA	41	2	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_6	97.8703814759498	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACAGTGTTGGTTTTTT	NA	False	NA	32	True	ATTAAA	-24	NA	8384412	8415309	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8401062_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069250	chr17	+	935	4	NIC	ENSMUSG00000023861.18	novel	958	5	NA	NA	-9	6	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	472.094858641307	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGACTATATATCTTGCT	2146	False	NA	10	True	AATAAA	-24	NA	8502618	8516499	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_8502794_8515366_8515464_8515655_8515789_8515969
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069258	chr17	+	173	1	Intergenic	novelGene_2184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTAGGCCCCCTGTTC	3075	False	NA	NA	False	NA	NA	NA	8509419	8509592	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_8509400_8509600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069271	chr17	+	824	6	FSM	ENSMUSG00000073468.13	ENSMUST00000145276.8	810	6	-12	-2	-12	0	multi-exon	FALSE	canonical	3	190	junction_1	242.374586126516	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTCTGGATCAACTGTA	2978	False	NA	NA	False	AATAAA	-19	NA	8529988	8546274	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_8530118_8539431_8539514_8540631_8540668_8542108_8542168_8543265_8543296_8545786
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069281	chr17	+	207	1	Intergenic	novelGene_2185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCGGGCGGTGGTGGCGC	NA	False	NA	NA	False	NA	NA	NA	8547031	8547238	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_8547000_8547200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069289	chr17	+	207	1	Intergenic	novelGene_2186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCATTGAAATGTAAGAATG	NA	False	NA	NA	False	AATAAA	-4	NA	8598526	8598733	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_8598500_8598700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069297	chr17	+	2191	8	FSM	ENSMUSG00000062327.11	ENSMUST00000074667.9	2046	8	-150	5	-150	-5	multi-exon	FALSE	canonical	3	22	junction_5	7.70634511957782	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCTTTGTGGATTATT	NA	False	NA	5	True	AATAAA	-15	NA	8653104	8661323	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_8653569_8654022_8654288_8654942_8655078_8655809_8655872_8655981_8656044_8657447_8657622_8658741_8658872_8660424
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069321	chr17	-	4597	8	FSM	ENSMUSG00000062078.16	ENSMUST00000233645.2	8547	8	0	3950	0	0	multi-exon	FALSE	canonical	3	1001	junction_1	100.591718732463	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGACTATGTTTGTTTA	NA	False	NA	NA	False	AATAAA	-23	NA	10538309	10425479	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069340	chr17	-	5457	7	FSM	ENSMUSG00000062078.16	ENSMUST00000233828.2	5428	7	-19	-10	0	0	multi-exon	FALSE	canonical	3	312	junction_1	334.742396810177	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTGGCCCAGAGTTT	NA	False	NA	NA	False	AATAAA	-21	NA	10538309	10429107	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_10433124_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069341	chr17	-	5397	7	NNC	ENSMUSG00000062078.16	novel	6737	7	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_2	487.526979310433	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTGGCCCAGAGTTT	NA	False	NA	NA	False	AATAAA	-21	NA	10538273	10429107	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_-_10433124_10435088_10435365_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069369	chr17	-	5458	27	FSM	ENSMUSG00000014426.10	ENSMUST00000089058.7	5441	27	-17	0	-17	0	multi-exon	FALSE	canonical	2	131	junction_25	36.3765644044325	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGCGTCTGTTACTGGCT	NA	False	NA	1	True	AATAAA	-23	NA	12537700	12446507	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12461536_12461693_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12496807_12496999_12537384
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069370	chr17	-	5285	26	FSM	ENSMUSG00000014426.10	ENSMUST00000233755.2	5237	26	-48	0	0	0	multi-exon	FALSE	canonical	2	41	junction_10	48.1782357501808	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGCGTCTGTTACTGGCT	NA	False	NA	1	True	AATAAA	-23	NA	12537683	12446507	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12496807_12496999_12537384
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069389	chr17	+	187	1	Antisense	novelGene_ENSMUSG00000014426.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCCACATGATTTTATAAA	NA	False	NA	NA	False	AATACA	-37	NA	12495108	12495295	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr17_+_12495100_12495300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069402	chr17	+	202	1	Intergenic	novelGene_2187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGATATTTCAACCCAAC	3779	False	NA	NA	False	NA	NA	NA	12913766	12913968	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_12913800_12914000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069424	chr17	+	191	1	Intergenic	novelGene_2188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAAATACACAGCCTACA	NA	False	NA	NA	False	NA	NA	NA	13115705	13115896	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_13115700_13115900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069433	chr17	-	991	4	FSM	ENSMUSG00000057388.10	ENSMUST00000079121.4	1219	4	232	-4	-10	4	multi-exon	FALSE	canonical	3	996	junction_2	30.9120616516523	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTACTGTGTTGTGCTCT	NA	False	NA	-5	True	ATTAAA	-22	NA	13135000	13130231	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_13130637_13132656_13132889_13134524_13134712_13134833
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069445	chr17	+	2474	12	FSM	ENSMUSG00000068039.14	ENSMUST00000151287.8	2446	12	9	-37	9	37	multi-exon	FALSE	canonical	3	3235	junction_8	179.622239047203	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGGCTCCTGCTGTCT	NA	False	NA	5	True	NA	NA	NA	13135277	13143991	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069448	chr17	+	1839	11	FSM	ENSMUSG00000068039.14	ENSMUST00000089024.13	1902	11	64	-1	11	1	multi-exon	FALSE	canonical	3	149	junction_1	1038.79458989735	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGGGTTCCTGTCCTC	NA	False	NA	0	True	ATTAAA	-15	NA	13135279	13143444	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_13135517_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069465	chr17	-	2189	8	FSM	ENSMUSG00000023832.15	ENSMUST00000159697.2	1800	8	16	-405	16	0	multi-exon	FALSE	canonical	3	922	junction_2	94.6542580734146	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCTTGTCAGTGAGTT	NA	False	NA	0	True	NA	NA	NA	13179242	13161924	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_13162920_13163286_13163398_13165147_13165303_13166243_13166367_13167400_13167545_13171138_13171257_13175105_13175288_13178881
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069505	chr17	-	2037	8	FSM	ENSMUSG00000060475.14	ENSMUST00000007007.14	2051	8	14	0	14	0	multi-exon	FALSE	canonical	3	178	junction_3	195.055094257798	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTTGTTTTTTCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	13211132	13185685	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_13186939_13188291_13188447_13194182_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069528	chr17	+	212	1	Intergenic	novelGene_2189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAACCGGGGCCTAGCAAA	NA	False	NA	NA	False	NA	NA	NA	13208674	13208886	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_13208700_13208900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069538	chr17	+	5935	6	NIC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	1288.2053563	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGAGTTTGAATACCTA	NA	False	NA	NA	False	NA	NA	NA	13225730	13239021	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_13225849_13226747_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069541	chr17	+	5859	5	FSM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	2	0	2	0	multi-exon	FALSE	canonical	3	3082	junction_4	106.177622406984	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGAGTTTGAATACCTA	NA	False	NA	NA	False	NA	NA	NA	13226705	13239021	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069557	chr17	+	201	1	Intergenic	novelGene_2190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCACAGGGTCCAGCAGTG	NA	False	NA	NA	False	NA	NA	NA	13777761	13777962	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_13777800_13778000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069561	chr17	+	179	1	Intergenic	novelGene_2191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAAGTAGTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	13796466	13796645	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_13796500_13796600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069599	chr17	-	2752	4	FSM	ENSMUSG00000048826.8	ENSMUST00000053218.7	3250	4	320	178	320	-178	multi-exon	FALSE	canonical	3	62	junction_2	0.816496580927726	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGTCTTGTCTCTTCC	NA	False	NA	-3	True	AATAAA	-25	NA	14424036	14415491	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_14417574_14418078_14418355_14419407_14419541_14423775
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069610	chr17	+	1555	2	FSM	ENSMUSG00000050088.10	ENSMUST00000164837.3	2523	2	25	943	-14	5	multi-exon	FALSE	canonical	3	15	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTAAGGTCATCGTTAAT	NA	False	NA	13	True	AATAAA	-18	NA	15163516	15165253	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_15163582_15163763
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069634	chr17	-	4054	9	ISM	ENSMUSG00000023883.14	ENSMUST00000024657.12	1663	12	-41	2727	-41	2	5prime_fragment	FALSE	canonical	3	797	junction_6	66.6966078597705	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTGTCATCTTTTGCA	NA	False	NA	0	True	AATAAA	-22	NA	15181576	15167997	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr17_-_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069653	chr17	+	205	1	Intergenic	novelGene_2192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTTCGAGGCCAGCCT	NA	False	NA	NA	False	NA	NA	NA	15205235	15205440	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_15205200_15205400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069693	chr17	+	2672	2	ISM	ENSMUSG00000014763.9	ENSMUST00000055352.8	4420	11	65	29316	19	-4731	5prime_fragment	FALSE	canonical	3	53	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTTTTTTTTATTTG	NA	False	NA	NA	False	ATTAAA	-17	NA	15616528	15624384	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr17_+_15616823_15622006
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069696	chr17	+	2954	11	FSM	ENSMUSG00000014763.9	ENSMUST00000055352.8	4420	11	68	1398	22	-1398	multi-exon	TRUE	canonical	2	12	junction_2	12.6526677028997	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTAGTCTTTGAACTCA	NA	False	NA	7	True	ATTAAA	-21	NA	15616531	15652302	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_15616823_15622006_15623392_15626016_15626198_15627858_15627961_15634940_15635114_15637894_15637988_15643139_15643347_15644531_15644641_15646450_15646538_15651838_15651891_15652028
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069712	chr17	-	3631	5	NIC	ENSMUSG00000014769.11	novel	1758	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	4315	junction_3	337.796073837456	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTTCTTACACTGTGT	NA	False	NA	-13	True	ATTAAA	-15	NA	15718559	15696220	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_15696468_15697576_15697684_15710417_15713442_15714677_15714786_15718414
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069724	chr17	+	1808	8	FSM	ENSMUSG00000014767.18	ENSMUST00000162505.8	12794	8	34	10952	0	0	multi-exon	TRUE	canonical	3	150	junction_1	66.6565978791022	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGCTTGTCTGTT	NA	False	NA	23	True	AAGAAA	-31	NA	15720183	15737689	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_15720287_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069746	chr17	-	1130	6	FSM	ENSMUSG00000014771.14	ENSMUST00000054450.7	1120	6	-10	0	-10	0	multi-exon	FALSE	canonical	3	811	junction_3	58.5409258553364	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCAGTACCTCATAATT	NA	False	NA	-14	True	NA	NA	NA	15747573	15741836	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_15742056_15742177_15742292_15743064_15743169_15745530_15745663_15746634_15746875_15747252
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069751	chr17	+	219	1	Intergenic	novelGene_2193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGGATTGTCTAGCAAAG	NA	False	NA	NA	False	NA	NA	NA	15791822	15792041	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_15791800_15792000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069765	chr17	+	190	1	Intergenic	novelGene_2194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATCTGGTTATTGTGTG	NA	False	NA	NA	False	NA	NA	NA	15911652	15911842	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_15911700_15911800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069771	chr17	+	7960	36	FSM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	-40	-4	-40	4	multi-exon	TRUE	canonical	3	278	junction_29	37.9898375240279	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGTCTGCTATGTGAG	NA	False	NA	NA	False	AATAAA	-27	NA	15925188	15992876	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069809	chr17	+	2910	4	Intergenic	novelGene_2195	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	94	junction_1	21.5458168149231	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGAGTATGCTGCTCTT	NA	False	NA	30	True	NA	NA	NA	17225375	17261817	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_17225539_17257537_17257665_17257906_17257968_17259258
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069854	chr17	+	2481	4	FSM	ENSMUSG00000116802.2	ENSMUST00000231355.2	2194	4	-8	-279	-8	279	multi-exon	FALSE	canonical	3	89	junction_3	12.3917535302941	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAAGTATGCTGCTCTT	6216	False	NA	17	True	NA	NA	NA	17455125	17486604	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_17455288_17482739_17482867_17483108_17483170_17484473
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069866	chr17	+	2075	10	FSM	ENSMUSG00000116564.2	ENSMUST00000024620.8	3220	10	219	926	-44	-926	multi-exon	FALSE	canonical	3	346	junction_3	38.1895855495244	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTAGTTCTCTCTTTTCT	NA	False	NA	13	True	AATAAA	-22	NA	17594789	17614235	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_17594933_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229_17610327_17613716
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069891	chr17	+	186	1	Intergenic	novelGene_2196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGGAAAAAGAAAGAGTAGG	8138	False	NA	NA	False	NA	NA	NA	17958100	17958286	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_17958100_17958300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069927	chr17	+	198	1	Intergenic	novelGene_2197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAACATGGTTTTAAG	330	False	NA	NA	False	NA	NA	NA	21650965	21651163	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_21651000_21651200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069934	chr17	+	178	1	Intergenic	novelGene_2198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAAAAGTTTTTT	8854	False	NA	NA	False	NA	NA	NA	21659489	21659667	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_21659500_21659700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069956	chr17	+	2407	5	FSM	ENSMUSG00000057409.8	ENSMUST00000233158.2	3065	5	-10	668	-10	41	multi-exon	FALSE	canonical	3	42	junction_4	50.8527285403645	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAACTGTGGAAAAAGCT	1465	False	NA	NA	False	AATAAA	-28	NA	21709249	21730067	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_21709528_21711487_21711579_21720472_21720565_21725242_21725370_21728248
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069962	chr17	+	795	5	NNC	ENSMUSG00000057409.8	novel	3065	5	NA	NA	-3	-2211	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_4	24.0572234474388	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTTGTCTGAACAGTAAT	1472	False	NA	NA	False	AATAAA	-16	NA	21709256	21727815	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_+_21709528_21711487_21711579_21720472_21720565_21725242_21725370_21727601
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069973	chr17	+	2655	6	FSM	ENSMUSG00000067931.7	ENSMUST00000088787.7	2652	6	-3	0	-3	0	multi-exon	FALSE	canonical	3	80	junction_2	15.6025638918737	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATGGAAAGATTTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	21787266	21808961	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_21787508_21789310_21789390_21794118_21794219_21803291_21803405_21805041_21805169_21806966
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069988	chr17	+	4284	6	FSM	ENSMUSG00000067928.7	ENSMUST00000073312.7	4209	6	-75	0	-75	0	multi-exon	FALSE	canonical	3	33	junction_5	11.689311356962	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTGGAAATTCAATGAG	NA	False	NA	9	True	AATAAA	-24	NA	21926647	21944617	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_21926876_21927591_21927704_21928185_21928278_21938027_21938104_21939924_21940052_21940968
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000069999	chr17	+	4662	6	FSM	ENSMUSG00000061544.14	ENSMUST00000182827.8	640	6	-114	-3908	-114	0	multi-exon	FALSE	canonical	3	170	junction_1	15.5254629560603	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGACTTGTATCATAGT	NA	False	NA	12	True	AATAAA	-26	NA	21949661	21967950	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_21950033_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070011	chr17	-	3697	5	FSM	ENSMUSG00000069743.6	ENSMUST00000084141.6	3686	5	0	-11	0	11	multi-exon	TRUE	canonical	3	21	junction_3	11.3880419739304	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTGCTCAATTTCC	NA	False	NA	-1	True	NA	NA	NA	22064740	22035854	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_22039170_22040050_22040178_22042824_22042873_22059604_22059696_22064624
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070019	chr17	-	3303	6	FSM	ENSMUSG00000071267.12	ENSMUST00000091879.12	3265	6	-38	0	-25	0	multi-exon	TRUE	canonical	3	43	junction_3	17.9041894538681	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	22181470	22145940	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_22148471_22149346_22149474_22151973_22152095_22160706_22160832_22172868_22173035_22181236
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070043	chr17	-	2717	6	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_3	20.2484567313166	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTTTTCAGTTTCA	NA	False	NA	NA	False	NA	NA	NA	22580381	22556963	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_-_22559089_22559947_22560075_22562620_22562675_22577803_22577897_22578420_22578506_22580148
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070079	chr17	-	2108	6	FSM	ENSMUSG00000062012.15	ENSMUST00000115516.11	2104	6	-4	0	-4	0	multi-exon	TRUE	canonical	3	79	junction_1	5.98665181883831	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGGCTCTGTGTGCTTG	4819	False	NA	0	True	ATTAAA	-21	NA	23805210	23794817	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_23796086_23799085_23799207_23799744_23799837_23800030_23800245_23804411_23804549_23804934
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070087	chr17	+	243	1	Intergenic	novelGene_2199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACTTATTCTTGCAGAG	10	False	NA	NA	False	NA	NA	NA	23808076	23808319	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_23808100_23808300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070097	chr17	+	213	1	Intergenic	novelGene_2200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAGAGAGAGAAAGA	1504	False	NA	NA	False	NA	NA	NA	23809645	23809858	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_23809600_23809900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070103	chr17	+	178	1	Intergenic	novelGene_2201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAGAAGAAGAAGAAGAAG	22	False	NA	NA	False	NA	NA	NA	23816432	23816610	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_23816400_23816600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070105	chr17	+	2751	6	FSM	ENSMUSG00000023902.19	ENSMUST00000095595.9	2698	6	-46	-7	-46	0	multi-exon	FALSE	canonical	3	153	junction_1	55.9335319821661	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGATTTTTTTACTTTT	833	False	NA	35	True	AGTAAA	-19	NA	23819783	23829993	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_23819934_23824478_23824939_23826097_23826363_23826553_23826619_23827081_23827140_23828240
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070135	chr17	+	552	1	ISM	ENSMUSG00000023902.19	ENSMUST00000120967.8	2609	7	9612	0	2978	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGATTTTTTTACTTTT	186	False	NA	35	True	AGTAAA	-19	NA	23829441	23829993	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr17_+_23829400_23830000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070144	chr17	+	199	1	Intergenic	novelGene_2202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACTGATACATGTGTTAT	4611	False	NA	NA	False	NA	NA	NA	23833866	23834065	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_23833900_23834100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070152	chr17	-	1451	14	FSM	ENSMUSG00000041319.15	ENSMUST00000095579.11	1450	14	0	-1	0	1	multi-exon	TRUE	canonical	3	160	junction_13	93.5049281997111	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGCATTTTATTCCCC	754	False	NA	-20	True	AATAAA	-15	NA	23892856	23887590	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487_23892714_23892807
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070159	chr17	-	1528	13	FSM	ENSMUSG00000041319.15	ENSMUST00000047436.11	1504	13	-24	0	5	0	multi-exon	FALSE	canonical	3	423	junction_10	38.5186643070603	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	770	False	NA	-21	True	AATAAA	-14	NA	23892840	23887591	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070160	chr17	-	1431	14	FSM	ENSMUSG00000041319.15	ENSMUST00000115490.9	1431	14	1	-1	1	0	multi-exon	FALSE	canonical	3	69	junction_13	116.170706876108	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	766	False	NA	-21	True	AATAAA	-14	NA	23892844	23887591	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487_23892714_23892814
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070197	chr17	+	1980	8	FSM	ENSMUSG00000023908.9	ENSMUST00000024701.9	2040	8	65	-5	53	0	multi-exon	TRUE	canonical	3	384	junction_2	52.6761379583211	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTTGTCCCTTTATT	3003	False	NA	34	True	AAAAAG	-45	NA	23945374	23955709	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_23945616_23951310_23951799_23952796_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070207	chr17	+	1546	8	NNC	ENSMUSG00000023908.9	novel	2040	8	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_3	138.628412436607	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTTGTCCCTTTATT	3036	False	NA	34	True	AAAAAG	-45	NA	23945407	23955709	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_+_23945616_23951310_23951799_23952796_23952890_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070243	chr17	-	3420	9	NIC	ENSMUSG00000040097.17	novel	2943	7	NA	NA	31	-7	combination_of_known_junctions	FALSE	canonical	3	21	junction_8	43.4667617266343	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGAGCTGCTGTGTGTC	7556	False	NA	-6	True	AATAAA	-18	NA	23990545	23971773	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_23972838_23974627_23974919_23975520_23975785_23979177_23979442_23979580_23980091_23981139_23981569_23981949_23982293_23989208_23989307_23990388
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070255	chr17	+	177	1	Intergenic	novelGene_2203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGGTTTGG	NA	False	NA	4	True	NA	NA	NA	24001074	24001251	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_24001100_24001300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070262	chr17	-	199	1	Intergenic	novelGene_2204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCCCTCCCCCCTCCTTT	6051	False	NA	NA	False	NA	NA	NA	24019185	24018986	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_24019000_24019200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070303	chr17	-	2459	6	FSM	ENSMUSG00000016946.7	ENSMUST00000017090.6	2443	6	0	-16	0	16	multi-exon	FALSE	canonical	3	983	junction_3	66.4090355298133	880	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGAAGTGTGTGGAGA	NA	False	NA	-6	True	AATAAA	-36	NA	24292459	24266691	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_24268419_24274898_24275025_24276714_24276811_24278195_24278288_24279216_24279326_24292150
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070326	chr17	-	7158	14	FSM	ENSMUSG00000024122.17	ENSMUST00000102927.10	7161	14	1	2	1	1	multi-exon	FALSE	canonical	3	123	junction_7	13.9033008723802	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGTTTGCCATGGAGC	NA	False	NA	-5	True	AATAAA	-16	NA	24360568	24292655	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_24298117_24298465_24298619_24299351_24299410_24306977_24307196_24310394_24310569_24312164_24312262_24312513_24312583_24317067_24317144_24319784_24319883_24320575_24320721_24325800_24325939_24326202_24326246_24329821_24330092_24360410
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070334	chr17	-	198	1	Intergenic	novelGene_2205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGACCATTCTATCTAT	NA	False	NA	NA	False	NA	NA	NA	24337814	24337616	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_24337600_24337800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070368	chr17	-	2163	10	FSM	ENSMUSG00000024118.15	ENSMUST00000024930.8	2166	10	6	-3	6	3	multi-exon	FALSE	canonical	3	183	junction_7	23.2426810463471	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGCAGTGGTGGTGCACG	3343	False	NA	NA	False	NA	NA	NA	24439758	24434024	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439108_24439225_24439285_24439490_24439590_24439664
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070391	chr17	-	3114	17	FSM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	-11	1030	-11	-1030	multi-exon	FALSE	canonical	3	665	junction_16	77.1289504660863	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGTGCTTCAACTGAAA	8664	False	NA	-2	True	AATAAA	-21	NA	24470394	24442201	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070397	chr17	-	3132	17	NIC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	-8	-1032	combination_of_known_junctions	FALSE	canonical	3	43	junction_16	200.408917902872	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTGTGCTTCAACTGA	8758	False	NA	-4	True	AATAAA	-19	NA	24470300	24442203	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470154
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070420	chr17	+	1647	7	FSM	ENSMUSG00000034681.18	ENSMUST00000115371.9	1646	7	2	-3	2	0	multi-exon	FALSE	canonical	3	629	junction_1	362.779738807019	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGCTGGTTTTACTGT	886	False	NA	NA	False	AATAAA	-21	NA	24633621	24644872	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_24633709_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070433	chr17	+	1929	9	FSM	ENSMUSG00000034681.18	ENSMUST00000163717.2	1920	9	-6	-3	6	0	multi-exon	FALSE	canonical	3	410	junction_1	446.592917963328	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGCTGGTTTTACTGT	907	False	NA	NA	False	AATAAA	-21	NA	24633642	24644872	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_24633709_24634014_24634137_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070443	chr17	+	1738	8	FSM	ENSMUSG00000034681.18	ENSMUST00000234977.2	1769	8	28	3	4	0	multi-exon	FALSE	canonical	3	75	junction_2	570.995335768505	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGCTGGTTTTACTGT	917	False	NA	NA	False	AATAAA	-21	NA	24633652	24644872	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_24633709_24634014_24634137_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070453	chr17	+	2004	1	FSM	ENSMUSG00000034681.18	ENSMUST00000234342.2	2106	1	121	-19	-8	19	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGAATGAGTGCCACAGC	924	False	NA	NA	False	NA	NA	NA	24633659	24635663	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_24633700_24635700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070472	chr17	+	1095	7	FSM	ENSMUSG00000024132.7	ENSMUST00000234304.2	1137	7	42	0	0	0	multi-exon	FALSE	canonical	3	455	junction_1	41.5508390074403	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTTAGCTCTTGTGTTC	4882	False	NA	11	True	TATAAA	-24	NA	24645656	24658294	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_24645717_24645826_24645914_24652106_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070485	chr17	-	2575	14	FSM	ENSMUSG00000024137.10	ENSMUST00000056032.9	2574	14	0	-1	0	0	multi-exon	FALSE	canonical	3	30	junction_6	25.0001183429152	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTGTGATTGGGTAGA	NA	False	NA	0	True	AATAAA	-17	NA	24674285	24662751	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_24663312_24663387_24663451_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664526_24664919_24665130_24665487_24665655_24665755_24665909_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070508	chr17	+	178	1	Intergenic	novelGene_2206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGGTATAATCT	NA	False	NA	NA	False	NA	NA	NA	24688081	24688259	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_24688100_24688300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070513	chr17	+	174	1	Intergenic	novelGene_2207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTAATAGTTAATGAGGA	NA	False	NA	12	True	TTTAAA	-2	NA	24688532	24688706	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_24688500_24688700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070545	chr17	-	3330	9	FSM	ENSMUSG00000024142.16	ENSMUST00000070888.14	3358	9	30	-2	-1	0	multi-exon	FALSE	canonical	3	60	junction_8	10.0374299499424	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGAGGCCGATTGCTTTC	9617	False	NA	0	True	AATAAA	-17	NA	24698022	24692524	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697453_24697985
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070560	chr17	-	158	1	Intergenic	novelGene_2208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAGAGACTGAGTGAGCA	6176	False	NA	NA	False	NA	NA	NA	24701463	24701305	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_24701300_24701500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070567	chr17	-	2635	21	NIC	ENSMUSG00000052752.16	novel	2687	21	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_12	105.422530798686	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746835	24727823	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731929_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735574_24737715_24737774_24738104_24738221_24746739
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070572	chr17	-	2582	21	NNC	ENSMUSG00000052752.16	novel	3003	21	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_14	101.901373886715	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746833	24727823	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732297_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104_24738221_24746739
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070577	chr17	-	2640	21	NIC	ENSMUSG00000052752.16	novel	2687	21	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	185	junction_18	68.0276414408143	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746834	24727823	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735574_24737715_24737774_24738104_24738221_24746739
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070581	chr17	-	2637	21	FSM	ENSMUSG00000052752.16	ENSMUST00000176652.8	3003	21	78	288	3	0	multi-exon	FALSE	canonical	3	280	junction_18	53.1587010751768	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746834	24727823	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104_24738221_24746739
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070585	chr17	-	2673	21	NIC	ENSMUSG00000052752.16	novel	2667	21	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_17	98.1200667549712	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746833	24727823	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733841_24735478_24735571_24737715_24737774_24738104_24738221_24746739
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070617	chr17	+	297	2	FSM	ENSMUSG00000093565.2	ENSMUST00000176921.2	298	2	1	0	1	0	multi-exon	TRUE	canonical	3	77	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTTTCAGACGTTGTG	4765	False	NA	14	True	AATAAA	-17	NA	24747222	24747718	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_24747411_24747609
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070623	chr17	-	1396	9	FSM	ENSMUSG00000079657.11	ENSMUST00000035797.16	1575	9	169	10	-7	1	multi-exon	FALSE	canonical	3	65	junction_8	7.78520230951001	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGTCATCTGTGGAAA	NA	False	NA	-12	True	AATAAA	-13	NA	24752693	24748037	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_24748618_24748714_24748792_24748887_24748945_24749028_24749095_24749364_24749418_24749616_24749684_24749759_24749802_24751185_24751297_24752350
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070636	chr17	+	198	1	Intergenic	novelGene_2209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAATAGAGTCCCCA	6045	False	NA	NA	False	NA	NA	NA	24759032	24759230	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_24759000_24759200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070653	chr17	-	5455	40	FSM	ENSMUSG00000002496.11	ENSMUST00000228412.2	5432	40	10	-33	7	1	multi-exon	TRUE	canonical	3	88	junction_15	40.1073674085831	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGCAGTCAGACAGCTTC	NA	False	NA	-10	True	AATAAA	-44	NA	24851594	24815461	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070667	chr17	+	1081	6	FSM	ENSMUSG00000041429.4	ENSMUST00000047611.4	1079	6	-1	-1	1	1	multi-exon	FALSE	canonical	3	194	junction_2	26.3772629360971	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGGCCCGTTGGCTTC	907	False	NA	12	True	AATAAA	-24	NA	24851654	24857812	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_24851829_24852900_24853140_24853698_24853870_24854561_24854722_24857397_24857504_24857581
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070671	chr17	+	984	6	FSM	ENSMUSG00000041429.4	ENSMUST00000234635.2	893	6	-32	-59	5	1	multi-exon	FALSE	canonical	3	27	junction_1	84.8042451767599	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGGCCCGTTGGCTTC	913	False	NA	12	True	AATAAA	-24	NA	24851660	24857812	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_24851738_24852900_24853140_24853698_24853870_24854561_24854722_24857397_24857504_24857581
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070678	chr17	-	2146	7	FSM	ENSMUSG00000002504.16	ENSMUST00000002572.6	2136	7	-5	-5	-5	5	multi-exon	FALSE	canonical	3	54	junction_5	35.3478743663919	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCCTGTGTGTTTTCTGAA	5136	False	NA	-1	True	ATTAAA	-22	NA	24869306	24858254	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_24859364_24859568_24859632_24860682_24860727_24860792_24860947_24861164_24861345_24866500_24866702_24868911
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070686	chr17	-	1237	2	ISM	ENSMUSG00000002504.16	ENSMUST00000019684.13	1717	6	4263	0	4230	0	3prime_fragment	FALSE	canonical	3	161	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCGCCTGTGTGTTTT	NA	False	NA	-6	True	ATTAAA	-17	NA	24859701	24858259	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr17_-_24859364_24859568
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070708	chr17	+	3342	12	FSM	ENSMUSG00000041130.11	ENSMUST00000047179.7	3283	12	-57	-2	3	2	multi-exon	FALSE	canonical	3	229	junction_6	142.469309439723	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGGTGTTCTGAGTCTC	1179	False	NA	14	True	AATAAA	-22	NA	24888663	24900992	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897679_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070730	chr17	+	3367	11	ISM	ENSMUSG00000041130.11	ENSMUST00000047179.7	3283	12	-7	0	-7	0	intron_retention	FALSE	canonical	3	229	junction_6	149.09942991172	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1229	False	NA	12	True	AATAAA	-20	NA	24888713	24900990	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897679_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070758	chr17	-	127	2	FSM	ENSMUSG00000090101.2	ENSMUST00000161706.2	183	2	56	0	56	0	multi-exon	FALSE	canonical	3	215	junction_1	0	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATCGTATGTTGGTGTTT	4357	False	NA	-8	True	AATAAA	-15	NA	24938883	24938504	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_24938582_24938833
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070770	chr17	+	954	6	FSM	ENSMUSG00000044533.16	ENSMUST00000170715.8	998	6	45	-1	-2	1	multi-exon	FALSE	canonical	3	3280	junction_1	2855.80020309545	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTTTTTTGTCTGT	6235	False	NA	2	True	AATAAA	-21	NA	24939081	24940901	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_24939107_24939246_24939427_24939507_24939706_24939942_24940277_24940596_24940689_24940776
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070773	chr17	+	1094	5	FSM	ENSMUSG00000044533.16	ENSMUST00000054289.13	1094	5	-2	2	-2	1	multi-exon	FALSE	canonical	3	8303	junction_1	1140.19655651997	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTTTTTTGTCTGT	6235	False	NA	2	True	AATAAA	-21	NA	24939081	24940901	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_24939427_24939507_24939706_24939942_24940277_24940596_24940689_24940776
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070784	chr17	+	1166	4	NIC	ENSMUSG00000044533.16	novel	998	6	NA	NA	0	1	intron_retention	FALSE	canonical	3	8303	junction_1	1277.14690706364	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTTTTTTGTCTGT	6400	False	NA	2	True	AATAAA	-21	NA	24939246	24940901	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_24939427_24939507_24940277_24940596_24940689_24940776
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070790	chr17	-	704	4	FSM	ENSMUSG00000040048.15	ENSMUST00000045602.9	732	4	28	0	28	0	multi-exon	FALSE	canonical	3	2001	junction_1	127.206743357243	220	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTCTGGTGACTAAA	NA	False	NA	NA	False	AATAAA	-22	NA	24943424	24941033	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_24941195_24941354_24941495_24941628_24941768_24943160
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070803	chr17	-	186	1	Intergenic	novelGene_2210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGTACCACTACCATCAG	NA	False	NA	-26	True	NA	NA	NA	24945146	24944960	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_24945000_24945100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070821	chr17	+	204	1	Intergenic	novelGene_2211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGTGGGCCCTGGGGCCT	NA	False	NA	NA	False	NA	NA	NA	24959547	24959751	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_24959500_24959800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070825	chr17	+	187	1	Intergenic	novelGene_2212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAAGTCTTTGAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	25006530	25006717	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_25006500_25006700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070834	chr17	+	1164	9	FSM	ENSMUSG00000024158.18	ENSMUST00000118788.8	1191	9	27	0	27	0	multi-exon	FALSE	canonical	3	330	junction_6	27.6812210713328	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCTTATGGACTCTTT	NA	False	NA	11	True	AAAAAG	-24	NA	25069490	25083424	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_25069643_25071704_25071881_25072605_25072671_25075611_25075730_25076489_25076599_25079919_25080024_25080286_25080389_25082650_25082731_25083166
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070846	chr17	+	2258	2	FSM	ENSMUSG00000046070.10	ENSMUST00000050714.8	2625	2	368	-1	-131	1	multi-exon	FALSE	canonical	3	22	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGACCTAGAGTGTGA	8143	False	NA	10	True	ATTAAA	-17	NA	25097599	25100985	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_25097799_25098926
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070883	chr17	+	1595	7	FSM	ENSMUSG00000024160.17	ENSMUST00000117890.8	1641	7	46	0	9	0	multi-exon	FALSE	canonical	3	99	junction_1	37.7388688519174	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTCTATTGTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	25105662	25111123	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_25105735_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070908	chr17	+	894	3	FSM	ENSMUSG00000038880.14	ENSMUST00000043907.14	918	3	24	0	5	0	multi-exon	FALSE	canonical	3	645	junction_1	12	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTGGTTTCATTACA	NA	False	NA	16	True	AATAAA	-16	NA	25114113	25115263	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_25114463_25114635_25114679_25114761
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070927	chr17	-	3891	5	FSM	ENSMUSG00000024165.10	ENSMUST00000024981.9	2672	5	-5	-1214	-5	1214	multi-exon	TRUE	canonical	3	1697	junction_3	70.6872513258225	461	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTGTGTCAGGATGACT	4768	False	NA	46	True	NA	NA	NA	25179668	25160229	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_25163653_25164553_25164603_25167611_25167755_25174991_25175141_25179541
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070959	chr17	-	3505	21	FSM	ENSMUSG00000024170.16	ENSMUST00000024987.6	3434	21	-68	-3	-6	3	multi-exon	TRUE	canonical	3	21	junction_20	19.5787512369916	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGGCTGCTTCTGTGGTT	NA	False	NA	-5	True	AATAAA	-17	NA	25334947	25318547	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334413
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070964	chr17	-	169	1	ISM	ENSMUSG00000024170.16	ENSMUST00000156698.2	4644	10	7210	6	486	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTGGAGCAAGCAGAGGT	NA	False	NA	NA	False	NA	NA	NA	25319914	25319745	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr17_-_25319700_25319900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070968	chr17	-	177	1	Intergenic	novelGene_2213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTTTCAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	25349352	25349175	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_25349200_25349400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000070998	chr17	+	947	1	FSM	ENSMUSG00000067722.5	ENSMUST00000232784.2	3109	1	36	2126	36	-2126	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAATTTTCTCACCTCCCC	NA	False	NA	15	True	AATACA	-20	NA	25403563	25404510	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_25403600_25404500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071002	chr17	+	4806	15	FSM	ENSMUSG00000015127.15	ENSMUST00000039734.12	4779	15	-27	0	-27	0	multi-exon	FALSE	canonical	3	27	junction_1	11.8347464903054	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTGGATCTTTGGGC	NA	False	NA	3	True	ATTAAA	-15	NA	25407343	25453417	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_25407467_25408439_25408650_25418740_25418918_25420015_25420150_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25437551_25437730_25447556_25447641_25448212_25448441_25449180_25449384_25449494_25449750_25450685
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071029	chr17	+	1184	6	FSM	ENSMUSG00000015126.10	ENSMUST00000063574.7	1192	6	9	-1	9	1	multi-exon	FALSE	canonical	3	375	junction_2	34.9685573050991	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTGCTTTGTACGTGGC	4612	False	NA	29	True	AATAAA	-19	NA	25459152	25461773	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_25459339_25459417_25459638_25460037_25460232_25460661_25460836_25461132_25461197_25461427
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071047	chr17	-	5824	6	NIC	ENSMUSG00000015120.16	novel	824	7	NA	NA	-43	1406	intron_retention	FALSE	canonical	3	4214	junction_5	346.443068916092	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGGTTGTGTCCTCT	4704	False	NA	-1	True	ATTAAA	-19	NA	25492400	25479483	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_25481466_25483739_25483820_25484092_25487588_25488165_25488250_25488376_25488454_25492294
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071049	chr17	-	2795	7	NIC	ENSMUSG00000015120.16	novel	824	7	NA	NA	-3	1406	combination_of_known_junctions	FALSE	canonical	3	247	junction_6	1729.90957535037	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGGTTGTGTCCTCT	4260	False	NA	-1	True	ATTAAA	-19	NA	25492844	25479483	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492455
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071050	chr17	-	2956	7	FSM	ENSMUSG00000015120.16	ENSMUST00000174031.8	824	7	-336	-1796	-3	1406	multi-exon	FALSE	canonical	3	4214	junction_6	321.557148886477	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGGTTGTGTCCTCT	4260	False	NA	-1	True	ATTAAA	-19	NA	25492844	25479483	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492294
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071051	chr17	-	2555	7	FSM	ENSMUSG00000015120.16	ENSMUST00000173713.8	890	7	0	-1665	0	1406	multi-exon	FALSE	canonical	3	206	junction_6	1745.07048568246	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGGTTGTGTCCTCT	3820	False	NA	-1	True	ATTAAA	-19	NA	25493284	25479483	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25493135
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071096	chr17	-	3115	22	FSM	ENSMUSG00000019214.15	ENSMUST00000048054.14	3214	22	-3	102	-3	2	multi-exon	FALSE	canonical	3	337	junction_21	100.708127696462	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTGCACTTGGCCTTC	5671	False	NA	1	True	TATAAA	-36	NA	25946396	25938001	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071098	chr17	-	3118	22	FSM	ENSMUSG00000019214.15	ENSMUST00000170070.3	3208	22	-12	102	-3	2	multi-exon	FALSE	canonical	3	468	junction_21	77.5978060329916	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTGCACTTGGCCTTC	5671	False	NA	1	True	TATAAA	-36	NA	25946396	25938001	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071113	chr17	-	3686	21	NIC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	-2	0	intron_retention	FALSE	canonical	3	337	junction_20	102.590886534818	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGGTCAGGCTCATAGG	5672	False	NA	-17	True	TATAAA	-18	NA	25946395	25938019	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071130	chr17	-	2140	16	FSM	ENSMUSG00000063011.8	ENSMUST00000238120.2	2165	16	25	0	25	0	multi-exon	TRUE	canonical	3	34	junction_13	10.6111052937739	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCCTGTAGTGTTCCTA	6617	False	NA	-2	True	AATAAA	-22	NA	25973326	25967586	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972037_25972351_25972399_25972747_25972792_25973105
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071131	chr17	-	2363	16	NIC	ENSMUSG00000063011.8	novel	2054	17	NA	NA	-2	0	intron_retention	FALSE	canonical	3	35	junction_15	10.4690018626419	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCCTGTAGTGTTCCTA	6589	False	NA	-2	True	AATAAA	-22	NA	25973354	25967586	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972399_25972747_25972792_25973105_25973197_25973316
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071135	chr17	-	2048	17	FSM	ENSMUSG00000063011.8	ENSMUST00000237359.2	2044	17	-2	-2	-2	0	multi-exon	FALSE	canonical	3	34	junction_13	11.5648646230728	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCCTGTAGTGTTCCTA	6589	False	NA	-2	True	AATAAA	-22	NA	25973354	25967586	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972037_25972351_25972399_25972747_25972792_25973105_25973197_25973316
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071147	chr17	+	2026	11	FSM	ENSMUSG00000002280.12	ENSMUST00000002350.11	2555	11	19	510	-9	26	multi-exon	FALSE	canonical	3	237	junction_8	20.6145579627602	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTTTCAAAGTTTTATTC	6939	False	NA	37	True	NA	NA	NA	25992768	26001796	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000214_26000353_26000661_26000820_26000989
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071163	chr17	-	919	5	FSM	ENSMUSG00000057411.10	ENSMUST00000072735.9	1321	5	403	-1	0	0	multi-exon	FALSE	canonical	3	112	junction_4	48.7185796180472	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTTTGTTCCAGGAAT	8370	False	NA	-1	True	AATAAA	-23	NA	26011369	26009473	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_26009753_26009906_26009958_26010319_26010461_26010545_26010651_26011026
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071180	chr17	-	1164	4	FSM	ENSMUSG00000002274.14	ENSMUST00000165838.9	2751	4	-17	1604	-17	0	multi-exon	FALSE	canonical	3	84	junction_2	5.71547606649408	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTAGTCATGGTCTT	5876	False	NA	-2	True	NA	NA	NA	26016074	26013798	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_26014266_26014347_26014408_26015214_26015616_26015838
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071192	chr17	-	189	1	Intergenic	novelGene_2214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGTGCACTTGGAACCG	NA	False	NA	NA	False	NA	NA	NA	26024850	26024661	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_26024700_26024800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071200	chr17	+	3079	9	FSM	ENSMUSG00000025737.6	ENSMUST00000026833.6	3099	9	21	-1	-1	1	multi-exon	FALSE	canonical	3	89	junction_2	16.5529453572468	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTGTCACTTTCATTGC	NA	False	NA	19	True	AATAAA	-21	NA	26042621	26047705	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_26043661_26044627_26044806_26044925_26045599_26046008_26046128_26046208_26046331_26046401_26046507_26046626_26046968_26047127_26047313_26047388
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071221	chr17	-	1425	7	FSM	ENSMUSG00000039615.10	ENSMUST00000044911.10	1803	7	395	-17	-13	17	multi-exon	FALSE	canonical	3	1378	junction_3	85.5336191213724	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGATTCATGGCTTTTTG	6740	False	NA	NA	False	AATACA	-27	NA	26051940	26049461	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769_26050936_26051019_26051219_26051665
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071244	chr17	-	1433	6	FSM	ENSMUSG00000039615.10	ENSMUST00000236565.2	1408	6	-25	0	-3	0	multi-exon	FALSE	canonical	3	1486	junction_1	49.0167318372002	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCATGTGCTGGTGCA	6762	False	NA	-19	True	AATAAA	-15	NA	26051918	26049609	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_26049985_26050075_26050193_26050282_26050606_26050769_26050936_26051019_26051219_26051665
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071253	chr17	-	2871	19	FSM	ENSMUSG00000025733.18	ENSMUST00000043897.16	3189	19	318	0	-3	0	multi-exon	FALSE	canonical	3	133	junction_18	11.3871272350258	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGACTGCTGTTTTTGTGT	6005	False	NA	0	True	NA	NA	NA	26063507	26057430	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061263_26061339_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071265	chr17	-	825	5	FSM	ENSMUSG00000025732.7	ENSMUST00000026828.7	842	5	17	0	-10	0	multi-exon	FALSE	canonical	3	256	junction_1	22.6770809408971	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCGGGTGTTGGTGATTG	7779	False	NA	-4	True	AATAAA	-15	NA	26087721	26082671	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_26083014_26083224_26083327_26083567_26083696_26087387_26087518_26087598
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071275	chr17	+	188	1	Intergenic	novelGene_2215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCTCTCAGCCGGGTAG	1859	False	NA	NA	False	NA	NA	NA	26089138	26089326	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_26089100_26089300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071290	chr17	+	813	6	FSM	ENSMUSG00000025731.17	ENSMUST00000026827.16	1243	6	426	4	0	-4	multi-exon	FALSE	canonical	3	287	junction_5	67.7542618585724	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTGCTGGGAATACCTG	7194	False	NA	35	True	AATAAA	-36	NA	26094473	26096139	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_26094701_26094933_26095097_26095193_26095254_26095468_26095537_26095634_26095714_26095923
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071294	chr17	+	1012	5	FSM	ENSMUSG00000025731.17	ENSMUST00000169308.8	1026	5	8	6	8	3	multi-exon	FALSE	canonical	3	348	junction_1	48.8287824955732	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCTTGCTGGGAATACC	7203	False	NA	33	True	AATAAA	-34	NA	26094482	26096137	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_26094701_26094933_26095097_26095193_26095254_26095468_26095537_26095634
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071309	chr17	-	2493	7	FSM	ENSMUSG00000025730.15	ENSMUST00000026826.14	2466	7	-27	0	-14	0	multi-exon	FALSE	canonical	3	152	junction_6	27.4104602904317	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTCTGGCTTCATCT	NA	False	NA	-1	True	AGTAAA	-17	NA	26138715	26101087	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_26102883_26103553_26103777_26104048_26104127_26109611_26109673_26110259_26110321_26138338_26138524_26138625
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071317	chr17	-	3108	11	FSM	ENSMUSG00000025728.17	ENSMUST00000026823.16	3173	11	65	0	-48	0	multi-exon	FALSE	canonical	3	238	junction_4	23.9309423132479	365	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGGTGTCCTGCTCGTC	NA	False	NA	1	True	AATAAA	-24	NA	26160957	26145394	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071339	chr17	-	4930	11	NIC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	3	0	intron_retention	TRUE	canonical	0	0	junction_4	23.9282260103001	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCATTCTGTTGTCACC	1725	False	NA	-6	True	AATAAA	-21	NA	26204767	26177337	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_26178708_26178780_26178960_26179038_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000_26184502_26204444
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071348	chr17	-	5383	15	FSM	ENSMUSG00000037098.19	ENSMUST00000122103.9	5383	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_10	23.7715530559927	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGCTTCTTTCTCCACAG	NA	False	NA	0	True	ATTAAA	-19	NA	26288519	26208009	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26227828_26227865_26230970_26231106_26232747_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071371	chr17	-	2016	9	FSM	ENSMUSG00000036775.14	ENSMUST00000040907.8	2224	9	189	19	72	0	multi-exon	FALSE	canonical	3	125	junction_7	27.3849867628232	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACTGATTCTACCATGGA	NA	False	NA	-23	True	NA	NA	NA	26309122	26300203	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26308937
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071377	chr17	-	912	5	FSM	ENSMUSG00000024177.10	ENSMUST00000025007.7	1006	5	94	0	-19	0	multi-exon	FALSE	canonical	3	296	junction_2	23.847169643377	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTACTTACTAGTTCTG	NA	False	NA	0	True	ATTAAA	-22	NA	26314482	26310707	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_26311127_26312590_26312704_26312832_26312935_26313110_26313245_26314338
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071392	chr17	-	219	1	Intergenic	novelGene_2216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGTGGTAGAAATTCCA	NA	False	NA	NA	False	AAGAAA	-21	NA	26328982	26328763	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_26328800_26329000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071394	chr17	+	3497	13	FSM	ENSMUSG00000024180.15	ENSMUST00000025010.14	3464	13	-32	-1	-15	1	multi-exon	FALSE	canonical	3	294	junction_7	42.026446699932	375	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGGTCTTTTTTTTTTTT	NA	False	NA	21	True	NA	NA	NA	26332257	26342229	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071415	chr17	+	1048	5	FSM	ENSMUSG00000024181.10	ENSMUST00000025014.10	1068	5	20	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	613.108677152754	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGAGTCCTGTGAGTTC	NA	False	NA	21	True	AGTAAA	-21	NA	26342493	26345587	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_26342824_26343529_26343683_26344230_26344366_26344451_26344539_26345244
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071419	chr17	+	1023	5	FSM	ENSMUSG00000024181.10	ENSMUST00000127647.3	1002	5	-21	0	3	0	multi-exon	FALSE	canonical	0	0	junction_2	671.536670629386	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGAGTCCTGTGAGTTC	NA	False	NA	21	True	AGTAAA	-21	NA	26342496	26345587	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_26342824_26343529_26343683_26344230_26344366_26344473_26344539_26345244
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071422	chr17	+	1573	4	NIC	ENSMUSG00000024181.10	novel	1068	5	NA	NA	-1	0	intron_retention	FALSE	canonical	3	1395	junction_2	20.2703943940144	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGAGTCCTGTGAGTTC	NA	False	NA	21	True	AGTAAA	-21	NA	26342516	26345587	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_26342824_26343529_26344366_26344451_26344539_26345244
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071438	chr17	+	3778	11	FSM	ENSMUSG00000024182.18	ENSMUST00000074370.11	3777	11	-2	1	-2	-1	multi-exon	FALSE	canonical	3	153	junction_9	74.468852549237	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGATATGTGATATACTA	NA	False	NA	10	True	AATAAA	-18	NA	26357659	26414784	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_26358016_26361591_26362551_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26411489_26411598_26412912_26413081_26413908
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071446	chr17	+	195	1	Intergenic	novelGene_2217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGCTTTACAAAAAGCCC	NA	False	NA	NA	False	NA	NA	NA	26374727	26374922	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_26374700_26374900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071476	chr17	+	217	1	Intergenic	novelGene_2218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGACTGTTTTCCTGAAGCA	NA	False	NA	NA	False	NA	NA	NA	26465675	26465892	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_26465700_26465900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071481	chr17	-	170	1	Intergenic	novelGene_2219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTAGATTAAAAACTCCAC	NA	False	NA	NA	False	NA	NA	NA	26471619	26471449	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_26471400_26471600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071492	chr17	+	1679	9	FSM	ENSMUSG00000024188.17	ENSMUST00000025023.15	1700	9	22	-1	22	0	multi-exon	FALSE	canonical	3	393	junction_1	74.6521098161331	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTTTACATTAGTGT	NA	False	NA	14	True	ATTAAA	-26	NA	26471891	26499694	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071504	chr17	+	1746	10	FSM	ENSMUSG00000024188.17	ENSMUST00000148894.2	1672	10	-77	3	26	0	multi-exon	FALSE	canonical	3	95	junction_2	196.74976273379	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTTTACATTAGTGT	NA	False	NA	14	True	ATTAAA	-26	NA	26471895	26499694	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_26472066_26472947_26473019_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071505	chr17	+	2732	9	FSM	ENSMUSG00000024188.17	ENSMUST00000133032.8	2670	9	-62	0	26	0	multi-exon	FALSE	canonical	3	162	junction_1	146.829354609356	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTTTACATTAGTGT	NA	False	NA	14	True	ATTAAA	-26	NA	26471895	26499694	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_26472066_26472947_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071537	chr17	+	198	1	Intergenic	novelGene_2220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGACAGTACCATATGT	NA	False	NA	NA	False	AATAAA	-33	NA	26489617	26489815	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_26489600_26489800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071544	chr17	-	201	1	Genic_Genomic	ENSMUSG00000118107.2	novel	NA	NA	NA	NA	23196	47	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGACTGTTTTCCCACCA	NA	False	NA	NA	False	AAAAAG	-21	NA	26686687	26686486	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr17_-_26686500_26686700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071557	chr17	-	1950	4	NNC	ENSMUSG00000024190.8	novel	2313	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	237.31132856791	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCGTGCTTTCTTTGG	NA	False	NA	-1	True	AATAAA	-19	NA	26727450	26724564	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_-_26725625_26725958_26726179_26726543_26726694_26726930
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071583	chr17	+	781	4	FSM	ENSMUSG00000015575.16	ENSMUST00000015719.16	823	4	42	0	0	0	multi-exon	FALSE	canonical	3	1134	junction_3	173.829418300432	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGCTCCAGTGTTTAAAA	NA	False	NA	37	True	AATAAA	-25	NA	26895385	26918621	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_26895553_26901651_26901700_26914328_26914459_26918185
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071585	chr17	+	765	4	NNC	ENSMUSG00000015575.16	novel	823	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	381	junction_3	528.401993435553	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGCTCCAGTGTTTAAAA	NA	False	NA	37	True	AATAAA	-25	NA	26895385	26918621	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_+_26895553_26901651_26901700_26914328_26914443_26918185
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071607	chr17	+	1085	6	FSM	ENSMUSG00000024191.16	ENSMUST00000015725.16	1098	6	13	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	9.09945053286186	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGTGGTAAATGCTTAAC	2007	False	NA	15	True	AATAAA	-15	NA	27000052	27011495	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_27000151_27002418_27002512_27005670_27005763_27008668_27008771_27009899_27010019_27010914
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071617	chr17	-	178	1	Intergenic	novelGene_2221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGGAGTGGTAGTGCA	9107	False	NA	0	True	NA	NA	NA	27029334	27029156	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_27029200_27029300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071624	chr17	+	180	1	Intergenic	novelGene_2222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATTATATTTTCTATT	5305	False	NA	NA	False	NA	NA	NA	27090281	27090461	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_27090300_27090500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071631	chr17	-	308	1	Intergenic	novelGene_2223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGGAAGAATGTGGATT	176	False	NA	NA	False	NA	NA	NA	27133739	27133431	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_27133400_27133700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071637	chr17	+	2327	11	FSM	ENSMUSG00000024301.11	ENSMUST00000078961.6	2631	11	10	294	10	-294	multi-exon	FALSE	canonical	3	91	junction_5	121.140785865042	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTTCTTAATCTTAGAT	NA	False	NA	9	True	AATAAA	-22	NA	27136074	27151263	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_27136260_27139770_27139906_27139993_27140094_27140780_27140835_27141649_27141698_27141878_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071648	chr17	+	194	1	Intergenic	novelGene_2224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACACAGCCCTTGAGTC	NA	False	NA	NA	False	NA	NA	NA	27140983	27141177	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_27141000_27141200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071664	chr17	-	810	5	FSM	ENSMUSG00000024194.17	ENSMUST00000237609.2	785	5	-24	-1	1	0	multi-exon	FALSE	canonical	3	511	junction_4	189.078026221981	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9374	False	NA	-17	True	AATAAA	-18	NA	27158421	27156945	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_27157151_27157391_27157442_27157545_27157761_27157857_27158067_27158290
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071672	chr17	-	590	6	FSM	ENSMUSG00000024194.17	ENSMUST00000114935.9	662	6	73	-1	-6	0	multi-exon	FALSE	canonical	3	227	junction_5	278.895392575783	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9351	False	NA	-17	True	AATAAA	-18	NA	27158444	27156945	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158424
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071677	chr17	-	655	7	FSM	ENSMUSG00000024194.17	ENSMUST00000025027.10	741	7	86	0	-19	0	multi-exon	FALSE	canonical	3	300	junction_6	250.570959122472	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9338	False	NA	-17	True	AATAAA	-18	NA	27158457	27156945	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158290_27158343_27158424
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071679	chr17	-	935	5	ISM	ENSMUSG00000024194.17	ENSMUST00000114935.9	662	6	86	-1	7	0	intron_retention	FALSE	canonical	3	797	junction_3	67.913547985656	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9364	False	NA	-17	True	AATAAA	-18	NA	27158431	27156945	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071699	chr17	+	211	1	Intergenic	novelGene_2225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTCTCTCTCTCTCTCT	6959	False	NA	NA	False	AAAAAG	-12	NA	27210302	27210513	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_27210300_27210500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071709	chr17	-	1977	6	FSM	ENSMUSG00000057789.15	ENSMUST00000078691.12	2387	6	408	2	-14	0	multi-exon	TRUE	canonical	3	126	junction_3	5.45527267879434	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTCGCCTGGCATCTTTA	NA	False	NA	-2	True	AATAAA	-18	NA	27247575	27238785	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_27240010_27240140_27240322_27241412_27241557_27241715_27241852_27244766_27244868_27247384
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071730	chr17	-	497	4	FSM	ENSMUSG00000024208.17	ENSMUST00000025045.15	500	4	0	3	0	2	multi-exon	TRUE	canonical	3	2713	junction_1	153.559977424675	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGGTTTGGAACTCATT	1947	False	NA	-1	True	AATAAA	-21	NA	27352890	27341639	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_27341815_27344120_27344191_27344857_27344933_27352713
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071739	chr17	+	178	1	Intergenic	novelGene_2226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACAAAACCAACCACCTC	NA	False	NA	NA	False	NA	NA	NA	27366861	27367039	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_27366900_27367000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071744	chr17	-	183	1	Intergenic	novelGene_2227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAATAAGCCGGGCAT	NA	False	NA	NA	False	NA	NA	NA	27396555	27396372	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_27396400_27396600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071766	chr17	+	175	1	Intergenic	novelGene_2228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGGTTTTGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	27439153	27439328	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_27439200_27439300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071769	chr17	-	2166	2	FSM	ENSMUSG00000117916.2	ENSMUST00000235429.2	2149	2	-11	-6	-11	6	multi-exon	TRUE	canonical	3	72	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGACTTGGGTTTTTTTG	6238	False	NA	-3	True	NA	NA	NA	27461644	27454042	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_27456112_27461547
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071786	chr17	+	181	1	Antisense	novelGene_ENSMUSG00000116657.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAATTTTAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	27764511	27764692	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr17_+_27764500_27764700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071808	chr17	+	1669	5	FSM	ENSMUSG00000046711.17	ENSMUST00000232265.2	1681	5	9	3	1	1	multi-exon	FALSE	canonical	3	3635	junction_2	873.596123789477	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGTGTAAGGAGCAT	NA	False	NA	NA	False	AATAAA	-24	NA	27775556	27782645	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_27775686_27778506_27778678_27779901_27779986_27780434_27780486_27781411
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071811	chr17	+	1675	5	FSM	ENSMUSG00000046711.17	ENSMUST00000232552.2	917	5	-58	-700	1	2	multi-exon	FALSE	canonical	3	1035	junction_1	1979.76797882984	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGGTGTAAGGAGCATT	NA	False	NA	NA	False	AATAAA	-25	NA	27775556	27782646	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_27775724_27778506_27778645_27779901_27779986_27780434_27780486_27781411
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071830	chr17	+	1760	6	FSM	ENSMUSG00000046711.17	ENSMUST00000118599.9	1045	6	110	-825	3	1	multi-exon	FALSE	canonical	3	168	junction_1	2332.99755679255	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGTGTAAGGAGCAT	NA	False	NA	NA	False	AATAAA	-24	NA	27775580	27782645	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_27775686_27775925_27776041_27778506_27778678_27779901_27779986_27780434_27780486_27781411
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071839	chr17	+	1682	5	FSM	ENSMUSG00000046711.17	ENSMUST00000119486.9	1030	5	-6	-646	4	1	multi-exon	FALSE	canonical	3	1035	junction_1	1821.9597964829	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGTGTAAGGAGCAT	NA	False	NA	NA	False	AATAAA	-24	NA	27775581	27782645	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_27775724_27778506_27778678_27779901_27779986_27780434_27780486_27781411
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071861	chr17	+	1637	5	FSM	ENSMUSG00000046711.17	ENSMUST00000232253.2	600	5	9	-1046	-3	1	multi-exon	FALSE	canonical	3	289	junction_4	2144.39797787164	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGTGTAAGGAGCAT	NA	False	NA	NA	False	AATAAA	-24	NA	27775623	27782645	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_27775724_27778506_27778678_27779901_27779986_27780434_27780486_27781414
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071872	chr17	+	1596	5	FSM	ENSMUSG00000046711.17	ENSMUST00000117600.9	1595	5	-1	0	-1	0	multi-exon	FALSE	canonical	3	289	junction_4	1949.43562345618	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGGTGTAAGGAGCA	NA	False	NA	NA	False	AATAAA	-23	NA	27775625	27782644	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_27775686_27778506_27778678_27779901_27779986_27780434_27780486_27781414
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071876	chr17	+	1753	6	NIC	ENSMUSG00000046711.17	novel	1045	6	NA	NA	-1	1	combination_of_known_splicesites	FALSE	canonical	3	50	junction_1	2362.29292002495	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGTGTAAGGAGCAT	NA	False	NA	NA	False	AATAAA	-24	NA	27775625	27782645	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_27775724_27775925_27776041_27778506_27778678_27779901_27779986_27780434_27780486_27781411
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071889	chr17	+	1599	5	NIC	ENSMUSG00000046711.17	novel	1595	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	289	junction_4	2070.90322987338	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTCTGGTGTAAGGAGC	NA	False	NA	NA	False	AATAAA	-22	NA	27775626	27782643	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_27775724_27778506_27778645_27779901_27779986_27780434_27780486_27781414
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071901	chr17	-	638	5	FSM	ENSMUSG00000062753.15	ENSMUST00000154473.9	862	5	28	196	-2	0	multi-exon	FALSE	canonical	3	219	junction_4	17.0934929139717	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCCTCCTTGGGTGGAC	NA	False	NA	49	True	AATAAA	-18	NA	27784702	27782742	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_27782991_27783122_27783229_27783358_27783385_27783535_27783725_27784633
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071908	chr17	+	192	1	Intergenic	novelGene_2229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGCTGGTGAGATGGCTC	NA	False	NA	NA	False	NA	NA	NA	27792357	27792549	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_27792400_27792500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071922	chr17	-	183	1	Intergenic	novelGene_2230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACAGTGATGGACGCTGA	NA	False	NA	NA	False	NA	NA	NA	27838498	27838315	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_27838300_27838500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071943	chr17	+	184	1	Intergenic	novelGene_2231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATTGTATTGGTGCCC	NA	False	NA	NA	False	NA	NA	NA	27879665	27879849	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_27879700_27879800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071947	chr17	+	199	1	Intergenic	novelGene_2232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATTCAGGGCCAGCCTG	NA	False	NA	NA	False	NA	NA	NA	27882409	27882608	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_27882400_27882600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071953	chr17	+	185	1	Intergenic	novelGene_2233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	317	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGTCTGTGTAGCCC	NA	False	NA	NA	False	NA	NA	NA	27893583	27893768	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_27893600_27893800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071973	chr17	+	775	6	FSM	ENSMUSG00000024217.11	ENSMUST00000071006.9	758	6	-14	-3	-11	0	multi-exon	FALSE	canonical	3	1664	junction_1	167.935225607971	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGTCCCTGTCCCTTGCA	NA	False	NA	21	True	AATAAA	-23	NA	28059046	28070942	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_28059144_28059437_28059481_28061243_28061353_28064156_28064247_28066926_28067032_28070611
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071982	chr17	+	8581	21	FSM	ENSMUSG00000039512.13	ENSMUST00000114849.3	8634	21	53	0	53	0	multi-exon	TRUE	canonical	3	66	junction_6	13.1601671721905	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTCCTCGTGTGTCTGTT	5838	False	NA	NA	False	ATTAAA	-16	NA	28075467	28119015	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_28075769_28095636_28095800_28095897_28095937_28096295_28096388_28098197_28098388_28098624_28098766_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28103579_28103886_28104027_28104380_28104523_28104874_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000071999	chr17	-	189	1	Intergenic	novelGene_2234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAGAAATCTGATTATGC	NA	False	NA	NA	False	NA	NA	NA	28283186	28282997	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_28283000_28283200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072022	chr17	+	2591	14	FSM	ENSMUSG00000024220.15	ENSMUST00000073534.10	2864	14	273	0	0	0	multi-exon	FALSE	canonical	3	64	junction_10	10.6092512939298	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGCTCCTCCATCATTT	NA	False	NA	4	True	AATAAA	-16	NA	28396375	28424860	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28420415_28421088_28421323_28421408_28421573_28422059_28422225_28423428_28423543_28424084
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072030	chr17	+	2247	11	FSM	ENSMUSG00000002257.9	ENSMUST00000002327.6	2277	11	25	5	0	-5	multi-exon	FALSE	canonical	3	110	junction_2	14.7461859475595	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGCTCCTGCCCTTCCCT	NA	False	NA	12	True	AATAAA	-17	NA	28426776	28447577	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_28426913_28435938_28436080_28436574_28436761_28438718_28438956_28439050_28439198_28442645_28442755_28442861_28443161_28444818_28444986_28445074_28445274_28446780_28446872_28447042
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072035	chr17	+	215	1	Intergenic	novelGene_2235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGGGAAGGCGGAGGAGG	NA	False	NA	NA	False	NA	NA	NA	28438371	28438586	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_28438400_28438600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072075	chr17	+	951	6	FSM	ENSMUSG00000037805.16	ENSMUST00000129935.8	949	6	-2	0	-1	0	multi-exon	FALSE	canonical	3	728	junction_3	2914.49848859113	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547555	28550006	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_28547593_28547784_28547860_28547940_28548255_28548347_28548497_28549498_28549672_28549803
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072076	chr17	+	1044	5	FSM	ENSMUSG00000037805.16	ENSMUST00000150103.3	1022	5	-18	-4	-1	0	multi-exon	FALSE	canonical	3	5482	junction_3	1550.72344004339	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547555	28550006	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_28547593_28547784_28547860_28547940_28548497_28549498_28549672_28549803
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072081	chr17	+	2045	4	NIC	ENSMUSG00000037805.16	novel	949	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	5715	junction_1	1410.70297684838	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547556	28550006	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_28547593_28547784_28547860_28547940_28549672_28549803
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072082	chr17	+	714	6	FSM	ENSMUSG00000037805.16	ENSMUST00000233427.2	729	6	15	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	3247.70076207769	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547556	28550006	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_28547593_28547787_28547860_28547940_28548022_28548347_28548497_28549498_28549672_28549803
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072101	chr17	+	2237	3	NIC	ENSMUSG00000037805.16	novel	1202	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	8416	junction_2	258	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547556	28550006	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_28547860_28547940_28549672_28549803
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072104	chr17	+	2318	2	FSM	ENSMUSG00000037805.16	ENSMUST00000141049.2	1618	2	-695	-5	0	0	multi-exon	FALSE	canonical	3	8416	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547556	28550006	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_28549672_28549803
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072108	chr17	+	2450	1	NIC	ENSMUSG00000037805.16	novel	830	6	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547556	28550006	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_28547600_28550000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072113	chr17	+	882	5	FSM	ENSMUSG00000037805.16	ENSMUST00000152665.3	901	5	24	-5	-6	0	multi-exon	FALSE	canonical	3	5482	junction_3	1346.05653205948	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547583	28550006	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_28547860_28547940_28548022_28548347_28548497_28549498_28549672_28549803
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072116	chr17	+	1206	4	FSM	ENSMUSG00000037805.16	ENSMUST00000232770.2	1202	4	-4	0	-4	0	multi-exon	FALSE	canonical	3	5482	junction_2	1519.39724891155	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547585	28550006	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_28547860_28547940_28548497_28549498_28549672_28549803
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072121	chr17	-	3579	11	FSM	ENSMUSG00000024222.18	ENSMUST00000079413.11	3543	11	-26	-10	-26	10	multi-exon	FALSE	canonical	2	296	junction_7	83.3980815127063	268	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCTTTTTGTTTTTGTT	NA	False	NA	-1	True	AATAAA	-28	NA	28705149	28618057	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28647325_28647441_28648194_28648338_28656965_28657111_28659901_28660028_28704925
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072155	chr17	+	196	1	Intergenic	novelGene_2236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTCCTCAAGTGAATAAT	NA	False	NA	NA	False	NA	NA	NA	28667992	28668188	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_28668000_28668200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072164	chr17	+	239	1	Intergenic	novelGene_2237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAAGAAAATTACTGTGC	2673	False	NA	NA	False	NA	NA	NA	28695307	28695546	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_28695300_28695500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072170	chr17	-	181	1	Intergenic	novelGene_2238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGTATTTTCAGAGTGA	NA	False	NA	NA	False	NA	NA	NA	28699971	28699790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_28699800_28700000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072175	chr17	-	2076	2	Intergenic	novelGene_2239	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCAGTGTTGTCGCTCTTTC	7618	False	NA	NA	False	NA	NA	NA	28762657	28760150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_28760443_28760873
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072178	chr17	+	190	1	Intergenic	novelGene_2240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAGTCAGAAACCAAATGAA	NA	False	NA	NA	False	NA	NA	NA	28785479	28785669	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_28785500_28785700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072188	chr17	-	2522	16	FSM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	191	1940	-31	2	multi-exon	FALSE	canonical	3	554	junction_1	86.150875406657	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTTCTATGCTCACAT	NA	False	NA	0	True	ATTAAA	-41	NA	28841492	28808561	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072192	chr17	-	2829	15	FSM	ENSMUSG00000004865.17	ENSMUST00000233440.2	4804	15	33	1942	-3	0	multi-exon	FALSE	canonical	3	554	junction_1	84.536943982848	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTCTATGCTCAC	NA	False	NA	-2	True	ATTAAA	-39	NA	28841428	28808563	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072200	chr17	+	232	1	Intergenic	novelGene_2241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGGTTTAGGAGGAGAAAA	4893	False	NA	NA	False	NA	NA	NA	28822635	28822867	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_28822600_28822900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072220	chr17	+	3463	12	FSM	ENSMUSG00000053436.16	ENSMUST00000004990.14	3562	12	98	1	-13	0	multi-exon	FALSE	canonical	3	53	junction_9	126.485422019579	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTTCTCAGGTTTATT	5162	False	NA	12	True	AATAAA	-19	NA	28910400	28967379	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_28910830_28932747_28932878_28934356_28934416_28943717_28943830_28944466_28944497_28944770_28944819_28947330_28947446_28947877_28947950_28959653_28959734_28960761_28960841_28963956_28964131_28965244
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072242	chr17	+	5638	13	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15693	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	73.5222471999689	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCGGTGCTGTTTGCTGT	NA	False	NA	9	True	AATAAA	-18	NA	29004370	29057520	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072269	chr17	-	223	1	Intergenic	novelGene_2242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATTTCTACCAAATGGAC	NA	False	NA	NA	False	NA	NA	NA	29105321	29105098	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_29105100_29105300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072273	chr17	-	186	1	Intergenic	novelGene_2243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTAAATAAAAAGATAA	5675	False	NA	NA	False	NA	NA	NA	29143307	29143121	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_29143100_29143300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072276	chr17	-	184	1	Intergenic	novelGene_2244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATTTAAAAAAAAAGCAGC	NA	False	NA	NA	False	NA	NA	NA	29149212	29149028	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_29149000_29149200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072286	chr17	+	4015	8	FSM	ENSMUSG00000005936.20	ENSMUST00000233197.2	4196	8	181	0	-13	0	multi-exon	FALSE	canonical	3	151	junction_2	164.609370626217	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTGTTATTTAATAGAA	NA	False	NA	NA	False	AATAAA	-16	NA	29171412	29188523	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_29171544_29176852_29177032_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072301	chr17	-	3355	14	FSM	ENSMUSG00000024006.18	ENSMUST00000009138.13	3351	14	-4	0	-4	0	multi-exon	FALSE	canonical	3	678	junction_3	53.1740471465247	292	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTGGATTTCTTTTAT	NA	False	NA	2	True	AATAAA	-21	NA	29226973	29189853	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072340	chr17	-	165	1	Intergenic	novelGene_2245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCATTTATTTTATTTTA	NA	False	NA	NA	False	NA	NA	NA	29215600	29215435	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_29215400_29215600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072342	chr17	+	182	1	Intergenic	novelGene_2246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATATATAATTTATTT	NA	False	NA	NA	False	NA	NA	NA	29230437	29230619	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_29230400_29230600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072352	chr17	+	248	1	Intergenic	novelGene_2247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATTACATTTACGGCAT	NA	False	NA	NA	False	NA	NA	NA	29242782	29243030	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_29242800_29243000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072361	chr17	+	2574	6	FSM	ENSMUSG00000071172.14	ENSMUST00000130216.3	2618	6	40	4	-5	-4	multi-exon	FALSE	canonical	3	1420	junction_1	257.831728070849	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGTTGGAGTATATTTT	NA	False	NA	14	True	ATTAAA	-16	NA	29251641	29262343	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29259748_29259788_29260180_29260268_29260357
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072377	chr17	+	1758	7	FSM	ENSMUSG00000071172.14	ENSMUST00000037776.16	2594	7	41	795	0	-8	multi-exon	FALSE	canonical	3	61	junction_4	890.897051042125	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAACTTGAAAGCCTGTT	NA	False	NA	29	True	ATTAAA	-20	NA	29251646	29261076	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29258427_29258884_29259748_29259788_29260180_29260268_29260357
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072379	chr17	+	3447	5	NIC	ENSMUSG00000071172.14	novel	2594	7	NA	NA	0	-13	intron_retention	FALSE	canonical	3	1420	junction_1	282.90225785596	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGTTTAACTTGAAAGC	NA	False	NA	24	True	ATTAAA	-15	NA	29251646	29261071	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_29251761_29255214_29255423_29257463_29259788_29260180_29260268_29260357
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072392	chr17	-	206	1	Intergenic	novelGene_2248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAATAAAAGACTGG	NA	False	NA	NA	False	NA	NA	NA	29265859	29265653	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_29265700_29265900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072404	chr17	+	155	1	Intergenic	novelGene_2249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTTTTTTGAGACAGG	2579	False	NA	4	True	NA	NA	NA	29271520	29271675	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_29271500_29271700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072412	chr17	+	1939	3	FSM	ENSMUSG00000023067.15	ENSMUST00000119901.9	922	3	6	-1023	6	2	multi-exon	FALSE	canonical	3	83	junction_1	538	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTCTTGTCATTAGAGC	1863	False	NA	26	True	NA	NA	NA	29309958	29319698	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_29310076_29317370_29317812_29318317
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072415	chr17	+	1917	3	FSM	ENSMUSG00000023067.15	ENSMUST00000023829.8	1913	3	1	-5	1	0	multi-exon	FALSE	canonical	3	1159	junction_2	73.5	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTGTCATTAGAGCAAA	4648	False	NA	29	True	NA	NA	NA	29312743	29319701	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_29312836_29317370_29317812_29318317
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072424	chr17	+	2416	2	ISM	ENSMUSG00000023067.15	ENSMUST00000023829.8	1913	3	3	0	3	0	intron_retention	FALSE	canonical	3	1306	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTCTTGTCATTAGA	4650	False	NA	24	True	NA	NA	NA	29312745	29319696	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr17_+_29312836_29317370
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072441	chr17	+	187	1	Intergenic	novelGene_2250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTACACCGTAGCTGTCT	5013	False	NA	NA	False	NA	NA	NA	29332118	29332305	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_29332100_29332300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072460	chr17	-	335	1	Intergenic	novelGene_2251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAAGTAATTTAATAGC	6114	False	NA	NA	False	NA	NA	NA	29392016	29391681	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_29391700_29392000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072467	chr17	+	190	1	Intergenic	novelGene_2252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGACAGAAGGAAGGGGA	NA	False	NA	NA	False	NA	NA	NA	29411787	29411977	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_29411800_29412000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072478	chr17	+	183	1	Intergenic	novelGene_2253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAGAATATAG	NA	False	NA	NA	False	NA	NA	NA	29415480	29415663	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_29415500_29415700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072484	chr17	-	1431	4	FSM	ENSMUSG00000024007.16	ENSMUST00000024802.10	1462	4	7	24	7	1	multi-exon	FALSE	canonical	3	1356	junction_1	125.889722464633	402	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGGTCTAGTATTGTTC	9696	False	NA	-23	True	AATAAA	-24	NA	29483153	29469800	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_29470700_29471223_29471293_29480710_29480866_29482845
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072514	chr17	+	198	1	Intergenic	novelGene_2254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAATGTAAACGAGGAAAA	353	False	NA	NA	False	NA	NA	NA	29492525	29492723	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_29492500_29492700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072520	chr17	-	1855	12	FSM	ENSMUSG00000024012.19	ENSMUST00000095427.12	1952	12	97	0	-67	0	multi-exon	FALSE	canonical	3	492	junction_4	200.604458475704	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAAGCCTCTTATTTAT	NA	False	NA	-5	True	AATAAA	-25	NA	29566811	29551045	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555140_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072522	chr17	-	1804	12	FSM	ENSMUSG00000024012.19	ENSMUST00000118366.9	1897	12	97	-4	-67	0	multi-exon	FALSE	canonical	3	643	junction_4	160.665917948029	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAAGCCTCTTATTTAT	NA	False	NA	-5	True	AATAAA	-25	NA	29566811	29551045	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555191_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072538	chr17	+	202	1	Intergenic	novelGene_2255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCCTGCCTCTGCCTCCC	NA	False	NA	NA	False	NA	NA	NA	29572940	29573142	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_29572900_29573100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072554	chr17	+	2756	6	FSM	ENSMUSG00000024014.9	ENSMUST00000024811.9	2698	6	-59	1	-59	-1	multi-exon	FALSE	canonical	3	1677	junction_4	112.874443520223	571	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGAGTTTTCCATTCAT	NA	False	NA	16	True	AATAAA	-17	NA	29709667	29715085	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_29710200_29710298_29710406_29710493_29710545_29710638_29711006_29712695_29712873_29713563
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072595	chr17	-	178	1	Intergenic	novelGene_2256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGAACAGTTCC	NA	False	NA	NA	False	NA	NA	NA	29784410	29784232	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_29784200_29784400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072604	chr17	+	200	1	Intergenic	novelGene_2257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCATTAGATAGCTGCTG	NA	False	NA	NA	False	NA	NA	NA	29793045	29793245	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_29793000_29793200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072609	chr17	-	206	1	Intergenic	novelGene_2258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTTGTGAACCACTTT	NA	False	NA	NA	False	NA	NA	NA	29827637	29827431	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_29827400_29827600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072618	chr17	+	2051	8	FSM	ENSMUSG00000090083.12	ENSMUST00000024817.15	5404	8	21	3332	-11	10	multi-exon	FALSE	canonical	3	261	junction_5	10.0387006232919	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCTTCGGTGTGTTTA	NA	False	NA	26	True	AATAAA	-25	NA	29833784	29860633	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_29834053_29840482_29840612_29845479_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29860189
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072629	chr17	+	3749	24	FSM	ENSMUSG00000024019.19	ENSMUST00000024816.13	6380	24	13	2618	-6	2	multi-exon	TRUE	canonical	3	368	junction_15	33.7979652859003	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCTCTGTGCTGGGCTG	NA	False	NA	18	True	ATTAAA	-18	NA	29879581	29922335	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072650	chr17	-	188	1	Intergenic	novelGene_2259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCAATTTAAGGGGGAGA	NA	False	NA	NA	False	NA	NA	NA	30157743	30157555	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_30157600_30157700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072659	chr17	+	187	1	Intergenic	novelGene_2260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGTAAGGTGAAATTG	4480	False	NA	NA	False	NA	NA	NA	30160444	30160631	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_30160400_30160600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072665	chr17	+	227	1	Intergenic	novelGene_2261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGTCTCGAAAGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	30196230	30196457	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_30196200_30196500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072668	chr17	+	174	1	Intergenic	novelGene_2262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAAACTGATCATT	NA	False	NA	NA	False	NA	NA	NA	30219800	30219974	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_30219800_30220000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072670	chr17	+	2738	6	FSM	ENSMUSG00000044477.13	ENSMUST00000226208.3	3039	6	299	2	-16	0	multi-exon	FALSE	canonical	3	90	junction_1	13.1301180497359	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGATTGTCTGTGTTG	NA	False	NA	5	True	ATTAAA	-14	NA	30224005	30428994	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_30224283_30279783_30279825_30354296_30354480_30372276_30372343_30411536_30411705_30426991
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072680	chr17	-	185	1	Intergenic	novelGene_2263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTAAATCAAAGCA	NA	False	NA	NA	False	NA	NA	NA	30245545	30245360	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_30245400_30245500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072694	chr17	+	171	1	FSM	ENSMUSG00000117725.2	ENSMUST00000235695.2	6295	1	6114	10	5946	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATATAATCTGATTATG	718	False	NA	NA	False	NA	NA	NA	30801387	30801558	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_30801400_30801600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072699	chr17	-	3557	6	FSM	ENSMUSG00000024026.14	ENSMUST00000236335.2	9865	6	-3	6311	-3	1614	multi-exon	FALSE	canonical	3	2881	junction_3	241.0424029087	2018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGAGTCATGAGGCTGG	NA	False	NA	-6	True	NA	NA	NA	30831636	30810220	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072709	chr17	-	873	7	FSM	ENSMUSG00000024026.14	ENSMUST00000167624.2	895	7	27	-5	-20	0	multi-exon	FALSE	canonical	3	704	junction_1	947.318613537998	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGGGCAGCAAGTCCCT	NA	False	NA	-12	True	AATAAA	-24	NA	30831606	30811834	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_30812049_30813088_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072721	chr17	+	348	1	Antisense	novelGene_ENSMUSG00000024026.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGTTCTGGATAATGTAT	NA	False	NA	NA	False	NA	NA	NA	30815477	30815825	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr17_+_30815500_30815800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072739	chr17	+	224	1	Intergenic	novelGene_2264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATAACCAACTTCTCAAG	NA	False	NA	NA	False	NA	NA	NA	31233299	31233523	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_31233300_31233500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072746	chr17	+	3615	15	FSM	ENSMUSG00000024030.8	ENSMUST00000024829.8	5832	15	6	2211	6	1289	multi-exon	FALSE	canonical	3	27	junction_11	5.07947048501744	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTCATTTAATTTCAAG	NA	False	NA	NA	False	ATTAAA	-18	NA	31276666	31334751	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_31276831_31283358_31283603_31311282_31311401_31313619_31313753_31317226_31317278_31323010_31323157_31324490_31324615_31325033_31325149_31327279_31327429_31327588_31327691_31328456_31328626_31329930_31330032_31330194_31330354_31331902_31332022_31333030
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072756	chr17	+	176	1	Intergenic	novelGene_2265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCCTGTGGGCAAATCAAA	NA	False	NA	NA	False	NA	NA	NA	31339766	31339942	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_31339800_31339900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072776	chr17	+	185	1	ISM	ENSMUSG00000042345.16	ENSMUST00000236745.2	7635	14	36928	1907	9318	-1907	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACACCTTCTACAAGTC	NA	False	NA	NA	False	NA	NA	NA	31463774	31463959	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr17_+_31463800_31464000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072800	chr17	+	1919	19	FSM	ENSMUSG00000041119.13	ENSMUST00000047168.13	2089	19	19	151	19	0	multi-exon	FALSE	canonical	3	53	junction_18	8.45777456647338	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGTATTTTTTTTCT	NA	False	NA	NA	False	AATATA	-15	NA	31605202	31695133	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_31605331_31633074_31633146_31634253_31634332_31639218_31639263_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692254_31694898
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072807	chr17	-	3722	11	FSM	ENSMUSG00000024037.14	ENSMUST00000171171.9	4154	11	432	0	-10	0	multi-exon	FALSE	canonical	3	400	junction_7	39.3020355706928	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACGTTGTCTCTGTGTCTT	NA	False	NA	0	True	ATTAAA	-23	NA	31731293	31713295	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722641_31728742_31728887_31729551_31729621_31731140
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072819	chr17	+	475	3	FSM	ENSMUSG00000024038.18	ENSMUST00000064798.16	493	3	15	3	12	2	multi-exon	FALSE	canonical	3	3604	junction_2	48.5	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTATGTGGTTATTTCCC	NA	False	NA	28	True	AATAAA	-18	NA	31739103	31750302	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_31739236_31740542_31740667_31750083
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072830	chr17	+	1551	4	FSM	ENSMUSG00000024038.18	ENSMUST00000046288.16	1582	4	27	4	-5	1	multi-exon	FALSE	canonical	3	77	junction_3	1707.19269237216	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTATGTGGTTATTTCC	NA	False	NA	27	True	AATAAA	-17	NA	31739118	31750301	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_31739236_31740542_31740667_31746283_31747376_31750083
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072840	chr17	+	4209	11	FSM	ENSMUSG00000006705.14	ENSMUST00000237248.2	2014	11	-42	-2153	6	-9	multi-exon	FALSE	canonical	3	26	junction_5	40.2970222224918	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGGACGATTGATTCT	NA	False	NA	20	True	ATTAAA	-13	NA	31783738	31826658	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_31783863_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814201_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072868	chr17	-	2441	16	FSM	ENSMUSG00000024039.16	ENSMUST00000078509.12	2403	16	-36	-2	-2	1	multi-exon	FALSE	canonical	3	223	junction_1	29.2615789047686	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGTGTCGACCTTATTTC	1909	False	NA	-15	True	NA	NA	NA	31856175	31831612	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_31832268_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072881	chr17	-	232	1	Intergenic	novelGene_2266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCAGCTCCGAGGTTCTC	9145	False	NA	NA	False	NA	NA	NA	31861887	31861655	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_31861700_31861900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072892	chr17	-	842	7	NIC	ENSMUSG00000061613.14	novel	923	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	95	junction_5	2338.47820886433	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGACTTCTTGTAAC	NA	False	NA	-17	True	AATAAA	-19	NA	31877729	31866054	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31873952_31874041_31877626
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072894	chr17	-	6932	6	NIC	ENSMUSG00000061613.14	novel	923	8	NA	NA	3	0	intron_retention	FALSE	canonical	3	5958	junction_1	291.634017220214	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGACTTCTTGTAAC	NA	False	NA	-17	True	AATAAA	-19	NA	31877735	31866054	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31874041_31877626
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072899	chr17	-	4188	7	NIC	ENSMUSG00000061613.14	novel	1046	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	5175	junction_5	505.802223096033	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGACTTCTTGTAAC	NA	False	NA	-17	True	AATAAA	-19	NA	31877742	31866054	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31874041_31877626
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072901	chr17	-	922	8	FSM	ENSMUSG00000061613.14	ENSMUST00000166526.9	923	8	1	0	1	0	multi-exon	FALSE	canonical	3	1007	junction_5	2353.82216310201	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGACTTCTTGTAAC	NA	False	NA	-17	True	AATAAA	-19	NA	31877742	31866054	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31871475_31871543_31873952_31874041_31877626
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072913	chr17	-	922	8	FSM	ENSMUSG00000061613.14	ENSMUST00000014684.6	1046	8	124	0	1	0	multi-exon	FALSE	canonical	3	4626	junction_6	706.208473585007	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGACTTCTTGTAAC	NA	False	NA	-17	True	AATAAA	-19	NA	31877742	31866054	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31873952_31874041_31877626
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072916	chr17	-	965	9	FSM	ENSMUSG00000061613.14	ENSMUST00000237323.2	975	9	11	-1	-3	0	multi-exon	FALSE	canonical	3	177	junction_6	2395.95355495469	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGACTTCTTGTAAC	NA	False	NA	-17	True	AATAAA	-19	NA	31877718	31866054	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31871475_31871543_31873952_31874041_31877626
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072944	chr17	+	1179	1	Antisense	novelGene_ENSMUSG00000061613.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAAAAACCCAGCAACACA	NA	False	NA	NA	False	NA	NA	NA	31872748	31873927	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr17_+_31872700_31873900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000072973	chr17	-	1759	8	FSM	ENSMUSG00000002076.13	ENSMUST00000002145.12	2867	8	-29	1137	0	176	multi-exon	FALSE	canonical	3	776	junction_1	207.062940248828	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGTGCCTGTGCATGTG	NA	False	NA	-3	True	ATTAAA	-31	NA	32253511	32164879	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073000	chr17	+	4572	16	FSM	ENSMUSG00000058392.14	ENSMUST00000081339.13	4874	16	302	0	-1	0	multi-exon	TRUE	canonical	3	488	junction_12	76.5992747282172	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTTTGATGTTGCCTC	NA	False	NA	22	True	ATTAAA	-24	NA	32255375	32281839	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272929_32274078_32274099_32274884_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073004	chr17	+	4505	15	NIC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	3	29	junction_2	174.748332157525	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTGGTCTTTGATGTTGC	NA	False	NA	19	True	ATTAAA	-21	NA	32255381	32281836	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_32255579_32264902_32264986_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272929_32274078_32274099_32274884_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073019	chr17	+	177	1	Intergenic	novelGene_2267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAATTGGGTTTATTCC	6745	False	NA	NA	False	NA	NA	NA	32291535	32291712	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_32291500_32291700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073026	chr17	+	189	1	Intergenic	novelGene_2268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	382	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAGAAATGTTTAGCA	NA	False	NA	NA	False	AATAAA	-9	NA	32331639	32331828	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_32331600_32331800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073059	chr17	-	6090	20	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-10	0	intron_retention	FALSE	canonical	3	87	junction_19	60.2163228715122	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	32503706	32415247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32503491
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073085	chr17	+	175	1	Intergenic	novelGene_2269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCGGGCGTGGTGGCGCA	NA	False	NA	NA	False	NA	NA	NA	32466826	32467001	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_32466800_32467000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073096	chr17	-	182	1	Intergenic	novelGene_2270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGGGAAATAAGCT	NA	False	NA	NA	False	NA	NA	NA	32508332	32508150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_32508200_32508300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073104	chr17	-	241	1	Intergenic	novelGene_2271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTCATTTGATCGTTTTC	7618	False	NA	NA	False	AAAAAG	-45	NA	32516455	32516214	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_32516200_32516500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073110	chr17	-	3743	14	FSM	ENSMUSG00000024045.7	ENSMUST00000002699.7	3731	14	-10	-2	-10	2	multi-exon	TRUE	canonical	3	426	junction_6	74.0811964579343	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTCATTAATTACTG	NA	False	NA	1	True	AATAAA	-18	NA	32540169	32522643	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073118	chr17	-	4110	13	FSM	ENSMUSG00000024045.7	ENSMUST00000237103.2	4071	13	-37	-2	-3	0	multi-exon	FALSE	canonical	3	426	junction_6	76.8282265114124	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTGTTCATTAATTAC	NA	False	NA	-1	True	AATAAA	-16	NA	32540136	32522645	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073133	chr17	+	193	1	Intergenic	novelGene_2272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTCTTCTTCTTCTTCT	141	False	NA	NA	False	NA	NA	NA	32538501	32538694	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_32538500_32538700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073142	chr17	-	2001	15	FSM	ENSMUSG00000002625.11	ENSMUST00000236503.2	1987	15	-13	-1	-1	0	multi-exon	FALSE	canonical	3	144	junction_11	68.7455007804221	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569582	32540397	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557329_32557430_32557489_32557764_32557798_32564297_32564373_32569460
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073146	chr17	-	2099	14	FSM	ENSMUSG00000002625.11	ENSMUST00000050214.9	2102	14	3	0	3	0	multi-exon	TRUE	canonical	3	272	junction_6	38.0609912279546	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569578	32540397	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073170	chr17	-	3809	8	NIC	ENSMUSG00000024050.19	novel	3578	9	NA	NA	-19	8	combination_of_known_junctions	FALSE	canonical	3	128	junction_5	27.8384552703043	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGTGTGTTTTTTTCTGT	NA	False	NA	-2	True	ATTAAA	-32	NA	32583456	32573020	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916_32578469_32580434_32580939_32581766_32581938_32583155
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073171	chr17	-	4189	9	FSM	ENSMUSG00000024050.19	ENSMUST00000169488.10	3578	9	-9	-602	-9	8	multi-exon	FALSE	canonical	3	73	junction_5	52.6413276333339	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGTGTGTTTTTTTCTGT	NA	False	NA	-2	True	ATTAAA	-32	NA	32583446	32573020	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916_32578469_32579011_32579402_32580434_32580939_32581766_32581938_32583155
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073203	chr17	+	2235	13	FSM	ENSMUSG00000048440.17	ENSMUST00000003416.15	2227	13	-5	-3	-5	2	multi-exon	TRUE	canonical	3	62	junction_12	10.7625895273086	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTCTTGGTTCCATTAT	NA	False	NA	23	True	NA	NA	NA	32755537	32770774	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_32755630_32755971_32756171_32759244_32759390_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073214	chr17	+	2198	13	FSM	ENSMUSG00000048440.17	ENSMUST00000169591.8	2242	13	43	1	0	0	multi-exon	FALSE	canonical	3	41	junction_1	14.6806278249036	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCATGTCTTGGTTCCAT	NA	False	NA	20	True	NA	NA	NA	32755574	32770771	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_32755630_32755968_32756171_32759244_32759390_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073222	chr17	+	196	1	Intergenic	novelGene_2273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAGAGTGGAGA	NA	False	NA	NA	False	NA	NA	NA	32952136	32952332	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_32952100_32952300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073233	chr17	-	2545	4	FSM	ENSMUSG00000095325.4	ENSMUST00000228075.3	5337	4	16	2776	16	1867	multi-exon	FALSE	canonical	3	147	junction_3	10.4986771653491	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGTCATGGTGTCTCT	NA	False	NA	-1	True	NA	NA	NA	33110600	33100968	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_33103140_33104676_33104738_33104930_33105058_33110414
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073252	chr17	+	180	1	Intergenic	novelGene_2274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAAGAGTTGCCTTGG	NA	False	NA	NA	False	NA	NA	NA	33169510	33169690	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_33169500_33169700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073261	chr17	+	2357	4	FSM	ENSMUSG00000053600.9	ENSMUST00000039132.9	2376	4	0	19	0	-19	multi-exon	FALSE	canonical	3	72	junction_1	5.18544972870135	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAATAAATTCCTTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	33184787	33198188	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_33184904_33194887_33195015_33195200_33195259_33196132
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073270	chr17	+	182	1	Intergenic	novelGene_2275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTGGACAATGCTACA	NA	False	NA	NA	False	NA	NA	NA	33211015	33211197	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_33211000_33211200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073277	chr17	+	2797	4	FSM	ENSMUSG00000053390.17	ENSMUST00000087666.11	2950	4	-55	208	3	-208	multi-exon	FALSE	canonical	3	36	junction_3	3.55902608401044	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTGTGGAATTTGTGC	NA	False	NA	12	True	AATAAA	-19	NA	33212115	33224223	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_33212233_33220597_33220725_33220931_33220993_33221731
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073284	chr17	-	3426	4	FSM	ENSMUSG00000067430.8	ENSMUST00000087654.5	3407	4	-4	-15	-4	15	multi-exon	FALSE	canonical	3	84	junction_1	5.73488351136175	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTGTGTATGTGTTTT	2755	False	NA	-1	True	NA	NA	NA	33252380	33235821	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_33238944_33240431_33240484_33240679_33240807_33252255
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073297	chr17	-	3544	4	FSM	ENSMUSG00000094441.3	ENSMUST00000008830.10	3544	4	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_3	10.077477638554	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTGTGTTGTGGT	NA	False	NA	NA	False	ATTAAA	-16	NA	33474119	33458691	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_33461925_33462686_33462745_33462981_33463109_33473993
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073307	chr17	+	5786	4	FSM	ENSMUSG00000096910.3	ENSMUST00000099414.5	5788	4	0	2	0	-2	multi-exon	FALSE	canonical	3	48	junction_3	21.7613316585993	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTGTGTTGTGGT	NA	False	NA	14	True	ATTAAA	-16	NA	33508517	33526213	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_33508644_33519554_33519682_33519918_33519977_33520738
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073327	chr17	+	180	1	Intergenic	novelGene_2276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAATGTATTATGA	5256	False	NA	NA	False	NA	NA	NA	33815778	33815958	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_33815800_33816000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073335	chr17	+	1135	6	FSM	ENSMUSG00000073423.11	ENSMUST00000073570.12	1197	6	2	60	2	3	multi-exon	FALSE	canonical	3	354	junction_1	31.6569107779012	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTACCTATGCCTTCATC	4919	False	NA	32	True	AATACA	-22	NA	33848065	33850693	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_33848191_33848770_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073337	chr17	+	1209	7	FSM	ENSMUSG00000073423.11	ENSMUST00000166627.8	1211	7	2	0	2	0	multi-exon	FALSE	canonical	3	63	junction_2	162.952702749397	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTACCTATGCCTTC	4919	False	NA	29	True	AATACA	-19	NA	33848065	33850690	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_33848191_33848595_33848673_33848770_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073359	chr17	-	2300	15	NIC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	506.741088340234	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCCTTTTTTGTTTTTGT	5756	False	NA	-1	True	AATAAA	-20	NA	33904377	33865205	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33896247_33896415_33904240
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073372	chr17	-	2520	15	NIC	ENSMUSG00000059208.16	novel	3934	16	NA	NA	-35	0	intron_retention	FALSE	canonical	0	0	junction_12	499.910221531663	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGCCTTTTTTGTTTTTG	5705	False	NA	-2	True	AATAAA	-19	NA	33904428	33865206	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33889054_33889108_33896247_33896415_33904240
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073384	chr17	-	2302	15	NIC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	663.597631344877	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTGCCTTTTTTGTTT	5767	False	NA	-5	True	AATAAA	-16	NA	33904366	33865209	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885620_33885660_33887958_33888053_33889054_33889108_33896247_33896415_33904240
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073402	chr17	-	1402	5	FSM	ENSMUSG00000079557.12	ENSMUST00000172767.9	1398	5	-4	0	-4	0	multi-exon	FALSE	canonical	3	227	junction_1	25.5196003103497	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATGTTTCTAAGCTGTTC	2672	False	NA	-11	True	AATAAA	-33	NA	33937648	33910488	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_33911128_33915010_33915221_33921986_33922183_33928718_33928947_33937519
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073416	chr17	-	1950	5	FSM	ENSMUSG00000077450.14	ENSMUST00000057373.14	6109	5	46	4113	0	153	multi-exon	FALSE	canonical	3	562	junction_1	25.4411084664171	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTCAGCTTCTGTCTTCT	NA	False	NA	-6	True	ACTAAA	-31	NA	33979458	33965570	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968952_33979196
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073424	chr17	+	191	1	ISM	ENSMUSG00000090952.3	ENSMUST00000170103.3	925	2	1685	3	1685	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCTCTCTGATTTCATT	5162	False	NA	16	True	NA	NA	NA	33980650	33980841	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr17_+_33980600_33980800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073434	chr17	-	1871	7	FSM	ENSMUSG00000002289.17	ENSMUST00000002360.17	3308	7	287	1150	0	8	multi-exon	FALSE	canonical	3	124	junction_1	6.14862224856557	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTCTCTGTTGTTTCA	NA	False	NA	-3	True	AATAAA	-16	NA	34000517	33993873	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_33994543_33995923_33996206_33996293_33996390_33997345_33997460_33999503_33999622_33999756_33999868_34000036
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073439	chr17	-	185	1	Intergenic	novelGene_2277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAAGTTCAAAGTCTCTT	NA	False	NA	NA	False	NA	NA	NA	34014445	34014260	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_34014300_34014400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073447	chr17	+	2647	11	FSM	ENSMUSG00000042099.17	ENSMUST00000048560.11	2641	11	-4	-2	-3	2	multi-exon	FALSE	canonical	3	204	junction_2	56.7176339421877	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATTGTGTGGATGGAAGC	NA	False	NA	15	True	AATAAA	-18	NA	34029489	34041894	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_34029540_34035159_34035220_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259_34041350_34041648
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073463	chr17	+	783	6	FSM	ENSMUSG00000042099.17	ENSMUST00000173789.2	783	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	124.071592236096	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGTATTGTGTGGATGGA	NA	False	NA	12	True	AATAAA	-15	NA	34029496	34041891	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_34029540_34035159_34035220_34040742_34040889_34040979_34041181_34041259_34041350_34041648
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073477	chr17	-	333	4	FSM	ENSMUSG00000067288.14	ENSMUST00000173844.8	382	4	63	-14	-5	0	multi-exon	FALSE	canonical	3	11527	junction_1	4307.03060897722	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTCCAGCAGCGTC	NA	False	NA	-11	True	AATAAA	-28	NA	34043473	34042009	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_34042091_34042166_34042305_34043272_34043321_34043407
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073478	chr17	-	329	4	FSM	ENSMUSG00000067288.14	ENSMUST00000087342.13	392	4	63	0	-5	0	multi-exon	FALSE	canonical	3	4589	junction_1	7337.59253585413	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTCCAGCAGCGTC	NA	False	NA	-11	True	AATAAA	-28	NA	34043473	34042009	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_34042091_34042170_34042305_34043272_34043321_34043407
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073499	chr17	+	510	4	FSM	ENSMUSG00000041881.14	ENSMUST00000048249.8	528	4	17	1	-5	-1	multi-exon	FALSE	canonical	3	7458	junction_2	513.174650798558	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTTTTCTTAGTATTT	4091	False	NA	32	True	AATATA	-23	NA	34043562	34057290	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_34043655_34044574_34044625_34048640_34048791_34057072
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073512	chr17	+	4499	3	NIC	ENSMUSG00000041881.14	novel	438	3	NA	NA	-4	0	intron_retention	FALSE	canonical	3	8081	junction_1	317	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCAATCTGTCTTTTCTT	4111	False	NA	25	True	AATATA	-16	NA	34043582	34057283	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_34043655_34044574_34048791_34057072
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073520	chr17	+	426	3	FSM	ENSMUSG00000041881.14	ENSMUST00000173132.8	438	3	12	0	3	0	multi-exon	FALSE	canonical	3	616	junction_1	4049.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCAATCTGTCTTTTCTT	4118	False	NA	25	True	AATATA	-16	NA	34043589	34057283	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_34043655_34048640_34048791_34057072
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073525	chr17	+	1188	5	FSM	ENSMUSG00000002308.17	ENSMUST00000002379.15	2209	5	0	1021	0	0	multi-exon	FALSE	canonical	3	326	junction_3	13.0072095393286	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTCTAGCCTGTTT	6993	False	NA	23	True	ATTAAA	-16	NA	34062064	34067727	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_34062266_34064989_34065116_34066468_34066700_34066990_34067153_34067259
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073538	chr17	-	2345	11	FSM	ENSMUSG00000079553.12	ENSMUST00000173492.9	2357	11	10	2	10	-2	multi-exon	FALSE	canonical	1	168	junction_4	135.039586788467	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGTTTGTTTTGCTTTT	9703	False	NA	-9	True	AATAAA	-24	NA	34109625	34094634	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101422_34102072_34102853_34103562_34103961_34104141_34104193_34104822_34104877_34105549_34105650_34105737_34105876_34109451
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073544	chr17	+	877	3	NNC	ENSMUSG00000092349.2	novel	807	3	NA	NA	-11925	5	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_1	2.5	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGACTTAAATTTCTT	NA	False	NA	18	True	NA	NA	NA	34112183	34125654	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_+_34112309_34124501_34124892_34125292
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073562	chr17	+	2539	8	FSM	ENSMUSG00000002307.17	ENSMUST00000079421.15	2581	8	42	0	-11	0	multi-exon	FALSE	canonical	3	546	junction_5	66.597787546753	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCCTTTACTTTGCCT	5611	False	NA	12	True	AATAAA	-23	NA	34128460	34134564	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_34128573_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132816_34133037_34134316
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073568	chr17	+	2627	7	NIC	ENSMUSG00000002307.17	novel	2581	8	NA	NA	17	0	intron_retention	FALSE	canonical	3	546	junction_5	71.9320667173009	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCCTTTACTTTGCCT	5639	False	NA	12	True	AATAAA	-23	NA	34128488	34134564	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_34128573_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34133037_34134316
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073615	chr17	-	713	4	FSM	ENSMUSG00000024309.16	ENSMUST00000025163.14	807	4	6	88	-6	10	multi-exon	FALSE	canonical	3	1067	junction_1	64.8194072447099	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCAGTCTTTCTTCACTG	NA	False	NA	-5	True	AATAAA	-27	NA	34159311	34157882	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_34158086_34158512_34158638_34158721_34158793_34158997
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073636	chr17	+	2365	15	NNC	ENSMUSG00000024312.11	novel	2229	15	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_9	68.8412844808956	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTCTGGACCATCCTG	1996	False	NA	11	True	ATTAAA	-14	NA	34159650	34168669	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_+_34159781_34159858_34160066_34160165_34160247_34160379_34160493_34160606_34160695_34160795_34160858_34162319_34162425_34162531_34162683_34162774_34162911_34163300_34163556_34167193_34167508_34167616_34167712_34167809_34167906_34168046_34168161_34168251
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073649	chr17	-	577	5	FSM	ENSMUSG00000008668.16	ENSMUST00000008812.9	560	5	-16	-1	-16	1	multi-exon	FALSE	canonical	3	20050	junction_4	1387.25833481007	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTCTCAGTTTGTCTTC	NA	False	NA	NA	False	AATAAA	-20	NA	34174667	34170971	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_34171093_34171194_34171287_34171376_34171566_34174051_34174151_34174591
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073656	chr17	-	548	5	NNC	ENSMUSG00000008668.16	novel	715	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9338.29794448646	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGTCTCAGTTTGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	34174637	34170972	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_-_34171093_34171194_34171287_34171374_34171566_34174051_34174151_34174591
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073658	chr17	-	953	4	FSM	ENSMUSG00000008668.16	ENSMUST00000174620.3	974	4	24	-3	24	0	multi-exon	FALSE	canonical	3	21077	junction_1	1022.38979302851	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGTCTCAGTTTGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	34174603	34170972	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_34171093_34171194_34171287_34171376_34171566_34174051
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073662	chr17	-	527	5	FSM	ENSMUSG00000008668.16	ENSMUST00000174609.9	527	5	0	0	0	0	multi-exon	FALSE	canonical	3	518	junction_2	9115.60860557319	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGTCTCAGTTTGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	34174637	34170972	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_34171093_34171194_34171268_34171376_34171566_34174051_34174151_34174591
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073678	chr17	-	3665	1	NIC	ENSMUSG00000008668.16	novel	527	5	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGTCTCAGTTTGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	34174637	34170972	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_34171000_34174600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073692	chr17	+	180	1	Intergenic	novelGene_2278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATAAAAAAGGCCCT	630	False	NA	NA	False	NA	NA	NA	34212613	34212793	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_34212600_34212800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073698	chr17	-	1594	8	FSM	ENSMUSG00000061232.17	ENSMUST00000025181.18	1619	8	63	-38	-1	2	multi-exon	FALSE	canonical	3	30	junction_6	28.3196045170126	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGCTGTGTGTATCTGTT	NA	False	NA	-2	True	AATAAA	-34	NA	34219258	34214988	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_34215478_34215589_34215629_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218521_34218707_34218978_34219167
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073705	chr17	-	1547	8	FSM	ENSMUSG00000061232.17	ENSMUST00000172912.8	1570	8	13	10	5	-3	multi-exon	FALSE	canonical	3	30	junction_6	28.0698836361489	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGGGTCACTATGCTG	NA	False	NA	-14	True	AATAAA	-22	NA	34219250	34215000	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_34215451_34215589_34215629_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218521_34218707_34218978_34219167
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073710	chr17	-	1721	7	FSM	ENSMUSG00000024325.9	ENSMUST00000025183.9	2034	7	21	292	-7	0	multi-exon	FALSE	canonical	3	63	junction_3	8.5764535535124	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGTTCTCTGTGTGTG	NA	False	NA	2	True	NA	NA	NA	34243633	34240057	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_34240458_34240656_34240931_34241269_34241660_34241952_34242169_34242266_34242428_34243262_34243393_34243483
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073723	chr17	-	1230	7	ISM	ENSMUSG00000073422.12	ENSMUST00000045467.14	965	9	-4	0	0	0	intron_retention	FALSE	canonical	3	139	junction_4	22.7406879598857	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTTCTTCTTGTGTC	NA	False	NA	-1	True	AATAAA	-23	NA	34247034	34245006	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073724	chr17	-	1130	8	ISM	ENSMUSG00000073422.12	ENSMUST00000045467.14	965	9	-4	0	0	0	intron_retention	FALSE	canonical	3	114	junction_7	29.9400762067385	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTTCTTCTTGTGTC	NA	False	NA	-1	True	AATAAA	-23	NA	34247034	34245006	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379_34246497_34246596
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073729	chr17	-	969	9	FSM	ENSMUSG00000073422.12	ENSMUST00000045467.14	965	9	-4	0	0	0	multi-exon	FALSE	canonical	3	92	junction_8	37.2237743250198	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTTCTTCTTGTGTC	NA	False	NA	-1	True	AATAAA	-23	NA	34247034	34245006	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379_34246497_34246596_34246815_34246975
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073738	chr17	-	2754	7	FSM	ENSMUSG00000024327.17	ENSMUST00000025186.16	2320	7	-434	0	-372	0	multi-exon	FALSE	canonical	3	543	junction_6	39.6512575112344	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTTGTCTTTATGTG	NA	False	NA	-2	True	AATAAA	-26	NA	34251028	34247242	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34249797
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073742	chr17	-	2483	6	FSM	ENSMUSG00000024327.17	ENSMUST00000170491.8	2433	6	-47	-3	-13	-1	multi-exon	FALSE	canonical	3	568	junction_4	31.8282893036996	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCTTTGTCTTTATGT	NA	False	NA	-3	True	AATAAA	-25	NA	34250669	34247243	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073757	chr17	-	2085	8	FSM	ENSMUSG00000024327.17	ENSMUST00000169397.9	1550	8	-11	-524	9	1	multi-exon	FALSE	canonical	3	49	junction_7	197.419371296905	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGCCTTTGTCTTTAT	NA	False	NA	-5	True	AATAAA	-23	NA	34250647	34247245	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34249797_34250237_34250521
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073771	chr17	+	2636	10	FSM	ENSMUSG00000039656.18	ENSMUST00000174299.9	2577	10	-59	0	-19	0	multi-exon	FALSE	canonical	3	122	junction_7	37.5838157971825	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTTCTGGACTGAGAT	NA	False	NA	21	True	CATAAA	-21	NA	34250766	34257373	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_34251198_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255846_34255939_34256140_34256247_34256357
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073779	chr17	+	2643	10	FSM	ENSMUSG00000039656.18	ENSMUST00000044858.16	2627	10	-14	-2	-14	0	multi-exon	FALSE	canonical	3	65	junction_7	51.2967642711639	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTTCTGGACTGAGAT	NA	False	NA	21	True	CATAAA	-21	NA	34250771	34257373	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_34251198_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255834_34255939_34256140_34256247_34256357
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073829	chr17	+	1200	6	FSM	ENSMUSG00000060586.12	ENSMUST00000235530.2	1669	6	-5	474	-5	1	multi-exon	FALSE	canonical	3	177	junction_2	11.7064085013295	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTTCATAGAGTTTCAA	NA	False	NA	13	True	AATAAA	-17	NA	34524835	34535174	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_34525022_34528564_34528835_34533143_34533426_34534016_34534128_34534529_34534554_34534847
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073840	chr17	+	6550	30	FSM	ENSMUSG00000015468.15	ENSMUST00000015612.14	6591	30	41	0	11	0	multi-exon	TRUE	canonical	3	55	junction_11	11.3350235386032	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCTGAGGGACTAAAGGG	NA	False	NA	14	True	AATAAA	-23	NA	34783282	34807477	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_34783484_34784274_34784357_34784446_34784743_34786315_34786664_34787137_34787261_34787366_34787604_34787690_34787847_34789008_34789204_34790710_34790825_34791469_34791584_34791651_34791775_34792722_34792883_34794036_34794183_34794380_34794534_34795382_34795501_34795742_34795831_34796391_34796543_34796921_34797107_34799893_34800147_34800352_34800466_34801372_34801897_34802323_34802708_34802802_34802979_34803385_34803606_34803754_34803825_34803964_34804104_34804878_34805184_34805500_34805649_34806090_34806189_34806347
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073850	chr17	-	1240	6	FSM	ENSMUSG00000015478.14	ENSMUST00000015622.8	1238	6	0	-2	0	2	multi-exon	FALSE	canonical	3	1022	junction_5	40.2124358874217	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCCCCAGTCTCTCCCTC	795	False	NA	-21	True	NA	NA	NA	34822664	34820062	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_34820641_34820714_34820833_34820907_34820963_34821058_34821172_34821264_34821284_34822307
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073861	chr17	-	1277	4	FSM	ENSMUSG00000015478.14	ENSMUST00000174475.8	850	4	-214	-213	71	-10	multi-exon	FALSE	canonical	3	1022	junction_3	37.7211994624891	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCTGGGAAGTCTCCCC	895	False	NA	-33	True	NA	NA	NA	34822564	34820074	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_34820963_34821058_34821172_34821264_34821284_34822307
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073887	chr17	+	2562	18	FSM	ENSMUSG00000015461.16	ENSMUST00000015605.15	2566	18	4	0	4	0	multi-exon	FALSE	canonical	3	325	junction_9	22.8588265568706	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCGGCCACCTTCCTAGTG	9745	False	NA	11	True	AATAAA	-24	NA	34866123	34874048	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870094_34870535_34870722_34870803_34870896_34871621_34871802_34871962_34872071_34872187_34872270_34872475_34872547_34872677_34872790_34872894_34872980_34873444
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073898	chr17	+	2490	18	NNC	ENSMUSG00000015461.16	novel	2566	18	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_14	85.6016767290427	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCGGCCACCTTCCTAGTG	9814	False	NA	11	True	AATAAA	-24	NA	34866192	34874048	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_+_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870094_34870535_34870722_34870803_34870896_34871621_34871802_34871962_34872071_34872187_34872270_34872478_34872547_34872677_34872790_34872894_34872980_34873444
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073902	chr17	-	1106	7	FSM	ENSMUSG00000061207.12	ENSMUST00000077477.12	1120	7	14	0	-4	0	multi-exon	FALSE	canonical	3	81	junction_1	4.59770474137791	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTCTGTGTCCTTTGT	5587	False	NA	-4	True	AATAAA	-16	NA	35055907	35042968	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_35043301_35043489_35043638_35043726_35043825_35050988_35051129_35051421_35051518_35055405_35055543_35055752
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073910	chr17	+	1447	7	FSM	ENSMUSG00000040482.17	ENSMUST00000180043.8	1447	7	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	19.7434940057619	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGCTGTGTCTGAATG	2976	False	NA	30	True	AATAAA	-19	NA	35055994	35058162	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_35056193_35056368_35056731_35056876_35057113_35057201_35057422_35057523_35057660_35057788_35057884_35057962
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073963	chr17	+	3881	28	FSM	ENSMUSG00000013787.16	ENSMUST00000114033.9	3882	28	1	0	1	0	multi-exon	TRUE	canonical	3	141	junction_1	79.9703820344975	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	6671	False	NA	19	True	AATAAA	-20	NA	35117445	35133027	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073967	chr17	+	3775	27	FSM	ENSMUSG00000013787.16	ENSMUST00000078061.13	3746	27	-25	-4	5	0	multi-exon	FALSE	canonical	3	123	junction_9	83.6524314646073	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	6675	False	NA	19	True	AATAAA	-20	NA	35117449	35133027	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073968	chr17	+	3903	28	NIC	ENSMUSG00000013787.16	novel	3882	28	NA	NA	5	0	combination_of_known_junctions	TRUE	canonical	3	35	junction_14	98.9641965990974	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTGTCTGGTGATTGTT	6675	False	NA	15	True	AATAAA	-16	NA	35117449	35133023	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125928_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000073988	chr17	+	4043	27	FSM	ENSMUSG00000013787.16	ENSMUST00000013931.12	4026	27	-17	0	0	0	multi-exon	FALSE	canonical	3	188	junction_9	70.6987525311972	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	7155	False	NA	19	True	AATAAA	-20	NA	35117929	35133027	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074014	chr17	+	192	1	Intergenic	novelGene_2279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTTAAAAAAAAGGTTTTC	1661	False	NA	NA	False	NA	NA	NA	35143966	35144158	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_35144000_35144200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074035	chr17	+	200	1	Intergenic	novelGene_2280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGACAGAATGGTCAAAA	NA	False	NA	NA	False	NA	NA	NA	35157914	35158114	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_35157900_35158100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074045	chr17	+	220	1	Intergenic	novelGene_2281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTGGTTT	9061	False	NA	NA	False	AAGAAA	-23	NA	35168132	35168352	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_35168100_35168400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074055	chr17	-	582	5	FSM	ENSMUSG00000092203.8	ENSMUST00000172501.8	579	5	-1	-2	-1	0	multi-exon	FALSE	canonical	3	94	junction_4	37.0497975702972	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAATAGACTTTTTCTGT	6009	False	NA	NA	False	AATAAA	-16	NA	35171445	35169216	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_35169452_35169673_35169824_35170860_35170902_35171111_35171150_35171327
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074061	chr17	-	2805	1	FSM	ENSMUSG00000090877.4	ENSMUST00000172753.2	2803	1	3	-5	3	5	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTCTGTTTGTATGT	8774	False	NA	NA	False	AATAAA	-13	NA	35178211	35175406	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_35175400_35178200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074071	chr17	+	869	5	FSM	ENSMUSG00000007050.18	ENSMUST00000114011.11	840	5	-29	0	-11	0	multi-exon	FALSE	canonical	3	1192	junction_1	217.150869213089	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGGTTTGTCGTCTGCT	72	False	NA	26	True	AATAAA	-20	NA	35200826	35204867	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_35201062_35201595_35201664_35204084_35204116_35204224_35204285_35204392
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074080	chr17	+	888	5	FSM	ENSMUSG00000007050.18	ENSMUST00000007266.14	873	5	-15	0	-7	0	multi-exon	FALSE	canonical	3	278	junction_1	596.250995806296	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGGTTTGTCGTCTGCT	228	False	NA	26	True	AATAAA	-20	NA	35201089	35204867	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_35201344_35201595_35201664_35204084_35204116_35204224_35204285_35204392
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074087	chr17	-	177	1	Intergenic	novelGene_2282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGCTAAAGCTGAAAAGGT	NA	False	NA	NA	False	NA	NA	NA	35208631	35208454	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_35208500_35208600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074089	chr17	+	178	1	Intergenic	novelGene_2283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTAAAAAGGGATTT	6249	False	NA	NA	False	NA	NA	NA	35208937	35209115	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_35208900_35209100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074097	chr17	-	3161	2	Intergenic	novelGene_2285	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTCTGTTTCTTTTATC	NA	False	NA	-17	True	NA	NA	NA	35219766	35215700	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_35218446_35219350
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074099	chr17	-	2942	2	Intergenic	novelGene_2284	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	307	junction_1	0	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTCTGTTTCTTTTATC	264	False	NA	-17	True	NA	NA	NA	35219339	35215700	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_35218446_35219142
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074117	chr17	+	4306	29	FSM	ENSMUSG00000007029.17	ENSMUST00000173584.8	4048	29	38	-296	38	4	multi-exon	TRUE	canonical	0	0	junction_12	416.176527192145	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9576	False	NA	14	True	AATAAA	-15	NA	35220064	35235302	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074137	chr17	+	4019	29	ISM	ENSMUSG00000007029.17	ENSMUST00000087315.14	4137	30	303	-6	-27	6	3prime_fragment	FALSE	canonical	0	0	junction_11	424.60875598987	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCTTGTCTGTGTGGTGT	9777	False	NA	16	True	AATAAA	-17	NA	35220265	35235304	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr17_+_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074144	chr17	+	185	1	Intergenic	novelGene_2286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGACAGATATTATATTACA	2504	False	NA	NA	False	NA	NA	NA	35222810	35222995	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_35222800_35223000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074147	chr17	+	1207	6	FSM	ENSMUSG00000007041.10	ENSMUST00000007257.10	1466	6	237	22	237	-22	multi-exon	TRUE	canonical	3	1084	junction_1	70.1524055182714	223	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGTGTTGTTTTTACACA	1913	False	NA	NA	False	AATAAA	-19	NA	35269178	35277703	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_35269463_35271410_35271521_35271756_35271883_35272008_35272116_35274202_35274385_35277305
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074161	chr17	+	1324	7	FSM	ENSMUSG00000007039.13	ENSMUST00000007255.13	1342	7	23	-5	23	1	multi-exon	FALSE	canonical	3	393	junction_1	36.6488593122472	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGACTGGTTTCTCGA	NA	False	NA	18	True	AATAAA	-24	NA	35278033	35281072	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_35278249_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280602_35280766
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074173	chr17	+	1052	4	NIC	ENSMUSG00000013766.12	novel	750	4	NA	NA	-49	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	215.629826838084	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGAGAGCTGTCTGTGA	NA	False	NA	21	True	NA	NA	NA	35295828	35297781	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_35295936_35296110_35296183_35296812_35296939_35297034
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074191	chr17	+	191	1	Intergenic	novelGene_2287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGACCACTGACAAGCAC	NA	False	NA	NA	False	NA	NA	NA	35306535	35306726	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_35306500_35306700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074198	chr17	+	1999	20	FSM	ENSMUSG00000007036.16	ENSMUST00000007251.14	1945	20	-52	-2	-24	2	multi-exon	FALSE	canonical	3	106	junction_5	22.1293102285439	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGCTTATGAGATGTTC	NA	False	NA	34	True	AATAAA	-21	NA	35308214	35321965	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_35308433_35309344_35309402_35309997_35310065_35310546_35310634_35313226_35313313_35315279_35315354_35315457_35315581_35317669_35317785_35317874_35317977_35319310_35319375_35319614_35319665_35319937_35320062_35320217_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074211	chr17	-	947	7	FSM	ENSMUSG00000024387.14	ENSMUST00000025246.13	961	7	17	-3	17	1	multi-exon	TRUE	canonical	3	826	junction_1	47.9780042195264	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTCCTACTGTGTGTT	NA	False	NA	-6	True	AATAAA	-18	NA	35340245	35335170	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_35335402_35336671_35336862_35336971_35337048_35337434_35337551_35338729_35338833_35339420_35339504_35340097
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074219	chr17	+	201	1	Intergenic	novelGene_2288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCCTGTGCCTCTCACA	NA	False	NA	NA	False	NA	NA	NA	35335788	35335989	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_35335800_35336000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074229	chr17	+	1231	3	NIC	ENSMUSG00000092417.4	novel	1518	3	NA	NA	40	1	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	24	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTACTTTCTTGAAT	4629	False	NA	15	True	AATAAA	-15	NA	35340498	35343791	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_35340527_35342028_35342636_35343195
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074241	chr17	+	3937	26	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	434	junction_1	113.385261828864	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCGAGTACCTTTTCTTT	8513	False	NA	31	True	AATAAA	-32	NA	35354178	35366297	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074254	chr17	+	3827	25	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	186	junction_11	147.653539437202	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCGAGTACCTTTTCTTT	8515	False	NA	31	True	AATAAA	-32	NA	35354180	35366297	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074256	chr17	+	3830	25	FSM	ENSMUSG00000024392.18	ENSMUST00000025250.14	3858	25	27	1	0	1	multi-exon	FALSE	canonical	3	186	junction_11	162.018431736091	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCGAGTACCTTTTCTTT	8515	False	NA	31	True	AATAAA	-32	NA	35354180	35366297	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074302	chr17	+	3817	26	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	346	junction_1	122.303229720233	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCGAGTACCTTTTCTTT	8790	False	NA	31	True	AATAAA	-32	NA	35354455	35366297	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074356	chr17	+	185	1	Intergenic	novelGene_2289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGTTTAAGTCACTGTGT	254	False	NA	NA	False	NA	NA	NA	35400937	35401122	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_35400900_35401100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074374	chr17	+	1733	11	FSM	ENSMUSG00000019432.16	ENSMUST00000068056.12	1739	11	-10	16	-10	11	multi-exon	FALSE	canonical	3	2129	junction_1	149.184985839729	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTGTCTGTAAGTGC	NA	False	NA	21	True	AATGAA	-10	NA	35460711	35472667	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074384	chr17	+	3875	10	NIC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	-7	11	intron_retention	FALSE	canonical	3	2129	junction_1	153.609975884895	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTGTCTGTAAGTGC	NA	False	NA	21	True	AATGAA	-10	NA	35460746	35472667	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074401	chr17	+	1591	8	FSM	ENSMUSG00000073411.13	ENSMUST00000172785.8	2102	8	368	143	2	3	multi-exon	FALSE	canonical	3	37	junction_3	6.54341856605645	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAAGTGACCTTGATTG	2087	False	NA	NA	False	NA	NA	NA	35482073	35486332	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_35482163_35482354_35482625_35482814_35483091_35484759_35485036_35485162_35485280_35485457_35485491_35485663_35485703_35485841
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074407	chr17	+	194	1	Intergenic	novelGene_2290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCACAGCCATCTTAGCTT	NA	False	NA	NA	False	NA	NA	NA	35635651	35635845	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_35635700_35635800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074410	chr17	+	194	1	Intergenic	novelGene_2291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCACAGCCATCTTAGCTT	NA	False	NA	NA	False	NA	NA	NA	35680857	35681051	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_35680900_35681100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074418	chr17	-	192	1	Intergenic	novelGene_2292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	314	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAGATTCACAGA	NA	False	NA	NA	False	NA	NA	NA	35798639	35798447	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_35798400_35798600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074427	chr17	-	176	1	Intergenic	novelGene_2293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	266	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTTAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35800528	35800352	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_35800400_35800500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074433	chr17	-	221	1	Intergenic	novelGene_2294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGGATCAGGGGAGGGG	NA	False	NA	NA	False	NA	NA	NA	35807371	35807150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_35807200_35807400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074456	chr17	+	238	1	Intergenic	novelGene_2295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTATTTGAGCTGTCTT	1191	False	NA	NA	False	NA	NA	NA	35822875	35823113	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_35822900_35823100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074488	chr17	+	186	1	Intergenic	novelGene_2296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATATCTAATTAGTATTTT	4462	False	NA	15	True	NA	NA	NA	35846347	35846533	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_35846300_35846500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074499	chr17	+	181	1	Intergenic	novelGene_2297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAATCACAGCTAGGCA	3044	False	NA	NA	False	NA	NA	NA	35891176	35891357	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_35891200_35891400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074506	chr17	-	175	1	Intergenic	novelGene_2298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTTTATCAGATAAACT	869	False	NA	NA	False	NA	NA	NA	35935099	35934924	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_35934900_35935100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074516	chr17	-	182	1	Intergenic	novelGene_2299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATTAACTGTAGAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	35940635	35940453	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_35940500_35940600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074524	chr17	+	185	1	Intergenic	novelGene_2300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATATGGTCGAATCCAGG	NA	False	NA	NA	False	NA	NA	NA	35959628	35959813	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_35959600_35959800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074537	chr17	-	1657	14	FSM	ENSMUSG00000001524.15	ENSMUST00000001565.15	1679	14	24	-2	-12	2	multi-exon	FALSE	canonical	3	142	junction_8	17.8418429806661	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGCTTCAGACGTCTGCC	NA	False	NA	1	True	AATAAA	-19	NA	35984607	35978619	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_35978895_35979319_35979399_35979501_35979550_35980200_35980332_35980520_35980654_35980839_35980924_35981081_35981151_35981256_35981369_35981548_35981638_35981757_35981855_35982117_35982250_35982884_35982990_35983577_35983721_35984447
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074565	chr17	-	215	1	Intergenic	novelGene_2301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGGATGCAAGTTTGATT	6262	False	NA	NA	False	NA	NA	NA	36105423	36105208	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_36105200_36105400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074569	chr17	+	1722	13	FSM	ENSMUSG00000059714.14	ENSMUST00000001569.15	1825	13	103	0	-14	0	multi-exon	FALSE	canonical	3	176	junction_8	11.7434970184448	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATACTTCTTTCCTCACT	NA	False	NA	25	True	ATTAAA	-23	NA	36134224	36143683	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_36134394_36134698_36134756_36135018_36135095_36135170_36135262_36135457_36135602_36135724_36135845_36136322_36136419_36136629_36136783_36140734_36140917_36141010_36141057_36141545_36141684_36141834_36142000_36143398
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074579	chr17	-	2657	4	FSM	ENSMUSG00000001525.11	ENSMUST00000001566.10	2649	4	0	-8	0	8	multi-exon	FALSE	canonical	3	8733	junction_1	667.796376150695	5355	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGTGCTCATTCAGGG	NA	False	NA	1	True	AATAAA	-24	NA	36149198	36144804	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_36146932_36147054_36147166_36147519_36147629_36148888
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074614	chr17	+	1457	4	FSM	ENSMUSG00000059791.15	ENSMUST00000074259.15	1466	4	9	0	9	0	multi-exon	FALSE	canonical	3	236	junction_1	13.2748718344933	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTTGTCTGTCCATGAC	4598	False	NA	24	True	AATAAA	-18	NA	36172218	36176294	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_36172410_36174330_36174528_36175003_36175181_36175402
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074621	chr17	+	3991	3	FSM	ENSMUSG00000034595.18	ENSMUST00000187690.7	3185	3	-806	0	184	0	multi-exon	FALSE	canonical	3	80	junction_1	4	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGCCTTCCTTTGTTTC	9080	False	NA	15	True	AATAAA	-22	NA	36176700	36186488	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_36179678_36184617_36184832_36185688
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074636	chr17	+	3394	20	FSM	ENSMUSG00000024422.15	ENSMUST00000025292.15	3351	20	-43	0	-43	0	multi-exon	TRUE	canonical	3	278	junction_2	372.558080768229	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTTATGTCATTGCTT	NA	False	NA	52	True	AATGAA	-42	NA	36190667	36203562	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198290_36198432_36198726_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36201806_36201981_36203310
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074644	chr17	-	160	1	Intergenic	novelGene_2302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCACTAAGAATAGATAATG	NA	False	NA	NA	False	NA	NA	NA	36195309	36195149	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_36195100_36195300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074698	chr17	-	1092	7	FSM	ENSMUSG00000024436.17	ENSMUST00000025305.16	1079	7	-13	0	-13	0	multi-exon	FALSE	canonical	3	1264	junction_4	57.4071714451542	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACTCCCTTTGGGCTGT	4283	False	NA	-6	True	AATAAA	-21	NA	36227294	36221270	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_36221849_36222310_36222371_36223229_36223297_36225225_36225295_36225383_36225482_36225587_36225697_36227183
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074709	chr17	+	4245	20	NIC	ENSMUSG00000039220.17	novel	4222	19	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	16.24875874228	180	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGTATGTTTCACTTC	NA	False	NA	28	True	AATAAA	-28	NA	36227874	36243175	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_36227898_36228089_36228609_36234199_36234318_36234928_36235016_36235136_36235273_36235749_36235802_36237093_36237172_36237291_36237466_36237663_36237770_36237865_36237979_36238801_36238903_36239073_36239222_36239294_36239454_36239543_36239791_36240112_36240177_36240283_36240479_36240664_36240741_36240942_36241057_36241183_36241784_36242040
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074722	chr17	+	182	1	Intergenic	novelGene_2303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATGAACTTATGAATCA	NA	False	NA	NA	False	NA	NA	NA	36266212	36266394	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_36266200_36266400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074731	chr17	-	3269	22	NIC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	-19	5	intron_retention	FALSE	canonical	3	801	junction_12	69.407338839688	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGGGGTGCTTCCTG	NA	False	NA	-7	True	AATAAA	-23	NA	36280672	36267705	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074739	chr17	-	3167	23	NNC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	-9	3	at_least_one_novel_splicesite	TRUE	canonical	3	37	junction_20	195.081377383011	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCCTGTGGGGTGCTTCC	NA	False	NA	-9	True	AATAAA	-21	NA	36280662	36267707	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274933_36275145_36275233_36275968_36276016_36280537
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074786	chr17	+	195	1	Intergenic	novelGene_2304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGAATTTGGGGCTGGA	NA	False	NA	NA	False	NA	NA	NA	36347650	36347845	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_36347600_36347800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074788	chr17	-	1243	6	FSM	ENSMUSG00000073406.11	ENSMUST00000173080.10	1138	6	-26	-79	-26	5	multi-exon	FALSE	canonical	3	116	junction_4	160.992670640623	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTTTCCTGCATTGAGC	NA	False	NA	0	True	AATAAA	-27	NA	36395141	36391001	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394124_36394401_36394587_36394858_36395051
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074790	chr17	-	934	5	FSM	ENSMUSG00000073406.11	ENSMUST00000195833.6	829	5	-26	-79	-26	5	multi-exon	FALSE	canonical	3	113	junction_4	176.893329438959	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTTTCCTGCATTGAGC	NA	False	NA	0	True	AATAAA	-27	NA	36395141	36391001	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394587_36394825_36395051
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074795	chr17	-	967	5	FSM	ENSMUSG00000073406.11	ENSMUST00000194244.6	862	5	-26	-79	-26	5	multi-exon	FALSE	canonical	3	214	junction_3	129.95191418367	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTTTCCTGCATTGAGC	NA	False	NA	0	True	AATAAA	-27	NA	36395141	36391001	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394587_36394858_36395051
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074797	chr17	-	3144	4	NIC	ENSMUSG00000073406.11	novel	1064	6	NA	NA	-25	5	intron_retention	FALSE	canonical	3	343	junction_3	99.8632398165945	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTTTCCTGCATTGAGC	NA	False	NA	0	True	AATAAA	-27	NA	36395140	36391001	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_36391216_36391890_36392008_36392133_36394858_36395051
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074800	chr17	-	1210	6	FSM	ENSMUSG00000073406.11	ENSMUST00000195838.6	1105	6	-26	-79	-26	5	multi-exon	FALSE	canonical	3	113	junction_5	180.752427369593	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTTTCCTGCATTGAGC	NA	False	NA	0	True	AATAAA	-27	NA	36395141	36391001	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394124_36394401_36394587_36394825_36395051
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074833	chr17	+	187	1	Antisense	novelGene_ENSMUSG00000073403.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGCCATGATTACCATG	NA	False	NA	NA	False	NA	NA	NA	36453684	36453871	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr17_+_36453700_36453900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074842	chr17	+	180	1	Intergenic	novelGene_2305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGGAGAAGATAAAACTTAG	NA	False	NA	NA	False	NA	NA	NA	36547856	36548036	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_36547900_36548000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074845	chr17	-	221	1	Antisense	novelGene_ENSMUSG00000092392.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	AATATA	-6	NA	36564078	36563857	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr17_-_36563900_36564100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074852	chr17	-	402	4	FSM	ENSMUSG00000024446.14	ENSMUST00000077535.5	437	4	13	22	0	0	multi-exon	FALSE	canonical	3	63	junction_3	333.755399456948	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTGGTATCTCAACT	NA	False	NA	-16	True	AATAAA	-20	NA	36568735	36566558	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_36566691_36566835_36566962_36568333_36568417_36568674
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074855	chr17	-	539	5	FSM	ENSMUSG00000024446.14	ENSMUST00000025319.7	729	5	190	0	-23	0	multi-exon	FALSE	canonical	3	621	junction_3	61.4262769505038	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTGGTATCTCAACT	NA	False	NA	-16	True	AATAAA	-20	NA	36568771	36566558	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_36566691_36566835_36566962_36568333_36568417_36568497_36568599_36568674
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074892	chr17	+	3183	9	NIC	ENSMUSG00000024457.17	novel	3203	10	NA	NA	-12	0	intron_retention	FALSE	canonical	3	63	junction_5	65.2246119191215	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCTGGTGCTGTCTCTT	NA	False	NA	31	True	AATAAA	-38	NA	37148052	37170290	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_37148157_37148356_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37167093_37167117_37167547_37167664_37167880_37167914_37168291
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074914	chr17	-	173	1	Intergenic	novelGene_2306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTAAATGAGACTTAT	NA	False	NA	NA	False	NA	NA	NA	37213468	37213295	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_37213300_37213500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074920	chr17	+	188	1	Intergenic	novelGene_2307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGACGGGTTTGTAAA	NA	False	NA	NA	False	NA	NA	NA	37244392	37244580	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_37244400_37244600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074923	chr17	+	188	1	Intergenic	novelGene_2308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAGATGCTTAGGA	NA	False	NA	NA	False	NA	NA	NA	37246095	37246283	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_37246100_37246300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074935	chr17	-	641	3	FSM	ENSMUSG00000036398.14	ENSMUST00000040402.14	1599	3	29	929	29	5	multi-exon	FALSE	canonical	3	708	junction_2	5	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCCGTTCTCCTGCCCC	NA	False	NA	-10	True	AATATA	-28	NA	37262576	37260176	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_37260447_37260768_37260878_37262314
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074950	chr17	-	725	4	FSM	ENSMUSG00000036315.14	ENSMUST00000113669.9	742	4	17	0	17	0	multi-exon	FALSE	canonical	3	586	junction_1	61.9157133170212	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGATGTTATGTGTGTT	NA	False	NA	-11	True	ACTAAA	-17	NA	37269357	37265247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_37265445_37268457_37268568_37268723_37268825_37269040
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074954	chr17	+	984	3	FSM	ENSMUSG00000036214.15	ENSMUST00000040177.7	976	3	-5	-3	-5	0	multi-exon	FALSE	canonical	0	0	junction_1	121.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGCTAATGGTACCATG	NA	False	NA	20	True	AATAAA	-20	NA	37269478	37276517	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_37269595_37275248_37275325_37275725
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074974	chr17	-	1972	4	FSM	ENSMUSG00000024459.19	ENSMUST00000145260.2	2459	4	765	-278	273	278	multi-exon	FALSE	canonical	3	146	junction_1	46.3680924774785	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTTAAGTGAGACTGGAAA	NA	False	NA	-5	True	TTTAAA	-4	NA	37299664	37294674	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_37295995_37298307_37298416_37298546_37298823_37299396
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000074987	chr17	+	1700	5	NNC	ENSMUSG00000036036.16	novel	1749	5	NA	NA	-6	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1406.78256582174	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGAGGGGAGGTCAAACTG	NA	False	NA	19	True	AATAAA	-24	NA	37313410	37321507	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_+_37313632_37314177_37314208_37315688_37315796_37316941_37317087_37320310
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075006	chr17	+	1665	5	NNC	ENSMUSG00000036036.16	novel	1991	6	NA	NA	-12	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1309.76543701535	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGGAGGGGAGGTCAAA	NA	False	NA	16	True	AATAAA	-21	NA	37313433	37321504	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_+_37313632_37314177_37314208_37315688_37315796_37316950_37317087_37320310
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075008	chr17	+	1703	5	ISM	ENSMUSG00000036036.16	ENSMUST00000089968.13	1991	6	1379	20	-12	-20	3prime_fragment	FALSE	canonical	3	426	junction_1	1230.59345439507	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGGAGGGGAGGTCAAA	NA	False	NA	16	True	AATAAA	-21	NA	37313433	37321504	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr17_+_37313670_37314177_37314208_37315688_37315796_37316950_37317087_37320310
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075018	chr17	+	3689	3	FSM	ENSMUSG00000036036.16	ENSMUST00000174672.2	2597	3	-1112	20	0	-20	multi-exon	FALSE	canonical	3	2767	junction_1	286	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGGAGGGGAGGTCAAA	NA	False	NA	16	True	AATAAA	-21	NA	37313445	37321504	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_37315796_37316941_37317087_37320310
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075033	chr17	+	210	1	Intergenic	novelGene_2309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTCAGCAGGGCAGGCA	NA	False	NA	NA	False	TTTAAA	-1	NA	37338677	37338887	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_37338700_37338900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075045	chr17	-	178	1	Intergenic	novelGene_2310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGAAGGAGGAG	NA	False	NA	NA	False	NA	NA	NA	37400602	37400424	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_37400400_37400600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075052	chr17	+	3886	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	-3356	1319	-3356	-1319	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAATACAGGACTCTTTC	NA	False	NA	NA	False	NA	NA	NA	40153887	40157773	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_40153900_40157800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075059	chr17	+	202	1	Intergenic	novelGene_2311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGGTACCAGAAGTAC	NA	False	NA	NA	False	NA	NA	NA	40159786	40159988	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_40159800_40160000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075065	chr17	+	5188	1	Intergenic	novelGene_2312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTTCTCGTTGGTGATT	NA	False	NA	NA	False	NA	NA	NA	40489659	40494847	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_40489700_40494800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075085	chr17	+	3681	13	FSM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	-4	-3	-4	3	multi-exon	FALSE	canonical	3	278	junction_5	30.8112533554436	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTTGTGTGTTCCAT	NA	False	NA	NA	False	TATAAA	-26	NA	41245571	41272882	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_41245671_41247934_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075093	chr17	+	185	1	Intergenic	novelGene_2313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAACTTCAGGCTCACCC	NA	False	NA	NA	False	NA	NA	NA	41320636	41320821	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_41320600_41320800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075099	chr17	-	5667	18	FSM	ENSMUSG00000061665.8	ENSMUST00000024709.9	5364	18	-300	-3	-24	3	multi-exon	FALSE	canonical	3	147	junction_3	39.8587471351445	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTTTTTTCCTGGTT	NA	False	NA	0	True	AATAAA	-20	NA	43187580	43103838	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075113	chr17	+	186	1	Intergenic	novelGene_2314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCTAGTAGTATTAATC	NA	False	NA	NA	False	NA	NA	NA	43183656	43183842	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_43183700_43183800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075118	chr17	+	3668	6	FSM	ENSMUSG00000023915.6	ENSMUST00000024708.6	3627	6	-41	0	-41	0	multi-exon	FALSE	canonical	3	155	junction_1	28.3450171987953	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTTTTGGTATAT	NA	False	NA	21	True	AATAAA	-17	NA	43327404	43400080	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_43327984_43348485_43349138_43350585_43351081_43375858_43376125_43396226_43396456_43398633
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075127	chr17	+	3326	6	NNC	ENSMUSG00000023915.6	novel	3627	6	NA	NA	19750	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_1	56.2899635814414	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTTTTGGTATAT	NA	False	NA	21	True	AATAAA	-17	NA	43347208	43400080	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_+_43347446_43348485_43349138_43350585_43351081_43375858_43376125_43396226_43396456_43398633
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075139	chr17	+	3099	3	ISM	ENSMUSG00000023963.11	ENSMUST00000233437.2	2227	11	-166	68205	-66	-68205	5prime_fragment	FALSE	canonical	3	94	junction_2	10.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTACTCGATCAATTGTC	NA	False	NA	NA	False	NA	NA	NA	43978249	43993541	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr17_+_43978686_43987721_43987858_43991014
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075155	chr17	-	4494	4	FSM	ENSMUSG00000023961.17	ENSMUST00000143137.2	4445	4	-42	-7	3	-1	multi-exon	FALSE	canonical	2	9	junction_3	11.5854314646552	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCAGCCTTCTTAATTT	NA	False	NA	NA	False	AATAAA	-16	NA	44416697	44407199	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_44410569_44412201_44412373_44412697_44413556_44416601
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075161	chr17	-	230	1	Intergenic	novelGene_2315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTTTTGTTTTGGTTTT	NA	False	NA	NA	False	AAGAAA	-32	NA	45065573	45065343	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_45065300_45065600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075168	chr17	+	1451	12	FSM	ENSMUSG00000038954.15	ENSMUST00000050630.14	1508	12	57	0	57	0	multi-exon	FALSE	canonical	3	82	junction_7	13.7774519348892	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGAGTGGCCTGCTTTGTTT	NA	False	NA	26	True	AATAAA	-27	NA	45088095	45430177	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_45088316_45097496_45097598_45234065_45234151_45302620_45302708_45305203_45305295_45313976_45314117_45344124_45344201_45347598_45347712_45348962_45349071_45352102_45352274_45359168_45359280_45430029
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075174	chr17	+	202	1	Intergenic	novelGene_2316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGTGTGACTCAGAAG	1608	False	NA	NA	False	NA	NA	NA	45697035	45697237	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_45697000_45697200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075180	chr17	-	3027	16	FSM	ENSMUSG00000023932.10	ENSMUST00000024727.10	3027	16	1	-1	1	1	multi-exon	TRUE	canonical	3	561	junction_9	75.0022221893014	334	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAGCCTTTTGTTTGAAG	2185	False	NA	-1	True	AATAAA	-21	NA	45744662	45702808	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_45703231_45703918_45704132_45715519_45715718_45718721_45718965_45719261_45719343_45721699_45721865_45722753_45722917_45724047_45724197_45726478_45726668_45727870_45728016_45730526_45730746_45735426_45735527_45736777_45736906_45737445_45737608_45738864_45738969_45744316
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075220	chr17	+	1845	4	FSM	ENSMUSG00000037089.12	ENSMUST00000224905.2	1906	4	62	-1	-12	0	multi-exon	FALSE	canonical	3	396	junction_3	17.6823829464998	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTGGTTGGCATT	NA	False	NA	10	True	ATTAAA	-20	NA	45874861	45878597	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_45874995_45875505_45875700_45875850_45876006_45877234
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075228	chr17	-	2573	11	FSM	ENSMUSG00000023944.15	ENSMUST00000024739.14	2520	11	-49	-4	-49	4	multi-exon	TRUE	canonical	3	9221	junction_4	988.252604347694	12719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTCTCCTTGTAACACTC	NA	False	NA	-20	True	AATAAA	-23	NA	45884246	45878696	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075246	chr17	-	2521	11	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	-2	-3	intron_retention	FALSE	canonical	0	0	junction_8	3295.6876080721	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTCCTGCTCTCCTTGT	NA	False	NA	-27	True	AATAAA	-16	NA	45884199	45878703	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882336_45882546_45882690_45882838_45884092
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075265	chr17	-	1990	13	FSM	ENSMUSG00000023942.16	ENSMUST00000051574.13	1996	13	9	-3	-7	0	multi-exon	FALSE	canonical	3	154	junction_12	699.864927444337	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGCATCCTTCCAAG	NA	False	NA	-1	True	AATAAA	-18	NA	45906489	45896125	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45906407
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075268	chr17	-	2101	14	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	1453	junction_5	311.5369990469	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGCATCCTTCCAAG	NA	False	NA	-1	True	AATAAA	-18	NA	45906505	45896125	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075275	chr17	-	1991	13	FSM	ENSMUSG00000023942.16	ENSMUST00000064889.13	1988	13	0	-3	0	0	multi-exon	FALSE	canonical	3	154	junction_12	659.372555287727	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGCATCCTTCCAAG	NA	False	NA	-1	True	AATAAA	-18	NA	45906496	45896125	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45906407
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075354	chr17	+	181	1	Intergenic	novelGene_2317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTTATTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	45915524	45915705	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_45915500_45915700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075358	chr17	-	200	1	Intergenic	novelGene_2318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACCAGAGAGGTAGTCAC	NA	False	NA	NA	False	TTTAAA	-1	NA	45919172	45918972	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_45919000_45919200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075362	chr17	+	203	1	Intergenic	novelGene_2319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCCACCTCTGCCCCTTC	NA	False	NA	NA	False	NA	NA	NA	45948208	45948411	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_45948200_45948400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075402	chr17	+	241	1	Intergenic	novelGene_2320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTTTATCTTATGCAA	NA	False	NA	NA	False	AAGAAA	-5	NA	46092992	46093233	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_46093000_46093200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075405	chr17	-	328	1	Intergenic	novelGene_2321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAACTTTTGAAAAA	8683	False	NA	NA	False	NA	NA	NA	46144847	46144519	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_46144500_46144800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075413	chr17	-	5247	7	NIC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	-8	0	intron_retention	FALSE	canonical	3	122	junction_2	146.247981942392	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCCTGGTCTCTCCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	46343303	46327918	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_46329806_46331916_46332049_46333202_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075416	chr17	-	3327	6	FSM	ENSMUSG00000023951.19	ENSMUST00000024747.14	2765	6	-562	0	-8	0	multi-exon	FALSE	canonical	3	41	junction_1	191.124671353543	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCCTGGTCTCTCCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	46343303	46327918	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_46329806_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075418	chr17	-	3531	8	FSM	ENSMUSG00000023951.19	ENSMUST00000142351.9	1973	8	-8	-1550	-8	0	multi-exon	FALSE	canonical	3	122	junction_2	174.18943476478	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCCTGGTCTCTCCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	46343303	46327918	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_46329806_46331916_46332049_46333202_46333275_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075437	chr17	-	3466	7	FSM	ENSMUSG00000023951.19	ENSMUST00000071648.12	3451	7	-15	0	-15	0	multi-exon	FALSE	canonical	3	338	junction_2	72.4463402955748	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCCTGGTCTCTCCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	46343310	46327918	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075454	chr17	+	883	6	FSM	ENSMUSG00000023967.10	ENSMUST00000024763.10	884	6	2	-1	2	1	multi-exon	FALSE	canonical	3	1040	junction_5	46.4732180938656	232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGTCAGTGCTTAGAAA	NA	False	NA	20	True	AATAAA	-20	NA	46421913	46439837	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_46422056_46428865_46428898_46433649_46433758_46436215_46436340_46436568_46436639_46439430
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075469	chr17	-	1223	3	FSM	ENSMUSG00000034509.10	ENSMUST00000171172.3	1272	3	49	0	49	0	multi-exon	FALSE	canonical	3	95	junction_1	3.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTTGATTTAGACTTTT	NA	False	NA	-2	True	AATAAA	-21	NA	46464430	46458312	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_46459211_46463704_46463968_46464368
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075477	chr17	+	181	1	Intergenic	novelGene_2322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAAATTTGTATGCACTA	NA	False	NA	NA	False	NA	NA	NA	46466176	46466357	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_46466200_46466400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075483	chr17	-	3230	11	FSM	ENSMUSG00000023953.10	ENSMUST00000024749.9	3238	11	9	-1	9	1	multi-exon	TRUE	canonical	3	10	junction_7	5.44426303552648	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCTTGCATACTTTTA	7132	False	NA	-11	True	AATAAA	-16	NA	46513562	46482279	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_46484023_46486076_46486247_46492391_46492458_46493610_46493735_46495615_46495736_46498952_46499057_46501532_46501703_46505127_46505343_46509559_46509695_46510317_46510461_46513322
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075491	chr17	-	218	1	Intergenic	novelGene_2323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTCCTTGTTAATCTT	NA	False	NA	NA	False	NA	NA	NA	46496282	46496064	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_46496100_46496300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075524	chr17	-	2566	11	FSM	ENSMUSG00000012296.17	ENSMUST00000164342.10	2559	11	0	-7	0	4	multi-exon	FALSE	canonical	3	131	junction_7	88.074059745194	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTCTCCTTCCCACTT	5819	False	NA	-23	True	AATAAA	-25	NA	46593939	46568792	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46582725_46582856_46593271_46593366_46593885
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075525	chr17	-	2429	10	FSM	ENSMUSG00000012296.17	ENSMUST00000012440.14	2426	10	1	-4	1	4	multi-exon	FALSE	canonical	3	80	junction_7	101.660412679532	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTCTCCTTCCCACTT	5823	False	NA	-23	True	AATAAA	-25	NA	46593935	46568792	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575808_46575905_46593271_46593366_46593885
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075556	chr17	-	2425	10	FSM	ENSMUSG00000012296.17	ENSMUST00000225080.2	2412	10	-10	-3	1	0	multi-exon	FALSE	canonical	3	131	junction_7	91.006850915633	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTAATTTCTTTCTCCTT	5823	False	NA	-30	True	AATAAA	-18	NA	46593935	46568799	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46593271_46593366_46593885
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075557	chr17	-	2552	11	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	80	junction_7	97.6076328982524	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTAATTTCTTTCTCCTT	5823	False	NA	-30	True	AATAAA	-18	NA	46593935	46568799	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575808_46575905_46582725_46582856_46593271_46593366_46593885
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075565	chr17	-	2519	11	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_7	117.719199793407	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTAATTTCTTTCTCCTT	5823	False	NA	-30	True	AATAAA	-18	NA	46593935	46568799	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575019_46575117_46575808_46575905_46593271_46593366_46593885
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075600	chr17	-	4839	21	FSM	ENSMUSG00000032842.14	ENSMUST00000167360.8	4866	21	18	9	-8	0	multi-exon	TRUE	canonical	3	24	junction_18	9.45832966226067	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGTGTTTTAAAAAAATA	7130	False	NA	-3	True	GATAAA	-15	NA	46638931	46614155	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_46614579_46614838_46614952_46615082_46615181_46615255_46615402_46616326_46616593_46616886_46617048_46617474_46617645_46617882_46618227_46620963_46621160_46621302_46621457_46623215_46623414_46623760_46623839_46624556_46624747_46625141_46625241_46626309_46626482_46627482_46627563_46632478_46632589_46633062_46633220_46634277_46634506_46634618_46635841_46638697
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075612	chr17	+	181	1	ISM	ENSMUSG00000015597.18	ENSMUST00000113481.9	13060	10	32568	3545	6670	-3545	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTAAAACAGTTTGACC	NA	False	NA	NA	False	NA	NA	NA	46727224	46727405	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr17_+_46727200_46727400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075624	chr17	+	1143	4	FSM	ENSMUSG00000040658.8	ENSMUST00000046497.8	1190	4	49	-2	49	2	multi-exon	FALSE	canonical	3	629	junction_2	31.4960314960472	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGTCACGGTGTCTG	NA	False	NA	16	True	NA	NA	NA	46807685	46810552	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_46807899_46809350_46809420_46809568_46809680_46809802
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075633	chr17	+	186	1	Intergenic	novelGene_2324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATACTGTGCTGGCCATG	NA	False	NA	NA	False	NA	NA	NA	46846812	46846998	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_46846800_46847000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075639	chr17	-	2660	7	FSM	ENSMUSG00000015605.7	ENSMUST00000015749.7	2616	7	-39	-5	-39	5	multi-exon	FALSE	canonical	3	76	junction_2	5.5	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTAATGGCGTTTT	NA	False	NA	0	True	TATAAA	-23	NA	46867140	46859249	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_46860105_46860361_46860439_46860770_46860963_46861826_46861947_46862456_46862719_46864485_46864753_46866253
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075645	chr17	-	4278	20	FSM	ENSMUSG00000023972.11	ENSMUST00000044442.10	4235	20	-22	-21	-22	21	multi-exon	FALSE	canonical	3	399	junction_15	41.2008794247642	559	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCCTTTGTCCATGAATGG	NA	False	NA	1	True	AATAAA	-38	NA	46940452	46875375	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_46876422_46877028_46877208_46878850_46879003_46882528_46882610_46883447_46883681_46884345_46884502_46885197_46885402_46887189_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075689	chr17	+	5282	26	FSM	ENSMUSG00000038545.14	ENSMUST00000043464.14	5530	26	248	0	13	0	multi-exon	TRUE	canonical	3	53	junction_11	16.0216853046114	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTGTATGGGACTGCTA	NA	False	NA	19	True	AATAAA	-20	NA	46961510	46975290	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_46961642_46962362_46962945_46963385_46963538_46963650_46964125_46964675_46964815_46964911_46965109_46965359_46965586_46966440_46966679_46966769_46966876_46967919_46968148_46968369_46968461_46968557_46968730_46968853_46968960_46969247_46969344_46969533_46969710_46969987_46970122_46970392_46970576_46970788_46970896_46970984_46971168_46972219_46972381_46972561_46972779_46972850_46973158_46973983_46974130_46974247_46974375_46974463_46974670_46974893
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075697	chr17	-	237	1	NIC	ENSMUSG00000023971.10	novel	2274	7	NA	NA	6814	253	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTGTTTGTTGGTT	NA	False	NA	NA	False	NA	NA	NA	46978367	46978130	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_46978100_46978400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075704	chr17	-	1504	7	FSM	ENSMUSG00000023971.10	ENSMUST00000233136.2	1289	7	3	-218	3	215	multi-exon	FALSE	canonical	3	390	junction_2	28.055995596109	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTAAGGCATGCACCAG	NA	False	NA	NA	False	NA	NA	NA	46985275	46978168	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985122
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075713	chr17	-	2131	12	FSM	ENSMUSG00000063576.13	ENSMUST00000071841.7	2100	12	-31	0	-21	0	multi-exon	FALSE	canonical	3	322	junction_11	42.5343808432544	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCCTATTTCTGGCGAC	NA	False	NA	0	True	TATAAA	-17	NA	46991861	46985475	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46989967_46990121_46991627
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075722	chr17	-	1871	11	FSM	ENSMUSG00000063576.13	ENSMUST00000165007.9	1954	11	86	-3	-25	0	multi-exon	FALSE	canonical	3	47	junction_10	118.520082686438	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCCTATTTCTGGCGAC	NA	False	NA	0	True	TATAAA	-17	NA	46991754	46985475	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46991627
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075754	chr17	-	2973	15	FSM	ENSMUSG00000059409.10	ENSMUST00000002839.9	2926	15	-43	-4	-43	4	multi-exon	FALSE	canonical	3	369	junction_9	37.0099958918988	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCGCCTTGGTGTGAAA	1066	False	NA	NA	False	AATAAA	-19	NA	47015971	46993912	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075777	chr17	+	204	1	Intergenic	novelGene_2325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGTCCAAAGCCAGC	NA	False	NA	NA	False	NA	NA	NA	47003745	47003949	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_47003700_47003900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075783	chr17	+	3199	17	FSM	ENSMUSG00000002763.17	ENSMUST00000002840.9	3200	17	1	0	1	0	multi-exon	TRUE	canonical	3	74	junction_1	12.2574913318346	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTTGTGAGAGGTTGC	NA	False	NA	11	True	AATAAA	-18	NA	47022389	47036467	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_47023311_47024833_47024998_47025386_47025471_47031253_47031357_47031437_47031572_47032108_47032221_47032595_47032805_47033169_47033366_47033547_47033625_47034037_47034171_47034249_47034456_47034599_47034662_47034844_47034954_47035316_47035434_47035552_47035631_47035750_47035891_47036113
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075815	chr17	+	589	1	FSM	ENSMUSG00000062619.7	ENSMUST00000071430.7	762	1	180	-7	180	7	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCAGTCGTTTGGGTTT	NA	False	NA	17	True	GATAAA	-25	NA	47083740	47084329	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_47083700_47084300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075819	chr17	-	2636	7	FSM	ENSMUSG00000063888.8	ENSMUST00000078286.6	2606	7	-23	-7	-7	7	multi-exon	FALSE	canonical	3	1943	junction_1	138.303309994937	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTTCGCCCAGTCCCCTG	NA	False	NA	NA	False	NA	NA	NA	47093605	47084825	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075826	chr17	-	2937	4	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	2395	-186	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1070.56246898535	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTCCAAAAACACTCGAGG	NA	False	NA	NA	False	NA	NA	NA	47091168	47085018	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_-_47086663_47088972_47089198_47089335_47089446_47090210
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075837	chr17	-	2038	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	0	-589	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	847.611873966433	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCGTGTGAGTACATGCC	NA	False	NA	-1	True	AGTAAA	-18	NA	47093598	47085421	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_-_47086663_47088972_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075849	chr17	+	288	1	Intergenic	novelGene_2326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATAGTCCTAGTGGGGACT	NA	False	NA	NA	False	AATAAA	-10	NA	47094667	47094955	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_47094700_47095000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075863	chr17	-	4285	7	NNC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	-294	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_6	43.9523100138725	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCACTGTGATTGTCTT	NA	False	NA	-4	True	AATACA	-19	NA	47123405	47109045	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47123334
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075898	chr17	-	5690	47	FSM	ENSMUSG00000023977.16	ENSMUST00000113335.4	5691	47	9	-8	-3	2	multi-exon	FALSE	canonical	3	75	junction_37	17.7419541657098	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCCAGTTTTATTTTTC	NA	False	NA	-3	True	AATAAA	-18	NA	47321449	47241166	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291245_47291345_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075906	chr17	+	185	1	Intergenic	novelGene_2327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTCCTGTTGTTTATGG	2871	False	NA	NA	False	NA	NA	NA	47328486	47328671	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_47328500_47328700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075914	chr17	+	189	1	Intergenic	novelGene_2328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCCCCCCCCCTTTTTA	2223	False	NA	NA	False	NA	NA	NA	47438960	47439149	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_47439000_47439100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075926	chr17	+	1019	7	FSM	ENSMUSG00000034729.17	ENSMUST00000120737.8	1017	7	1	-3	1	1	multi-exon	FALSE	canonical	3	977	junction_2	314.646892034018	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGGTTTTGTTTACTT	7138	False	NA	8	True	NA	NA	NA	47679812	47689607	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_47679880_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075930	chr17	+	1101	8	NNC	ENSMUSG00000034729.17	novel	1017	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	735.935528453965	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGTTTTGTTTACT	7138	False	NA	7	True	NA	NA	NA	47679812	47689606	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_+_47679880_47681212_47681296_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075934	chr17	+	1023	7	FSM	ENSMUSG00000034729.17	ENSMUST00000119945.8	1018	7	-3	-2	1	2	multi-exon	FALSE	canonical	3	774	junction_2	381.394116659162	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGTTTTGTTTACTTG	7138	False	NA	9	True	NA	NA	NA	47679812	47689608	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_47679880_47683351_47683417_47683497_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075967	chr17	+	188	1	Intergenic	novelGene_2329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCATACAGAGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	47785691	47785879	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_47785700_47785900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075971	chr17	+	192	1	Antisense	novelGene_ENSMUSG00000023980.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCGCACAGAGGACACACTA	8387	False	NA	NA	False	NA	NA	NA	47794121	47794313	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr17_+_47794100_47794300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075976	chr17	-	1269	8	FSM	ENSMUSG00000023980.8	ENSMUST00000233174.2	1263	8	-4	-2	1	2	multi-exon	FALSE	canonical	3	30	junction_1	61.3926805449135	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTATTATATC	NA	False	NA	NA	False	AATAAA	-21	NA	47813216	47794286	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_47794760_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075985	chr17	-	2554	9	FSM	ENSMUSG00000023980.8	ENSMUST00000067103.4	2784	9	1	229	1	3	multi-exon	FALSE	canonical	3	80	junction_1	52.1152568831815	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGGGCCTCTCAAATGGT	NA	False	NA	-1	True	AATAAA	-34	NA	47813216	47799203	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_47800822_47801067_47801208_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000075998	chr17	-	2778	8	FSM	ENSMUSG00000023980.8	ENSMUST00000233121.2	2793	8	0	15	0	-15	multi-exon	FALSE	canonical	3	89	junction_1	41.4984632122636	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGTAAATGACTCAGACA	NA	False	NA	-19	True	AATAAA	-16	NA	47813212	47799221	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_47801208_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076005	chr17	-	1305	7	FSM	ENSMUSG00000023980.8	ENSMUST00000233274.2	1692	7	2	385	0	-385	multi-exon	FALSE	canonical	3	187	junction_3	14.5535409971442	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTACTATTCTGGTAGC	NA	False	NA	-9	True	AATAAA	-16	NA	47813212	47803973	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076012	chr17	-	187	1	Intergenic	novelGene_2330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCCCCCCCCAAAAAAGT	3631	False	NA	NA	False	NA	NA	NA	47808293	47808106	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_47808100_47808300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076015	chr17	+	186	1	Intergenic	novelGene_2331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATCTGGCGCCCTCTTCT	NA	False	NA	NA	False	NA	NA	NA	47813974	47814160	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_47814000_47814200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076028	chr17	+	2034	5	FSM	ENSMUSG00000034165.17	ENSMUST00000182209.8	1977	5	-55	-2	-21	0	multi-exon	FALSE	canonical	3	3602	junction_2	267.432701814868	1551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTTGTGATCCCTGGG	NA	False	NA	NA	False	AATAAA	-17	NA	47904339	47910616	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076040	chr17	+	1509	4	FSM	ENSMUSG00000034165.17	ENSMUST00000182539.8	931	4	17	-595	17	0	multi-exon	FALSE	canonical	3	145	junction_1	1891.51068373051	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTCTTGTGATCCCTG	NA	False	NA	NA	False	AATAAA	-15	NA	47907009	47910614	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_47907141_47908344_47908505_47908927_47909065_47909533
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076044	chr17	+	1453	4	NNC	ENSMUSG00000034165.17	novel	336	3	NA	NA	-61	0	at_least_one_novel_splicesite	FALSE	canonical	3	143	junction_1	1892.45349275014	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTCTTGTGATCCCTG	NA	False	NA	NA	False	AATAAA	-15	NA	47908027	47910614	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_+_47908103_47908344_47908505_47908927_47909065_47909533
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076059	chr17	-	3601	7	FSM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	254	-1	254	1	multi-exon	FALSE	canonical	3	435	junction_6	15.1180539605981	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTTAAGACCCCACAATCA	2595	False	NA	-5	True	AATAAA	-18	NA	47922163	47910254	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179_47915319_47917763_47917927_47921831
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076064	chr17	+	193	1	Intergenic	novelGene_2332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAAGAGCAGGGGGCTGGA	NA	False	NA	NA	False	NA	NA	NA	47913910	47914103	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_47913900_47914100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076081	chr17	-	579	3	FSM	ENSMUSG00000033475.16	ENSMUST00000113302.10	749	3	84	86	-31	8	multi-exon	FALSE	canonical	3	3748	junction_1	369	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATTCTTTTAATAAGAA	NA	False	NA	-4	True	AATAAA	-23	NA	47999024	47997656	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_47997934_47998112_47998214_47998823
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076089	chr17	-	586	3	FSM	ENSMUSG00000033475.16	ENSMUST00000113301.2	594	3	12	-4	12	4	multi-exon	FALSE	canonical	3	227	junction_1	2129.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATTTTATTCTTTTAATA	NA	False	NA	-8	True	AATAAA	-19	NA	47998981	47997660	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_47997988_47998112_47998214_47998823
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076113	chr17	+	1389	9	FSM	ENSMUSG00000023987.15	ENSMUST00000024782.12	1388	9	0	-1	0	1	multi-exon	FALSE	canonical	3	26	junction_3	162.479181358721	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTGTTGAGTCATTTG	NA	False	NA	17	True	AATAAA	-17	NA	48037766	48045408	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_48037890_48039666_48039827_48040176_48040295_48041018_48041138_48041523_48041724_48043309_48043430_48043885_48044037_48044681_48044781_48045109
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076121	chr17	+	633	4	NNC	ENSMUSG00000023987.15	novel	1388	9	NA	NA	5798	1	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_1	164.050805138733	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTGTTGAGTCATTTG	NA	False	NA	17	True	AATAAA	-17	NA	48043566	48045408	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_+_48043651_48043885_48044037_48044681_48044781_48045109
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076144	chr17	-	189	1	Intergenic	novelGene_2333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAACATATACATGTG	NA	False	NA	0	True	NA	NA	NA	48115913	48115724	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_48115700_48115900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076150	chr17	-	182	1	Intergenic	novelGene_2334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAAAACTTACTCTTCCT	9017	False	NA	NA	False	NA	NA	NA	48137291	48137109	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_48137100_48137300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076157	chr17	-	3202	17	FSM	ENSMUSG00000023991.17	ENSMUST00000113262.2	3198	17	0	-4	0	0	multi-exon	TRUE	canonical	3	96	junction_11	19.4871752699051	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGTTGGCTTTTTCTT	NA	False	NA	-3	True	NA	NA	NA	48235401	48178688	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189423_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076169	chr17	+	194	1	Intergenic	novelGene_2335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCACCTCACCCATACAGC	NA	False	NA	NA	False	NA	NA	NA	48222901	48223095	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_48222900_48223100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076172	chr17	+	258	1	Intergenic	novelGene_2336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGCAAGTTCACTTTTA	325	False	NA	NA	False	NA	NA	NA	48248175	48248433	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_48248200_48248400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076193	chr17	+	1020	6	NNC	ENSMUSG00000040771.15	novel	1324	6	NA	NA	31	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	419.268219639886	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTTTGCACACATGAAC	NA	False	NA	11	True	AATAAA	-19	NA	48717072	48724284	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_+_48717123_48717852_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076200	chr17	+	2509	5	ISM	ENSMUSG00000040771.15	ENSMUST00000046651.7	1135	6	-35	11	31	1	intron_retention	FALSE	canonical	3	263	junction_1	273.554382161939	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGGTTTGCACACATGAA	NA	False	NA	10	True	AATAAA	-18	NA	48717072	48724283	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr17_+_48717266_48717855_48717933_48718291_48718437_48721253_48721313_48722248
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076203	chr17	+	1178	6	NNC	ENSMUSG00000040771.15	novel	1135	6	NA	NA	31	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	404.287818268124	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACGTCTGTGTTCTGGAT	NA	False	NA	26	True	AATAAA	-34	NA	48717072	48724299	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_+_48717266_48717852_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076204	chr17	+	1164	6	FSM	ENSMUSG00000040771.15	ENSMUST00000046651.7	1135	6	-35	6	31	6	multi-exon	FALSE	canonical	0	0	junction_5	381.26547181721	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGCACACATGAACGTCT	NA	False	NA	15	True	AATAAA	-23	NA	48717072	48724288	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_48717266_48717855_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076215	chr17	+	1310	6	FSM	ENSMUSG00000040771.15	ENSMUST00000167180.8	1324	6	31	-17	31	5	multi-exon	FALSE	canonical	0	0	junction_5	371.627232586634	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACGTCTGTGTTCTGGAT	NA	False	NA	26	True	AATAAA	-34	NA	48717072	48724299	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_48717401_48717855_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076217	chr17	+	1301	6	NNC	ENSMUSG00000040771.15	novel	1324	6	NA	NA	31	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	403.460233480327	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTGCACACATGAACGTC	NA	False	NA	14	True	AATAAA	-22	NA	48717072	48724287	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_+_48717401_48717852_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076238	chr17	-	1225	3	FSM	ENSMUSG00000040694.5	ENSMUST00000046549.5	1420	3	196	-1	-116	1	multi-exon	FALSE	canonical	3	57	junction_2	11.5	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGCCTGTTCTCTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	48739762	48726257	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_48726662_48729968_48730534_48739506
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076248	chr17	+	189	1	Intergenic	novelGene_2337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTATGGGCCATCAATTT	NA	False	NA	NA	False	NA	NA	NA	48777616	48777805	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_48777600_48777800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076267	chr17	-	3011	10	FSM	ENSMUSG00000039316.15	ENSMUST00000044503.14	4029	10	16	1002	16	1	multi-exon	FALSE	canonical	3	80	junction_4	9.91071249821234	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGGTGAGAAGTATTT	NA	False	NA	-27	True	AATAAA	-14	NA	50497686	50300286	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_50301510_50309659_50309742_50311281_50311386_50343968_50344085_50354324_50354529_50362264_50362656_50393595_50393705_50414097_50414285_50476030_50476188_50497248
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076275	chr17	-	2982	11	FSM	ENSMUSG00000010592.10	ENSMUST00000010736.9	2976	11	-2	-4	-2	2	multi-exon	FALSE	canonical	3	352	junction_4	74.6324996231534	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGACTTACTGTCCTGTC	NA	False	NA	-1	True	AATAAA	-20	NA	50600666	50586420	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_50588340_50590155_50590255_50591265_50591380_50592023_50592075_50593278_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076279	chr17	-	4790	9	NIC	ENSMUSG00000010592.10	novel	2976	11	NA	NA	0	1	intron_retention	FALSE	canonical	3	445	junction_2	50.9208945325983	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGACTTACTGTCCTGT	NA	False	NA	-2	True	AATAAA	-19	NA	50600627	50586421	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_50588340_50590155_50590255_50591265_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076281	chr17	-	2893	10	NIC	ENSMUSG00000010592.10	novel	2976	11	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	158	junction_3	120.807570689102	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGACTTACTGTCCTGT	NA	False	NA	-2	True	AATAAA	-19	NA	50600629	50586421	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_50588340_50590155_50590255_50591265_50591380_50593278_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076298	chr17	+	205	1	Intergenic	novelGene_2338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAAGCTAATAAATATGT	6326	False	NA	NA	False	TTTAAA	-1	NA	50602823	50603028	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_50602800_50603000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076317	chr17	+	1375	1	FSM	ENSMUSG00000044645.9	ENSMUST00000061681.9	756	1	-163	-456	-163	456	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTGTTGGAAATTTGA	NA	False	NA	NA	False	AATAAA	-34	NA	51005552	51006927	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_51005600_51006900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076326	chr17	+	185	1	Intergenic	novelGene_2339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATATTCATTGGGCTTATA	NA	False	NA	NA	False	NA	NA	NA	53781717	53781902	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_53781700_53781900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076329	chr17	+	2412	6	FSM	ENSMUSG00000017831.9	ENSMUST00000017975.7	2366	6	-44	-2	-44	2	multi-exon	FALSE	canonical	3	761	junction_1	72.5131712173726	337	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTTTTCTCTGTCTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	53786217	53814710	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_53786637_53790848_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076344	chr17	+	176	1	Intergenic	novelGene_2340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAGGAAAATGG	NA	False	NA	NA	False	NA	NA	NA	53844827	53845003	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_53844800_53845000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076354	chr17	-	190	1	Intergenic	novelGene_2341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAAAGTGGGATG	NA	False	NA	NA	False	NA	NA	NA	53869716	53869526	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_53869500_53869700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076363	chr17	+	4372	18	FSM	ENSMUSG00000000708.15	ENSMUST00000000724.15	4653	18	282	-1	282	1	multi-exon	FALSE	canonical	3	180	junction_6	30.0116471047111	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTGTTATGTTTTATT	NA	False	NA	20	True	TTTAAA	-20	NA	53874280	53979749	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_53874607_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53955774_53955912_53960049_53960259_53961466_53961594_53966345_53966457_53967056_53967201_53970562_53970678_53972433_53972471_53972680_53972745_53972850_53972936_53977702
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076382	chr17	-	201	1	Intergenic	novelGene_2342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAATCCATGTGGTCTA	NA	False	NA	NA	False	NA	NA	NA	54833866	54833665	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_54833700_54833900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076393	chr17	+	183	1	Intergenic	novelGene_2343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTGTTTATTATTCCTT	NA	False	NA	NA	False	NA	NA	NA	56002404	56002587	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_56002400_56002600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076418	chr17	+	1679	8	FSM	ENSMUSG00000003208.10	ENSMUST00000086869.6	1660	8	-19	0	-17	0	multi-exon	FALSE	canonical	3	126	junction_5	8.99205998963212	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCGTGTTGGAGTCTGCT	325	False	NA	8	True	NA	NA	NA	56266154	56275285	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_56266262_56267712_56267814_56269018_56269164_56271129_56271265_56271485_56271668_56272168_56272290_56273507_56273638_56274527
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076433	chr17	+	193	1	Intergenic	novelGene_2344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGATTCTCATTACTCAG	NA	False	NA	NA	False	NA	NA	NA	56315064	56315257	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_56315100_56315300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076440	chr17	+	2326	13	FSM	ENSMUSG00000003199.17	ENSMUST00000149441.8	1701	13	-625	0	-625	0	multi-exon	FALSE	canonical	3	665	junction_1	98.0428973573416	307	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGAGTACAGTTCATTTC	NA	False	NA	146	True	TTTAAA	-7	NA	56315575	56323790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_56316257_56316329_56316587_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076468	chr17	-	2121	9	NIC	ENSMUSG00000003200.11	novel	2073	10	NA	NA	29	0	intron_retention	FALSE	canonical	3	585	junction_1	56.6192050014834	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTCCCATCTTCATT	NA	False	NA	-1	True	ATTAAA	-17	NA	56343606	56323749	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_56324737_56324843_56324901_56324982_56325108_56325574_56325679_56325803_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076475	chr17	+	3448	14	FSM	ENSMUSG00000002835.10	ENSMUST00000002914.10	5535	14	-154	2241	-154	-797	multi-exon	TRUE	canonical	3	392	junction_3	50.5723455079702	247	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTGTCTCAACTATCAT	NA	False	NA	29	True	TATAAA	-23	NA	56347284	56375035	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076489	chr17	-	1734	11	FSM	ENSMUSG00000019578.12	ENSMUST00000019722.12	2949	11	11	1204	0	1	multi-exon	FALSE	canonical	3	209	junction_10	25.0960156200143	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCCAGTGTTTCATCAG	6317	False	NA	-1	True	AATAAA	-18	NA	56382017	56375248	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_56375684_56375959_56376109_56376183_56376315_56376393_56376614_56376690_56376776_56377651_56377728_56377887_56377986_56379400_56379530_56379719_56379785_56380072_56380237_56381835
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076498	chr17	+	2297	16	FSM	ENSMUSG00000002833.12	ENSMUST00000226053.2	2270	16	-14	-13	-14	-2	multi-exon	FALSE	canonical	3	507	junction_6	104.875926694356	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56386619	56407605	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076507	chr17	+	2280	16	NIC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	309	junction_15	154.811225547618	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56386633	56407605	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407347
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076513	chr17	+	2306	16	FSM	ENSMUSG00000002833.12	ENSMUST00000225843.2	2238	16	-65	-3	0	3	multi-exon	FALSE	canonical	3	148	junction_6	179.285421108974	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACAGCTTTTATTGGCTT	NA	False	NA	NA	False	TATAAA	-19	NA	56386633	56407601	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403820_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076523	chr17	+	2246	16	FSM	ENSMUSG00000002833.12	ENSMUST00000002911.10	2264	16	23	-5	23	3	multi-exon	FALSE	canonical	3	66	junction_6	225.638196136105	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACAGCTTTTATTGGCTT	NA	False	NA	NA	False	TATAAA	-19	NA	56386660	56407601	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403850_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407347
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076527	chr17	+	2827	15	NIC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	23	-2	intron_retention	FALSE	canonical	3	635	junction_14	77.6569181642918	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56386660	56407605	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076528	chr17	+	2272	16	NNC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	23	3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_15	219.25719043068	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACAGCTTTTATTGGCTT	NA	False	NA	NA	False	TATAAA	-19	NA	56386660	56407601	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56407006_56407344
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076531	chr17	+	2820	15	NIC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	23	3	intron_retention	FALSE	canonical	3	309	junction_14	144.223412999217	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACAGCTTTTATTGGCTT	NA	False	NA	NA	False	TATAAA	-19	NA	56386660	56407601	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407347
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076532	chr17	+	2276	16	NIC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	23	3	combination_of_known_junctions	FALSE	canonical	3	148	junction_6	209.929787204092	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACAGCTTTTATTGGCTT	NA	False	NA	NA	False	TATAAA	-19	NA	56386660	56407601	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403820_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407347
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076535	chr17	+	2253	16	NIC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	23	-2	combination_of_known_junctions	FALSE	canonical	3	66	junction_6	198.047873000444	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56386660	56407605	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403850_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076571	chr17	+	2359	16	NIC	ENSMUSG00000002833.12	novel	3354	12	NA	NA	20	3	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	208.4942205434	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACAGCTTTTATTGGCTT	NA	False	NA	NA	False	TATAAA	-19	NA	56388443	56407601	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_56388717_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076586	chr17	-	3771	17	FSM	ENSMUSG00000001227.13	ENSMUST00000001256.11	3736	17	-35	0	-35	0	multi-exon	FALSE	canonical	2	8	junction_2	3.37036719067819	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTGACTCTGGGTCAGC	8316	False	NA	NA	False	AATAAA	-22	NA	56447378	56430084	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_56431918_56432332_56432392_56432516_56432595_56433216_56433367_56433449_56433633_56433939_56434090_56434477_56434610_56435249_56435468_56436407_56436497_56436972_56437093_56437705_56437797_56438112_56438215_56438522_56438586_56438742_56438804_56439497_56439622_56439715_56439869_56447213
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076605	chr17	-	3540	21	FSM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	-23	-143	-7	133	multi-exon	FALSE	canonical	3	103	junction_20	12.6925174807837	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGCCGCAGTGAGGCTC	NA	False	NA	NA	False	ATTAAA	-16	NA	56525912	56493673	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525740
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076619	chr17	+	3306	1	FSM	ENSMUSG00000043683.5	ENSMUST00000060253.5	6801	1	9	3486	9	-3486	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCCTAGCTGTTATTT	NA	False	NA	8	True	ATTAAA	-18	NA	56563818	56567124	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_56563800_56567100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076623	chr17	-	211	1	Intergenic	novelGene_2345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCCTCCCCCAAGGTCT	NA	False	NA	0	True	NA	NA	NA	56571707	56571496	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_56571500_56571700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076636	chr17	-	2174	8	FSM	ENSMUSG00000024197.11	ENSMUST00000019726.8	3645	8	-10	1481	-10	-1481	multi-exon	TRUE	canonical	3	548	junction_7	40.8821102534533	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTGTATATGTGTGTTG	NA	False	NA	0	True	AATAAA	-26	NA	56597521	56585956	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_56587074_56587741_56587868_56588406_56588607_56591132_56591431_56593212_56593296_56593447_56593647_56594793_56594877_56597453
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076642	chr17	-	538	1	ISM	ENSMUSG00000024197.11	ENSMUST00000019726.8	3645	8	11014	1484	11014	-1484	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGATGGTGTATATGTGTG	NA	False	NA	-3	True	AATAAA	-23	NA	56586497	56585959	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr17_-_56586000_56586500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076652	chr17	-	2213	7	ISM	ENSMUSG00000024197.11	ENSMUST00000019726.8	3645	8	2521	1488	2521	-1488	3prime_fragment	FALSE	canonical	3	572	junction_5	31.4536696322279	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTGGATGGTGTATATG	NA	False	NA	-7	True	AATAAA	-19	NA	56594990	56585963	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr17_-_56587074_56587741_56587868_56588406_56588607_56591132_56591431_56593212_56593296_56593447_56593647_56594793
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076664	chr17	+	192	1	Intergenic	novelGene_2346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTGGCATACCACTTGA	5699	False	NA	NA	False	NA	NA	NA	56590701	56590893	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_56590700_56590900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076671	chr17	+	3598	17	FSM	ENSMUSG00000001228.15	ENSMUST00000001258.15	3586	17	-12	0	-12	0	multi-exon	TRUE	canonical	3	1413	junction_6	319.856779473251	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	408	False	NA	36	True	AATAAA	-20	NA	56610308	56630486	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076686	chr17	+	3546	17	FSM	ENSMUSG00000001228.15	ENSMUST00000113038.8	3483	17	-63	0	16	0	multi-exon	FALSE	canonical	3	348	junction_6	505.023262923353	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	436	False	NA	36	True	AATAAA	-20	NA	56610336	56630486	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076689	chr17	+	3557	17	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	3	268	junction_4	539.303830038087	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	440	False	NA	36	True	AATAAA	-20	NA	56610340	56630486	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076721	chr17	+	3435	17	NNC	ENSMUSG00000001228.15	novel	3402	17	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	3	268	junction_4	716.894169316504	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1370	False	NA	36	True	AATAAA	-20	NA	56611270	56630486	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076733	chr17	+	3384	17	NNC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	268	junction_4	617.393054377639	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1445	False	NA	36	True	AATAAA	-20	NA	56611345	56630486	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076753	chr17	+	3281	3	ISM	ENSMUSG00000001228.15	ENSMUST00000113039.9	3391	17	9360	6145	1045	4165	intron_retention	FALSE	canonical	3	2243	junction_1	57.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGTAGAGCTGTAGTTACA	7208	False	NA	NA	False	NA	NA	NA	56620707	56624341	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr17_+_56622316_56622398_56622507_56622776
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076767	chr17	+	4589	23	FSM	ENSMUSG00000024201.13	ENSMUST00000025036.11	4577	23	-10	-2	2	2	multi-exon	FALSE	canonical	3	94	junction_12	23.0595707170123	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCATGGCTGTGTCTT	4899	False	NA	14	True	ATTAAA	-30	NA	56633063	56709866	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076823	chr17	-	3290	21	FSM	ENSMUSG00000042625.17	ENSMUST00000075510.12	3277	21	-13	0	-13	0	multi-exon	FALSE	canonical	3	72	junction_15	52.6718852899723	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTCTGCTGCCAGGCATT	NA	False	NA	2	True	AATAAA	-31	NA	56891598	56869938	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56882354_56883013_56883877_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076858	chr17	+	3189	21	FSM	ENSMUSG00000071054.13	ENSMUST00000182533.8	3122	21	8	-75	0	0	multi-exon	TRUE	canonical	3	97	junction_18	119.307543768196	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	7985	False	NA	35	True	AATAAA	-26	NA	56891981	56913294	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912550_56912658_56912796_56912864_56912975
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076862	chr17	+	3089	22	NNC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	129.939773245923	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	7987	False	NA	35	True	AATAAA	-26	NA	56891983	56913294	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_+_56892044_56892135_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076883	chr17	+	420	4	FSM	ENSMUSG00000057863.7	ENSMUST00000080492.7	383	4	-33	-4	-33	4	multi-exon	FALSE	canonical	3	5436	junction_1	2487.77200634535	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTATGTGTGAGCTC	NA	False	NA	3	True	AATAAA	-16	NA	56920382	56921247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_56920449_56920585_56920681_56920906_56921042_56921123
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076890	chr17	+	612	3	NIC	ENSMUSG00000057863.7	novel	383	4	NA	NA	0	3	intron_retention	FALSE	canonical	3	5436	junction_1	2267	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTATGTGTGAGCT	NA	False	NA	2	True	AATAAA	-15	NA	56920415	56921246	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_56920449_56920585_56921042_56921123
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076895	chr17	+	495	3	NIC	ENSMUSG00000057863.7	novel	383	4	NA	NA	28	3	intron_retention	FALSE	canonical	3	9970	junction_2	629.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTATGTGTGAGCT	NA	False	NA	2	True	AATAAA	-15	NA	56920443	56921246	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_56920681_56920906_56921042_56921123
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076915	chr17	-	4259	16	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	2	2	intron_retention	FALSE	canonical	3	584	junction_13	78.4682242836055	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGCCTGAGTCTCAGTG	1573	False	NA	-10	True	AATAAA	-19	NA	56933885	56921294	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076924	chr17	-	3023	17	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	584	junction_14	78.5590691374968	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	1571	False	NA	-12	True	AATAAA	-17	NA	56933887	56921296	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076934	chr17	+	184	1	Intergenic	novelGene_2347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAGAGAGGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	56944014	56944198	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_56944000_56944200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076940	chr17	+	2508	16	FSM	ENSMUSG00000002372.10	ENSMUST00000002445.10	2373	16	-130	-5	-66	5	multi-exon	FALSE	canonical	3	371	junction_2	28.8962896503263	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCTTTTGCACCTGGCA	NA	False	NA	NA	False	ATTAAA	-19	NA	56980227	57018769	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076962	chr17	-	2066	3	NNC	ENSMUSG00000054723.7	novel	2226	2	NA	NA	137	0	at_least_one_novel_splicesite	TRUE	canonical	3	54	junction_1	5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGACTCTACCTTTTTTC	7705	False	NA	-6	True	AATAAA	-16	NA	57023840	57020935	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_-_57021093_57021115_57022818_57023633
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076975	chr17	+	559	4	FSM	ENSMUSG00000002379.8	ENSMUST00000002452.8	545	4	0	-14	0	10	multi-exon	FALSE	canonical	3	2627	junction_1	54.2975342186201	283	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGCTTGCTGCATGAGA	NA	False	NA	32	True	AATAAA	-32	NA	57024766	57029151	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_57024943_57028034_57028128_57028318_57028442_57028984
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000076990	chr17	-	1057	3	FSM	ENSMUSG00000039481.6	ENSMUST00000044752.6	1023	3	-32	-2	-32	2	multi-exon	FALSE	canonical	3	134	junction_2	5	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGGTCGTTCATGCTC	NA	False	NA	-1	True	CATAAA	-17	NA	57064562	57058322	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_57058831_57059308_57059491_57064195
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077005	chr17	-	3454	18	FSM	ENSMUSG00000024206.16	ENSMUST00000002444.15	3350	18	-101	-3	-96	0	multi-exon	FALSE	canonical	3	81	junction_12	62.8192882463543	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTGTCCGTGTTTGTTC	NA	False	NA	-1	True	NA	NA	NA	57138109	57082896	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57106249_57106325_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077008	chr17	-	3378	17	FSM	ENSMUSG00000024206.16	ENSMUST00000086801.7	3283	17	-95	0	-95	0	multi-exon	FALSE	canonical	3	178	junction_12	29.2883695986991	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTGTCCGTGTTTGTTC	NA	False	NA	-1	True	NA	NA	NA	57138108	57082896	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077018	chr17	-	3281	16	NIC	ENSMUSG00000024206.16	novel	3283	17	NA	NA	-90	0	combination_of_known_junctions	TRUE	canonical	3	62	junction_15	59.2522292126353	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTGTCCGTGTTTGTTC	NA	False	NA	-1	True	NA	NA	NA	57138103	57082896	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57110477_57110740_57111325_57111397_57112357_57112448_57137882
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077040	chr17	-	3720	12	FSM	ENSMUSG00000024212.10	ENSMUST00000025053.10	3636	12	-81	-3	-81	3	multi-exon	FALSE	canonical	3	105	junction_9	16.3510052260045	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGCCTGCCTTCAATTCA	5953	False	NA	0	True	AATAAA	-18	NA	57242496	57199607	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_57201591_57201666_57201739_57201830_57201903_57201998_57202099_57203208_57203318_57204379_57204468_57206768_57207297_57209562_57209689_57212711_57212856_57226899_57226983_57233991_57234173_57242262
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077051	chr17	+	191	1	Intergenic	novelGene_2348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACTGATTGCTCTTCCA	8413	False	NA	NA	False	NA	NA	NA	57293776	57293967	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_57293800_57294000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077061	chr17	+	1010	6	FSM	ENSMUSG00000002660.9	ENSMUST00000002735.9	983	6	-19	-8	-19	8	multi-exon	FALSE	canonical	3	1307	junction_4	119.017645750536	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTCCATTACTTCTCC	NA	False	NA	41	True	ATTAAA	-29	NA	57297285	57303196	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_57297514_57297605_57297678_57298293_57298391_57299825_57300014_57300447_57300554_57302877
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077068	chr17	+	754	4	FSM	ENSMUSG00000002661.15	ENSMUST00000002737.7	917	4	-17	180	-13	5	multi-exon	FALSE	canonical	3	443	junction_1	15.369522511198	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGATCTTCAAATGACCGT	354	False	NA	9	True	AATAAA	-19	NA	57304325	57306142	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_57304568_57305388_57305563_57305670_57305796_57305929
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077082	chr17	-	1828	13	NNC	ENSMUSG00000002658.10	novel	1717	13	NA	NA	-110	4	at_least_one_novel_splicesite	FALSE	canonical	2	34	junction_6	168.206222635589	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCGAGTCATCACTGC	NA	False	NA	-2	True	AATAAA	-17	NA	57318398	57310400	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_-_57310632_57310720_57310812_57310914_57311054_57311121_57311196_57311308_57311429_57311510_57311570_57311665_57311820_57312359_57312545_57313985_57314157_57314712_57314907_57316687_57316761_57317975_57318023_57318108
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077085	chr17	-	1872	13	FSM	ENSMUSG00000002658.10	ENSMUST00000002733.7	1717	13	-151	-4	-151	4	multi-exon	FALSE	canonical	3	510	junction_7	59.552672763977	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCGAGTCATCACTGC	NA	False	NA	-2	True	AATAAA	-17	NA	57318439	57310400	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_57310632_57310720_57310812_57310914_57311054_57311121_57311196_57311308_57311429_57311510_57311573_57311665_57311820_57312359_57312545_57313985_57314157_57314712_57314907_57316687_57316761_57317975_57318023_57318108
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077110	chr17	-	3349	10	FSM	ENSMUSG00000046329.15	ENSMUST00000040280.14	3362	10	11	2	11	-2	multi-exon	FALSE	canonical	3	34	junction_6	5.45916377623922	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTTGATTTTTAATTGT	NA	False	NA	-9	True	AATAAA	-14	NA	57366852	57350712	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_57352664_57354185_57354337_57359681_57359850_57360240_57360349_57360546_57360700_57360783_57360943_57362273_57362386_57363581_57363670_57365107_57365235_57366520
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077114	chr17	+	1172	4	FSM	ENSMUSG00000044279.16	ENSMUST00000097299.10	1206	4	34	0	-18	0	multi-exon	FALSE	canonical	3	144	junction_1	33.4099120355355	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTAGCTGTAAGCTCTT	1560	False	NA	NA	False	AATAAA	-31	NA	57369264	57372918	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_57369374_57369594_57369767_57370636_57370699_57372089
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077120	chr17	+	1388	3	FSM	ENSMUSG00000044279.16	ENSMUST00000163763.2	868	3	-29	-491	-13	0	multi-exon	FALSE	canonical	3	202	junction_2	10.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTAGCTGTAAGCTCTT	1565	False	NA	NA	False	AATAAA	-31	NA	57369269	57372918	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_57369767_57370636_57370699_57372089
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077138	chr17	-	2111	17	FSM	ENSMUSG00000005823.10	ENSMUST00000005975.8	2064	17	11	-58	-6	30	multi-exon	FALSE	canonical	3	88	junction_12	32.0784560686764	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCGGAGCCCTGTGCT	NA	False	NA	-1	True	AAAAAG	-41	NA	57554678	57541913	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550114_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077139	chr17	-	2133	17	FSM	ENSMUSG00000005823.10	ENSMUST00000233568.2	2405	17	-7	279	-7	30	multi-exon	FALSE	canonical	3	119	junction_12	26.3293443708726	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCGGAGCCCTGTGCT	NA	False	NA	-1	True	AAAAAG	-41	NA	57554679	57541913	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550135_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077150	chr17	+	2040	14	FSM	ENSMUSG00000019487.12	ENSMUST00000019631.11	2224	14	-54	238	-27	0	multi-exon	FALSE	canonical	3	302	junction_12	30.2353686068634	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTGGAGTCTGCACCGC	NA	False	NA	13	True	ATTAAA	-23	NA	57556427	57570427	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_57556572_57557741_57557858_57557954_57558012_57560261_57560410_57560496_57560560_57561056_57561162_57561259_57561389_57562017_57562165_57562272_57562468_57564234_57564345_57568289_57568423_57568639_57568789_57569356_57569473_57569999
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077169	chr17	+	200	1	Intergenic	novelGene_2349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACCTACTCCCCCATGT	NA	False	NA	NA	False	NA	NA	NA	57584819	57585019	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_57584800_57585000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077191	chr17	-	3264	9	FSM	ENSMUSG00000023965.14	ENSMUST00000024761.13	4925	9	-354	2015	-354	-529	multi-exon	FALSE	canonical	3	52	junction_1	4.68874983337776	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTTCGCTTTTACTG	NA	False	NA	-7	True	AATAAA	-24	NA	63807366	63366461	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_63367407_63387415_63387559_63532019_63532097_63663742_63663874_63691939_63692048_63778402_63778535_63794706_63794965_63797759_63797883_63806019
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077235	chr17	-	166	1	Intergenic	novelGene_2350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGATTCATCTTTAA	NA	False	NA	NA	False	NA	NA	NA	64694193	64694027	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_64694000_64694200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077241	chr17	+	7036	22	FSM	ENSMUSG00000024085.14	ENSMUST00000086723.10	6991	22	-45	0	-45	0	multi-exon	FALSE	canonical	3	46	junction_3	8.61970531560628	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTTCTGGAGTAATT	NA	False	NA	9	True	AATAAA	-19	NA	64907685	65062105	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_64908866_64931522_64931775_64932301_64932447_64943478_64943651_64958190_64958319_64965895_64966070_64973731_64973919_64976406_64976585_64978842_64979046_64982059_64982243_64986746_64986862_64988549_64988621_65017698_65017865_65019246_65019469_65020556_65020680_65021592_65021708_65038198_65038333_65040718_65040861_65041928_65042063_65047674_65047879_65057778_65057890_65059408
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077250	chr17	+	198	1	Intergenic	novelGene_2351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGGGCAATGATGGTGT	NA	False	NA	NA	False	NA	NA	NA	65701825	65702023	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_65701800_65702000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077262	chr17	-	1658	6	FSM	ENSMUSG00000024091.10	ENSMUST00000024897.10	3369	6	-14	1725	-14	368	multi-exon	FALSE	canonical	3	3309	junction_3	105.717737395387	472	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGTGTCTGTCATGT	2949	False	NA	-4	True	AATAAA	-27	NA	65920564	65887046	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_65887843_65889574_65889749_65899285_65899367_65900434_65900539_65901896_65902050_65920214
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077273	chr17	-	3367	7	FSM	ENSMUSG00000056515.10	ENSMUST00000070673.9	3473	7	106	0	-6	0	multi-exon	TRUE	canonical	3	62	junction_1	10.1775897605147	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTGTCCTTTCCTCATT	NA	False	NA	0	True	AATAAA	-15	NA	66079641	65958723	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_65961499_65974860_65974971_66003265_66003373_66004985_66005058_66024476_66024559_66029002_66029083_66079500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077286	chr17	-	176	1	Intergenic	novelGene_2352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAGATAGGAAAGT	NA	False	NA	NA	False	NA	NA	NA	66023863	66023687	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_66023700_66023900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077289	chr17	+	191	1	Intergenic	novelGene_2353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGAAACTCTAGTT	NA	False	NA	NA	False	NA	NA	NA	66085948	66086139	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_66085900_66086100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077319	chr17	-	3786	10	NIC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	-67	3	combination_of_known_junctions	FALSE	canonical	1	23	junction_9	213.995384743125	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTATTGTCCACTCTT	NA	False	NA	NA	False	AATAAA	-34	NA	66191465	66155409	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66191216
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077325	chr17	-	3674	10	FSM	ENSMUSG00000024096.18	ENSMUST00000166543.10	3799	10	476	-351	-368	3	multi-exon	FALSE	canonical	1	126	junction_9	189.388163682976	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTATTGTCCACTCTT	NA	False	NA	NA	False	AATAAA	-34	NA	66192317	66155409	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66192180
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077330	chr17	-	3785	10	FSM	ENSMUSG00000024096.18	ENSMUST00000024905.11	3811	10	29	-3	29	3	multi-exon	FALSE	canonical	1	202	junction_3	142.261973611371	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTATTGTCCACTCTT	NA	False	NA	NA	False	AATAAA	-34	NA	66191920	66155409	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66191672
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077344	chr17	-	176	1	Antisense	novelGene_ENSMUSG00000117250.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTAGCAATCTATGCATA	NA	False	NA	5	True	NA	NA	NA	66196187	66196011	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr17_-_66196000_66196200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077350	chr17	+	195	1	Intergenic	novelGene_2354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTACTTGGAAAAGTTAAC	NA	False	NA	NA	False	NA	NA	NA	66197579	66197774	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_66197600_66197800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077366	chr17	-	4072	5	FSM	ENSMUSG00000024098.7	ENSMUST00000024906.6	4086	5	14	0	14	0	multi-exon	FALSE	canonical	3	222	junction_1	25.0636689253589	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGTTTTTTATTAATTT	8708	False	NA	1	True	AATAAA	-19	NA	66258207	66230059	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_66233462_66236541_66236809_66244795_66244896_66255652_66255810_66258061
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077372	chr17	-	3927	6	NIC	ENSMUSG00000024098.7	novel	4086	5	NA	NA	-33	-5	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	105.899952785636	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTCATGTTTTTTATT	8750	False	NA	-4	True	AATAAA	-14	NA	66258165	66230064	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_66233154_66233251_66233462_66236541_66236809_66244795_66244896_66255652_66255810_66258061
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077377	chr17	-	185	1	Intergenic	novelGene_2355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAACAAACAAACAAACTCT	NA	False	NA	NA	False	NA	NA	NA	66252130	66251945	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_66251900_66252100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077385	chr17	+	178	1	Intergenic	novelGene_2356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAGCTCTCAATTA	NA	False	NA	3	True	NA	NA	NA	66267525	66267703	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_66267500_66267700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077389	chr17	+	177	1	Intergenic	novelGene_2357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAATGTAACTAAATTATT	NA	False	NA	NA	False	NA	NA	NA	66334548	66334725	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_66334500_66334700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077445	chr17	-	4800	11	ISM	ENSMUSG00000052105.18	ENSMUST00000097291.10	7274	15	-39	10972	-39	8	5prime_fragment	FALSE	canonical	3	123	junction_9	30.9258791305922	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGTACAGTTTTCTGAT	NA	False	NA	3	True	AATAAA	-27	NA	66756784	66654952	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr17_-_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077452	chr17	-	1925	3	Genic_Genomic	ENSMUSG00000052105.18	novel	5441	16	NA	NA	2138	-3987	multi-exon	TRUE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGTACAGTTACGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	66679521	66677325	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr17_-_66677336_66677421_66679267_66679451
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077464	chr17	+	213	1	Intergenic	novelGene_2358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTCGACTGCTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	66774218	66774431	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_66774200_66774400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077472	chr17	-	176	1	Intergenic	novelGene_2359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAGTCATCATCTCT	NA	False	NA	NA	False	NA	NA	NA	66783993	66783817	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_66783800_66784000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077473	chr17	-	2073	6	FSM	ENSMUSG00000023460.14	ENSMUST00000070538.12	2069	6	2	-6	2	6	multi-exon	FALSE	canonical	3	199	junction_3	22.1720544830649	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCGTGTGTTTGTGCAG	NA	False	NA	2	True	AATAAA	-28	NA	66826722	66801500	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_66802799_66804338_66804444_66805013_66805104_66807304_66807444_66813027_66813089_66826342
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077491	chr17	-	210	1	Intergenic	novelGene_2360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAATTCATCCTAATGAAA	NA	False	NA	NA	False	NA	NA	NA	66809861	66809651	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_66809700_66809900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077498	chr17	-	206	1	Intergenic	novelGene_2361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGGAACCCATCCCCCAC	NA	False	NA	NA	False	NA	NA	NA	66968831	66968625	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_66968600_66968800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077533	chr17	+	178	1	Intergenic	novelGene_2362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAATGTAGGTTTCC	NA	False	NA	NA	False	NA	NA	NA	69620273	69620451	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_69620300_69620500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077541	chr17	+	192	1	Intergenic	novelGene_2363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTCTGTTGGGCTGGAG	NA	False	NA	NA	False	NA	NA	NA	69671919	69672111	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_69671900_69672100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077547	chr17	+	3779	3	FSM	ENSMUSG00000049672.16	ENSMUST00000112674.8	3743	3	-242	206	-242	-206	multi-exon	FALSE	canonical	3	85	junction_1	58	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTTCTTGATCATTCT	NA	False	NA	NA	False	TATAAA	-16	NA	69689802	69697539	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_69690265_69692415_69692500_69694306
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077553	chr17	+	3408	3	FSM	ENSMUSG00000049672.16	ENSMUST00000062369.14	3625	3	11	206	11	-206	multi-exon	FALSE	canonical	3	64	junction_1	68.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTTCTTGATCATTCT	NA	False	NA	NA	False	TATAAA	-16	NA	69690324	69697539	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_69690416_69692415_69692500_69694306
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077568	chr17	+	182	1	Intergenic	novelGene_2364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTCAGGGATTGTTTTA	5882	False	NA	NA	False	NA	NA	NA	70906923	70907105	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_70906900_70907100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077577	chr17	+	209	1	Intergenic	novelGene_2365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTCGCAGACACCTGCA	264	False	NA	NA	False	NA	NA	NA	71064368	71064577	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_71064400_71064600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077582	chr17	+	169	1	Intergenic	novelGene_2366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAAGGTTTTAA	3131	False	NA	NA	False	NA	NA	NA	71073786	71073955	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_71073800_71074000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077588	chr17	+	193	1	Intergenic	novelGene_2367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACTACATGGTAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	71085346	71085539	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_71085300_71085500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077598	chr17	+	191	1	Intergenic	novelGene_2368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGGTGAACAGCATATT	3048	False	NA	NA	False	NA	NA	NA	71093419	71093610	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_71093400_71093600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077605	chr17	-	207	1	Intergenic	novelGene_2369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCCAAAGTGGGGTTAAT	NA	False	NA	NA	False	NA	NA	NA	71099476	71099269	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_71099300_71099500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077613	chr17	-	184	1	Intergenic	novelGene_2370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACAGTTATACAGGCTTA	NA	False	NA	NA	False	NA	NA	NA	71131476	71131292	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_71131300_71131500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077619	chr17	+	181	1	Intergenic	novelGene_2371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATGTACAGAGACGTGG	NA	False	NA	NA	False	NA	NA	NA	71134748	71134929	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_71134700_71134900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077636	chr17	-	1382	3	FSM	ENSMUSG00000047407.18	ENSMUST00000118283.8	1388	3	6	0	6	0	multi-exon	FALSE	canonical	3	296	junction_2	292	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAATGAAGAGCATTTTC	NA	False	NA	78	True	AATAAA	-20	NA	71160535	71151205	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_71152268_71153166_71153394_71160442
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077655	chr17	+	196	1	Intergenic	novelGene_2372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACTGACTGCTCTTCCA	NA	False	NA	NA	False	NA	NA	NA	71235637	71235833	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_71235600_71235800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077672	chr17	-	1027	4	FSM	ENSMUSG00000024048.16	ENSMUST00000148960.8	1937	4	278	632	-89	-1	multi-exon	FALSE	canonical	3	2551	junction_2	294.524475496803	421	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTAGCGTTATTTGCC	2205	False	NA	-13	True	ATTAAA	-20	NA	71309271	71301282	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_71301780_71303104_71303267_71303691_71303891_71309102
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077681	chr17	+	5746	20	NIC	ENSMUSG00000024052.18	novel	1112	11	NA	NA	-19	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_7	6.20606440967734	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATTGGGCTCCTTCCTTC	NA	False	NA	NA	False	AATAAA	-16	NA	71490531	71556813	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_71490740_71521958_71522160_71529049_71529146_71531934_71532237_71536302_71536411_71537266_71537391_71538177_71538515_71540822_71540923_71544380_71544569_71545602_71545697_71546078_71546149_71547806_71547897_71548638_71548722_71549620_71549766_71550282_71550432_71550919_71551007_71551766_71551920_71552113_71552229_71553410_71553515_71553821
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077692	chr17	-	7230	48	FSM	ENSMUSG00000024054.15	ENSMUST00000127430.2	7052	48	-178	0	-178	0	multi-exon	TRUE	canonical	3	108	junction_42	32.1184571856639	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGGTTTCCTTGATTGA	NA	False	NA	NA	False	AATAAA	-29	NA	71782516	71651483	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_71652361_71655880_71655996_71656584_71656744_71660380_71660553_71665131_71665203_71665342_71665453_71667021_71667213_71668835_71668959_71670014_71670101_71672083_71672204_71672340_71672468_71676802_71676956_71677218_71677351_71677903_71677992_71684008_71684074_71685142_71685259_71686536_71686695_71687123_71687204_71688326_71688453_71693939_71694108_71696737_71696857_71697421_71697511_71698346_71698496_71701711_71701940_71705546_71705685_71707053_71707194_71710092_71710166_71714161_71714259_71718764_71718910_71722029_71722150_71722595_71722674_71733149_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456_71736652_71738216_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762731_71763412_71763496_71770756_71770919_71772588_71772665_71781973
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077701	chr17	+	182	1	Intergenic	novelGene_2373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGGCTGAAGCATTAGA	2577	False	NA	NA	False	NA	NA	NA	71789793	71789975	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_71789800_71790000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077706	chr17	-	2214	17	FSM	ENSMUSG00000024056.11	ENSMUST00000024851.10	2201	17	-12	-1	-12	1	multi-exon	TRUE	canonical	3	248	junction_10	48.8427003246135	283	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCCCTCCCATTTCTGT	NA	False	NA	-10	True	AATAAA	-20	NA	71833864	71803093	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_71803349_71806261_71806365_71807266_71807398_71808503_71808597_71811760_71811851_71814254_71814408_71815562_71815769_71818339_71818485_71819387_71819495_71821183_71821278_71824538_71824629_71825732_71825836_71827754_71827928_71828022_71828147_71830576_71830655_71832627_71832738_71833705
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077717	chr17	+	210	1	Intergenic	novelGene_2374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATAATCAGATATTCAA	NA	False	NA	NA	False	AAGAAA	-10	NA	71842809	71843019	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_71842800_71843000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077722	chr17	-	179	1	Intergenic	novelGene_2375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGTTTTTTTC	NA	False	NA	0	True	NA	NA	NA	71870465	71870286	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_71870300_71870500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077729	chr17	-	1277	3	FSM	ENSMUSG00000085492.8	ENSMUST00000143828.2	781	3	-493	-3	0	3	multi-exon	FALSE	canonical	3	25	junction_2	30	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATGTATTTTTTAAGAT	NA	False	NA	-12	True	AATAAA	-20	NA	71905741	71895548	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_71895980_71897482_71897518_71904930
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077735	chr17	+	182	1	Intergenic	novelGene_2376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATCTATAATATTT	NA	False	NA	NA	False	NA	NA	NA	71896598	71896780	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_71896600_71896800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077793	chr17	+	1308	3	FSM	ENSMUSG00000039770.7	ENSMUST00000233886.2	704	3	69	-673	69	673	multi-exon	FALSE	canonical	3	29	junction_1	156.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGTCCTCTGTTACT	1897	False	NA	13	True	AATAAA	-13	NA	73144599	73156502	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_73144815_73153273_73153439_73155574
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077803	chr17	+	4420	6	FSM	ENSMUSG00000054469.15	ENSMUST00000067545.8	4467	6	47	0	47	0	multi-exon	FALSE	canonical	3	22	junction_1	24.2866218317822	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTGATTCTGTTTTT	NA	False	NA	16	True	AATAAA	-26	NA	73415035	73550363	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_73415173_73468817_73468987_73476490_73476690_73494869_73495017_73503673_73503791_73546712
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077805	chr17	+	4394	6	NIC	ENSMUSG00000054469.15	novel	4467	6	NA	NA	52	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	15.992498241363	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTGATTCTGTTTTT	NA	False	NA	16	True	AATAAA	-26	NA	73415040	73550363	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_73415152_73468817_73468987_73476490_73476690_73494869_73495017_73503673_73503791_73546712
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077813	chr17	+	215	1	Intergenic	novelGene_2377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATACAACTGTTTGTGGA	NA	False	NA	NA	False	NA	NA	NA	73422779	73422994	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_73422800_73423000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077820	chr17	+	224	1	Intergenic	novelGene_2378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCCTGTACAGGGAGAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	74447813	74448037	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_74447800_74448000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077829	chr17	+	211	1	Antisense	novelGene_ENSMUSG00000117113.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAGGAATGGGTGTGA	7665	False	NA	NA	False	NA	NA	NA	74497290	74497501	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr17_+_74497300_74497500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077848	chr17	+	204	1	Intergenic	novelGene_2379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCACCATCACCATTGGG	NA	False	NA	NA	False	AAAAAG	-12	NA	74593653	74593857	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_74593700_74593900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077854	chr17	+	182	1	Intergenic	novelGene_2380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAGGAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	74596402	74596584	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_74596400_74596600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077886	chr17	+	4822	17	FSM	ENSMUSG00000024068.9	ENSMUST00000024869.8	4672	17	-150	0	-124	0	multi-exon	FALSE	canonical	3	114	junction_1	37.2180546744453	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATAGTCTTCGATATT	9717	False	NA	33	True	AATAAA	-24	NA	74645857	74698110	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_74646441_74658944_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077897	chr17	+	199	1	Intergenic	novelGene_2381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTACGGGGCAGGAGAG	NA	False	NA	NA	False	NA	NA	NA	74652029	74652228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_74652000_74652200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077901	chr17	+	2153	14	FSM	ENSMUSG00000024069.15	ENSMUST00000024870.9	2148	14	5	-10	5	10	multi-exon	TRUE	canonical	3	152	junction_5	21.3572043468894	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCGTAGTATATTTGTATA	NA	False	NA	NA	False	AATAAA	-33	NA	74702607	74731226	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077911	chr17	+	181	1	Intergenic	novelGene_2382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAATGCTTATCAG	9555	False	NA	NA	False	NA	NA	NA	74712280	74712461	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_74712300_74712500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077916	chr17	+	188	1	Intergenic	novelGene_2383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGCCTGTTCTTGAGTTC	NA	False	NA	NA	False	TTTAAA	-3	NA	74735104	74735292	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_74735100_74735300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077924	chr17	+	182	1	Intergenic	novelGene_2384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTAATCAGTTGATCAGC	NA	False	NA	NA	False	NA	NA	NA	74767069	74767251	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_74767100_74767300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077933	chr17	+	207	1	Intergenic	novelGene_2385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGACCAGCATCACTAA	4695	False	NA	NA	False	NA	NA	NA	74774761	74774968	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_74774800_74775000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077935	chr17	+	184	1	Intergenic	novelGene_2386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAATATCTCCATA	NA	False	NA	NA	False	NA	NA	NA	74791576	74791760	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_74791600_74791800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077947	chr17	-	378	3	NNC	ENSMUSG00000117358.2	novel	327	3	NA	NA	253	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	48.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGCCATTGGTCTCAGT	NA	False	NA	-8	True	AATAAA	-11	NA	74834386	74826662	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_-_74826911_74830509_74830574_74834320
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077951	chr17	-	212	1	Intergenic	novelGene_2387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAAAGAAAGGCAGAGA	NA	False	NA	NA	False	AATAAA	-21	NA	74863078	74862866	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_74862900_74863100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077957	chr17	+	211	1	Intergenic	novelGene_2388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGTTGGTTAAATCATTAT	NA	False	NA	NA	False	NA	NA	NA	74981940	74982151	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_74981900_74982200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077959	chr17	+	177	1	Intergenic	novelGene_2389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCTAATAGATTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74996547	74996724	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_74996500_74996700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077965	chr17	+	253	1	Intergenic	novelGene_2390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGGGAAAGTGTTAGAA	6094	False	NA	NA	False	NA	NA	NA	75011909	75012162	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_75011900_75012200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077983	chr17	+	2817	20	FSM	ENSMUSG00000024078.8	ENSMUST00000234568.2	2651	20	-162	-4	-12	0	multi-exon	FALSE	canonical	3	41	junction_19	29.4919116570221	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTGTGATGTTCTCA	NA	False	NA	10	True	AATAAA	-21	NA	75024744	75170565	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_75025007_75025628_75025807_75028515_75028646_75031612_75031754_75036877_75036981_75046592_75046758_75049912_75050047_75054646_75054760_75058056_75058124_75077237_75077352_75084638_75084735_75087777_75087901_75106178_75106407_75136486_75136586_75142327_75142381_75147293_75147460_75163403_75163602_75165003_75165116_75169040_75169142_75170331
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000077985	chr17	+	2820	20	FSM	ENSMUSG00000024078.8	ENSMUST00000024882.8	2838	20	18	0	-12	0	multi-exon	FALSE	canonical	3	124	junction_5	16.0728948897983	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTGTGATGTTCTCA	NA	False	NA	10	True	AATAAA	-21	NA	75024744	75170565	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_75025007_75025628_75025807_75028515_75028646_75031612_75031754_75036877_75036981_75046592_75046758_75049912_75050047_75054646_75054760_75058056_75058124_75077237_75077352_75084638_75084735_75087777_75087901_75106178_75106407_75136486_75136586_75142327_75142381_75147293_75147460_75163403_75163602_75165003_75165116_75169040_75169142_75170328
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078000	chr17	+	230	1	Intergenic	novelGene_2391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	667	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTATTGTTGCCAGGCGGTG	NA	False	NA	NA	False	AAAAAG	-24	NA	75268934	75269164	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_75268900_75269200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078011	chr17	-	2767	8	FSM	ENSMUSG00000002017.11	ENSMUST00000112507.4	2817	8	50	0	-23	0	multi-exon	FALSE	canonical	3	156	junction_4	28.1765570527511	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGGAGTTTTCTTTTA	NA	False	NA	-1	True	AATAAA	-22	NA	75858891	75844080	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_75845857_75845941_75846110_75846395_75846513_75847105_75847187_75848190_75848376_75851742_75851878_75854605_75854755_75858735
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078020	chr17	+	187	1	Intergenic	novelGene_2392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATGGAAGAAAAGAATTA	NA	False	NA	NA	False	NA	NA	NA	77578911	77579098	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_77578900_77579100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078026	chr17	-	1924	8	FSM	ENSMUSG00000056121.17	ENSMUST00000070039.14	1939	8	22	-7	-13	0	multi-exon	FALSE	canonical	3	258	junction_3	15.727267365169	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGAGTTTTTGTTCGGG	NA	False	NA	1	True	AATAAA	-20	NA	78725538	78685306	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_78686175_78689036_78689103_78692172_78692249_78708058_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78725261
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078038	chr17	+	219	1	Intergenic	novelGene_2393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATAAAATTAATTTTAGAA	NA	False	NA	NA	False	NA	NA	NA	78699235	78699454	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_78699200_78699500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078056	chr17	-	6424	36	FSM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	-42	6	-2	1	multi-exon	TRUE	canonical	3	55	junction_23	13.6878912673552	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGAGCATTCATACAGTA	NA	False	NA	NA	False	AATAAA	-18	NA	79142795	79060332	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_79060766_79062639_79062854_79064291_79064444_79067844_79068070_79069428_79069696_79070361_79070507_79072756_79072885_79074308_79074564_79075794_79076033_79080966_79081147_79095633_79095703_79098863_79099046_79102523_79102776_79103250_79103491_79103812_79103958_79109041_79109212_79110800_79110991_79113375_79113536_79115758_79115950_79117936_79118043_79120523_79120700_79121500_79121665_79122918_79123029_79123660_79123761_79124901_79125055_79126234_79126347_79128049_79128301_79128843_79129000_79131924_79132175_79133660_79133819_79135360_79135533_79136921_79137072_79137987_79138097_79138802_79139015_79141524_79141673_79142734
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078063	chr17	+	191	1	Intergenic	novelGene_2394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTATCACCTCCTCCTT	NA	False	NA	NA	False	AATACA	-16	NA	79095792	79095983	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_79095800_79096000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078080	chr17	-	1188	4	ISM	ENSMUSG00000038045.15	ENSMUST00000146474.8	764	5	-46	-12	-46	12	intron_retention	FALSE	canonical	3	141	junction_3	32.273139846559	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCTGTCAGTGTGTTGT	NA	False	NA	-4	True	ATTAAA	-28	NA	79202575	79192313	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr17_-_79192646_79196359_79196517_79198274_79198370_79201971
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078097	chr17	+	600	5	FSM	ENSMUSG00000062691.11	ENSMUST00000180077.7	602	5	2	0	2	0	multi-exon	FALSE	canonical	3	686	junction_1	395.694563394546	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGTGTGTGGGTCTGCAG	NA	False	NA	NA	False	AATAAA	-22	NA	79223930	79227735	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_79223955_79225785_79225902_79226484_79226530_79227187_79227273_79227405
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078107	chr17	-	4107	16	FSM	ENSMUSG00000024081.10	ENSMUST00000024885.10	4070	16	-34	-3	-34	3	multi-exon	FALSE	canonical	3	465	junction_13	57.736720454914	726	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTGTCTATTAGCATTTT	NA	False	NA	0	True	ATTAAA	-43	NA	79244529	79226431	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242003_79243497_79244303
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078129	chr17	-	5910	19	FSM	ENSMUSG00000024070.16	ENSMUST00000119284.8	4743	19	-23	-1144	-23	0	multi-exon	FALSE	canonical	3	97	junction_5	36.6411106225551	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCCTATGTGAAAACCTT	NA	False	NA	1	True	AATAAA	-22	NA	79328268	79256833	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270009_79273603_79273881_79275468_79275547_79278788_79278913_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078138	chr17	-	4210	9	NIC	ENSMUSG00000024070.16	novel	5884	19	NA	NA	-20	34	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	42.4941172399192	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGTTTTATTTATAATA	NA	False	NA	NA	False	NA	NA	NA	79328265	79277013	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_79279270_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078141	chr17	-	366	1	ISM	ENSMUSG00000024070.16	ENSMUST00000124229.8	3201	7	14923	541	14923	-541	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTGTTTAATATATTTA	NA	False	NA	0	True	NA	NA	NA	79277954	79277588	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr17_-_79277600_79278000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078157	chr17	+	1728	7	FSM	ENSMUSG00000024084.9	ENSMUST00000040789.6	2059	7	338	-7	56	7	multi-exon	TRUE	canonical	3	226	junction_1	6.47216261298253	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTATTGCCTCTTTGTTT	NA	False	NA	5	True	AATATA	-21	NA	79359672	79397814	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_79359818_79371356_79371504_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078167	chr17	-	2272	2	FSM	ENSMUSG00000036533.10	ENSMUST00000068958.9	2265	2	-8	1	-8	-1	multi-exon	FALSE	canonical	3	71	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGAACGTGTTCATTT	NA	False	NA	NA	False	AATAAA	-11	NA	79662528	79641156	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_79643146_79662245
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078180	chr17	-	3551	13	FSM	ENSMUSG00000059811.14	ENSMUST00000068282.7	3618	13	67	0	-5	0	multi-exon	TRUE	canonical	3	301	junction_5	41.6619997386374	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGTGTTCTGAAATTAAA	3818	False	NA	-2	True	AATAAA	-18	NA	80203485	80155818	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078196	chr17	-	3392	13	NIC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	105.266988599888	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAAGTTGTGATTCTTTTT	3819	False	NA	NA	False	ATTAAA	-21	NA	80203484	80156491	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_80158223_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078205	chr17	-	212	1	Intergenic	novelGene_2395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACATTAGAGCCAGTAGTA	NA	False	NA	NA	False	NA	NA	NA	80427920	80427708	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_80427700_80427900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078212	chr17	+	2335	7	FSM	ENSMUSG00000035473.11	ENSMUST00000039205.11	2314	7	-20	-1	-20	1	multi-exon	FALSE	canonical	3	126	junction_3	8.09149072929224	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGACTCTTGTTCTTTTGT	NA	False	NA	12	True	AATAAA	-20	NA	80434879	80492531	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_80435335_80445441_80445597_80452408_80452616_80457517_80457600_80488989_80489132_80490620_80490796_80491412
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078221	chr17	+	223	1	Intergenic	novelGene_2396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATAAGAGTAAGGCTGG	NA	False	NA	NA	False	NA	NA	NA	80498393	80498616	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_80498400_80498600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078234	chr17	-	2295	8	FSM	ENSMUSG00000024097.12	ENSMUST00000063417.11	2288	8	-1	-6	-1	6	multi-exon	FALSE	canonical	3	759	junction_3	505.274425335341	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCAGTCTTTGGAAGTAT	NA	False	NA	-5	True	AATAAA	-29	NA	80514735	80507502	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078235	chr17	-	2261	8	NIC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	3	229	junction_3	678.209978922608	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCAGTCTTTGGAAGTAT	NA	False	NA	-5	True	AATAAA	-29	NA	80514734	80507502	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511583_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078239	chr17	-	2285	8	FSM	ENSMUSG00000024097.12	ENSMUST00000235069.2	1040	8	-2	-1243	0	6	multi-exon	FALSE	canonical	3	1059	junction_3	412.241508371597	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCAGTCTTTGGAAGTAT	NA	False	NA	-5	True	AATAAA	-29	NA	80514734	80507502	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078252	chr17	-	3162	7	NIC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	759	junction_3	536.547735268934	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATATTCAGTCTTTGG	NA	False	NA	-11	True	AATAAA	-23	NA	80514734	80507508	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80512868_80513276_80513458_80514603
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078255	chr17	-	2252	7	NIC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	135	junction_1	822.802257869748	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATATTCAGTCTTTGG	NA	False	NA	-11	True	AATAAA	-23	NA	80514734	80507508	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_80509032_80510119_80510174_80511550_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078256	chr17	-	4539	6	NIC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	1956	junction_1	145.974792344432	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATATTCAGTCTTTGG	NA	False	NA	-11	True	AATAAA	-23	NA	80514734	80507508	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_80509032_80509597_80509634_80510119_80511662_80511741_80512868_80513276_80513458_80514603
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078257	chr17	-	3153	7	FSM	ENSMUSG00000024097.12	ENSMUST00000235036.2	1921	7	0	-1232	0	0	multi-exon	FALSE	canonical	3	1059	junction_3	429.146601472685	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATATTCAGTCTTTGG	NA	False	NA	-11	True	AATAAA	-23	NA	80514734	80507508	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80512868_80513276_80513458_80514603
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078258	chr17	-	2243	7	NIC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	135	junction_1	782.029553292088	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATATTCAGTCTTTGG	NA	False	NA	-11	True	AATAAA	-23	NA	80514734	80507508	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_80509032_80510119_80510174_80511559_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078269	chr17	-	3127	7	FSM	ENSMUSG00000024097.12	ENSMUST00000234889.2	1898	7	1	-1230	0	0	multi-exon	FALSE	canonical	3	229	junction_3	729.529623951092	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATATTCAGTCTTTGG	NA	False	NA	-11	True	AATAAA	-23	NA	80514732	80507508	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511583_80511662_80511741_80512868_80513276_80513458_80514603
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078273	chr17	-	2393	9	NNC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_6	914.111146141431	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATATTCAGTCTTTGG	NA	False	NA	-11	True	AATAAA	-23	NA	80514732	80507508	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80511817_80512403_80512511_80512690_80512868_80513276_80513458_80514603
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078297	chr17	-	1509	9	FSM	ENSMUSG00000024097.12	ENSMUST00000234503.2	1991	9	2	480	0	0	multi-exon	FALSE	canonical	3	75	junction_6	890.532565378718	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514734	80508738	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80511817_80512050_80512511_80512690_80512868_80513276_80513458_80514603
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078298	chr17	-	2433	7	NIC	ENSMUSG00000024097.12	novel	1040	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	1657	junction_4	228.054391660313	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514732	80508738	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_-_80509032_80509597_80509634_80510119_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078335	chr17	+	213	1	Intergenic	novelGene_2397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCACATTAAAGTTGGGGG	NA	False	NA	NA	False	NA	NA	NA	80516938	80517151	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_80516900_80517200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078339	chr17	-	194	1	Intergenic	novelGene_2398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTTTCTTCATTTATTT	NA	False	NA	1	True	NA	NA	NA	80521609	80521415	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_80521400_80521600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078347	chr17	+	1097	3	FSM	ENSMUSG00000055760.13	ENSMUST00000069486.13	1134	3	15	22	15	-22	multi-exon	FALSE	canonical	3	317	junction_1	34	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTTTCGGGTTCTTTTGA	NA	False	NA	17	True	AATAAA	-36	NA	80531884	80535904	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_80532100_80533049_80533194_80535166
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078351	chr17	+	1101	3	NNC	ENSMUSG00000055760.13	novel	1134	3	NA	NA	15	-22	at_least_one_novel_splicesite	FALSE	canonical	3	145	junction_1	120	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTTTCGGGTTCTTTTGA	NA	False	NA	17	True	AATAAA	-36	NA	80531884	80535904	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_+_80532104_80533049_80533194_80535166
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078359	chr17	-	161	1	Intergenic	novelGene_2399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAAAAAAGAAGAAGCAGC	NA	False	NA	NA	False	NA	NA	NA	80532370	80532209	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_80532200_80532400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078362	chr17	+	628	1	ISM	ENSMUSG00000055760.13	ENSMUST00000069486.13	1134	3	3407	22	3407	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTTTCGGGTTCTTTTGA	NA	False	NA	17	True	AATAAA	-36	NA	80535276	80535904	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr17_+_80535300_80535900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078365	chr17	+	3767	3	Antisense	novelGene_ENSMUSG00000035051.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGCCTTGGGCTTGTGTA	NA	False	NA	NA	False	ATTAAA	-20	NA	80540175	80553794	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr17_+_80540458_80549334_80549558_80550532
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078378	chr17	+	203	1	Intergenic	novelGene_2400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACAGTGCAGAGAGCTGG	NA	False	NA	NA	False	NA	NA	NA	80584096	80584299	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_80584100_80584300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078387	chr17	+	628	5	FSM	ENSMUSG00000045257.11	ENSMUST00000061703.10	644	5	19	-3	19	0	multi-exon	FALSE	canonical	3	50	junction_3	10.1242283656583	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTGAATTATGTATTG	NA	False	NA	15	True	AATAAA	-18	NA	80597659	80604905	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_80597767_80599753_80599808_80601898_80602006_80602941_80603079_80604682
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078392	chr17	-	188	1	Intergenic	novelGene_2401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	80687044	80686856	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_80686900_80687000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078407	chr17	+	227	1	Intergenic	novelGene_2402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTTTCTTTGTTTCCTT	NA	False	NA	NA	False	AAGAAA	-15	NA	80797185	80797412	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_80797200_80797400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078418	chr17	-	4327	34	FSM	ENSMUSG00000024242.16	ENSMUST00000025089.9	4220	34	-103	-4	-103	-1	multi-exon	TRUE	canonical	3	139	junction_19	37.8671982269756	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGTAGTTGCTGGTCAG	NA	False	NA	0	True	AATAAA	-19	NA	81035625	80887941	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078445	chr17	-	177	1	Intergenic	novelGene_2403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACCCAAAAAAGATTATCAA	NA	False	NA	NA	False	NA	NA	NA	80944463	80944286	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_80944300_80944500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078459	chr17	-	205	1	Intergenic	novelGene_2404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGATAGATACCACTTAC	5392	False	NA	NA	False	NA	NA	NA	81556564	81556359	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_81556400_81556600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078462	chr17	+	196	1	Intergenic	novelGene_2405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAATTAGTCTGAACAG	NA	False	NA	NA	False	NA	NA	NA	82023648	82023844	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_82023600_82023800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078473	chr17	+	161	1	Intergenic	novelGene_2406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGGTAGACTTTGAA	NA	False	NA	6	True	NA	NA	NA	83605386	83605547	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_83605400_83605500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078494	chr17	+	5472	24	FSM	ENSMUSG00000032624.17	ENSMUST00000096766.12	5441	24	-27	-4	-27	0	multi-exon	FALSE	canonical	3	134	junction_6	101.418055237548	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658332	83787790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078511	chr17	+	5252	22	FSM	ENSMUSG00000032624.17	ENSMUST00000112363.10	5081	22	-74	-97	-14	0	multi-exon	FALSE	canonical	3	110	junction_3	90.7300948604083	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658345	83787790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_83658669_83717454_83717638_83729034_83729165_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078543	chr17	-	1074	3	FSM	ENSMUSG00000024248.15	ENSMUST00000025095.9	1076	3	0	2	0	-2	multi-exon	TRUE	canonical	0	0	junction_1	644	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTGTTTGTTTTTTGTT	9947	False	NA	-25	True	AATAAA	-21	NA	83821759	83809348	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_83810167_83811528_83811658_83821632
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078550	chr17	+	191	1	Intergenic	novelGene_2407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATGTATTACAGCCATC	NA	False	NA	NA	False	NA	NA	NA	83963495	83963686	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_83963500_83963700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078566	chr17	+	1738	14	FSM	ENSMUSG00000055817.19	ENSMUST00000112350.8	1723	14	-11	-4	-11	2	multi-exon	FALSE	canonical	3	649	junction_11	147.297388673592	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTGTTTTTTTTTTTTT	NA	False	NA	14	True	AATAAA	-19	NA	84013580	84100306	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096349_84096472_84099081_84099231_84099970
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078570	chr17	+	1734	14	FSM	ENSMUSG00000055817.19	ENSMUST00000112349.9	1728	14	-4	-2	-4	2	multi-exon	FALSE	canonical	3	262	junction_11	233.064406873892	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTGTTTTTTTTTTTTT	NA	False	NA	14	True	AATAAA	-19	NA	84013587	84100306	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096346_84096472_84099081_84099231_84099970
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078590	chr17	+	190	1	Intergenic	novelGene_2408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCATAGTAGAAAATGTAT	NA	False	NA	NA	False	NA	NA	NA	84071807	84071997	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_84071800_84072000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078602	chr17	-	3537	2	FSM	ENSMUSG00000045817.9	ENSMUST00000060366.7	3530	2	0	-7	0	7	multi-exon	FALSE	canonical	3	151	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTGAGTAATGGTTGGG	NA	False	NA	NA	False	AATAAA	-17	NA	84495375	84491351	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_84494585_84495071
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078614	chr17	-	6473	38	FSM	ENSMUSG00000024251.11	ENSMUST00000047524.10	7784	38	-80	1391	9	70	multi-exon	TRUE	canonical	2	39	junction_31	15.529655412283	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGGGTATGTTTGATTC	NA	False	NA	-47	True	TATAAA	-17	NA	84773624	84498894	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771930_84773521
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078615	chr17	-	2589	13	NNC	ENSMUSG00000024251.11	novel	2556	13	NA	NA	13772	70	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_12	23.3789732214417	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGGGTATGTTTGATTC	NA	False	NA	-47	True	TATAAA	-17	NA	84662436	84498894	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84662339
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078625	chr17	+	202	1	Intergenic	novelGene_2409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGTAAGCCAGCAT	9527	False	NA	NA	False	NA	NA	NA	84521761	84521963	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_84521800_84522000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078628	chr17	+	2398	1	Intergenic	novelGene_2410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCGTGGTGGCGCACA	5653	False	NA	NA	False	NA	NA	NA	84632175	84634573	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_84632200_84634600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078646	chr17	+	270	1	Intergenic	novelGene_2411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGATTAATTCTAGATGAA	NA	False	NA	NA	False	NA	NA	NA	85136480	85136750	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_85136500_85136800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078653	chr17	+	198	1	Intergenic	novelGene_2412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAATTAGAGCTGGCTTA	NA	False	NA	NA	False	NA	NA	NA	85218646	85218844	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_85218600_85218800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078659	chr17	+	2794	6	FSM	ENSMUSG00000061130.14	ENSMUST00000080217.14	2670	6	-34	-90	-34	90	multi-exon	FALSE	canonical	3	718	junction_5	336.634519917373	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTAGTTCTGCTGCTTT	NA	False	NA	96	True	ATTAAA	-32	NA	85265392	85322209	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85320993
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078660	chr17	+	3366	6	FSM	ENSMUSG00000061130.14	ENSMUST00000112304.10	3323	6	-44	1	-34	-1	multi-exon	FALSE	canonical	3	708	junction_5	340.544857544494	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATTGGCATACTTGTGG	NA	False	NA	18	True	AATAAA	-30	NA	85265392	85324624	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85322836
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078682	chr17	+	1892	7	NIC	ENSMUSG00000061130.14	novel	1307	7	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	715.729639365778	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTGGTTTTATTCCAG	NA	False	NA	12	True	AATAAA	-20	NA	85265423	85331420	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85330459_85330508_85331123
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078689	chr17	+	1838	6	FSM	ENSMUSG00000061130.14	ENSMUST00000234332.2	1290	6	-374	-174	3	1	multi-exon	FALSE	canonical	3	54	junction_5	598.858046618729	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTGGTTTTATTCCAG	NA	False	NA	12	True	AATAAA	-20	NA	85265429	85331420	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85331123
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078696	chr17	+	1646	1	ISM	ENSMUSG00000061130.14	ENSMUST00000112304.10	3323	6	57474	69	21803	-69	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACATATTACTCTTTGG	NA	False	NA	30	True	AATAAA	-19	NA	85322910	85324556	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr17_+_85322900_85324600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078699	chr17	-	183	1	Intergenic	novelGene_2413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATAACCCATGGGGCTG	NA	False	NA	NA	False	NA	NA	NA	85349443	85349260	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_85349300_85349400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078700	chr17	-	4989	15	FSM	ENSMUSG00000024127.16	ENSMUST00000171795.9	2734	15	-34	-2221	-17	1161	multi-exon	FALSE	canonical	3	148	junction_9	21.6455679584736	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCTGAAAGTCTTTT	NA	False	NA	1	True	ATTAAA	-15	NA	85397686	85369736	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767_85396304_85397533
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078723	chr17	-	182	1	Intergenic	novelGene_2414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTATTTTTTTCTGGATA	NA	False	NA	NA	False	NA	NA	NA	85468051	85467869	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_85467900_85468100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078734	chr17	-	179	1	Intergenic	novelGene_2415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAGAGGAAGT	NA	False	NA	NA	False	NA	NA	NA	85655800	85655621	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_85655600_85655800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078736	chr17	+	1046	8	ISM	ENSMUSG00000071037.7	ENSMUST00000095188.7	1595	11	301021	-1	299490	1	3prime_fragment	TRUE	canonical	3	62	junction_3	5.28764443523479	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGTTTCAATCTATCG	7751	False	NA	11	True	AATAAA	-27	NA	85699000	85766017	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr17_+_85699062_85700885_85700941_85702029_85702094_85709853_85709921_85738898_85738974_85746954_85747019_85759623_85759756_85765489
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078746	chr17	-	3534	21	FSM	ENSMUSG00000024135.11	ENSMUST00000095187.4	3530	21	-4	0	-4	0	multi-exon	FALSE	canonical	3	77	junction_9	11.0027269347194	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTGTGCTGTTCATTG	NA	False	NA	-1	True	AATAAA	-15	NA	86452607	86292092	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_86292912_86295752_86295938_86307748_86307902_86308858_86309036_86311274_86311382_86358513_86358597_86365103_86365196_86405939_86406048_86406632_86406724_86410270_86410429_86416654_86416763_86422620_86422725_86427341_86427478_86428077_86428175_86433538_86433678_86435143_86435262_86437541_86437709_86443591_86443964_86446496_86446678_86449787_86449868_86452548
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078772	chr17	+	1175	5	FSM	ENSMUSG00000024146.10	ENSMUST00000024959.10	1184	5	11	-2	11	2	multi-exon	FALSE	canonical	3	592	junction_4	35.4427355039083	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTCTTCAATGATGT	NA	False	NA	6	True	AATAAA	-16	NA	87332988	87343240	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_87333104_87335126_87335193_87338435_87338491_87341683_87341788_87342405
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078787	chr17	+	3444	2	FSM	ENSMUSG00000037104.10	ENSMUST00000234803.2	978	2	-80	-2386	-68	-1211	multi-exon	FALSE	canonical	3	48	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCCGTTTTATACATT	NA	False	NA	7	True	AATAAA	-21	NA	87415038	87444056	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_87415476_87441049
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078794	chr17	+	189	1	Intergenic	novelGene_2416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTGCCATTATTACAGAGA	NA	False	NA	NA	False	NA	NA	NA	87550091	87550280	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_87550100_87550300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078802	chr17	-	1940	5	FSM	ENSMUSG00000024150.13	ENSMUST00000151155.8	603	5	-25	-1312	15	0	multi-exon	FALSE	canonical	3	42	junction_4	129.331695651143	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGTTGACGTTGACTC	NA	False	NA	-2	True	AATAAA	-17	NA	87573348	87562085	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_87563486_87564574_87564735_87565355_87565518_87566177_87566310_87573262
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078805	chr17	-	1823	4	FSM	ENSMUSG00000024150.13	ENSMUST00000024963.11	2038	4	0	215	0	0	multi-exon	FALSE	canonical	3	165	junction_3	69.8108555710038	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGTTGACGTTGACTC	NA	False	NA	-2	True	AATAAA	-17	NA	87573363	87562085	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_87563486_87564574_87564735_87565355_87565518_87573262
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078819	chr17	-	1760	4	NNC	ENSMUSG00000024150.13	novel	2017	5	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	147.196769288218	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGTTGACGTTGACTC	NA	False	NA	-2	True	AATAAA	-17	NA	87573348	87562085	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_-_87563486_87564574_87564735_87565355_87565518_87573310
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078827	chr17	+	4628	20	FSM	ENSMUSG00000036918.17	ENSMUST00000041110.12	4614	20	-14	0	-14	0	multi-exon	FALSE	canonical	3	58	junction_15	8.33807805830403	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAGTGTCCAGTTACTT	NA	False	NA	13	True	AATAAA	-28	NA	87590299	87689197	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_87590839_87597616_87597781_87600238_87600408_87614356_87614488_87616156_87616273_87628830_87628910_87629865_87630024_87630551_87630616_87636750_87636889_87637452_87637537_87641694_87641800_87647318_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87666541_87666659_87669276_87669372_87670883_87671019_87677886_87678090_87687276
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078840	chr17	-	1205	6	FSM	ENSMUSG00000036438.15	ENSMUST00000040440.7	1205	6	5	-5	5	5	multi-exon	FALSE	canonical	3	6557	junction_1	335.908082665482	1813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGAATCTGAGTGATTT	NA	False	NA	0	True	AATAAA	-26	NA	87754358	87740834	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743363_87750123_87750155_87754220
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078848	chr17	-	1102	5	FSM	ENSMUSG00000036438.15	ENSMUST00000234406.2	842	5	-7	-253	-7	0	multi-exon	FALSE	canonical	3	65	junction_4	3004.56365384393	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGCTCTGAATCTGAGT	NA	False	NA	-5	True	AATAAA	-21	NA	87754291	87740839	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743363_87754220
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078866	chr17	+	1545	9	FSM	ENSMUSG00000045394.10	ENSMUST00000234623.2	1745	9	-25	225	-25	-202	multi-exon	FALSE	canonical	3	196	junction_4	21.0535032714273	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTAAGTTTGTTTGAAT	NA	False	NA	27	True	AATAAA	-35	NA	87944084	87958332	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_87944323_87947323_87947432_87947715_87947957_87948861_87948928_87949529_87949594_87950969_87951072_87953564_87953769_87957041_87957087_87957855
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078874	chr17	+	3128	16	FSM	ENSMUSG00000024151.14	ENSMUST00000024967.14	3283	16	162	-7	-48	7	multi-exon	FALSE	canonical	3	1624	junction_8	132.693531618287	2026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACCTTGTATTTCTTTTC	4823	False	NA	26	True	AATAAA	-23	NA	87979919	88031148	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078885	chr17	+	3080	16	NNC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_15	444.352892792804	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	4860	False	NA	19	True	AATAAA	-16	NA	87979956	88031141	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030762
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078910	chr17	+	146	1	Intergenic	novelGene_2417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAAATGGGGGCAGG	NA	False	NA	NA	False	NA	NA	NA	88264466	88264612	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_88264500_88264600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078914	chr17	+	212	1	Intergenic	novelGene_2418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTTCATATGGCTACA	NA	False	NA	NA	False	NA	NA	NA	88267144	88267356	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_88267100_88267400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078927	chr17	+	4246	10	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_9	833.297999250902	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTCCATTTTCTTTC	NA	False	NA	31	True	AATAAA	-20	NA	88282489	88298320	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298156
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078946	chr17	+	203	1	Intergenic	novelGene_2419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGAACCCTGGGCCCTCT	NA	False	NA	NA	False	NA	NA	NA	88398916	88399119	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_88398900_88399100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078951	chr17	-	172	1	Intergenic	novelGene_2420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGGAGGAGGAGGAGGA	NA	False	NA	NA	False	NA	NA	NA	88410754	88410582	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_88410600_88410800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078956	chr17	+	5100	6	FSM	ENSMUSG00000034998.19	ENSMUST00000112238.9	5085	6	-15	0	-15	0	multi-exon	FALSE	canonical	3	257	junction_4	10.9288608738514	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTGTTATTTGTGAG	NA	False	NA	15	True	AATAAA	-19	NA	88748123	88797961	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_88748313_88770140_88770692_88783283_88783379_88786703_88786769_88791828_88791898_88793830
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078983	chr17	+	3038	22	FSM	ENSMUSG00000034709.9	ENSMUST00000038551.8	3141	22	103	0	5	0	multi-exon	FALSE	canonical	3	56	junction_5	9.91871727497827	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCGGTCTGTGACAGTG	NA	False	NA	16	True	AATAAA	-17	NA	88837648	88895795	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_88837747_88850272_88850342_88852748_88852896_88854995_88855098_88856921_88857087_88857218_88857278_88858089_88858185_88862277_88862331_88863009_88863160_88866016_88866119_88866204_88866294_88869536_88869674_88873068_88873162_88876507_88876636_88880030_88880184_88882619_88882713_88884565_88884809_88886209_88886243_88887862_88887980_88889842_88889942_88891280_88891410_88895111
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078991	chr17	-	188	1	Intergenic	novelGene_2421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATCTCAAAAGCTAGGTT	NA	False	NA	NA	False	NA	NA	NA	88949879	88949691	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_-_88949700_88949900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000078997	chr17	-	1884	1	FSM	ENSMUSG00000066878.6	ENSMUST00000086423.6	1988	1	7	97	7	-97	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCTGTCCTCTGAATTT	NA	False	NA	NA	False	TATAAA	-15	NA	90217870	90215986	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_-_90216000_90217900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079004	chr17	+	203	1	Intergenic	novelGene_2422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGCCAGGGAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	92619506	92619709	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_92619500_92619700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079013	chr17	+	179	1	Intergenic	novelGene_2423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGCACTGGAAATCT	NA	False	NA	NA	False	NA	NA	NA	94941371	94941550	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_94941400_94941600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079019	chr17	+	4582	2	Intergenic	novelGene_2424	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATATTTTGGAGAAATT	NA	False	NA	NA	False	NA	NA	NA	94990701	94995332	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_94992676_94992724
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079025	chr17	+	2631	1	Intergenic	novelGene_2425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATATTTTGGAGAAATT	NA	False	NA	NA	False	NA	NA	NA	94992701	94995332	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr17_+_94992700_94995300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079045	chr17	+	355	4	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	3	19018	at_least_one_novel_splicesite	FALSE	canonical	3	134	junction_3	26.8493740874697	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCATGGTTCATTTTGA	NA	False	NA	11	True	AATAAA	-16	NA	95057542	95101578	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr17_+_95057661_95063861_95063952_95092912_95092936_95101454
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079060	chr17	+	3108	4	FSM	ENSMUSG00000095193.3	ENSMUST00000234295.2	3079	4	-29	0	-29	0	multi-exon	FALSE	canonical	3	81	junction_3	17.6635217326557	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTCGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	95172316	95185749	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr17_+_95172441_95181413_95181541_95181729_95181791_95182953
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079069	chr18	+	215	1	Intergenic	novelGene_2426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGTCGAGAGACAGTGAA	9363	False	NA	NA	False	NA	NA	NA	3347575	3347790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_3347600_3347800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079080	chr18	+	3846	21	FSM	ENSMUSG00000024231.16	ENSMUST00000162301.8	3828	21	-18	0	-11	0	multi-exon	FALSE	canonical	3	782	junction_1	80.8420682565705	363	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAATTGTCAAGAAATGT	191	False	NA	5	True	ATTAAA	-17	NA	3383213	3436377	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079100	chr18	+	6944	1	FSM	ENSMUSG00000096528.2	ENSMUST00000179907.2	2686	1	0	-4258	0	4258	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	3471629	3478573	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_3471600_3478600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079105	chr18	+	1440	3	FSM	ENSMUSG00000024232.3	ENSMUST00000025075.3	5074	3	-13	3647	-13	-3647	multi-exon	FALSE	canonical	3	117	junction_2	19.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGGTGTCTTTCATGA	NA	False	NA	24	True	AATATA	-19	NA	3507909	3512757	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_3508286_3511256_3511545_3511981
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079116	chr18	+	2654	9	FSM	ENSMUSG00000024234.8	ENSMUST00000025077.7	2651	9	-3	0	-3	0	multi-exon	FALSE	canonical	3	181	junction_2	18.3711730708738	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGATAACAGTATTTCTA	-15	True	NA	17	True	AATAAA	-18	NA	4375588	4397330	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079127	chr18	+	2066	9	FSM	ENSMUSG00000024234.8	ENSMUST00000234422.2	2626	9	17	543	9	0	multi-exon	FALSE	canonical	3	50	junction_2	58.5340445809103	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTAGTATCTATTTTCT	9	True	NA	18	True	AATAAA	-20	NA	4375612	4396785	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_4375779_4379568_4379742_4380672_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079147	chr18	+	5218	8	FSM	ENSMUSG00000024238.16	ENSMUST00000025081.13	5801	8	27	556	0	-556	multi-exon	FALSE	canonical	3	32	junction_5	9.45666809339164	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGTCGTTCTTTGGAT	5	True	NA	NA	False	AATAAA	-18	NA	5591890	5774911	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_5591968_5705042_5705244_5748693_5748856_5758964_5759168_5761327_5761434_5766220_5768026_5770383_5770565_5772428
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079151	chr18	+	210	1	Intergenic	novelGene_2427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGAAGGCCATCCTCAG	NA	False	NA	NA	False	NA	NA	NA	5951486	5951696	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_5951500_5951700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079189	chr18	-	6013	26	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	3	-18	intron_retention	TRUE	canonical	0	0	junction_8	276.15437421848	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACATTTGAACCTTACT	-2	True	NA	-18	True	AATAAA	-24	NA	6241520	6201019	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr18_-_6203708_6208184_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079197	chr18	+	200	1	Intergenic	novelGene_2428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGAGGAATTGGC	NA	False	NA	NA	False	NA	NA	NA	6243191	6243391	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_6243200_6243400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079206	chr18	+	502	1	FSM	ENSMUSG00000073640.4	ENSMUST00000097682.4	411	1	-42	-49	-42	49	mono-exon	FALSE	NA	NA	NA	NA	NA	566	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTAAATAATTTAAAAAATG	-9	True	NA	NA	False	ATTAAA	-25	NA	6332589	6333091	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_6332600_6333100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079220	chr18	-	182	1	Intergenic	novelGene_2429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCTTCTGAGTCTACAAT	NA	False	NA	NA	False	NA	NA	NA	6759878	6759696	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_6759700_6759900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079228	chr18	+	2280	7	FSM	ENSMUSG00000073639.7	ENSMUST00000234810.2	6515	7	38	4197	-20	992	multi-exon	FALSE	canonical	3	943	junction_6	99.6015673683011	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGCTGTCGTTATTACC	-13	True	NA	10	True	NA	NA	NA	6765182	6790232	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_6765333_6770053_6770110_6778494_6778557_6783119_6783193_6784569_6784689_6784938_6785006_6788479
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079235	chr18	-	200	1	Intergenic	novelGene_2430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCTGAGAGATGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	7010007	7009807	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_7009800_7010000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079237	chr18	+	184	1	Intergenic	novelGene_2431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTATTAAAAAAAAAGGGCT	NA	False	NA	NA	False	NA	NA	NA	7264095	7264279	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_7264100_7264300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079242	chr18	-	4996	17	NIC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_16	10.4634781502137	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCTTTCAAGATTATTG	-33	True	NA	NA	False	ATTAAA	-20	NA	7626877	7347958	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7626728
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079261	chr18	+	3530	14	FSM	ENSMUSG00000024283.16	ENSMUST00000074919.11	3070	14	-5	-455	0	3	multi-exon	TRUE	canonical	3	146	junction_1	117.532571338518	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACCTTGGCTTTTTTTTT	2	True	NA	NA	False	AATAAA	-25	NA	7868844	7927522	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079296	chr18	+	3679	1	FSM	ENSMUSG00000036904.7	ENSMUST00000041080.7	5974	1	-3	2298	-3	-2298	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAATCGCGTTTTTGCAC	-3	True	NA	NA	False	AGTAAA	-20	NA	9212159	9215838	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_9212200_9215800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079312	chr18	+	5194	1	Intergenic	novelGene_2432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTTCTCGTTGGTGATT	NA	False	NA	NA	False	NA	NA	NA	9592761	9597955	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_9592800_9598000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079330	chr18	+	203	1	NIC	ENSMUSG00000117453.2	novel	1103	2	NA	NA	723	-380	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGACACAGAGGAAGAGAT	NA	False	NA	NA	False	NA	NA	NA	9909915	9910118	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr18_+_9909900_9910100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079346	chr18	+	1983	20	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	-1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	237.141378171329	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTACAGTTGGCTGGTG	9	True	NA	16	True	AATAAA	-16	NA	9958175	9993727	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079347	chr18	+	2301	20	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	-1	4	intron_retention	FALSE	canonical	0	0	junction_16	182.47716815401	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTACAGTTGGCTGGTGCT	9	True	NA	18	True	AATAAA	-18	NA	9958175	9993729	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9962372_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079374	chr18	-	181	1	Intergenic	novelGene_2433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTAATTCTCTGCTTAA	3490	False	NA	NA	False	NA	NA	NA	10026591	10026410	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_10026400_10026600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079384	chr18	-	6610	33	FSM	ENSMUSG00000024290.10	ENSMUST00000067947.7	6440	33	-170	0	-170	0	multi-exon	TRUE	canonical	3	139	junction_22	28.5588755906111	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGACTTGGGCTCTAAAAC	-12	True	NA	NA	False	ATTAAA	-21	NA	10182215	10064400	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_10066052_10067470_10067679_10070218_10070481_10070621_10070701_10072831_10072921_10073114_10073186_10079114_10079275_10080350_10080540_10083121_10083211_10084317_10084412_10090812_10090979_10092128_10092224_10093907_10093978_10095412_10095598_10097482_10097644_10099256_10099408_10100921_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116863_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079393	chr18	-	198	1	Intergenic	novelGene_2434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGAAATGACAGGACTTT	NA	False	NA	NA	False	NA	NA	NA	10190631	10190433	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_10190400_10190600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079409	chr18	-	178	1	Intergenic	novelGene_2435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGGAGGTGGTTAATGAG	2774	False	NA	NA	False	NA	NA	NA	10592167	10591989	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_10592000_10592200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079434	chr18	+	3381	19	FSM	ENSMUSG00000041238.17	ENSMUST00000047322.8	3209	19	-49	-123	-3	123	multi-exon	FALSE	canonical	3	177	junction_1	21.3625378803961	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTTGTAGTCTATAATT	3242	False	NA	8	True	NA	NA	NA	11790436	11876058	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_11790750_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079446	chr18	-	199	1	Intergenic	novelGene_2436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTAGGAACTGAACTTAG	NA	False	NA	NA	False	NA	NA	NA	11832429	11832230	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_11832200_11832400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079453	chr18	+	3073	10	FSM	ENSMUSG00000040957.16	ENSMUST00000171109.9	3396	10	323	0	269	0	multi-exon	FALSE	canonical	3	22	junction_4	6.21428064627092	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTGTGTGTGAACATG	NA	False	NA	NA	False	ATTAAA	-25	NA	11972599	12078683	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_11973591_12015770_12015843_12021793_12021887_12038981_12039060_12056416_12056514_12057871_12058029_12059317_12059422_12072775_12072883_12074236_12074445_12077517
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079462	chr18	+	3110	13	FSM	ENSMUSG00000024404.8	ENSMUST00000025270.8	3790	13	-2	682	-2	4	multi-exon	FALSE	canonical	3	378	junction_8	18.23058327829	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTGTGGTTAATTCT	5503	False	NA	14	True	ATTAAA	-26	NA	12261795	12289762	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_12262031_12268908_12269025_12269749_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12275992_12276121_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079473	chr18	-	82	1	Intergenic	novelGene_2437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCCGTTTCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	12292223	12292141	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_12292100_12292200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079494	chr18	-	5196	25	FSM	ENSMUSG00000024413.15	ENSMUST00000025279.6	5224	25	28	0	-14	0	multi-exon	FALSE	canonical	3	21	junction_11	10.5137971521024	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGGTCTTTTATTGCA	NA	False	NA	-26	True	AATAAA	-16	NA	12369429	12322749	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_12324060_12324740_12324904_12326350_12326465_12327119_12327352_12328065_12328267_12329540_12329671_12330238_12330355_12331015_12331207_12331564_12331655_12332429_12332571_12332655_12332784_12333834_12333950_12334620_12334804_12335177_12335368_12337827_12337931_12341363_12341465_12343438_12343666_12344542_12344914_12345251_12345326_12346313_12346564_12347387_12347556_12352234_12352411_12354862_12354970_12356089_12356213_12369237
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079506	chr18	+	4868	32	NNC	ENSMUSG00000024421.17	novel	10548	75	NA	NA	19796	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	16.1479888600645	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGATGTTTTATAAGCAA	4998	False	NA	NA	False	AATAAA	-19	NA	12657051	12716070	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr18_+_12657178_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079526	chr18	-	2761	14	FSM	ENSMUSG00000044252.19	ENSMUST00000234871.2	2818	14	57	0	-3	0	multi-exon	TRUE	canonical	3	45	junction_13	91.3749671156418	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12996440	12888384	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996128
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079527	chr18	-	2598	13	NIC	ENSMUSG00000044252.19	novel	2818	14	NA	NA	-3	0	intron_retention	TRUE	canonical	3	22	junction_12	99.8294030945904	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12996440	12888384	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12996128
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079528	chr18	-	3957	28	FSM	ENSMUSG00000044252.19	ENSMUST00000074352.11	3956	28	-15	14	-15	0	multi-exon	FALSE	canonical	3	91	junction_13	124.793898676083	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	13074913	12888384	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13015252_13015335_13025223_13025347_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13074688
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079534	chr18	-	2484	14	NNC	ENSMUSG00000044252.19	novel	2818	14	NA	NA	-3	0	intron_retention	FALSE	canonical	3	33	junction_13	94.3034884243106	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12996440	12888384	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996405
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079561	chr18	+	3467	11	NIC	ENSMUSG00000024423.7	novel	591	6	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	2	27	junction_1	239.691051147096	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTATGGCTACATTGCA	NA	False	NA	16	True	NA	NA	NA	13107378	13126007	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr18_+_13107533_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079572	chr18	-	2958	11	FSM	ENSMUSG00000037013.18	ENSMUST00000040924.9	3098	11	139	1	3	-1	multi-exon	FALSE	canonical	3	178	junction_3	289.216597034126	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTGTTTCTTTAAATTA	NA	False	NA	-14	True	AATAAA	-22	NA	14815832	14758680	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14770448_14770542_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079586	chr18	-	2755	9	NIC	ENSMUSG00000037013.18	novel	2911	10	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_3	296.915812984085	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCATTTGTTTCTTTA	NA	False	NA	-19	True	AATAAA	-17	NA	14815832	14758685	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr18_-_14760369_14766599_14766734_14769552_14769676_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079588	chr18	-	6489	9	NIC	ENSMUSG00000037013.18	novel	2911	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	797	junction_3	71.3791592483408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCATTTGTTTCTTTA	NA	False	NA	-19	True	AATAAA	-17	NA	14815823	14758685	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr18_-_14760369_14766599_14766734_14769552_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079592	chr18	-	2722	10	FSM	ENSMUSG00000037013.18	ENSMUST00000040964.13	4153	10	0	1431	0	0	multi-exon	FALSE	canonical	3	40	junction_6	374.482193942845	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCATTTGTTTCTTTA	NA	False	NA	-19	True	AATAAA	-17	NA	14815823	14758685	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14770448_14770542_14773313_14773419_14774012_14774181_14788083_14788238_14803365_14803451_14812443_14812521_14815723
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079596	chr18	-	2636	9	FSM	ENSMUSG00000037013.18	ENSMUST00000234524.2	2603	9	-7	-26	5	0	multi-exon	FALSE	canonical	3	40	junction_5	300.413048984228	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCATTTGTTTCTTTA	NA	False	NA	-19	True	AATAAA	-17	NA	14815830	14758685	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14788083_14788238_14803365_14803451_14812443_14812521_14815723
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079608	chr18	+	1685	7	FSM	ENSMUSG00000036743.5	ENSMUST00000040860.3	1692	7	10	-3	10	0	multi-exon	TRUE	canonical	3	86	junction_2	7.18795288428261	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTGTCTCCTTCAAAGG	NA	False	NA	13	True	NA	NA	NA	14839217	14895358	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_14839390_14854223_14854351_14859560_14859686_14864035_14864159_14890338_14890459_14890678_14890742_14894403
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079632	chr18	+	606	1	FSM	ENSMUSG00000058064.7	ENSMUST00000079733.7	534	1	-21	-51	-21	51	mono-exon	FALSE	NA	NA	NA	NA	NA	492	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGAAAAATGCTATCCAA	NA	False	NA	NA	False	AATAAA	-26	NA	15965829	15966435	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_15965800_15966400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079634	chr18	+	212	1	Intergenic	novelGene_2438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCCTAAAAAGGGAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	16603156	16603368	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_16603200_16603400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079648	chr18	+	4206	1	Intergenic	novelGene_2439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTTTGTTGCGTCT	NA	False	NA	NA	False	NA	NA	NA	16983731	16987937	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_16983700_16987900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079651	chr18	+	188	1	Intergenic	novelGene_2440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGAAAAAGATGAAATGTAC	NA	False	NA	NA	False	NA	NA	NA	17170562	17170750	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_17170600_17170800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079662	chr18	+	5789	15	FSM	ENSMUSG00000044393.16	ENSMUST00000059787.15	5766	15	-18	-5	-18	5	multi-exon	FALSE	canonical	3	147	junction_4	15.0483913303932	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCTCCATGTCTTCCTA	NA	False	NA	15	True	AATAAA	-24	NA	20691112	20737583	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_20691402_20706545_20706582_20707996_20708132_20712096_20712259_20712390_20712536_20713568_20713736_20715764_20715903_20715993_20716180_20723004_20723271_20724890_20725034_20725328_20725557_20727120_20727349_20729016_20729139_20731395_20731726_20734369
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079674	chr18	+	189	1	Intergenic	novelGene_2441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCCTCCCTACGTTGC	249	False	NA	NA	False	NA	NA	NA	20782851	20783040	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_20782900_20783000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079692	chr18	+	228	1	Intergenic	novelGene_2442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGATTTGATCTTCATAAA	NA	False	NA	NA	False	TTTAAA	-5	NA	20850904	20851132	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_20850900_20851100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079697	chr18	+	643	2	Intergenic	novelGene_2443	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	False	NA	15	True	NA	NA	NA	20895474	20911828	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_20895821_20911531
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079716	chr18	-	5328	29	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-279	-88	at_least_one_novel_splicesite	TRUE	canonical	3	15	junction_23	38.3663862233171	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTATTAGATGCCTTT	NA	False	NA	-110	True	AATAAA	-19	NA	21029429	20950367	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999264_21000873_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079737	chr18	+	217	1	Intergenic	novelGene_2444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGGCATGGAAAGAGATAG	NA	False	NA	NA	False	NA	NA	NA	21047060	21047277	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_21047100_21047300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079747	chr18	+	4878	6	FSM	ENSMUSG00000033107.7	ENSMUST00000050004.3	1348	6	-37	-3493	-37	3493	multi-exon	FALSE	canonical	3	69	junction_1	22.5335305711289	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACTGTGTCTATTTGG	5304	False	NA	NA	False	AATAAA	-30	NA	21077644	21120412	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_21077815_21107355_21107513_21110785_21110881_21112107_21112199_21114227_21114336_21116155
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079775	chr18	+	2863	6	FSM	ENSMUSG00000024317.16	ENSMUST00000052396.7	2769	6	-94	0	-11	0	multi-exon	FALSE	canonical	3	201	junction_5	108.138799697426	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGTGTCTTAATTAAAA	NA	False	NA	3	True	ATTAAA	-15	NA	21134953	21161281	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21159142
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079786	chr18	+	186	1	Intergenic	novelGene_2445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAGAAATAATATTTTGT	NA	False	NA	NA	False	NA	NA	NA	21173132	21173318	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_21173100_21173300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079801	chr18	-	195	1	Intergenic	novelGene_2446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCCATTAGCTATAGCATA	NA	False	NA	NA	False	NA	NA	NA	21523156	21522961	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_21523000_21523200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079810	chr18	+	2554	7	FSM	ENSMUSG00000024277.15	ENSMUST00000025127.5	4026	7	-16	1488	-16	5	multi-exon	FALSE	canonical	3	115	junction_6	13.0596920161065	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGAAATTTCTTTTTTA	NA	False	NA	NA	False	AATAAA	-23	NA	23937024	24025426	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_23937279_23965909_23966038_23986710_23986857_23991000_23991215_24011000_24011141_24016594_24016754_24023913
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079821	chr18	+	5529	4	NNC	ENSMUSG00000024276.8	novel	5472	4	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	31.5946549628608	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTGTGGATCTCTTT	NA	False	NA	20	True	GATAAA	-22	NA	24087731	24097728	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr18_+_24087948_24089395_24089911_24090111_24090254_24093072
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079825	chr18	+	5822	4	NIC	ENSMUSG00000024276.8	novel	5472	4	NA	NA	-17	-2	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	35.3647658929996	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTGTGGATCTCTTT	NA	False	NA	20	True	GATAAA	-22	NA	24087731	24097728	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr18_+_24088241_24089395_24089911_24090111_24090254_24093072
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079838	chr18	+	191	1	Intergenic	novelGene_2447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTAAACCTTAAGCCGG	NA	False	NA	NA	False	NA	NA	NA	24103594	24103785	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_24103600_24103800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079844	chr18	+	3018	3	FSM	ENSMUSG00000063281.10	ENSMUST00000074941.8	3040	3	17	5	17	-5	multi-exon	FALSE	canonical	3	128	junction_1	18.5	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAGAAAATTTCTTACTG	1076	False	NA	NA	False	AATAAA	-21	NA	24122705	24138428	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_24122789_24123234_24123448_24135706
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079853	chr18	-	3585	4	NIC	ENSMUSG00000051469.15	novel	5732	4	NA	NA	24	1660	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	102.009803450453	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGGAATTGCCTTACTTA	NA	False	NA	NA	False	AATAAA	-31	NA	24153403	24145321	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr18_-_24147743_24150340_24150489_24150724_24151226_24152888
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079854	chr18	-	3167	4	FSM	ENSMUSG00000051469.15	ENSMUST00000066497.12	5732	4	2	2563	2	1660	multi-exon	FALSE	canonical	3	144	junction_3	47.8957200593122	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGGAATTGCCTTACTTA	NA	False	NA	NA	False	AATAAA	-31	NA	24153865	24145321	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_24147743_24150340_24150489_24150724_24151226_24153768
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079878	chr18	-	2481	5	FSM	ENSMUSG00000047989.12	ENSMUST00000153360.8	2498	5	19	-2	19	2	multi-exon	FALSE	canonical	3	634	junction_3	55.0789206502814	224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGGGTGTTTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	24254991	24237811	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_24239716_24244771_24244840_24245717_24245830_24247133_24247245_24254705
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079886	chr18	+	180	1	Intergenic	novelGene_2448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAACTTCTCCTGTACAA	NA	False	NA	NA	False	NA	NA	NA	24327524	24327704	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_24327500_24327700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079912	chr18	+	189	1	Intergenic	novelGene_2449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACCACTTATGCTCAGTA	NA	False	NA	NA	False	NA	NA	NA	24367688	24367877	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_24367700_24367900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079914	chr18	+	186	1	Intergenic	novelGene_2450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATGCTTAGTTGTATAT	NA	False	NA	NA	False	NA	NA	NA	24458398	24458584	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_24458400_24458600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079918	chr18	+	1051	5	FSM	ENSMUSG00000024273.9	ENSMUST00000097646.5	1065	5	-17	31	1	-31	multi-exon	FALSE	canonical	3	162	junction_2	17.066048165876	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGTTTTTATGATAAAGG	342	False	NA	-14	True	AATAAA	-26	NA	24603908	24610824	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_24604038_24604118_24604142_24606006_24606207_24608581_24608782_24610325
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079924	chr18	-	4325	7	FSM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	-24	-2	-24	2	multi-exon	FALSE	canonical	3	196	junction_1	46.8807589054993	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTGTGTGTGTGTTA	NA	False	NA	NA	False	AATAAA	-22	NA	24663285	24618014	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_24621389_24639890_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079939	chr18	-	3104	5	FSM	ENSMUSG00000040446.5	ENSMUST00000234403.2	2950	5	-155	1	-9	-1	multi-exon	FALSE	canonical	3	215	junction_1	46.5886252211846	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGTCTCATGTTTTTG	NA	False	NA	-2	True	AATAAA	-17	NA	24663270	24638484	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_24640067_24640161_24641149_24641226_24641334_24642849_24642980_24662972
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079940	chr18	-	2319	6	ISM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	14	20468	14	-1	5prime_fragment	FALSE	canonical	3	215	junction_1	43.046951111548	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGTCTCATGTTTTTG	NA	False	NA	-2	True	AATAAA	-17	NA	24663247	24638484	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr18_-_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079944	chr18	-	188	1	Intergenic	novelGene_2451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAAGGATTTATTTG	NA	False	NA	NA	False	NA	NA	NA	24679184	24678996	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_24679000_24679200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079957	chr18	+	200	1	Intergenic	novelGene_2452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCACATAAGAGGTTAAG	NA	False	NA	NA	False	NA	NA	NA	24702285	24702485	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_24702300_24702500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079965	chr18	-	3897	10	FSM	ENSMUSG00000024270.12	ENSMUST00000070726.10	3882	10	-15	0	-15	0	multi-exon	FALSE	canonical	3	75	junction_5	10.1153837126587	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTTGTTCTCTTTCTTCT	NA	False	NA	0	True	ATTAAA	-18	NA	24736889	24712937	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_24714135_24715373_24715565_24717076_24717158_24718182_24718561_24722803_24722910_24729322_24729542_24730799_24730970_24732286_24732471_24733871_24734697_24736343
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079977	chr18	+	2779	22	FSM	ENSMUSG00000024271.9	ENSMUST00000234266.2	3466	22	-8	695	-8	2	multi-exon	FALSE	canonical	3	667	junction_5	86.0279973411599	233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCTGATTTTGCCTTA	NA	False	NA	92	True	TTTAAA	-12	NA	24737009	24771869	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000079998	chr18	-	4067	7	FSM	ENSMUSG00000024269.12	ENSMUST00000115817.3	4159	7	92	0	92	0	multi-exon	FALSE	canonical	3	238	junction_5	17.5823459438406	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGGTATCTTCAACAAAAT	NA	False	NA	NA	False	AATAAA	-22	NA	25301972	25269093	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_25272197_25273502_25273664_25274577_25274695_25282170_25282300_25284256_25284345_25291300_25291381_25301583
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080017	chr18	+	3147	25	FSM	ENSMUSG00000033628.16	ENSMUST00000115812.10	3257	25	110	0	-13	0	multi-exon	FALSE	canonical	3	114	junction_11	21.8495089571063	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCCTTGTTTTCCCTGTC	NA	False	NA	12	True	AGTAAA	-23	NA	30405909	30481179	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_30406072_30407321_30407511_30410024_30410169_30415009_30415140_30421803_30421891_30423523_30423620_30426111_30426184_30426671_30426777_30427388_30427482_30431625_30431812_30435972_30436128_30436618_30436710_30438027_30438096_30444272_30444379_30445604_30445722_30449895_30450028_30452553_30452683_30453286_30453357_30455222_30455288_30456574_30456660_30457596_30457672_30466213_30466383_30469146_30469238_30477003_30477130_30480775
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080023	chr18	+	190	1	Intergenic	novelGene_2453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGGAGCCATGCATCCC	NA	False	NA	NA	False	NA	NA	NA	30829389	30829579	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_30829400_30829600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080028	chr18	+	190	1	Intergenic	novelGene_2454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACAAACTTAATACCATAA	NA	False	NA	NA	False	NA	NA	NA	31509890	31510080	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_31509900_31510100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080037	chr18	+	196	1	Intergenic	novelGene_2455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAATAGGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	31659328	31659524	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_31659300_31659500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080049	chr18	+	4067	21	FSM	ENSMUSG00000024260.15	ENSMUST00000235017.2	4030	21	-30	-7	-30	7	multi-exon	FALSE	canonical	3	64	junction_13	32.249767441022	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTTGCCTCTTTCTAAC	6775	False	NA	15	True	AATAAA	-27	NA	31767393	31856121	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_31767543_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815059_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080050	chr18	+	4064	21	FSM	ENSMUSG00000024260.15	ENSMUST00000025109.8	4015	21	-42	-7	-30	7	multi-exon	FALSE	canonical	3	84	junction_13	29.4439722184355	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTTGCCTCTTTCTAAC	6775	False	NA	15	True	AATAAA	-27	NA	31767393	31856121	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_31767543_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815062_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080079	chr18	+	4776	8	FSM	ENSMUSG00000041915.10	ENSMUST00000115808.4	3385	8	-56	-1335	-2	1335	multi-exon	FALSE	canonical	3	74	junction_2	12.315578321287	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTTCTGCCTCTGTGTG	6865	False	NA	10	True	AATAAA	-17	NA	31892876	31917131	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_31893248_31894832_31894944_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31911909_31912007_31913696
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080092	chr18	+	1051	4	FSM	ENSMUSG00000024258.5	ENSMUST00000025106.5	1015	4	-31	-5	-31	5	multi-exon	FALSE	canonical	3	694	junction_1	16.2138486760204	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTATTTATTTGTTAA	NA	False	NA	26	True	AATAAA	-25	NA	31922180	31929759	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_31922298_31924892_31925074_31928340_31928437_31929102
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080101	chr18	+	4614	22	FSM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	-34	-5	-26	5	multi-exon	FALSE	canonical	3	169	junction_7	93.6872299310541	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCCACTGTGCAGTGCTG	5621	False	NA	44	True	AATACA	-27	NA	31937116	32040455	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080137	chr18	+	130	1	Intergenic	novelGene_2456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	32188965	32189095	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_32189000_32189100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080141	chr18	-	854	1	Antisense	novelGene_ENSMUSG00000024384.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCATGATCTTTCTTTC	NA	False	NA	NA	False	AATAAA	-25	NA	32201227	32200373	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr18_-_32200400_32201200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080149	chr18	+	2805	14	FSM	ENSMUSG00000024384.5	ENSMUST00000025243.5	9613	14	0	6808	0	1	multi-exon	FALSE	canonical	3	171	junction_3	17.4029855290822	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTGTCTCATCATTGTC	NA	False	NA	18	True	AATAAA	-19	NA	32200793	32230573	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_32201093_32203159_32203276_32212723_32213631_32216318_32216512_32217231_32217290_32217705_32217804_32219325_32219477_32220122_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32230202
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080164	chr18	+	2682	15	FSM	ENSMUSG00000024382.14	ENSMUST00000025241.7	2708	15	26	0	26	0	multi-exon	FALSE	canonical	3	78	junction_6	14.4393524078881	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTCTCTATTTTATTG	NA	False	NA	NA	False	TATAAA	-24	NA	32373378	32403204	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_32373475_32373682_32373889_32376016_32376254_32377851_32377902_32378541_32378678_32378804_32378973_32379619_32379825_32381215_32381531_32387133_32387319_32390242_32390446_32394354_32394452_32397600_32397719_32398670_32398790_32400216_32400370_32402810
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080183	chr18	-	5120	6	FSM	ENSMUSG00000024378.10	ENSMUST00000025236.9	5097	6	41	-64	0	64	multi-exon	FALSE	canonical	3	38	junction_1	4.66476151587624	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACTGGTCATTGACCTT	NA	False	NA	-16	True	AATAAA	-18	NA	33346874	33332343	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_33336869_33338103_33338219_33339172_33339300_33341229_33341280_33342095_33342211_33346686
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080193	chr18	-	185	1	Intergenic	novelGene_2457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTTAAATTACAAACCTC	NA	False	NA	NA	False	NA	NA	NA	33916469	33916284	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_33916300_33916500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080198	chr18	+	457	3	FSM	ENSMUSG00000087590.3	ENSMUST00000146010.3	430	3	-22	-5	-22	5	multi-exon	FALSE	canonical	3	377	junction_1	24	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTATGTTGTGTGATTGG	NA	False	NA	20	True	AATAAA	-24	NA	33927922	33929044	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_33928178_33928435_33928499_33928905
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080226	chr18	+	226	1	Intergenic	novelGene_2458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGCACTGGGGAGGCAG	NA	False	NA	NA	False	NA	NA	NA	34205227	34205453	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_34205200_34205500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080234	chr18	+	884	5	FSM	ENSMUSG00000014504.17	ENSMUST00000072576.10	876	5	-7	-1	-7	1	multi-exon	FALSE	canonical	3	833	junction_3	511.998291012773	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTAGCTTTCACTTAGG	NA	False	NA	5	True	AATAAA	-15	NA	34464190	34469653	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_34464313_34464802_34464879_34467345_34467418_34467509_34467622_34469151
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080252	chr18	+	193	1	Intergenic	novelGene_2459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAAGCAGATTCCCCGG	NA	False	NA	NA	False	NA	NA	NA	34488953	34489146	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_34489000_34489100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080255	chr18	+	189	1	Intergenic	novelGene_2460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATAAATATTTAGAGATAA	NA	False	NA	NA	False	NA	NA	NA	34525650	34525839	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_34525600_34525800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080264	chr18	+	194	1	Intergenic	novelGene_2461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGAAGGAGCGGG	NA	False	NA	NA	False	NA	NA	NA	34647741	34647935	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_34647700_34647900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080275	chr18	+	202	1	Antisense	novelGene_ENSMUSG00000003778.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAACACATCTCAAACACA	NA	False	NA	NA	False	NA	NA	NA	34732634	34732836	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr18_+_34732600_34732800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080285	chr18	-	3248	22	FSM	ENSMUSG00000003778.15	ENSMUST00000003876.10	4468	22	9	1211	9	4	multi-exon	FALSE	canonical	3	307	junction_21	99.9950565671548	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757645	34732878	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080319	chr18	+	3086	19	FSM	ENSMUSG00000003779.17	ENSMUST00000167161.9	3146	19	30	30	30	0	multi-exon	TRUE	canonical	3	115	junction_1	232.664995218447	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGATTCCAAATTTAGAA	5885	False	NA	23	True	AATAAA	-20	NA	34757695	34765858	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_34757906_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080322	chr18	+	3300	19	FSM	ENSMUSG00000003779.17	ENSMUST00000237407.2	3674	19	-92	466	30	6	multi-exon	FALSE	canonical	3	938	junction_13	99.0044268869321	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCCAAATTTAGAAAAATAT	5885	False	NA	29	True	AATAAA	-26	NA	34757695	34765864	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080333	chr18	+	3510	18	NIC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-42	0	intron_retention	FALSE	canonical	3	938	junction_12	101.336911094492	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGATTCCAAATTTAGAA	6207	False	NA	23	True	AATAAA	-20	NA	34758017	34765858	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080337	chr18	+	3175	19	FSM	ENSMUSG00000003779.17	ENSMUST00000166044.3	3107	19	-68	0	-42	0	multi-exon	FALSE	canonical	3	116	junction_1	232.455445087047	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGATTCCAAATTTAGAA	6207	False	NA	23	True	AATAAA	-20	NA	34758017	34765858	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_34758317_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080340	chr18	+	2819	18	NIC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-33	0	intron_retention	FALSE	canonical	3	10	junction_10	266.201994226384	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGATTCCAAATTTAGAA	6216	False	NA	23	True	AATAAA	-20	NA	34758026	34765858	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080357	chr18	-	4897	16	FSM	ENSMUSG00000024370.18	ENSMUST00000133181.2	4133	16	-29	-735	-29	3	multi-exon	FALSE	canonical	3	906	junction_9	78.8679909722569	351	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACTGTTCTTTCTAGAG	NA	False	NA	NA	False	AATAAA	-17	NA	34784817	34764000	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080375	chr18	+	136	1	Intergenic	novelGene_2462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCTATTTTGATTTACT	NA	False	NA	NA	False	NA	NA	NA	34826846	34826982	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_34826800_34827000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080376	chr18	-	182	1	Intergenic	novelGene_2463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATTCCGGGCTGGCAAG	1082	False	NA	NA	False	NA	NA	NA	34861708	34861526	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_34861500_34861700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080388	chr18	-	1960	15	FSM	ENSMUSG00000044201.11	ENSMUST00000060710.9	1945	15	-15	0	-15	0	multi-exon	FALSE	canonical	3	155	junction_14	20.2922524674833	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTAGATGTCTCTAAGCC	2777	False	NA	-15	True	AATAAA	-22	NA	34884601	34866045	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080396	chr18	+	4282	5	FSM	ENSMUSG00000034300.18	ENSMUST00000097622.4	4256	5	-4	-22	-4	0	multi-exon	FALSE	canonical	3	31	junction_2	5.02493781056044	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTACGATAGTGTCT	5083	False	NA	26	True	AATAAA	-33	NA	34892604	34906813	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_34892651_34895547_34895778_34896125_34896184_34901220_34902006_34903650
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080410	chr18	+	6725	24	FSM	ENSMUSG00000038773.12	ENSMUST00000043775.9	6363	24	-23	-339	-23	339	multi-exon	FALSE	canonical	3	208	junction_7	44.6966672190611	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGAGTAGACAAAATTCT	NA	False	NA	154	True	ATTAAA	-17	NA	34910076	34972052	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34937103_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080420	chr18	+	194	1	Intergenic	novelGene_2464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATGAATAAAGACAACTTG	NA	False	NA	NA	False	NA	NA	NA	34931493	34931687	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_34931500_34931700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080456	chr18	-	2162	7	ISM	ENSMUSG00000024359.11	ENSMUST00000025217.11	3049	17	11644	219	-1851	-219	3prime_fragment	FALSE	canonical	3	5978	junction_5	310.776670438579	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTGTGAATGGTGAT	NA	False	NA	-11	True	AATAAA	-19	NA	35075766	35070685	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080457	chr18	-	2991	17	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	214	-219	at_least_one_novel_splicesite	TRUE	canonical	3	133	junction_16	1535.60645593199	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTGTGAATGGTGAT	413	False	NA	-11	True	AATAAA	-19	NA	35087196	35070685	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35086847
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080471	chr18	+	207	1	Intergenic	novelGene_2465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAAGGTTTGCAGTGCAT	NA	False	NA	NA	False	NA	NA	NA	35096500	35096707	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_35096500_35096700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080484	chr18	+	193	1	Intergenic	novelGene_2466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGGGTGACATATCTCA	NA	False	NA	NA	False	NA	NA	NA	35106737	35106930	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_35106700_35106900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080495	chr18	+	3740	18	FSM	ENSMUSG00000037815.8	ENSMUST00000042345.8	3733	18	-5	-2	-5	2	multi-exon	FALSE	canonical	3	1584	junction_14	159.493141807844	574	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGAAGTCGTTCTTTG	NA	False	NA	35	True	AATAAA	-23	NA	35251906	35387834	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080522	chr18	+	213	1	Intergenic	novelGene_2467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATATGGTTAATTT	83	False	NA	NA	False	TTTAAA	-3	NA	35599327	35599540	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_35599300_35599500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080523	chr18	+	182	1	Intergenic	novelGene_2468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGAGAACAACTTCTG	NA	False	NA	NA	False	NA	NA	NA	35626358	35626540	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_35626400_35626500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080528	chr18	+	325	1	Intergenic	novelGene_2469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAATACTAGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	35652961	35653286	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_35653000_35653300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080531	chr18	+	722	4	FSM	ENSMUSG00000117869.2	ENSMUST00000235679.2	1190	4	38	430	1	4	multi-exon	FALSE	canonical	3	167	junction_1	16.2685791225499	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGAATTTCATTGGCAT	NA	False	NA	NA	False	NA	NA	NA	35686461	35690939	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080546	chr18	+	4472	15	FSM	ENSMUSG00000037236.17	ENSMUST00000166793.10	6262	15	4	1786	4	630	multi-exon	FALSE	canonical	3	826	junction_2	183.6430655108	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGGCATATATCTTTATT	NA	False	NA	NA	False	AATAAA	-20	NA	35695214	35725102	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080561	chr18	+	2751	14	FSM	ENSMUSG00000037236.17	ENSMUST00000237061.2	1854	14	-5	-892	-3	54	multi-exon	FALSE	canonical	3	171	junction_1	296.625019792437	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCCGTTGTGGCTTT	NA	False	NA	10	True	NA	NA	NA	35695266	35724526	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_35695346_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080591	chr18	+	1476	4	FSM	ENSMUSG00000037058.17	ENSMUST00000041314.17	1475	4	0	-1	0	0	multi-exon	FALSE	canonical	3	2803	junction_2	114.719948860983	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGCTTGTGTTATTGGT	4640	False	NA	23	True	AATAAA	-17	NA	35731669	35750240	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_35731813_35743923_35744088_35746375_35746556_35749251
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080603	chr18	+	1503	5	FSM	ENSMUSG00000037058.17	ENSMUST00000236020.2	857	5	21	-667	13	0	multi-exon	FALSE	canonical	3	24	junction_1	1458.22751997073	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGCTTGTGTTATTGG	4685	False	NA	22	True	AATAAA	-16	NA	35731714	35750239	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_35731813_35733097_35733171_35743923_35744088_35746375_35746556_35749251
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080614	chr18	-	222	1	Intergenic	novelGene_2470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATCTGTAGATGAGTGG	NA	False	NA	NA	False	NA	NA	NA	35772908	35772686	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_35772700_35772900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080621	chr18	-	657	6	FSM	ENSMUSG00000024352.13	ENSMUST00000025209.12	702	6	40	5	10	-1	multi-exon	TRUE	canonical	3	154	junction_2	20.7980768341691	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGCTGTAATGCCCAAC	NA	False	NA	-12	True	AATAAA	-21	NA	35795199	35789746	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_35789898_35790001_35790105_35793335_35793407_35793496_35793628_35793844_35793911_35795064
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080627	chr18	-	115	1	ISM	ENSMUSG00000024350.7	ENSMUST00000025208.7	5146	8	31904	0	15526	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGACTTTATGACTCCTCT	NA	False	NA	-4	True	ATTAAA	-18	NA	35804270	35804155	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr18_-_35804200_35804300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080644	chr18	-	188	1	Intergenic	novelGene_2471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGGCAGTCTCTTCTC	NA	False	NA	NA	False	NA	NA	NA	35865283	35865095	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_35865100_35865300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080650	chr18	+	201	1	Intergenic	novelGene_2472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAACCTTGAAGGGCTG	637	False	NA	NA	False	NA	NA	NA	35890323	35890524	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_35890300_35890500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080658	chr18	+	2646	7	FSM	ENSMUSG00000091896.9	ENSMUST00000170693.9	2480	7	-164	-2	-164	2	multi-exon	FALSE	canonical	3	837	junction_2	121.947734706308	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGTCTCATCTCTCAGT	NA	False	NA	19	True	AATAAA	-30	NA	35904446	35940223	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35933269_35934326_35934421_35938570
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080665	chr18	-	187	1	Intergenic	novelGene_2473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTGCCACTAGACTCAG	NA	False	NA	1	True	NA	NA	NA	35955671	35955484	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_35955500_35955700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080678	chr18	+	3806	2	FSM	ENSMUSG00000046668.10	ENSMUST00000237291.2	1169	2	-158	-2479	-53	5	multi-exon	FALSE	canonical	3	389	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCTTCTTGCTCTTG	NA	False	NA	39	True	AATAAA	-30	NA	35962787	35994746	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_35963293_35991445
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080682	chr18	+	2610	3	NIC	ENSMUSG00000046668.10	novel	2302	3	NA	NA	-52	3	combination_of_known_junctions	FALSE	canonical	3	329	junction_2	30	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCCTGGCTTCTTGCTCT	NA	False	NA	37	True	AATAAA	-28	NA	35962788	35994744	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr18_+_35963293_35991445_35992510_35993702
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080698	chr18	+	3379	2	FSM	ENSMUSG00000046668.10	ENSMUST00000235169.2	857	2	0	-2522	0	-3	multi-exon	FALSE	canonical	3	58	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAACACTCCTGGCTTCT	NA	False	NA	31	True	AATAAA	-22	NA	35963366	35994738	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_35963453_35991445
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080713	chr18	+	197	1	Intergenic	novelGene_2474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCATTTGTATGAGTGT	2790	False	NA	NA	False	NA	NA	NA	36016112	36016309	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_36016100_36016300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080716	chr18	+	216	1	Intergenic	novelGene_2475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGGACCCTATCCATCAG	NA	False	NA	NA	False	NA	NA	NA	36032990	36033206	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_36033000_36033200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080722	chr18	-	187	1	Intergenic	novelGene_2476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGGAAGCATTC	9228	False	NA	NA	False	NA	NA	NA	36059388	36059201	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_36059200_36059400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080731	chr18	+	211	1	Intergenic	novelGene_2477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAGATGGCTCAGTGGT	NA	False	NA	NA	False	NA	NA	NA	36068647	36068858	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_36068600_36068900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080740	chr18	-	189	1	Intergenic	novelGene_2478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGACTCTGCACAGCTT	NA	False	NA	NA	False	NA	NA	NA	36084829	36084640	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_36084600_36084800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080745	chr18	-	206	1	Intergenic	novelGene_2479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGGTTGGAAAGATGGAT	NA	False	NA	NA	False	NA	NA	NA	36374779	36374573	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_36374600_36374800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080752	chr18	-	183	1	Intergenic	novelGene_2480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	313	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGAACTAAGCAC	NA	False	NA	NA	False	NA	NA	NA	36396918	36396735	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_36396700_36396900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080770	chr18	-	232	1	Intergenic	novelGene_2481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGTACCTCTTCACCTAT	NA	False	NA	NA	False	AATAAA	-12	NA	36466742	36466510	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_36466500_36466700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080784	chr18	-	710	4	FSM	ENSMUSG00000024346.7	ENSMUST00000025204.7	1109	4	-8	407	-8	122	multi-exon	FALSE	canonical	3	3024	junction_2	66.9792671072342	567	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATGTGCTTTTCTCCAC	NA	False	NA	-23	True	AATAAA	-20	NA	36587585	36537135	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_36537514_36565358_36565444_36584132_36584300_36587505
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080801	chr18	-	2348	6	FSM	ENSMUSG00000024486.7	ENSMUST00000025363.7	2375	6	26	1	-4	-1	multi-exon	FALSE	canonical	3	29	junction_4	10.9068785635488	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGTTTCATTTTTGGT	NA	False	NA	-11	True	AATAAA	-21	NA	36648832	36637980	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_36639418_36639687_36639779_36640501_36640658_36645609_36645788_36648139_36648314_36648520
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080824	chr18	-	958	5	FSM	ENSMUSG00000006050.13	ENSMUST00000173875.9	1979	5	515	506	-10	59	multi-exon	FALSE	canonical	3	1172	junction_4	156.810992918226	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTGTCTCATTCATCAA	NA	False	NA	50	True	NA	NA	NA	36803353	36800239	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_36800713_36800843_36800953_36801704_36801902_36803056_36803183_36803300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080838	chr18	+	2483	3	FSM	ENSMUSG00000033272.13	ENSMUST00000036158.7	2462	3	-12	-9	1	6	multi-exon	FALSE	canonical	3	269	junction_1	96	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGTCTTCTGTGTTTCC	NA	False	NA	25	True	AATAAA	-43	NA	36812632	36816920	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_36812677_36813568_36813668_36814580
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080844	chr18	+	2371	4	FSM	ENSMUSG00000033272.13	ENSMUST00000050476.11	2362	4	4	-13	0	5	multi-exon	TRUE	canonical	3	118	junction_3	140.362229804017	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTGTCTTCTGTGTTTC	NA	False	NA	24	True	AATAAA	-42	NA	36812635	36816919	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_36812677_36813568_36813668_36814580_36814819_36814926
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080875	chr18	+	256	1	Intergenic	novelGene_2482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAATAAATACATCTTTAA	NA	False	NA	NA	False	NA	NA	NA	36845502	36845758	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_36845500_36845800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080887	chr18	-	549	3	FSM	ENSMUSG00000014294.5	ENSMUST00000014438.5	572	3	9	14	9	-14	multi-exon	FALSE	canonical	3	2929	junction_2	68.5	282	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCAGGTGCCAGCTGTG	NA	False	NA	94	True	TATAAA	-42	NA	36877601	36875398	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_36875712_36877233_36877341_36877472
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080894	chr18	+	1624	7	FSM	ENSMUSG00000042660.9	ENSMUST00000049323.9	1619	7	-5	0	-5	0	multi-exon	FALSE	canonical	3	263	junction_5	28.487814158962	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGGTGCCAAGCTGGGA	NA	False	NA	4	True	AATAAA	-19	NA	36893267	36896863	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_36893534_36895029_36895131_36895218_36895307_36895407_36895588_36895710_36895811_36895901_36896072_36896144
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080911	chr18	-	1973	13	FSM	ENSMUSG00000001380.8	ENSMUST00000001416.8	1989	13	16	0	16	0	multi-exon	FALSE	canonical	3	550	junction_8	68.8118913334671	236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTGTGTCCTTGATGC	NA	False	NA	-2	True	AATAAA	-16	NA	36916242	36899580	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_36900007_36900242_36900390_36901139_36901257_36903134_36903378_36903469_36903598_36903857_36903952_36904148_36904248_36904380_36904489_36905310_36905437_36906572_36906669_36909229_36909350_36915732_36915823_36916063
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080953	chr18	+	218	1	Intergenic	novelGene_2483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTTTTTTGTTTTTG	NA	False	NA	33	True	NA	NA	NA	37845134	37845352	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_37845100_37845400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080963	chr18	+	2321	4	FSM	ENSMUSG00000102428.2	ENSMUST00000044851.8	5080	4	2759	0	2566	0	multi-exon	FALSE	canonical	3	109	junction_1	53.597263611743	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGACCGCGTCTGTTTAA	NA	False	NA	17	True	AATAAA	-20	NA	37901391	37974926	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_37901594_37958073_37958133_37966317_37966407_37972955
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080991	chr18	+	192	1	Intergenic	novelGene_2484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTATTCAGTCACAGAAGA	NA	False	NA	NA	False	NA	NA	NA	38008239	38008431	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_38008200_38008400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000080997	chr18	-	2037	15	FSM	ENSMUSG00000024454.17	ENSMUST00000043498.9	2032	15	-4	-1	-4	1	multi-exon	FALSE	canonical	3	500	junction_2	40.0044002681746	253	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTAGTTAGGCCATGT	NA	False	NA	-4	True	AATAAA	-22	NA	38088073	38070023	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076805_38077181_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081013	chr18	+	215	1	Intergenic	novelGene_2485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCACCATCGTATCCCTC	NA	False	NA	NA	False	NA	NA	NA	38085151	38085366	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_38085200_38085400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081027	chr18	-	178	1	Intergenic	novelGene_2486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAAGTGCTGCTTACT	8286	False	NA	NA	False	NA	NA	NA	38367266	38367088	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_38367100_38367300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081050	chr18	+	3006	9	FSM	ENSMUSG00000060450.15	ENSMUST00000072376.13	3040	9	37	-3	2	3	multi-exon	FALSE	canonical	3	120	junction_3	53.7248487666555	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACGGTGTCCTGTTGATC	963	False	NA	26	True	AATAAA	-31	NA	38429724	38450905	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_38429852_38432806_38432980_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081051	chr18	+	2854	8	FSM	ENSMUSG00000060450.15	ENSMUST00000236649.2	2822	8	-22	-10	2	3	multi-exon	FALSE	canonical	3	128	junction_3	44.1310663864829	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACGGTGTCCTGTTGATC	963	False	NA	26	True	AATAAA	-31	NA	38429724	38450905	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_38429852_38432806_38432980_38433481_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081069	chr18	+	2994	10	NIC	ENSMUSG00000060450.15	novel	2410	10	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	92.9832057051696	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGTAGACACGGTGTCC	978	False	NA	18	True	AATAAA	-23	NA	38429739	38450897	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr18_+_38429852_38430552_38430629_38431361_38431449_38432806_38432980_38433481_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081079	chr18	-	2310	7	FSM	ENSMUSG00000052102.16	ENSMUST00000063814.15	2289	7	2	-23	2	0	multi-exon	FALSE	canonical	3	1055	junction_1	137.188434886716	347	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCATTCTCCTGAGTT	NA	False	NA	-7	True	AATAAA	-17	NA	38472054	38460587	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_38462027_38463538_38463714_38465020_38465206_38466206_38466390_38468068_38468171_38471143_38471276_38471960
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081096	chr18	+	234	1	Intergenic	novelGene_2487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCACACTATCACAGAATG	NA	False	NA	NA	False	AATAAA	-22	NA	38476033	38476267	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_38476000_38476300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081101	chr18	+	194	1	Intergenic	novelGene_2488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCACCATGGGGAGCATG	NA	False	NA	NA	False	NA	NA	NA	38480354	38480548	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_38480400_38480500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081108	chr18	+	1793	8	FSM	ENSMUSG00000024425.5	ENSMUST00000236085.2	1796	8	3	0	3	0	multi-exon	FALSE	canonical	3	612	junction_4	51.8734724387826	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTAGTGTTTCATTTGGGG	9070	False	NA	44	True	AATAAA	-29	NA	38551962	38598250	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_38552230_38575969_38576058_38580743_38580875_38584607_38584696_38585357_38585483_38589107_38589175_38593597_38593704_38597329
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081121	chr18	+	203	1	Intergenic	novelGene_2489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAGCATATATATACCCAA	NA	False	NA	NA	False	NA	NA	NA	38670821	38671024	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_38670800_38671000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081135	chr18	+	212	1	Intergenic	novelGene_2490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTTCCCTCTTTGCCCT	NA	False	NA	NA	False	AAAAAG	-42	NA	39228765	39228977	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_39228800_39229000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081153	chr18	-	180	1	Intergenic	novelGene_2491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGGAGGAATATTA	NA	False	NA	NA	False	NA	NA	NA	40369706	40369526	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_40369500_40369700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081158	chr18	+	187	1	Intergenic	novelGene_2492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGAAGAGTTTCATAAT	NA	False	NA	NA	False	NA	NA	NA	40625138	40625325	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_40625100_40625300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081161	chr18	-	5263	8	NNC	ENSMUSG00000056671.8	novel	868	7	NA	NA	-11	11060	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	124.950112493927	43	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGAGTGAACACTCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	42084293	41997604	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr18_-_42001380_42008030_42008919_42014277_42014351_42045434_42045541_42065665_42065827_42068232_42068307_42070698_42070757_42084165
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081176	chr18	-	3894	32	FSM	ENSMUSG00000024493.10	ENSMUST00000097590.5	3980	32	42	44	-23	5	multi-exon	FALSE	canonical	1	536	junction_20	328.950941881023	1590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTTATTTATTTATTT	NA	False	NA	-3	True	AATAAA	-23	NA	42395217	42335406	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081183	chr18	-	3861	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	403.630442136044	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCATGTTATTTATTTAT	NA	False	NA	-5	True	AATAAA	-21	NA	42395182	42335408	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369643_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081204	chr18	+	175	1	Intergenic	novelGene_2493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAGGTAGAAGAA	7921	False	NA	NA	False	NA	NA	NA	42406305	42406480	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_42406300_42406500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081217	chr18	-	210	1	Intergenic	novelGene_2494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGTATCTCAAGTTGGA	NA	False	NA	NA	False	TTTAAA	-5	NA	42440415	42440205	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_42440200_42440400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081232	chr18	+	179	1	Intergenic	novelGene_2495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAAGTTGAAAA	NA	False	NA	NA	False	NA	NA	NA	42496242	42496421	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_42496200_42496400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081263	chr18	+	4304	23	FSM	ENSMUSG00000024498.17	ENSMUST00000173642.2	3526	23	-17	-761	5	51	multi-exon	FALSE	canonical	3	105	junction_21	184.268556260818	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTTTTTTATTTTTTC	NA	False	NA	20	True	AATATA	-18	NA	42644570	42708670	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081279	chr18	-	2440	1	FSM	ENSMUSG00000043424.11	ENSMUST00000057110.11	2379	1	-61	0	-61	0	mono-exon	FALSE	NA	NA	NA	NA	NA	515	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGGTACAGGCGTTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	43610922	43608482	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_43608500_43610900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081288	chr18	-	192	1	Intergenic	novelGene_2496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAACGAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	44511876	44511684	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_44511700_44511900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081313	chr18	+	2732	8	FSM	ENSMUSG00000054477.17	ENSMUST00000211323.3	1725	8	-682	-325	3	4	multi-exon	FALSE	canonical	2	15	junction_3	2.55550625999976	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGGTCTCTTCCTGT	NA	False	NA	NA	False	AATAAA	-25	NA	45692538	45818954	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_45693692_45694287_45694384_45725072_45725492_45788264_45788407_45803284_45803396_45810003_45810132_45816137_45816208_45818341
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081323	chr18	-	2720	9	FSM	ENSMUSG00000024477.5	ENSMUST00000236216.2	7477	9	160	4597	-3	657	multi-exon	FALSE	canonical	3	105	junction_2	12.5642100826116	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTGTCGTCTTGTTTTA	NA	False	NA	NA	False	GATAAA	-16	NA	46413900	46373014	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_46374769_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081331	chr18	-	2327	10	FSM	ENSMUSG00000071855.6	ENSMUST00000072835.7	2801	10	12	462	12	-462	multi-exon	FALSE	canonical	3	48	junction_3	12.4909844030815	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTGGCACCATTTTCTT	2725	False	NA	0	True	TATAAA	-23	NA	46444983	46415679	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_46416354_46416743_46416863_46418679_46418776_46420416_46420831_46423818_46424210_46424590_46424667_46426470_46426561_46429335_46429458_46432340_46432463_46444760
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081339	chr18	+	187	1	Intergenic	novelGene_2497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTTAGGAAGCTGGAAAGA	NA	False	NA	NA	False	NA	NA	NA	46443468	46443655	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_46443500_46443700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081355	chr18	-	3469	3	FSM	ENSMUSG00000033184.15	ENSMUST00000151189.2	1348	3	-16	-2105	-16	12	multi-exon	FALSE	canonical	3	571	junction_1	23	725	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTCTCTCAGGATTTA	NA	False	NA	0	True	AATAAA	-29	NA	46730618	46718993	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_46721756_46726315_46726562_46730157
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081378	chr18	+	3164	3	FSM	ENSMUSG00000057561.11	ENSMUST00000237478.2	2165	3	-37	-962	6	0	multi-exon	FALSE	canonical	3	27	junction_1	841.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAAATGTTTTTTTTTTCT	NA	False	NA	20	True	ATTAAA	-17	NA	46730827	46743278	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_46731224_46731707_46731768_46740570
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081388	chr18	-	1557	5	FSM	ENSMUSG00000033022.9	ENSMUST00000035804.9	1595	5	31	7	-9	4	multi-exon	FALSE	canonical	3	151	junction_1	18.3166590840142	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCCTTTTTGATGCACA	2608	False	NA	1	True	AATAAA	-23	NA	46861431	46846266	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_46847029_46848663_46848834_46853353_46853509_46856384_46856463_46861039
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081397	chr18	-	2492	4	FSM	ENSMUSG00000032905.6	ENSMUST00000035648.6	4765	4	1	2272	1	-2272	multi-exon	FALSE	canonical	3	312	junction_1	11.8977121983832	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTTATTGTCACATAAAA	NA	False	NA	-1	True	AATAAA	-28	NA	46874645	46865482	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_46867577_46868321_46868385_46870461_46870599_46874447
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081408	chr18	+	1314	6	FSM	ENSMUSG00000024480.10	ENSMUST00000025357.9	1520	6	-1	207	-1	-4	multi-exon	FALSE	canonical	3	541	junction_4	49.1064150595419	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACTGTCAGTGTTGACTT	NA	False	NA	NA	False	AATAAA	-22	NA	46874941	46923686	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_46875149_46887437_46887530_46891069_46891182_46912254_46912327_46913727_46913836_46922963
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081428	chr18	+	201	1	Intergenic	novelGene_2498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTTTTAAAACAGGGTT	5987	False	NA	NA	False	NA	NA	NA	47062049	47062250	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_47062000_47062200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081438	chr18	+	1605	7	FSM	ENSMUSG00000042705.10	ENSMUST00000049388.9	1610	7	10	-5	10	5	multi-exon	FALSE	canonical	3	1216	junction_3	103.11913282973	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTACAATGTTTTTATTTT	NA	False	NA	31	True	AATAAA	-32	NA	47091892	47221067	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_47091996_47093482_47093574_47096726_47096838_47100806_47100963_47123545_47123657_47219318_47219379_47220094
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081451	chr18	+	1452	6	FSM	ENSMUSG00000042705.10	ENSMUST00000234701.2	528	6	-17	-907	2	0	multi-exon	FALSE	canonical	3	144	junction_2	502.986441169143	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGCGTACAATGTTTTT	NA	False	NA	26	True	AATAAA	-27	NA	47091929	47221062	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_47091996_47093482_47093574_47100806_47100963_47123545_47123657_47219318_47219379_47220094
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081463	chr18	+	204	1	Intergenic	novelGene_2499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCCCAGATGTGAATTTA	NA	False	NA	NA	False	NA	NA	NA	47461383	47461587	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_47461400_47461600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081468	chr18	+	1775	1	FSM	ENSMUSG00000059040.6	ENSMUST00000235307.2	1747	1	-1	-27	-1	8	mono-exon	FALSE	NA	NA	NA	NA	NA	336	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACATAGCTGTTACTATT	NA	False	NA	NA	False	NA	NA	NA	48179712	48181487	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_48179700_48181500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081480	chr18	-	2465	6	FSM	ENSMUSG00000024505.17	ENSMUST00000163590.9	3145	6	14	666	14	662	multi-exon	FALSE	canonical	3	168	junction_3	20.6145579627602	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTATGATTGCTCTT	NA	False	NA	0	True	AATAAA	-16	NA	49888654	49829877	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_49831568_49833325_49833455_49856688_49856882_49857179_49857275_49861435_49861527_49888387
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081498	chr18	-	203	1	Intergenic	novelGene_2500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAACAAAACTTAGATGACT	NA	False	NA	NA	False	NA	NA	NA	50060675	50060472	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_50060500_50060700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081508	chr18	+	166	1	Intergenic	novelGene_2501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAATGTTTGCATATTTA	NA	False	NA	NA	False	NA	NA	NA	50155082	50155248	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_50155100_50155200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081513	chr18	+	2668	24	FSM	ENSMUSG00000024507.7	ENSMUST00000025385.7	2684	24	14	2	14	-2	multi-exon	FALSE	canonical	3	285	junction_3	18.279183363144	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTCCTGCTCCTCTTTGC	NA	False	NA	12	True	AATAAA	-21	NA	50261281	50329334	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_50261477_50263192_50263247_50272514_50272623_50273406_50273467_50275536_50275559_50275659_50275707_50277807_50277893_50279456_50279645_50288193_50288286_50291451_50291477_50293201_50293331_50295168_50295270_50297681_50297919_50299950_50300003_50303786_50303859_50305094_50305199_50306730_50306797_50310238_50310309_50310973_50311081_50312113_50312201_50314998_50315086_50316225_50316365_50324778_50324907_50328921
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081524	chr18	+	190	1	Intergenic	novelGene_2502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCTCACATATAAAGTGC	NA	False	NA	NA	False	NA	NA	NA	51467555	51467745	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_51467600_51467700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081528	chr18	+	2625	9	NNC	ENSMUSG00000024528.9	novel	2656	8	NA	NA	-32	2	at_least_one_novel_splicesite	TRUE	canonical	3	36	junction_8	183.6769837922	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATGTGGCCTGCATATA	NA	False	NA	4	True	ATTAAA	-15	NA	52598732	52625005	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515_52624796_52624860
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081544	chr18	+	2078	15	FSM	ENSMUSG00000034484.9	ENSMUST00000037850.7	2067	15	-11	0	-11	0	multi-exon	FALSE	canonical	0	0	junction_13	254.699312515598	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTTAGGGATCTTTTTTT	NA	False	NA	38	True	AATAAA	-18	NA	53309376	53353937	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_53309560_53322726_53322845_53327501_53327666_53330926_53330994_53331257_53331302_53332828_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770_53343865_53345824_53346031_53349452_53349597_53351173_53351255_53351360_53351433_53353443
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081552	chr18	-	1337	5	FSM	ENSMUSG00000024538.9	ENSMUST00000025419.9	1403	5	66	0	66	0	multi-exon	FALSE	canonical	3	373	junction_3	12.8354976529934	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTTGCAAGACTTTG	NA	False	NA	-11	True	ATTAAA	-20	NA	53551121	53539403	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_53540138_53542196_53542382_53544058_53544153_53544577_53544692_53550911
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081570	chr18	-	4686	21	FSM	ENSMUSG00000048799.9	ENSMUST00000049811.8	4554	21	-132	0	-71	0	multi-exon	FALSE	canonical	1	72	junction_13	46.6927189184781	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTGGTCGGTCTCTTT	NA	False	NA	-1	True	AATAAA	-24	NA	53877751	53814794	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081585	chr18	-	213	1	Intergenic	novelGene_2503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAGCTTCAGAAGAGATG	NA	False	NA	NA	False	NA	NA	NA	53897546	53897333	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_53897300_53897500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081600	chr18	+	4272	12	NNC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	-23	27	at_least_one_novel_splicesite	TRUE	canonical	3	113	junction_8	32.497425199977	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTCTTTCCCCTTTCCT	NA	False	NA	NA	False	TTTAAA	-1	NA	53995170	54088647	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065265_54065412_54066521_54066618_54081119_54081227_54086316
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081602	chr18	+	4278	12	NIC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	-23	30	combination_of_known_junctions	FALSE	canonical	3	96	junction_8	36.435156938828	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTCCCCTTTCCTCTA	NA	False	NA	NA	False	TTTAAA	-4	NA	53995170	54088650	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065262_54065412_54066521_54066618_54081119_54081227_54086316
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081606	chr18	+	4296	13	NNC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	-23	27	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_11	65.9298343358722	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTCTTTCCCCTTTCCT	NA	False	NA	NA	False	TTTAAA	-1	NA	53995170	54088647	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065265_54065412_54066521_54066618_54081119_54081227_54081716_54081741_54086316
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081621	chr18	+	194	1	Intergenic	novelGene_2504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGGGAAAGCAACTAAGC	NA	False	NA	NA	False	NA	NA	NA	54941822	54942016	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_54941800_54942000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081630	chr18	-	2080	20	FSM	ENSMUSG00000053644.14	ENSMUST00000174518.8	4131	20	33	2018	33	4	multi-exon	FALSE	canonical	3	60	junction_19	109.003545140448	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGGTGAGTTTTTATGT	2887	False	NA	-1	True	ATTAAA	-34	NA	56705990	56659811	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_56660080_56661348_56661425_56664561_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670371_56671772_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231_56684313_56692293_56692360_56693847_56693902_56695104_56695277_56695554_56695748_56705916
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081648	chr18	+	194	1	Intergenic	novelGene_2505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATATCACAGGGACACTA	NA	False	NA	NA	False	NA	NA	NA	56698751	56698945	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_56698800_56698900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081653	chr18	+	1557	5	FSM	ENSMUSG00000008301.12	ENSMUST00000008445.7	1942	5	181	204	181	-204	multi-exon	FALSE	canonical	3	376	junction_1	34.4818792991333	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTCAGCTGTTACATTCA	NA	False	NA	NA	False	ATTAAA	-22	NA	56706074	56720580	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_56706208_56708533_56709121_56713251_56713373_56717362_56717447_56719948
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081665	chr18	+	136	1	Intergenic	novelGene_2506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATGAAATGAAAACAATTT	4672	False	NA	NA	False	NA	NA	NA	56712636	56712772	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_56712600_56712800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081675	chr18	+	207	1	Intergenic	novelGene_2507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCCTGTGGGAGAATAA	NA	False	NA	NA	False	NA	NA	NA	56777314	56777521	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_56777300_56777500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081682	chr18	-	203	1	Intergenic	novelGene_2508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTTTTTTTTTAAGAT	3135	False	NA	0	True	NA	NA	NA	56788359	56788156	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_56788200_56788400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081688	chr18	-	278	1	Intergenic	novelGene_2509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTAGGGAGGATATGGA	NA	False	NA	0	True	NA	NA	NA	56795333	56795055	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_56795100_56795300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081698	chr18	-	178	1	Intergenic	novelGene_2510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGAGCAAGCAGGAGCGA	NA	False	NA	NA	False	NA	NA	NA	56797397	56797219	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_56797200_56797400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081704	chr18	+	210	1	Intergenic	novelGene_2511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	345	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAAAGCTGTCCTTTGC	NA	False	NA	NA	False	NA	NA	NA	56807517	56807727	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_56807500_56807700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081739	chr18	+	5048	9	FSM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	-18	0	-18	0	multi-exon	FALSE	canonical	3	500	junction_4	197.841121547064	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTGCAATGATTTAAATG	NA	False	NA	12	True	AATAAA	-22	NA	57487794	57526028	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081746	chr18	+	4362	5	NIC	ENSMUSG00000024594.10	novel	523	5	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	3	294	junction_1	276.069284781918	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTGCAATGATTTAAATG	NA	False	NA	12	True	AATAAA	-22	NA	57506901	57526028	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr18_+_57507156_57507598_57507763_57514699_57514804_57517245_57517349_57522291
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081754	chr18	+	4257	5	FSM	ENSMUSG00000024594.10	ENSMUST00000238057.2	523	5	-13	-3721	-13	0	multi-exon	FALSE	canonical	3	123	junction_1	350.033123432626	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTGCAATGATTTAAATG	NA	False	NA	12	True	AATAAA	-22	NA	57506950	57526028	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_57507100_57507598_57507763_57514699_57514804_57517245_57517349_57522291
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081774	chr18	+	3398	5	FSM	ENSMUSG00000024601.10	ENSMUST00000025503.10	3377	5	-18	-3	-18	3	multi-exon	FALSE	canonical	3	445	junction_3	47.2175814713121	224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGTCCTGTGTATTGAA	NA	False	NA	NA	False	AATAAA	-21	NA	58792519	58813443	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_58792870_58804279_58804400_58804519_58804724_58806321_58806439_58810836
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081791	chr18	+	221	1	Intergenic	novelGene_2512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	355	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATGATTAATAATTAAAC	NA	False	NA	NA	False	NA	NA	NA	60612445	60612666	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_60612400_60612700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081797	chr18	+	186	1	Intergenic	novelGene_2513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCTGATGAAATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	60618657	60618843	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_60618700_60618800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081816	chr18	+	2129	11	FSM	ENSMUSG00000024604.8	ENSMUST00000025506.7	2210	11	0	81	0	-81	multi-exon	FALSE	canonical	3	519	junction_10	72.8288404411329	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGACTTATGTTTCTTTT	NA	False	NA	22	True	ATTAAA	-23	NA	60693807	60705801	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_60693952_60694322_60694377_60696837_60696868_60697434_60697568_60698689_60698791_60699424_60699598_60700442_60700644_60702428_60702594_60703852_60703942_60704071_60704204_60704894
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081823	chr18	+	590	5	FSM	ENSMUSG00000024608.12	ENSMUST00000025511.11	597	5	8	-1	8	1	multi-exon	FALSE	canonical	3	20921	junction_1	2863.01274883644	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTCTGGTGTTGTGTT	NA	False	NA	69	True	AATAAA	-19	NA	60907675	60911619	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_60907759_60909472_60909624_60910001_60910164_60910884_60910962_60911502
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081837	chr18	+	612	5	FSM	ENSMUSG00000024608.12	ENSMUST00000118551.8	602	5	-5	-5	-5	0	multi-exon	FALSE	canonical	3	252	junction_1	11592.6756914657	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTGGTGTTGTGT	NA	False	NA	68	True	AATAAA	-18	NA	60907747	60911618	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_60907854_60909472_60909624_60910001_60910164_60910884_60910962_60911502
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081854	chr18	-	4563	25	FSM	ENSMUSG00000024613.17	ENSMUST00000176630.8	4529	25	-15	-19	-15	19	multi-exon	FALSE	canonical	2	677	junction_9	198.19802369656	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGACTCGGACTGTTAC	NA	False	NA	1	True	AATAAA	-36	NA	60982058	60946807	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081866	chr18	-	4511	25	NNC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	3	0	at_least_one_novel_splicesite	TRUE	canonical	2	183	junction_2	270.111345353891	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60982028	60946826	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr18_-_60947261_60947594_60947638_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081867	chr18	-	4518	25	NNC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	292.136526302344	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60982028	60946826	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962081_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081913	chr18	-	174	1	Intergenic	novelGene_2514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAGCCAGTAAGCA	NA	False	NA	NA	False	NA	NA	NA	60953300	60953126	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_60953100_60953300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081920	chr18	-	1874	4	NNC	ENSMUSG00000024619.9	novel	1750	3	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_3	439.390486924785	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTGCCATCCTTTCTCGT	7733	False	NA	-5	True	ATTAAA	-22	NA	61169292	61151933	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr18_-_61153014_61153445_61153592_61157113_61157217_61168747
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081921	chr18	-	1775	3	FSM	ENSMUSG00000024619.9	ENSMUST00000025521.9	1750	3	-25	0	-25	0	multi-exon	FALSE	canonical	3	995	junction_1	57.5	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTGCCATCCTTTCTCGT	7729	False	NA	-5	True	ATTAAA	-22	NA	61169296	61151933	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_61153014_61153445_61153592_61168747
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081943	chr18	+	181	1	Intergenic	novelGene_2515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAGAAAGCAGAA	NA	False	NA	NA	False	NA	NA	NA	61211242	61211423	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_61211200_61211400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081950	chr18	-	5109	21	FSM	ENSMUSG00000024622.9	ENSMUST00000091884.6	5103	21	-6	0	-6	0	multi-exon	FALSE	canonical	3	70	junction_14	23.3398264775041	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGAGCCTGTTCAATGCT	5818	False	NA	-5	True	AATAAA	-29	NA	61310128	61264348	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290591_61290686_61290834_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081965	chr18	-	3641	12	FSM	ENSMUSG00000033871.15	ENSMUST00000075299.13	3656	12	15	0	15	0	multi-exon	FALSE	canonical	3	29	junction_9	7.10022697809696	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGGCTCTGATTACTGT	3308	False	NA	NA	False	AAAAAG	-37	NA	61533487	61431206	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_61431855_61432656_61432812_61435689_61435812_61437778_61437855_61440277_61441086_61442103_61442166_61442716_61442754_61443477_61444580_61445224_61445342_61448807_61449021_61456205_61456380_61533360
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000081984	chr18	+	4352	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	-10	-259	-10	259	multi-exon	TRUE	canonical	0	0	junction_9	613.012254927549	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAATGAGCCATGAAGAT	418	False	NA	24	True	AATAAA	-22	NA	61688334	61723391	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082021	chr18	+	1659	1	Genic_Genomic	ENSMUSG00000024576.15	novel	NA	NA	NA	NA	5818	259	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAATGAGCCATGAAGAT	NA	False	NA	24	True	AATAAA	-22	NA	61721732	61723391	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr18_+_61721700_61723400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082038	chr18	+	192	1	Intergenic	novelGene_2516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCACAGAGATCCACTT	NA	False	NA	NA	False	NA	NA	NA	61804066	61804258	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_61804100_61804300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082048	chr18	-	2031	6	FSM	ENSMUSG00000024579.8	ENSMUST00000025472.7	2017	6	-13	-1	-13	1	multi-exon	FALSE	canonical	3	53	junction_4	12.1061967603372	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGACTTATTCTTTTTT	NA	False	NA	0	True	TATAAA	-17	NA	61840719	61829906	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_61831048_61831434_61831576_61832363_61832576_61835266_61835442_61836582_61836790_61840564
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082054	chr18	-	4048	4	FSM	ENSMUSG00000024580.9	ENSMUST00000062991.9	4038	4	-8	-2	-6	2	multi-exon	FALSE	canonical	3	248	junction_1	10.9645894689324	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGAGTTCTCTCATGATT	NA	False	NA	0	True	ATTAAA	-16	NA	61859402	61845492	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_61849199_61851824_61851907_61852772_61852927_61859296
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082071	chr18	+	4538	17	FSM	ENSMUSG00000045629.9	ENSMUST00000051720.6	4536	17	0	-2	0	2	multi-exon	TRUE	canonical	3	14	junction_11	4.02336923485777	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACCCTTTTGTCACCTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	62086145	62148788	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_62086239_62094014_62094114_62101059_62101188_62104012_62104119_62106357_62106502_62107519_62107719_62108639_62108714_62110947_62111144_62120626_62120761_62122263_62122306_62122414_62124116_62124208_62124390_62140718_62140870_62141527_62141651_62144877_62145029_62146103_62146301_62147969
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082077	chr18	-	2163	1	FSM	ENSMUSG00000045730.5	ENSMUST00000053640.5	2144	1	-19	0	-19	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATTGCACCCGTTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	62313049	62310886	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_62310900_62313000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082083	chr18	-	4397	22	FSM	ENSMUSG00000042211.8	ENSMUST00000048688.8	4254	22	-49	-94	-49	94	multi-exon	FALSE	canonical	3	214	junction_21	37.2590368590547	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGCCATGGACTTGAAA	NA	False	NA	46	True	AATAAA	-17	NA	62681815	62637131	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082122	chr18	+	3537	12	FSM	ENSMUSG00000024581.14	ENSMUST00000025474.14	3567	12	30	0	0	0	multi-exon	FALSE	canonical	3	194	junction_8	19.1691039293584	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCAGTTTTATTTGCT	NA	False	NA	6	True	AATAAA	-18	NA	63110931	63132521	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_63111096_63113536_63113605_63115689_63115775_63116444_63116463_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082151	chr18	+	187	1	Intergenic	novelGene_2517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAGCACTTTCACATGTA	NA	False	NA	NA	False	NA	NA	NA	63902827	63903014	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_63902800_63903000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082161	chr18	+	211	1	Intergenic	novelGene_2518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	278	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTCCTGCTGCCAGCTT	NA	False	NA	NA	False	NA	NA	NA	64461411	64461622	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_64461400_64461600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082171	chr18	+	188	1	Intergenic	novelGene_2519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAGCGGATGCACAGTGC	NA	False	NA	NA	False	NA	NA	NA	64490668	64490856	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_64490700_64490900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082179	chr18	-	2924	11	FSM	ENSMUSG00000024588.11	ENSMUST00000236586.3	6571	11	19	3628	-8	719	multi-exon	FALSE	canonical	3	260	junction_4	29.1315979650963	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTTTGAGTTTTTTTT	NA	False	NA	0	True	NA	NA	NA	64622152	64589612	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64611842_64616404_64616529_64621971
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082185	chr18	-	2074	10	FSM	ENSMUSG00000024588.11	ENSMUST00000025484.9	2059	10	-15	0	-5	0	multi-exon	FALSE	canonical	3	22	junction_9	95.9785212597583	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGCTGTGTACGCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	64622149	64590335	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64611842_64621971
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082188	chr18	-	2647	15	FSM	ENSMUSG00000024587.11	ENSMUST00000025483.11	2687	15	51	-11	-2	0	multi-exon	FALSE	canonical	3	2259	junction_14	785.439045946889	1533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTGACTTATTTTCTC	NA	False	NA	NA	False	AATAAA	-31	NA	64649628	64632717	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082191	chr18	-	2650	15	FSM	ENSMUSG00000024587.11	ENSMUST00000237400.2	2745	15	95	0	-2	0	multi-exon	FALSE	canonical	3	3478	junction_14	514.735973533014	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTGACTTATTTTCTC	NA	False	NA	NA	False	AATAAA	-31	NA	64649628	64632717	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082214	chr18	-	2893	14	FSM	ENSMUSG00000024587.11	ENSMUST00000237585.2	2268	14	-62	-563	0	0	multi-exon	FALSE	canonical	3	3478	junction_13	534.16599817797	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACACTTTGCTGACTT	NA	False	NA	NA	False	AATAAA	-23	NA	64649570	64632725	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_64633721_64634373_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082215	chr18	-	2906	14	NIC	ENSMUSG00000024587.11	novel	2687	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	2259	junction_13	814.730586754961	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACACTTTGCTGACTT	NA	False	NA	NA	False	AATAAA	-23	NA	64649586	64632725	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr18_-_64633721_64634373_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082217	chr18	-	2605	15	FSM	ENSMUSG00000024587.11	ENSMUST00000237369.2	2103	15	56	-558	0	0	multi-exon	FALSE	canonical	3	85	junction_12	1341.18505510642	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACACTTTGCTGACTT	NA	False	NA	NA	False	AATAAA	-23	NA	64649570	64632725	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644970_64645054_64645121_64648396_64648480_64649486
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082241	chr18	+	192	1	Intergenic	novelGene_2520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAAGGTGCACTTAACAG	NA	False	NA	NA	False	NA	NA	NA	64832434	64832626	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_64832400_64832600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082256	chr18	+	218	1	Intergenic	novelGene_2521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGCAACACTTGGAATAC	NA	False	NA	NA	False	NA	NA	NA	65071237	65071455	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_65071200_65071500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082268	chr18	+	179	1	Intergenic	novelGene_2522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAGGCAGAAGCAG	313	False	NA	NA	False	NA	NA	NA	65588432	65588611	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_65588400_65588600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082275	chr18	+	189	1	Intergenic	novelGene_2523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATACATCACTAGACCAT	2010	False	NA	NA	False	NA	NA	NA	65590129	65590318	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_65590100_65590300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082278	chr18	+	191	1	Intergenic	novelGene_2524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTGGAATTCTGTGCTA	NA	False	NA	NA	False	NA	NA	NA	65616760	65616951	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_65616800_65617000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082280	chr18	+	96	1	Intergenic	novelGene_2525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTTGTGGGCTGGAG	NA	False	NA	NA	False	NA	NA	NA	65645062	65645158	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_65645100_65645200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082303	chr18	-	3583	14	FSM	ENSMUSG00000041891.17	ENSMUST00000048260.15	3581	14	-2	0	-2	0	multi-exon	FALSE	canonical	3	538	junction_1	125.2370060817	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATGTCTGTATCCTGCTG	NA	False	NA	-3	True	AATAAA	-34	NA	66135712	66113808	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_66115782_66116895_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082305	chr18	-	4697	13	FSM	ENSMUSG00000041891.17	ENSMUST00000236866.2	4676	13	-2	-19	-2	0	multi-exon	FALSE	canonical	3	864	junction_5	66.5663307452716	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATGTCTGTATCCTGCTG	NA	False	NA	-3	True	AATAAA	-34	NA	66135712	66113808	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082325	chr18	+	187	1	Intergenic	novelGene_2526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGTTTGTCAACCTACA	NA	False	NA	NA	False	NA	NA	NA	66357022	66357209	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_66357000_66357200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082340	chr18	+	2665	3	FSM	ENSMUSG00000024521.9	ENSMUST00000025399.9	2727	3	62	0	2	0	multi-exon	FALSE	canonical	3	99	junction_2	7	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTCTTTCTGTGTGTTTT	NA	False	NA	22	True	AATAAA	-34	NA	66591665	66598631	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_66591884_66593913_66594070_66596340
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082344	chr18	+	191	1	Intergenic	novelGene_2527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACGTTCTGATTAGACAAT	NA	False	NA	NA	False	NA	NA	NA	66632616	66632807	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_66632600_66632800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082354	chr18	+	2426	1	FSM	ENSMUSG00000109901.3	ENSMUST00000210564.3	2524	1	25	73	25	-73	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAATGTGTTCATTTCA	NA	False	NA	12	True	ATTAAA	-25	NA	67338461	67340887	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_67338500_67340900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082367	chr18	+	3905	8	FSM	ENSMUSG00000024525.8	ENSMUST00000025403.8	5054	8	1	1148	1	-1148	multi-exon	FALSE	canonical	3	959	junction_6	106.526800307122	239	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCAAGCGATTTGTTCTA	NA	False	NA	34	True	NA	NA	NA	67422256	67454394	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082382	chr18	-	196	1	Intergenic	novelGene_2528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGAAAACTCCCCAGTG	7177	False	NA	NA	False	TTTAAA	-3	NA	67432273	67432077	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_67432100_67432300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082385	chr18	+	932	5	FSM	ENSMUSG00000024526.10	ENSMUST00000025404.10	1115	5	183	0	183	0	multi-exon	FALSE	canonical	1	47	junction_1	40.4042077016738	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTGCAACTGGTTTGT	6391	False	NA	28	True	AATAAA	-26	NA	67476856	67500855	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_67476911_67491779_67491925_67493165_67493313_67499444_67499627_67500451
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082402	chr18	-	3153	17	FSM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	-55	-4	-55	4	multi-exon	FALSE	canonical	3	685	junction_14	36.0532917186489	894	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTGCCATGTTGTGCTTA	NA	False	NA	2	True	AATAAA	-35	NA	67582297	67537829	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_67538585_67540335_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050_67562325_67564723_67564849_67567224_67567300_67573251_67573405_67573511_67573616_67575379_67575458_67575820_67575921_67581957
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082416	chr18	+	157	1	Intergenic	novelGene_2529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGTCATTAGTAA	NA	False	NA	NA	False	NA	NA	NA	67616246	67616403	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_67616200_67616400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082433	chr18	+	192	1	Intergenic	novelGene_2530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCACAAAAGGTAGAAAGACC	NA	False	NA	NA	False	NA	NA	NA	67689299	67689491	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_67689300_67689500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082436	chr18	+	204	1	Intergenic	novelGene_2531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTTCCAACATTATACTC	NA	False	NA	NA	False	NA	NA	NA	67713209	67713413	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_67713200_67713400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082441	chr18	-	179	1	Intergenic	novelGene_2532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGGCGGAGTCACA	NA	False	NA	NA	False	NA	NA	NA	67732570	67732391	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_67732400_67732600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082446	chr18	+	215	1	Intergenic	novelGene_2533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	759	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTTCTTACAACTATTT	NA	False	NA	NA	False	NA	NA	NA	67738709	67738924	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_67738700_67738900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082463	chr18	+	1096	7	FSM	ENSMUSG00000024537.6	ENSMUST00000025418.4	1059	7	-18	-19	-18	19	multi-exon	FALSE	canonical	3	396	junction_3	27.1871088733041	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCTCTTTGAATCAGTTA	NA	False	NA	45	True	AATAAA	-31	NA	67774650	67787251	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_67774806_67777378_67777551_67779062_67779122_67781197_67781317_67781842_67782017_67786222_67786344_67786955
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082474	chr18	-	1619	10	FSM	ENSMUSG00000024539.18	ENSMUST00000025420.14	1568	10	-38	-13	-31	12	multi-exon	FALSE	canonical	0	0	junction_7	132.404915801473	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTATGTGTGTGTT	NA	False	NA	-2	True	ATTAAA	-31	NA	67857696	67798568	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_67798945_67805736_67805839_67808789_67808957_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67844906_67844998_67857511
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082490	chr18	+	129	1	Intergenic	novelGene_2534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTCTCTCCCTAGACTC	NA	False	NA	NA	False	NA	NA	NA	67897372	67897501	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_67897400_67897500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082496	chr18	+	3543	9	FSM	ENSMUSG00000079614.5	ENSMUST00000025421.9	3542	9	0	-1	0	1	multi-exon	FALSE	canonical	3	1509	junction_8	173.331285043987	1192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTTGTCTTATAAAAAAGC	NA	False	NA	20	True	AATAAA	-22	NA	67907945	67928558	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082531	chr18	-	3952	4	FSM	ENSMUSG00000038121.7	ENSMUST00000042852.7	9651	4	113	5586	-18	-5586	multi-exon	FALSE	canonical	3	166	junction_3	16.3367343397905	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCCCTGACCTATTTAA	NA	False	NA	3	True	AATAAA	-21	NA	68433291	68398843	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_68402024_68405633_68405746_68408832_68409346_68433144
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082544	chr18	+	5008	11	FSM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	0	0	0	0	multi-exon	FALSE	canonical	3	765	junction_7	139.06832852954	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTTGATTCATTTCTAG	NA	False	NA	NA	False	NA	NA	NA	68433425	68457923	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082562	chr18	+	183	1	Intergenic	novelGene_2535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATAAGGATTTCAACGTC	NA	False	NA	NA	False	NA	NA	NA	68436648	68436831	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_68436600_68436800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082575	chr18	-	3504	8	NIC	ENSMUSG00000044906.7	novel	1715	9	NA	NA	-6	2	intron_retention	FALSE	canonical	3	82	junction_4	46.2782180878624	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTTACGTCTCCTTT	NA	False	NA	0	True	AATAAA	-20	NA	70605557	70585280	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600401_70601589_70602519_70602849_70604743_70605051_70605361
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082577	chr18	-	3227	9	FSM	ENSMUSG00000044906.7	ENSMUST00000067556.4	2291	9	-6	-930	-6	2	multi-exon	FALSE	canonical	3	72	junction_5	54.5590276672889	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTTACGTCTCCTTT	NA	False	NA	0	True	AATAAA	-20	NA	70605557	70585280	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70600557_70600829_70601589_70602519_70602849_70604743_70605051_70605361
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082579	chr18	-	2936	9	NIC	ENSMUSG00000044906.7	novel	1715	9	NA	NA	-6	2	combination_of_known_splicesites	FALSE	canonical	3	27	junction_5	68.2567533288831	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTTACGTCTCCTTT	NA	False	NA	0	True	AATAAA	-20	NA	70605557	70585280	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600401_70600557_70601124_70601589_70602519_70602849_70604743_70605051_70605361
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082596	chr18	-	3500	8	NIC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	-6	2	intron_retention	FALSE	canonical	3	98	junction_4	41.1701298496463	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTTACGTCTCCTTT	NA	False	NA	0	True	AATAAA	-20	NA	70605557	70585280	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70601589_70602519_70602849_70604743_70605051_70605361
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082633	chr18	-	2872	10	FSM	ENSMUSG00000038425.19	ENSMUST00000161542.8	2736	10	-141	5	-11	0	multi-exon	FALSE	canonical	3	36	junction_9	94.1501296524877	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGGCTCTCACTGTAAG	NA	False	NA	-17	True	AATAAA	-18	NA	70663350	70641755	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661899_70662821
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082637	chr18	-	2423	10	NNC	ENSMUSG00000038425.19	novel	2778	10	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_9	93.0357690406634	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGGCTCTCACTGTAAG	NA	False	NA	-17	True	AATAAA	-18	NA	70663341	70641755	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661896_70663258
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082653	chr18	+	1354	3	FSM	ENSMUSG00000024513.17	ENSMUST00000114946.4	1290	3	-60	-4	-60	4	multi-exon	FALSE	canonical	3	203	junction_2	64.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAAGTGCCTGGTGTTTTC	NA	False	NA	17	True	AATAAA	-34	NA	70701344	70715987	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_70702039_70713723_70713884_70715487
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082664	chr18	+	1711	7	FSM	ENSMUSG00000024513.17	ENSMUST00000074058.11	1953	7	242	0	97	0	multi-exon	FALSE	canonical	3	48	junction_4	103.071846570999	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGGAACTTCTTTTGTT	NA	False	NA	18	True	AATAAA	-18	NA	70701501	70759202	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_70702039_70713723_70713884_70726273_70726412_70749635_70749727_70750906_70751085_70755653_70755793_70758734
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082686	chr18	+	206	1	Intergenic	novelGene_2536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAAAATAGCACTGGGAG	NA	False	NA	NA	False	NA	NA	NA	73682241	73682447	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_73682200_73682400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082699	chr18	-	4558	12	FSM	ENSMUSG00000024515.14	ENSMUST00000025393.14	3384	12	-21	-1153	-21	1153	multi-exon	FALSE	canonical	3	347	junction_11	31.2441730104581	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTTTATTTGCTTGGAA	NA	False	NA	NA	False	ATTAAA	-18	NA	73836872	73770926	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73836500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082728	chr18	-	180	1	Intergenic	novelGene_2537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTATAAAAAGACACTTA	NA	False	NA	NA	False	NA	NA	NA	74025919	74025739	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_74025700_74025900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082740	chr18	-	180	1	Intergenic	novelGene_2538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAGTAGCAACAAAAT	8928	False	NA	NA	False	NA	NA	NA	74207014	74206834	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_74206800_74207000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082749	chr18	+	203	1	Intergenic	novelGene_2539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAAAACATGAAATCATA	NA	False	NA	NA	False	NA	NA	NA	74299539	74299742	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_74299500_74299700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082769	chr18	+	2623	15	FSM	ENSMUSG00000024560.8	ENSMUST00000025444.8	2620	15	0	-3	0	0	multi-exon	TRUE	canonical	3	205	junction_6	27.3663729300567	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTCTCTCAATAGTCTC	NA	False	NA	17	True	AATAAA	-20	NA	74349201	74354567	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082775	chr18	+	2551	15	NNC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	81	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_8	60.669605408377	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCTCTCTCTCAATAGT	NA	False	NA	14	True	AATAAA	-17	NA	74349282	74354564	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352322_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082801	chr18	+	1523	10	FSM	ENSMUSG00000036880.11	ENSMUST00000041053.11	1516	10	-2	-5	-2	5	multi-exon	FALSE	canonical	3	191	junction_8	17.7325814376939	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTCTTGTTGGTTTTTT	NA	False	NA	18	True	AATAAA	-22	NA	74912265	74939284	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_74912337_74920189_74920357_74925421_74925551_74926357_74926475_74928201_74928350_74931382_74931559_74932115_74932246_74934367_74934439_74937071_74937227_74938925
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082808	chr18	+	234	1	Intergenic	novelGene_2540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGCACTTGGGAAGCAG	NA	False	NA	NA	False	NA	NA	NA	75096633	75096867	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_75096600_75096900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082821	chr18	+	801	7	FSM	ENSMUSG00000062328.9	ENSMUST00000079716.6	775	7	-23	-3	-23	3	multi-exon	FALSE	canonical	3	6761	junction_1	2088.63605148325	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGACTGTCTAGTAGCTTT	NA	False	NA	24	True	ATTAAA	-40	NA	75133524	75136455	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_75133615_75134261_75134315_75134420_75134462_75134736_75134872_75135094_75135194_75135731_75135924_75136264
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082843	chr18	+	1084	3	FSM	ENSMUSG00000036299.6	ENSMUST00000237263.2	1266	3	-35	217	-3	2	multi-exon	FALSE	canonical	3	388	junction_1	205.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGCTTTTTGTCTTTTC	NA	False	NA	28	True	ATTAAA	-19	NA	75138935	75143006	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_75139186_75141721_75141898_75142348
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082852	chr18	+	976	3	FSM	ENSMUSG00000036299.6	ENSMUST00000040284.6	979	3	5	-2	4	2	multi-exon	FALSE	canonical	3	169	junction_1	315	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGCTTTTTGTCTTTTC	NA	False	NA	28	True	ATTAAA	-19	NA	75138943	75143006	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_75139086_75141721_75141898_75142348
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082868	chr18	+	2537	17	FSM	ENSMUSG00000035765.11	ENSMUST00000039608.9	2456	17	-79	-2	-75	2	multi-exon	FALSE	canonical	3	162	junction_13	17.5886149255705	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGACTTATTTTTAAAC	NA	False	NA	20	True	AATAAA	-20	NA	75151776	75420037	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082882	chr18	-	204	1	Intergenic	novelGene_2541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATGTTCCCAATCCTGT	NA	False	NA	NA	False	NA	NA	NA	75156094	75155890	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_75155900_75156100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082889	chr18	-	210	1	Intergenic	novelGene_2542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTTTTTCGAGACAGG	NA	False	NA	NA	False	NA	NA	NA	75225938	75225728	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_75225700_75225900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082894	chr18	+	177	1	Intergenic	novelGene_2543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGACTTTCAAGTC	NA	False	NA	NA	False	NA	NA	NA	75468328	75468505	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_75468300_75468500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082898	chr18	+	186	1	Intergenic	novelGene_2544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGAGAGAGAGAGAGAG	6174	False	NA	NA	False	NA	NA	NA	75494603	75494789	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_75494600_75494800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082906	chr18	+	4445	4	FSM	ENSMUSG00000025880.12	ENSMUST00000026999.10	4278	4	-167	0	-167	0	multi-exon	FALSE	canonical	3	1522	junction_2	99.0667563929607	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTGTTGTTCAGAGCTT	NA	False	NA	19	True	ATTAAA	-24	NA	75500432	75529006	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_75502640_75503965_75504020_75508944_75509020_75526897
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082918	chr18	+	189	1	Intergenic	novelGene_2545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACGAGGAAGTGAGTATG	NA	False	NA	NA	False	NA	NA	NA	76057712	76057901	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_76057700_76057900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082942	chr18	+	1399	3	FSM	ENSMUSG00000090000.3	ENSMUST00000026487.6	1402	3	5	-2	5	2	multi-exon	FALSE	canonical	3	1641	junction_2	78	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTCTGATTTATGCCTTTA	NA	False	NA	17	True	AATAAA	-19	NA	77017717	77029310	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_77017913_77027263_77027366_77028208
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082966	chr18	+	1950	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26796	-124	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	376.676732685662	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTTGATTCTTTCAAGAA	6289	False	NA	19	True	AATAAA	-29	NA	77126107	77234509	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr18_+_77126175_77126529_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082975	chr18	+	2351	13	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26716	2	at_least_one_novel_splicesite	FALSE	canonical	3	417	junction_12	260.606810582959	123	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTAGCATTTATGCTTT	6369	False	NA	21	True	ATTAAA	-33	NA	77126187	77234635	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000082980	chr18	+	5192	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26660	1910	at_least_one_novel_splicesite	FALSE	canonical	3	706	junction_12	216.509206932155	283	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTCTGACATTGATTT	6425	False	NA	7	True	AATAAA	-18	NA	77126243	77243406	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083016	chr18	+	183	1	Intergenic	novelGene_2546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTTTACATTTTAAATTTA	4688	False	NA	NA	False	NA	NA	NA	77190790	77190973	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_77190800_77191000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083026	chr18	-	186	1	Intergenic	novelGene_2547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAAGCTTATGCTCATTT	5957	False	NA	NA	False	NA	NA	NA	77456235	77456049	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_77456000_77456200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083031	chr18	-	181	1	Intergenic	novelGene_2548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTAAAGTGTAT	NA	False	NA	NA	False	NA	NA	NA	77700018	77699837	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_77699800_77700000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083041	chr18	-	5203	5	FSM	ENSMUSG00000047466.11	ENSMUST00000074653.6	5125	5	-69	-9	-19	9	multi-exon	FALSE	canonical	3	42	junction_2	68.2948570538075	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTCTGAGAATGTTTTC	NA	False	NA	1	True	AATAAA	-24	NA	77801702	77719183	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_77723025_77730763_77730891_77740824_77740993_77761595_77762381_77801420
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083059	chr18	-	4933	4	NIC	ENSMUSG00000047466.11	novel	1606	5	NA	NA	0	5	intron_retention	FALSE	canonical	3	34	junction_3	66.9178600972864	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTCTTTCTGAGAATGT	NA	False	NA	-3	True	AATAAA	-20	NA	77802186	77719187	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr18_-_77723025_77730763_77730891_77761595_77762381_77802002
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083064	chr18	-	225	1	Intergenic	novelGene_2549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAATGTTTGGGGTGGGG	6785	False	NA	NA	False	AATAAA	-24	NA	77725946	77725721	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_77725700_77725900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083068	chr18	+	200	1	Intergenic	novelGene_2550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATGATTTTGTTTGTT	NA	False	NA	NA	False	AATAGA	-12	NA	77766407	77766607	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_77766400_77766600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083078	chr18	+	186	1	Intergenic	novelGene_2551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACTGATTACTCTTCCA	6075	False	NA	NA	False	NA	NA	NA	77806267	77806453	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_77806300_77806500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083081	chr18	-	273	1	Intergenic	novelGene_2552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGACTGAGGGAGGTGGA	NA	False	NA	NA	False	AATAAA	-11	NA	77811477	77811204	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_77811200_77811500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083090	chr18	+	189	1	Intergenic	novelGene_2553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTAATGGTGCCGGGCG	1078	False	NA	NA	False	NA	NA	NA	77826468	77826657	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_77826500_77826700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083096	chr18	-	166	1	Intergenic	novelGene_2554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGGACGTGGTGGTACACG	NA	False	NA	NA	False	NA	NA	NA	77844054	77843888	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_77843900_77844100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083101	chr18	-	1017	9	FSM	ENSMUSG00000041840.9	ENSMUST00000048192.9	1003	9	-13	-1	-7	0	multi-exon	FALSE	canonical	3	1190	junction_6	88.5180066427165	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTTATCTGTTGCTC	NA	False	NA	0	True	AATACA	-20	NA	77855493	77845266	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77848606_77848731_77849681_77849817_77851772_77851909_77854563_77854739_77855419
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083115	chr18	+	2245	12	FSM	ENSMUSG00000025428.16	ENSMUST00000026495.15	2471	12	227	-1	0	1	multi-exon	FALSE	canonical	3	5078	junction_4	224.265707226978	3809	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTTGGTTGATGAGTCC	NA	False	NA	21	True	ATTAAA	-23	NA	77861655	77870570	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083129	chr18	+	161	1	Intergenic	novelGene_2555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAATGCTCTTACATCTCA	NA	False	NA	NA	False	NA	NA	NA	77897973	77898134	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_77898000_77898100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083132	chr18	+	187	1	Intergenic	novelGene_2556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCATGGCTTCCTTTGCT	NA	False	NA	NA	False	NA	NA	NA	77917031	77917218	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_77917000_77917200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083135	chr18	+	188	1	Intergenic	novelGene_2557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGATATTATAATTCTAAA	NA	False	NA	NA	False	NA	NA	NA	77928844	77929032	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_77928800_77929000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083169	chr18	-	4981	4	NNC	ENSMUSG00000053950.11	novel	5012	4	NA	NA	3	-32	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_3	66.5131565932636	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTGTTCAATTCTTGT	5939	False	NA	55	True	ATTAAA	-21	NA	80194694	80169557	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr18_-_80174210_80180698_80180789_80185863_80185985_80194576
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083175	chr18	+	208	1	Intergenic	novelGene_2558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTCTGCATTATCTTT	4653	False	NA	NA	False	NA	NA	NA	80211847	80212055	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_80211800_80212100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083183	chr18	+	197	1	Intergenic	novelGene_2559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGCATCACTCATAGGGA	NA	False	NA	NA	False	NA	NA	NA	80228546	80228743	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_80228500_80228700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083190	chr18	-	1382	6	FSM	ENSMUSG00000024570.8	ENSMUST00000025462.7	1377	6	-1	-4	-1	4	multi-exon	FALSE	canonical	3	236	junction_3	30.0026665481587	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTGTATACGCACAATG	NA	False	NA	1	True	AATAAA	-24	NA	80243874	80235475	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_80236098_80236446_80236515_80238233_80238319_80240464_80240578_80240878_80241099_80243600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083201	chr18	+	1707	4	FSM	ENSMUSG00000024571.16	ENSMUST00000125127.8	1683	4	-17	-7	16	-2	multi-exon	FALSE	canonical	3	1096	junction_3	900.996608699993	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGTTGTGGGAATTCAT	NA	False	NA	NA	False	AATAAA	-19	NA	80249995	80255954	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_80250117_80250368_80250559_80253276_80253346_80254627
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083227	chr18	+	2929	3	FSM	ENSMUSG00000024571.16	ENSMUST00000145116.8	968	3	9	-1970	-7	-4	multi-exon	FALSE	canonical	3	1244	junction_2	916.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTTTGTTGTGGGAATTC	NA	False	NA	NA	False	AATAAA	-17	NA	80250053	80255952	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_80250117_80250368_80250559_80253276
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083240	chr18	+	1633	4	FSM	ENSMUSG00000024571.16	ENSMUST00000025463.14	1650	4	28	-11	0	2	multi-exon	FALSE	canonical	3	109	junction_1	503.796475661441	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACACGTTTGTTGTGGGAA	NA	False	NA	NA	False	AATAAA	-14	NA	80250109	80255949	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_80250162_80250368_80250559_80253276_80253346_80254627
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083244	chr18	+	1748	4	FSM	ENSMUSG00000024571.16	ENSMUST00000127234.8	1755	4	0	7	0	2	multi-exon	FALSE	canonical	3	221	junction_1	451.424658411813	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACACGTTTGTTGTGGGAA	NA	False	NA	NA	False	AATAAA	-14	NA	80250109	80255949	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_80250277_80250368_80250559_80253276_80253346_80254627
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083252	chr18	-	1820	1	Antisense	novelGene_ENSMUSG00000024571.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCCAAAATTTATCATCAC	4855	False	NA	NA	False	NA	NA	NA	80252587	80250767	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr18_-_80250800_80252600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083264	chr18	-	3724	13	FSM	ENSMUSG00000033323.15	ENSMUST00000036229.13	3713	13	-11	0	-11	0	multi-exon	FALSE	canonical	3	130	junction_8	21.1126278694898	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTCTCTGGTGTGTCAC	NA	False	NA	-3	True	AATAAA	-18	NA	80512921	80451173	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_80451997_80463657_80463846_80477380_80477544_80489100_80489311_80490638_80490781_80492455_80493464_80494369_80494537_80495519_80495611_80499168_80499320_80501911_80502041_80502416_80502511_80503144_80503229_80512447
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083274	chr18	-	185	1	Intergenic	novelGene_2560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGTCTAGAGTGATCT	NA	False	NA	NA	False	NA	NA	NA	80543408	80543223	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_80543200_80543400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083306	chr18	+	189	1	Intergenic	novelGene_2561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTGGCCAGAGCATTGTG	NA	False	NA	NA	False	NA	NA	NA	82729792	82729981	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_82729800_82730000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083314	chr18	+	216	1	Intergenic	novelGene_2562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCCCCATGCGTGAGGA	NA	False	NA	NA	False	AATAAA	-18	NA	82954418	82954634	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_82954400_82954600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083319	chr18	+	5727	5	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15040	-39	at_least_one_novel_splicesite	FALSE	canonical	3	187	junction_2	10.2713192920871	54	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCCCTCTTTTAGAAGG	NA	False	NA	13	True	AATAAA	-27	NA	82990892	83023400	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr18_+_82990974_83004868_83006324_83011194_83011315_83012594_83012663_83019397
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083337	chr18	-	7905	9	FSM	ENSMUSG00000048410.18	ENSMUST00000125763.3	7909	9	0	4	0	-4	multi-exon	FALSE	canonical	3	22	junction_4	5.699506557589	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTGGTGGTGTACTAA	NA	False	NA	NA	False	AATAAA	-16	NA	84607629	84225829	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_84228207_84333930_84334110_84361070_84361192_84369024_84369109_84372649_84372817_84450484_84450560_84570994_84571110_84576451_84581172_84607562
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083345	chr18	-	2109	12	FSM	ENSMUSG00000024644.18	ENSMUST00000025546.17	2124	12	15	0	15	0	multi-exon	FALSE	canonical	3	418	junction_11	64.2627612178223	319	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCGTGGTCTGACTTTCT	NA	False	NA	2	True	AATAAA	-25	NA	84703812	84685589	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_84686226_84686662_84686811_84687055_84687198_84687921_84688087_84688877_84689039_84690198_84690284_84693101_84693303_84695443_84695533_84696832_84696996_84699059_84699204_84699962_84700053_84703727
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083353	chr18	+	200	1	Intergenic	novelGene_2563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCCTTCTTCAGATCGAA	467	False	NA	NA	False	NA	NA	NA	84713004	84713204	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_84713000_84713200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083358	chr18	+	209	1	Intergenic	novelGene_2564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGTAAAGGTCTATGATG	NA	False	NA	NA	False	AATAAA	-9	NA	84810603	84810812	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_84810600_84810800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083366	chr18	+	828	5	FSM	ENSMUSG00000024646.15	ENSMUST00000160180.9	833	5	5	0	5	0	multi-exon	FALSE	canonical	3	946	junction_4	54.2425110038243	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGTCTGTTTGGTGT	NA	False	NA	19	True	AATATA	-24	NA	84869467	84897996	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_84869733_84889629_84889759_84891264_84891295_84895951_84895987_84897627
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083375	chr18	+	182	1	Intergenic	novelGene_2565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	84925747	84925929	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_84925700_84925900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083388	chr18	+	2086	10	FSM	ENSMUSG00000034391.13	ENSMUST00000224467.3	1910	10	-173	-3	-173	3	multi-exon	FALSE	canonical	3	723	junction_3	71.0602248487546	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTGTCTTATTTTCT	627	False	NA	29	True	AATAAA	-18	NA	84952733	84999601	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_84953306_84975444_84975556_84976396_84976502_84977193_84977437_84978134_84978345_84980718_84980846_84982233_84982317_84983555_84983711_84995491_84995617_84999246
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083398	chr18	-	186	1	Intergenic	novelGene_2566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGATATCTATAAGGAAATA	NA	False	NA	NA	False	NA	NA	NA	86003891	86003705	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_-_86003700_86003900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083413	chr18	-	3002	3	FSM	ENSMUSG00000056153.16	ENSMUST00000070116.12	6036	3	-19	3053	-2	-48	multi-exon	FALSE	canonical	3	70	junction_1	76	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATCTGAATAGAAAGGTT	NA	False	NA	NA	False	ATTAAA	-20	NA	88912465	88886345	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_-_88889043_88905332_88905458_88912285
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083434	chr18	+	188	1	Intergenic	novelGene_2567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCAGAAATACTCACTTG	NA	False	NA	NA	False	NA	NA	NA	89969301	89969489	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_89969300_89969500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083442	chr18	+	4564	16	FSM	ENSMUSG00000024614.8	ENSMUST00000025515.7	4611	16	39	8	-4	-8	multi-exon	FALSE	canonical	3	189	junction_13	15.4033185457622	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCATAATTGCTACCTTTA	4781	False	NA	17	True	AATAAA	-17	NA	90528316	90561383	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083452	chr18	+	190	1	Intergenic	novelGene_2568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGTGTTTCAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90595094	90595284	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr18_+_90595100_90595300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083459	chr18	+	1973	4	FSM	ENSMUSG00000110277.3	ENSMUST00000211710.2	2003	4	36	-6	-12	0	multi-exon	FALSE	canonical	3	89	junction_2	1.63299316185545	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTCTTGGTCATAGTA	NA	False	NA	9	True	NA	NA	NA	90597936	90610652	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr18_+_90598024_90607079_90607207_90607397_90607459_90608954
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083463	chr19	-	186	1	Intergenic	novelGene_2569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	3256753	3256567	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_3256600_3256800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083482	chr19	+	821	7	FSM	ENSMUSG00000024829.13	ENSMUST00000025743.7	802	7	-18	-1	-13	1	multi-exon	FALSE	canonical	3	1715	junction_6	72.3058703625708	253	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGACTTGCTGTTAAAG	7353	False	NA	14	True	NA	NA	NA	3333041	3341202	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_3333172_3334759_3334818_3335309_3335396_3336874_3337039_3337702_3337756_3338983_3339088_3340976
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083494	chr19	+	109	1	Intergenic	novelGene_2570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGAATGCCAGCAGCT	NA	False	NA	NA	False	NA	NA	NA	3365108	3365217	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_3365100_3365200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083518	chr19	-	4815	23	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_22	86.8173369782787	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	3625755	3504927	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3625640
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083523	chr19	-	4689	22	NIC	ENSMUSG00000024908.16	novel	4841	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	106	junction_9	104.600590087781	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	3625716	3504927	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3625640
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083524	chr19	-	4876	23	FSM	ENSMUSG00000024908.16	ENSMUST00000025846.16	4841	23	-35	0	-6	0	multi-exon	FALSE	canonical	3	106	junction_9	88.0225482945391	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	3625755	3504927	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083534	chr19	-	4919	24	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_22	106.049298376747	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	3625716	3504927	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576930_3594107_3594256_3625640
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083537	chr19	-	4967	24	FSM	ENSMUSG00000024908.16	ENSMUST00000113997.9	4952	24	-10	-5	-10	0	multi-exon	FALSE	canonical	3	249	junction_9	67.9031613363524	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	3625759	3504927	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083550	chr19	-	4873	24	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_9	100.351876189837	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	3625716	3504927	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523816_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083576	chr19	+	206	1	Intergenic	novelGene_2571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATGGTTCTGGAAGGCAA	NA	False	NA	NA	False	NA	NA	NA	3567032	3567238	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_3567000_3567200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083581	chr19	+	170	1	Intergenic	novelGene_2572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTTAAAAAGAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	3612566	3612736	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_3612600_3612700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083584	chr19	+	198	1	Intergenic	novelGene_2573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTAAGCTGGGCGTGGT	NA	False	NA	NA	False	NA	NA	NA	3616060	3616258	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_3616100_3616300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083599	chr19	-	204	1	Intergenic	novelGene_2574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGTGTGGTGATGCACT	NA	False	NA	NA	False	NA	NA	NA	3638785	3638581	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_3638600_3638800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083608	chr19	+	194	1	Intergenic	novelGene_2575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTTTCTAAATTAAGACA	NA	False	NA	NA	False	NA	NA	NA	3728629	3728823	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_3728600_3728800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083615	chr19	+	190	1	Intergenic	novelGene_2576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAATGAAATTAATGGGA	NA	False	NA	NA	False	NA	NA	NA	3756097	3756287	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_3756100_3756300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083621	chr19	+	1936	4	FSM	ENSMUSG00000035372.3	ENSMUST00000039048.2	1882	4	-53	-1	-13	1	multi-exon	FALSE	canonical	3	184	junction_1	53.9897109539298	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTGGGTCTGTGTGT	NA	False	NA	12	True	ATTAAA	-24	NA	3758279	3767882	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_3758437_3764403_3764626_3765637_3765803_3766490
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083627	chr19	+	1914	4	FSM	ENSMUSG00000035372.3	ENSMUST00000237320.2	772	4	6	-1148	6	1	multi-exon	FALSE	canonical	3	113	junction_1	87.4541149530554	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTGGGTCTGTGTGT	NA	False	NA	12	True	ATTAAA	-24	NA	3758298	3767882	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_3758437_3764406_3764626_3765637_3765803_3766490
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083647	chr19	+	174	1	Intergenic	novelGene_2577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAATGTGTGGCTTTA	NA	False	NA	NA	False	NA	NA	NA	3804732	3804906	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_3804700_3804900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083652	chr19	-	255	1	Intergenic	novelGene_2578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCTATCTATCTATCTAT	NA	False	NA	NA	False	NA	NA	NA	3812070	3811815	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_3811800_3812100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083655	chr19	+	2870	10	FSM	ENSMUSG00000045098.20	ENSMUST00000113970.8	2975	10	105	0	4	0	multi-exon	FALSE	canonical	3	179	junction_9	36.6093828625975	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTCTTGAGTCTGG	NA	False	NA	56	True	AATAAA	-15	NA	3818137	3858835	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3854834_3854916_3855054_3857224
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083688	chr19	+	190	1	Intergenic	novelGene_2579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAATCCCTTATCTACCA	NA	False	NA	NA	False	NA	NA	NA	3879017	3879207	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_3879000_3879200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083716	chr19	-	2667	20	FSM	ENSMUSG00000001750.17	ENSMUST00000001801.11	2688	20	21	0	0	0	multi-exon	FALSE	canonical	3	39	junction_12	8.58007741992203	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCTGTCCTCTCTG	NA	False	NA	0	True	AATAAA	-20	NA	3957112	3946049	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_3946193_3946269_3946448_3946603_3946722_3946794_3946903_3947037_3947170_3947467_3947682_3947757_3947877_3948547_3948639_3948717_3948876_3948979_3949120_3951890_3952036_3952343_3952557_3952630_3952725_3952881_3952965_3953045_3953173_3953339_3953429_3953508_3953730_3954216_3954296_3954584_3954706_3957018
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083730	chr19	-	970	7	FSM	ENSMUSG00000059734.8	ENSMUST00000075092.8	983	7	17	-4	17	0	multi-exon	FALSE	canonical	3	209	junction_6	645.480290601933	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTGTTGTTCCATTT	NA	False	NA	-1	True	CATAAA	-22	NA	3962717	3958862	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962466
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083735	chr19	-	790	7	FSM	ENSMUSG00000059734.8	ENSMUST00000237341.2	780	7	-6	-4	-6	0	multi-exon	FALSE	canonical	3	1174	junction_6	307.096076171611	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTGTTGTTCCATTT	NA	False	NA	-1	True	CATAAA	-22	NA	3962780	3958862	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962709
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083747	chr19	-	963	7	FSM	ENSMUSG00000059734.8	ENSMUST00000235847.2	977	7	17	-3	17	0	multi-exon	FALSE	canonical	3	34	junction_6	709.089557108268	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACCTGTTGTGTTGTTCC	NA	False	NA	-5	True	CATAAA	-18	NA	3962717	3958866	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962469
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083754	chr19	+	1283	8	FSM	ENSMUSG00000024866.11	ENSMUST00000236510.2	1284	8	3	-2	2	0	multi-exon	FALSE	canonical	3	15	junction_1	10.3332236114429	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACAGTTCTTGTTCTTTG	NA	False	NA	5	True	TATAAA	-19	NA	4036572	4040007	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_4036612_4036822_4036952_4037050_4037306_4037730_4037924_4038137_4038232_4038397_4038506_4038605_4038716_4039652
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083772	chr19	-	1596	10	FSM	ENSMUSG00000037916.15	ENSMUST00000042497.14	1661	10	62	3	15	2	multi-exon	FALSE	canonical	3	1250	junction_6	107.070877644232	407	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTGGAACTTTGCTT	6488	False	NA	0	True	AATAAA	-27	NA	4062744	4057499	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061429_4062550
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083783	chr19	-	185	1	Intergenic	novelGene_2580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTATTTTAAAGAAGAA	6393	False	NA	NA	False	NA	NA	NA	4072111	4071926	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_4071900_4072100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083802	chr19	-	996	6	ISM	ENSMUSG00000038155.12	ENSMUST00000042700.12	797	7	27	0	-18	0	intron_retention	FALSE	canonical	3	1402	junction_5	871.235766024329	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGTCTTTGGTGCCGTT	NA	False	NA	NA	False	AATAAA	-16	NA	4092236	4090284	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr19_-_4090540_4090707_4090816_4090981_4091086_4091397_4091486_4091583_4091691_4091902
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083811	chr19	+	189	1	Intergenic	novelGene_2581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATGTATTTATTTATCAT	1794	False	NA	NA	False	NA	NA	NA	4142099	4142288	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_4142100_4142300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083813	chr19	+	187	1	Intergenic	novelGene_2582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGAGATTTATTTAGCTG	5266	False	NA	NA	False	NA	NA	NA	4145571	4145758	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_4145600_4145800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083819	chr19	+	917	4	FSM	ENSMUSG00000024856.11	ENSMUST00000025779.11	1080	4	165	-2	-54	0	multi-exon	FALSE	canonical	3	620	junction_3	36.1754981536767	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTCTGTGTGTGGTTCC	7041	False	NA	36	True	AATAAA	-25	NA	4147346	4149019	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_4147508_4147816_4147918_4148004_4148138_4148497
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083837	chr19	-	1260	6	FSM	ENSMUSG00000024847.16	ENSMUST00000025767.14	1261	6	6	-5	6	5	multi-exon	FALSE	canonical	3	269	junction_5	15.3310143173894	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCAGAACTAATCTATCT	3908	False	NA	-16	True	TATAAA	-22	NA	4171569	4164458	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_4164797_4165080_4165223_4165319_4165497_4165981_4166171_4168086_4168267_4171335
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083843	chr19	+	950	7	FSM	ENSMUSG00000024845.20	ENSMUST00000140267.10	938	7	-7	-5	-7	0	multi-exon	FALSE	canonical	3	568	junction_2	70.8411760364142	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAGTTGCACTTTCCTGG	4363	False	NA	NA	False	AATAAA	-21	NA	4175951	4181731	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_4176200_4177055_4177121_4177548_4177639_4177758_4177836_4181029_4181075_4181227_4181282_4181360
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083861	chr19	+	887	6	FSM	ENSMUSG00000024845.20	ENSMUST00000150627.11	1472	6	10	575	-5	0	multi-exon	FALSE	canonical	3	226	junction_4	186.716255318063	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAGTTGCACTTTCCTGG	4381	False	NA	NA	False	AATAAA	-21	NA	4175969	4181731	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_4176200_4177055_4177121_4177548_4177639_4177758_4177836_4181227_4181282_4181360
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083880	chr19	+	1870	11	NIC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	4	0	combination_of_known_junctions	TRUE	canonical	3	159	junction_1	140.317354593079	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGACCTACTGTTGTGG	3579	False	NA	18	True	AATAAA	-19	NA	4198621	4204034	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_+_4198722_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203595
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083884	chr19	+	1884	11	FSM	ENSMUSG00000024835.16	ENSMUST00000008893.9	1888	11	4	0	4	0	multi-exon	FALSE	canonical	3	251	junction_1	114.751906302248	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGACCTACTGTTGTGG	3579	False	NA	18	True	AATAAA	-19	NA	4198621	4204034	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_4198736_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203595
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083905	chr19	-	1761	15	FSM	ENSMUSG00000024830.18	ENSMUST00000025749.15	4586	15	25	2800	1	1	multi-exon	FALSE	canonical	2	38	junction_6	17.8245416691225	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGCTTTTGCCGGACTCC	2774	False	NA	2	True	AGTAAA	-18	NA	4213328	4206789	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208608_4208717_4208827_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4211066_4211215_4212258_4212328_4212601_4212723_4212820_4212862_4213166
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083908	chr19	-	1863	14	NIC	ENSMUSG00000024830.18	novel	1753	15	NA	NA	-5	0	intron_retention	FALSE	canonical	3	79	junction_5	10.8698595277881	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGGCTTTTGCCGGACTC	2782	False	NA	1	True	AGTAAA	-17	NA	4213320	4206790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208608_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4211066_4211215_4212258_4212328_4212601_4212723_4212820_4212862_4213166
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083920	chr19	+	1428	7	FSM	ENSMUSG00000040385.8	ENSMUST00000046094.6	1473	7	50	-5	-44	5	multi-exon	TRUE	canonical	3	3675	junction_3	183.825475806689	655	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGTCTCTCTTGTCCC	3327	False	NA	36	True	AATAAA	-25	NA	4242113	4245424	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_4242271_4242743_4242876_4243020_4243252_4243765_4243871_4244465_4244690_4244770_4244906_4244980
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083932	chr19	-	2118	11	FSM	ENSMUSG00000024824.8	ENSMUST00000025740.8	2081	11	-37	0	-11	0	multi-exon	FALSE	canonical	3	334	junction_4	40.0660704337224	220	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTGTGTTCCCCGTGAC	5961	False	NA	0	True	AATAAA	-15	NA	4251672	4245194	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083970	chr19	-	5345	10	NIC	ENSMUSG00000054611.18	novel	8578	21	NA	NA	-23	26	combination_of_known_junctions	FALSE	canonical	3	31	junction_9	36.3402983470227	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCCCTTTCATTTTTGG	4148	False	NA	33	True	AATAAA	-20	NA	4384052	4366171	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4383670
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083980	chr19	+	188	1	Intergenic	novelGene_2583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGAAACGAGAATGTACTT	NA	False	NA	NA	False	NA	NA	NA	4386218	4386406	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_4386200_4386400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083987	chr19	+	181	1	Intergenic	novelGene_2584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGCTGAGACAAGAAGCAA	NA	False	NA	NA	False	NA	NA	NA	4395901	4396082	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_4395900_4396100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083992	chr19	-	176	1	Intergenic	novelGene_2585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAATTTAGTTCA	NA	False	NA	NA	False	NA	NA	NA	4411162	4410986	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_4411000_4411200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000083999	chr19	-	240	1	Genic_Genomic	ENSMUSG00000054611.18	novel	NA	NA	NA	NA	8313	45	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAGATGTTTTGAGACAT	1820	False	NA	NA	False	AAAAAG	-19	NA	4438632	4438392	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr19_-_4438400_4438600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084006	chr19	+	189	1	Intergenic	novelGene_2586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTGAGATGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	4478228	4478417	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_4478200_4478400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084022	chr19	+	201	1	Intergenic	novelGene_2587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAACAACAACAAAAAGTC	NA	False	NA	NA	False	NA	NA	NA	4572732	4572933	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_4572700_4572900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084048	chr19	-	1424	8	FSM	ENSMUSG00000024889.6	ENSMUST00000025823.6	1425	8	3	-2	3	0	multi-exon	FALSE	canonical	3	266	junction_6	48.136286113662	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTCTTGGAACCTTGGG	NA	False	NA	-11	True	ATTAAA	-19	NA	4675665	4672620	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674712_4674792_4675040_4675125_4675220_4675324_4675460
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084081	chr19	-	1731	4	FSM	ENSMUSG00000094936.9	ENSMUST00000180248.8	2610	4	19	860	1	0	multi-exon	TRUE	canonical	3	26	junction_3	29.8923996285938	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTATGTGTGCTTTGAGAA	NA	False	NA	-4	True	AATAAA	-16	NA	4843910	4835180	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_4835596_4837388_4838071_4842425_4842849_4843699
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084098	chr19	-	1045	8	FSM	ENSMUSG00000034108.7	ENSMUST00000037246.7	1067	8	22	0	22	0	multi-exon	FALSE	canonical	3	527	junction_5	30.737864703499	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTCTCTGTGTTCTT	NA	False	NA	-7	True	ATTAAA	-20	NA	4889338	4875393	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_4875693_4875797_4875902_4875971_4876050_4882860_4882922_4883368_4883547_4884200_4884339_4888858_4888932_4889224
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084106	chr19	+	97	1	Intergenic	novelGene_2588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTCATATCTTGTAGCTGA	NA	False	NA	NA	False	NA	NA	NA	4895279	4895376	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_4895300_4895400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084115	chr19	+	1902	14	FSM	ENSMUSG00000083282.4	ENSMUST00000119694.3	1980	14	72	6	16	1	multi-exon	FALSE	canonical	3	86	junction_8	8.77530154238379	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTGGTGTAAGTGC	NA	False	NA	4	True	AATAAA	-15	NA	4905229	4910940	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_4905515_4905725_4905825_4906097_4906183_4906274_4906337_4906539_4906616_4907997_4908112_4908214_4908361_4908443_4908541_4908619_4908701_4909430_4909551_4909629_4909695_4909785_4909877_4910277_4910337_4910418
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084129	chr19	+	3619	2	FSM	ENSMUSG00000006463.14	ENSMUST00000162754.2	939	2	-1065	-1615	-2	0	multi-exon	TRUE	canonical	3	165	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTCTTTTTGTTTGTTT	NA	False	NA	22	True	NA	NA	NA	4928729	4935425	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_4930427_4933503
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084133	chr19	+	2526	3	FSM	ENSMUSG00000006463.14	ENSMUST00000006632.8	2558	3	32	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	34	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTCTTTTTGTTTGTTT	NA	False	NA	22	True	NA	NA	NA	4928731	4935425	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_4929058_4930148_4930427_4933503
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084147	chr19	-	2675	18	FSM	ENSMUSG00000063904.5	ENSMUST00000025851.4	2683	18	10	-2	10	2	multi-exon	TRUE	canonical	3	495	junction_17	96.7659038009169	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTGTATGTTTCTTTCT	NA	False	NA	-3	True	AATAAA	-19	NA	4978305	4957254	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4978247
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084152	chr19	-	2681	19	NNC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_15	254.515662037176	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGTGTATGTTTCTTT	NA	False	NA	-5	True	AATAAA	-17	NA	4978279	4957256	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973316_4973351_4973711_4973802_4976812_4977088_4978247
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084179	chr19	+	212	1	Intergenic	novelGene_2589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	490	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGCTAGAAACCATCTA	NA	False	NA	NA	False	NA	NA	NA	4975021	4975233	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_4975000_4975200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084192	chr19	+	826	5	FSM	ENSMUSG00000024902.6	ENSMUST00000025836.6	3045	5	168	2051	-15	4	multi-exon	FALSE	canonical	3	572	junction_2	14.5859521458148	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCAGCTTCTCTCCTGAG	3711	False	NA	14	True	AATAAA	-17	NA	5012342	5014976	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_5012544_5012906_5013003_5013353_5013448_5013533_5013694_5014701
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084220	chr19	+	1393	10	FSM	ENSMUSG00000080268.5	ENSMUST00000116567.4	1388	10	-5	0	-5	0	multi-exon	FALSE	canonical	3	224	junction_4	16.1528195757556	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGCTGATGTGTGGCTG	2725	False	NA	8	True	AATAAA	-19	NA	5091376	5099945	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_5091519_5095920_5096067_5096163_5096255_5096421_5096550_5096677_5096758_5096842_5096940_5097419_5097513_5098536_5098602_5099020_5099061_5099434
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084231	chr19	+	173	1	Intergenic	novelGene_2590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	5127560	5127733	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_5127600_5127700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084239	chr19	+	1122	8	FSM	ENSMUSG00000024875.6	ENSMUST00000025811.6	1488	8	-10	376	-3	0	multi-exon	FALSE	canonical	3	484	junction_7	32.2509294281512	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTGACCCTGGTTCC	NA	False	NA	26	True	NA	NA	NA	5138562	5142533	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_5138777_5139446_5139659_5139799_5139905_5140031_5140111_5141395_5141454_5141568_5141725_5142156_5142251_5142329
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084250	chr19	-	1877	6	FSM	ENSMUSG00000024870.7	ENSMUST00000025804.7	1913	6	36	0	-31	0	multi-exon	FALSE	canonical	3	994	junction_1	78.6628247649422	603	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTGGTGACTGAGTGTGG	1537	False	NA	0	True	AATAAA	-43	NA	5157064	5149232	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_5150601_5150694_5150827_5154668_5154765_5154860_5154957_5155205_5155279_5156952
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084261	chr19	-	2945	16	NIC	ENSMUSG00000024862.17	novel	2940	16	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	36	junction_15	17.0507738501479	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGCTTGTTTTGAGGAGTC	NA	False	NA	0	True	AATAAA	-19	NA	5168326	5157772	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5163968_5164200_5167221_5167498_5168149
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084269	chr19	-	2907	16	FSM	ENSMUSG00000024862.17	ENSMUST00000116563.8	3169	16	262	0	0	0	multi-exon	FALSE	canonical	3	42	junction_15	16.0036107036992	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGCTTGTTTTGAGGAGT	NA	False	NA	-1	True	AATAAA	-18	NA	5168326	5157773	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5163968_5164200_5167221_5167461_5168149
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084280	chr19	-	4349	24	FSM	ENSMUSG00000024855.11	ENSMUST00000025786.9	4869	24	-5	525	-5	-525	multi-exon	FALSE	canonical	3	55	junction_19	9.30455099331212	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGGCTCCTGCCCCTCA	NA	False	NA	-1	True	AATAAA	-22	NA	5323152	5183710	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_5185054_5185147_5185268_5186720_5186948_5188957_5189094_5189307_5189351_5191187_5191231_5191634_5191738_5192271_5192383_5192543_5192699_5193378_5193486_5193802_5193908_5194827_5194964_5195098_5195215_5197154_5197236_5202301_5202396_5202687_5202849_5203691_5203752_5205716_5205798_5205883_5205976_5206384_5206530_5209995_5210122_5210745_5210836_5217951_5218040_5322566
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084287	chr19	+	204	1	Intergenic	novelGene_2591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTAGTTTGTTTCCCCAGT	NA	False	NA	NA	False	NA	NA	NA	5199570	5199774	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_5199600_5199800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084290	chr19	-	3261	21	FSM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	-19	-20	-19	20	multi-exon	TRUE	canonical	3	1448	junction_15	340.757138589935	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTAGTGTGTGTGTGTG	3847	False	NA	-5	True	AATAAA	-38	NA	5345502	5323939	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084308	chr19	-	3804	20	NIC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-2	0	intron_retention	FALSE	canonical	3	1448	junction_14	347.691994431407	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGGCTAACTACTTGGA	3911	False	NA	-25	True	AATAAA	-18	NA	5345438	5323959	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084317	chr19	-	799	5	ISM	ENSMUSG00000024853.11	ENSMUST00000235182.2	933	9	-8	3866	-3	65	5prime_fragment	FALSE	canonical	3	1668	junction_1	98.2445927265211	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCTTAATTGTTGTTT	3910	False	NA	-10	True	NA	NA	NA	5345439	5341166	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr19_-_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084326	chr19	-	761	3	FSM	ENSMUSG00000024844.16	ENSMUST00000025762.16	1261	3	505	-5	-57	5	multi-exon	FALSE	canonical	3	4588	junction_2	727	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGTGTCAGAGAGCAG	8686	False	NA	-1	True	AATAAA	-22	NA	5416691	5414660	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_5415187_5415845_5415985_5416595
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084344	chr19	-	757	3	FSM	ENSMUSG00000024844.16	ENSMUST00000170010.3	758	3	2	-1	2	0	multi-exon	FALSE	canonical	3	1351	junction_2	2345.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGTGTTCTGTGTCAG	8988	False	NA	-8	True	AATAAA	-15	NA	5416389	5414667	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_5415187_5415845_5415985_5416290
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084385	chr19	+	225	1	Intergenic	novelGene_2592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	458	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTCTTGTTGAGATGGT	1092	False	NA	NA	False	AATAAA	-32	NA	5451349	5451574	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_5451300_5451600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084393	chr19	-	186	1	Intergenic	novelGene_2593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGCTTTAAGAAACTGGG	5899	False	NA	NA	False	NA	NA	NA	5462597	5462411	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_5462400_5462600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084416	chr19	+	1510	2	FSM	ENSMUSG00000047423.11	ENSMUST00000159759.3	1528	2	0	18	0	-18	multi-exon	FALSE	canonical	3	164	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGAGTGTTTTTTACA	247	False	NA	16	True	AATAAA	-17	NA	5475171	5477323	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_5475337_5475978
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084428	chr19	+	1211	10	FSM	ENSMUSG00000024911.8	ENSMUST00000225141.2	1209	10	-1	-1	0	1	multi-exon	FALSE	canonical	3	126	junction_5	12.1837779216647	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGTCCTTGTTCCAGGT	NA	False	NA	18	True	AATAAA	-18	NA	5510642	5515080	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_5510807_5510988_5511188_5511417_5511545_5512559_5512661_5513198_5513333_5513631_5513741_5513814_5513879_5514156_5514244_5514361_5514460_5514952
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084438	chr19	+	1218	10	FSM	ENSMUSG00000024911.8	ENSMUST00000025847.7	1215	10	0	-3	0	1	multi-exon	FALSE	canonical	3	40	junction_5	35.2423706830007	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGTCCTTGTTCCAGGT	NA	False	NA	18	True	AATAAA	-18	NA	5510656	5515080	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_5510807_5510988_5511188_5511417_5511545_5512559_5512661_5513198_5513354_5513631_5513741_5513814_5513879_5514156_5514244_5514361_5514460_5514952
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084463	chr19	+	2348	4	FSM	ENSMUSG00000056201.9	ENSMUST00000209469.2	2354	4	23	-17	-7	17	multi-exon	FALSE	canonical	3	6173	junction_3	71.2850303749361	1515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCCGAGGGCTTATGTGG	NA	False	NA	NA	False	NA	NA	NA	5540505	5545246	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_5540631_5542524_5542833_5543182_5543260_5543408
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084472	chr19	+	1179	4	NNC	ENSMUSG00000056201.9	novel	2354	4	NA	NA	341	2	intron_retention	FALSE	canonical	3	171	junction_1	2854.92428387631	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTTTTGGGTTTGGGA	NA	False	NA	14	True	NA	NA	NA	5540933	5544059	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr19_+_5541077_5542524_5542833_5543182_5543260_5543408
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084477	chr19	+	218	1	Genic_Genomic	ENSMUSG00000056201.9	novel	NA	NA	NA	NA	4436	17	mono-exon	FALSE	NA	NA	NA	NA	NA	246	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCCGAGGGCTTATGTGG	NA	False	NA	NA	False	NA	NA	NA	5545028	5545246	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr19_+_5545000_5545200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084504	chr19	-	1821	13	FSM	ENSMUSG00000024926.11	ENSMUST00000236229.2	1386	13	-31	-404	-9	0	multi-exon	FALSE	canonical	3	222	junction_9	61.0948147463342	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATCAGGAGTTCTTACCA	3617	False	NA	-3	True	AATAAA	-18	NA	5660088	5653041	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5659263_5659401_5659490_5659560_5659879_5659947_5660045
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084523	chr19	-	1906	12	FSM	ENSMUSG00000024926.11	ENSMUST00000235701.2	1905	12	0	-1	0	0	multi-exon	FALSE	canonical	3	222	junction_9	58.4797768251612	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATCAGGAGTTCTTAC	3629	False	NA	-5	True	AATAAA	-16	NA	5660076	5653043	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5659263_5659401_5659490_5659560_5659879
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084527	chr19	-	2044	13	NIC	ENSMUSG00000024926.11	novel	2154	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	118	junction_9	100.21144312569	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATCAGGAGTTCTTAC	3629	False	NA	-5	True	AATAAA	-16	NA	5660076	5653043	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_-_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5658829_5658986_5659263_5659401_5659490_5659560_5659879_5659947_5660045
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084533	chr19	+	220	1	Intergenic	novelGene_2594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCAAGAGGCCAGCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5680672	5680892	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_5680700_5680900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084564	chr19	-	7042	35	FSM	ENSMUSG00000054874.13	ENSMUST00000113615.9	7264	35	222	0	9	0	multi-exon	TRUE	canonical	3	44	junction_25	21.6322679648029	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCAGTTTTATTTTCTG	NA	False	NA	-2	True	NA	NA	NA	5738714	5714662	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731582_5733304_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738024
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084571	chr19	+	3762	12	NIC	ENSMUSG00000004054.10	novel	2885	11	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	20.4999496068721	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATGTCACCTTTCTTGG	NA	False	NA	10	True	AATAAA	-22	NA	5738764	5752893	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_+_5738859_5739504_5739541_5739716_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084587	chr19	-	2547	5	FSM	ENSMUSG00000118125.2	ENSMUST00000160852.8	2532	5	-14	-1	-14	1	multi-exon	FALSE	canonical	3	87	junction_1	171.430744033852	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTGCCTGGTTAATT	NA	False	NA	-1	True	AATAAA	-17	NA	5781755	5778114	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_5778897_5779264_5780741_5781268_5781354_5781471_5781624_5781703
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084611	chr19	-	2646	17	FSM	ENSMUSG00000024941.10	ENSMUST00000236978.2	2731	17	11	74	-7	-1	multi-exon	FALSE	canonical	3	227	junction_12	26.041358331508	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTCCCAGCTCAGTCCA	9900	False	NA	-9	True	AATAAA	-15	NA	5821436	5808452	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084617	chr19	-	2621	17	FSM	ENSMUSG00000024941.10	ENSMUST00000236773.2	2395	17	10	-236	10	0	multi-exon	FALSE	canonical	3	43	junction_4	63.7916224417439	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTCCCAGCTCAGTC	9920	False	NA	-11	True	AATAAA	-13	NA	5821416	5808454	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809368_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084624	chr19	+	185	1	Intergenic	novelGene_2595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACTCTGGCTGAAAGGTG	NA	False	NA	NA	False	NA	NA	NA	5839738	5839923	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_5839700_5839900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084635	chr19	+	3081	1	Antisense	novelGene_ENSMUSG00000092274.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACGAGATTCAAAGGATAG	3265	False	NA	NA	False	NA	NA	NA	5881898	5884979	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr19_+_5881900_5885000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084640	chr19	-	3185	1	FSM	ENSMUSG00002076852.1	ENSMUST00020181828.1	152	1	-1043	-1990	-1043	1990	mono-exon	FALSE	NA	NA	NA	NA	NA	201	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCATGGCTGTTACATTC	9999	False	NA	-1	True	AATAAA	-26	NA	5895508	5892323	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_5892300_5895500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084655	chr19	-	2968	11	FSM	ENSMUSG00000024816.13	ENSMUST00000025728.13	4504	11	-1	1537	-1	-1537	multi-exon	FALSE	canonical	3	167	junction_1	18.6118241986109	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGGAATGGTTATAATAT	4334	False	NA	-22	True	AATAAA	-17	NA	5925303	5901266	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_5902771_5906612_5906818_5912278_5912423_5913251_5913376_5915096_5915322_5919464_5919632_5919763_5919823_5920038_5920141_5923196_5923365_5924737_5924823_5925118
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084667	chr19	+	197	1	Intergenic	novelGene_2596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTTATTATAT	NA	False	NA	NA	False	NA	NA	NA	5904103	5904300	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_5904100_5904300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084677	chr19	-	2641	11	FSM	ENSMUSG00000024826.16	ENSMUST00000136983.8	3314	11	56	617	-8	254	multi-exon	FALSE	canonical	3	642	junction_2	68.1739686390634	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGCATTTTCTCTGTAT	1328	False	NA	NA	False	TATAAA	-40	NA	5962843	5947160	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5952797_5954267_5954347_5954481_5954575_5955416_5955581_5956551_5956660_5957028_5957190_5962768
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084689	chr19	-	2451	18	FSM	ENSMUSG00000024833.16	ENSMUST00000025752.15	2421	18	-30	0	-30	0	multi-exon	FALSE	canonical	3	334	junction_17	37.0964328301216	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAATCTTTTTTTTTTCC	1596	False	NA	0	True	AATAAA	-21	NA	6014260	5990569	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084700	chr19	-	2419	18	NIC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	-31	-4	combination_of_known_junctions	FALSE	canonical	3	37	junction_17	91.7598792094124	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATTTTAATCTTTTTTTT	1595	False	NA	-4	True	AATAAA	-17	NA	6014261	5990573	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011215_6013853
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084712	chr19	+	199	1	Intergenic	novelGene_2597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGAAAGTCTTGTTTACT	NA	False	NA	NA	False	NA	NA	NA	6028741	6028940	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_6028700_6028900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084749	chr19	+	3010	16	FSM	ENSMUSG00000024807.19	ENSMUST00000138532.8	3464	16	460	-6	-25	6	multi-exon	FALSE	canonical	3	88	junction_11	13.9593059362642	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGTGTCACCTAGGGTAG	1199	False	NA	19	True	AATAAA	-22	NA	6097065	6103748	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_6097159_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099284_6099800_6099928_6100021_6100122_6100199_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6101341_6101422_6101610_6102357_6102510_6102577
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084778	chr19	+	569	5	FSM	ENSMUSG00000038274.14	ENSMUST00000178310.9	613	5	51	-7	-47	2	multi-exon	FALSE	canonical	3	11442	junction_1	1294.53167207295	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTTCATTTGTAAGG	1033	False	NA	11	True	AATAAA	-23	NA	6107924	6109556	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_6108032_6108272_6108356_6108457_6108603_6109173_6109230_6109378
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084779	chr19	+	560	5	FSM	ENSMUSG00000038274.14	ENSMUST00000043074.14	508	5	-48	-4	-47	1	multi-exon	FALSE	canonical	3	1236	junction_1	5677.26170790109	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATGTTTTCTTCATTT	1033	False	NA	5	True	AATAAA	-17	NA	6107924	6109550	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_6108032_6108275_6108356_6108457_6108603_6109173_6109230_6109378
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084806	chr19	-	1492	10	FSM	ENSMUSG00000024799.17	ENSMUST00000025713.12	1471	10	-21	0	4	0	multi-exon	FALSE	canonical	3	192	junction_3	30.8704981223334	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTTCTTCTATCC	9940	False	NA	0	True	AATAAA	-15	NA	6117893	6112850	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6116724_6116997_6117053_6117152_6117350_6117698
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084818	chr19	-	2519	10	FSM	ENSMUSG00000024797.15	ENSMUST00000025711.13	2675	10	11	145	11	3	multi-exon	FALSE	canonical	3	124	junction_7	16.3026923475166	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGCCTGCAGGGGCGGG	998	False	NA	0	True	AATAAA	-21	NA	6127250	6118016	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_6118406_6118884_6118973_6119055_6119178_6119494_6119714_6119887_6120104_6120468_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084840	chr19	-	1349	8	FSM	ENSMUSG00000024792.10	ENSMUST00000160977.8	922	8	-16	-411	-4	5	multi-exon	FALSE	canonical	3	381	junction_7	88.3658905474556	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCAGCTTTTTCCATCT	6452	False	NA	NA	False	AATAAA	-23	NA	6134961	6130786	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_6131245_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134091_6134381_6134492_6134824
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084867	chr19	-	1343	2	FSM	ENSMUSG00000024790.9	ENSMUST00000113533.3	1442	2	104	-5	104	5	multi-exon	FALSE	canonical	3	283	junction_1	0	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAACTTTTAGACTTCAT	NA	False	NA	-4	True	AATAAA	-30	NA	6168576	6166024	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_6166618_6167826
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084873	chr19	-	1597	8	FSM	ENSMUSG00000024787.15	ENSMUST00000025702.14	1635	8	38	0	38	0	multi-exon	FALSE	canonical	3	79	junction_5	6.49018096662888	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTCCATTTGCTTATTA	NA	False	NA	1	True	NA	NA	NA	6178296	6169428	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_6169985_6170515_6170774_6171408_6171553_6171812_6171961_6172069_6172186_6173859_6173981_6174182_6174219_6178078
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084895	chr19	+	194	1	Intergenic	novelGene_2598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGCAAATCCTCAGGGC	NA	False	NA	NA	False	NA	NA	NA	6198246	6198440	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_6198200_6198400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084904	chr19	-	2729	14	FSM	ENSMUSG00000024777.11	ENSMUST00000025695.10	2742	14	13	0	13	0	multi-exon	TRUE	canonical	3	82	junction_11	13.4199357135648	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGCTTGCTTTATTGAG	NA	False	NA	0	True	AATAAA	-14	NA	6285889	6277794	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_6278562_6278971_6279074_6279251_6279380_6280185_6280306_6280415_6280467_6280531_6280586_6280936_6281046_6281145_6281206_6282299_6282431_6282557_6282651_6282796_6282899_6283806_6284004_6284662_6285130_6285541
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084931	chr19	+	185	1	Genic_Genomic	ENSMUSG00000024773.16	novel	NA	NA	NA	NA	631	8	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGCACGTGGTGCAAAC	2372	False	NA	NA	False	NA	NA	NA	6302148	6302333	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr19_+_6302100_6302300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084948	chr19	+	189	1	Intergenic	novelGene_2599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAAGCCGGGCGTGGTGG	1417	False	NA	NA	False	NA	NA	NA	6377965	6378154	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_6378000_6378200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084953	chr19	+	179	1	Intergenic	novelGene_2600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGTCAAATTTTC	2203	False	NA	NA	False	NA	NA	NA	6378751	6378930	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_6378800_6378900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084963	chr19	+	2611	10	FSM	ENSMUSG00000024947.18	ENSMUST00000113504.10	2663	10	52	0	-8	0	multi-exon	TRUE	canonical	3	66	junction_1	106.997403914508	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGTATGTATGTGTTTC	606	False	NA	23	True	GATAAA	-23	NA	6385060	6390921	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_6385101_6385474_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084970	chr19	+	2985	9	FSM	ENSMUSG00000024947.18	ENSMUST00000056391.15	2975	9	-8	-2	-8	0	multi-exon	FALSE	canonical	3	360	junction_3	26.9153766460735	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGTATGTATGTGTTTC	606	False	NA	23	True	GATAAA	-23	NA	6385060	6390921	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000084979	chr19	+	2621	10	FSM	ENSMUSG00000024947.18	ENSMUST00000079327.12	2639	10	20	-2	-6	0	multi-exon	FALSE	canonical	3	89	junction_1	99.9901229690114	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGTATGTATGTGTTTC	608	False	NA	23	True	GATAAA	-23	NA	6385062	6390921	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_6385113_6385474_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085019	chr19	+	2669	13	FSM	ENSMUSG00000024949.18	ENSMUST00000113487.8	2649	13	-13	-7	-13	0	multi-exon	FALSE	canonical	3	364	junction_12	242.538814190407	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTCTTTTCTTTTAAA	821	False	NA	22	True	AATAAA	-22	NA	6413938	6427233	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6426325
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085033	chr19	+	2656	13	FSM	ENSMUSG00000024949.18	ENSMUST00000113489.8	2863	13	203	4	0	-3	multi-exon	FALSE	canonical	3	98	junction_10	368.940026366828	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGTCCGTTTCTTTTCTTT	834	False	NA	18	True	AATAAA	-18	NA	6413951	6427229	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424318_6424578_6424639_6424748_6424929_6426325
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085080	chr19	-	218	1	Intergenic	novelGene_2601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACGTGCATATATCTGAA	NA	False	NA	NA	False	NA	NA	NA	6484738	6484520	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_6484500_6484700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085089	chr19	-	228	1	Intergenic	novelGene_2602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	251	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGACCAACATGTCAGATACA	NA	False	NA	NA	False	NA	NA	NA	6730054	6729826	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_6729800_6730100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085121	chr19	+	1001	4	FSM	ENSMUSG00000038812.17	ENSMUST00000116551.10	985	4	-16	0	-16	0	multi-exon	TRUE	canonical	3	803	junction_1	23.6971634495683	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTTTCTCTTTGCAGCAA	9298	False	NA	16	True	ATTAAA	-16	NA	6887098	6888396	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_6887631_6887730_6887833_6887951_6888042_6888119
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085127	chr19	-	2251	7	FSM	ENSMUSG00000024955.16	ENSMUST00000025906.12	2241	7	-9	-1	-4	0	multi-exon	FALSE	canonical	3	79	junction_4	9.26762584963856	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTGGTCGGTGAGTCAC	9676	False	NA	0	True	AATATA	-17	NA	6899185	6888344	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_6889379_6889722_6889993_6890083_6890252_6891187_6891317_6891446_6891564_6897430_6897768_6898989
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085149	chr19	+	186	1	Intergenic	novelGene_2603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAGTTACAGGTGGTTG	NA	False	NA	NA	False	NA	NA	NA	6921710	6921896	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_6921700_6921900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085151	chr19	-	4283	31	FSM	ENSMUSG00000024960.10	ENSMUST00000025912.10	4257	31	-19	-7	-19	7	multi-exon	FALSE	canonical	3	577	junction_24	50.7714377272191	344	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGTAGTTTGGATGAA	4292	False	NA	-1	True	AATAAA	-23	NA	6947201	6931073	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085175	chr19	+	1025	4	FSM	ENSMUSG00000056612.8	ENSMUST00000070850.8	999	4	-26	0	-26	0	multi-exon	FALSE	canonical	3	3100	junction_3	78.5295415043848	367	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTGGCTGGTCTTTTA	1554	False	NA	NA	False	AATAAA	-29	NA	6952309	6954692	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_6952875_6953911_6953996_6954225_6954259_6954349
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085187	chr19	-	632	6	FSM	ENSMUSG00000056629.17	ENSMUST00000177752.9	664	6	37	-5	-24	2	multi-exon	FALSE	canonical	3	285	junction_5	164.60571071503	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGAGTCTGTATTTCTTT	NA	False	NA	-1	True	TTTAAA	-37	NA	6957832	6955106	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956510_6957761
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085206	chr19	-	1378	7	FSM	ENSMUSG00000024962.14	ENSMUST00000025914.7	1281	7	-96	-1	-96	1	multi-exon	FALSE	canonical	3	141	junction_2	52.2323867176508	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCTTCTGTCATTGTT	4662	False	NA	0	True	GATAAA	-18	NA	6965115	6959839	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_6960236_6962728_6962965_6963172_6963209_6963388_6963463_6963657_6963855_6964141_6964185_6964719
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085208	chr19	-	1277	7	FSM	ENSMUSG00000024962.14	ENSMUST00000130048.8	1158	7	-118	-1	-96	1	multi-exon	FALSE	canonical	3	113	junction_2	60.459352736639	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCTTCTGTCATTGTT	4662	False	NA	0	True	GATAAA	-18	NA	6965115	6959839	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_6960236_6962728_6962864_6963172_6963209_6963388_6963463_6963657_6963855_6964141_6964185_6964719
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085218	chr19	+	186	1	Intergenic	novelGene_2604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGTGAAGGGATTGGC	9785	False	NA	NA	False	NA	NA	NA	6960540	6960726	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_6960500_6960700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085226	chr19	-	869	7	NNC	ENSMUSG00000024963.13	novel	1074	6	NA	NA	-2	0	at_least_one_novel_splicesite	TRUE	canonical	3	48	junction_6	60.0194412947449	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9943	False	NA	-4	True	AATAAA	-17	NA	6969942	6965278	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr19_-_6965477_6965556_6965644_6966790_6966956_6967048_6967234_6968085_6968180_6969526_6969641_6969916
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085228	chr19	-	1057	6	FSM	ENSMUSG00000024963.13	ENSMUST00000025915.13	1074	6	16	1	16	-1	multi-exon	FALSE	canonical	3	154	junction_3	27.3978101314685	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCGATTCGGTCCTTCA	9292	False	NA	-5	True	AATAAA	-16	NA	6969855	6965279	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_6965477_6965556_6965644_6966790_6966956_6967048_6967234_6968085_6968180_6969526
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085244	chr19	+	199	1	Intergenic	novelGene_2605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAGGATCAGCAAGAAG	1593	False	NA	NA	False	NA	NA	NA	6978105	6978304	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_6978100_6978300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085251	chr19	+	188	1	Intergenic	novelGene_2606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCCAGGTTCAATTCCCA	4877	False	NA	NA	False	NA	NA	NA	6985506	6985694	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_6985500_6985700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085254	chr19	-	179	1	Intergenic	novelGene_2607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTGAGCACGAGTGT	-48	True	NA	NA	False	NA	NA	NA	6987740	6987561	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_6987600_6987700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085257	chr19	-	2175	14	FSM	ENSMUSG00000024966.10	ENSMUST00000025918.9	2108	14	-59	-8	-59	8	multi-exon	FALSE	canonical	3	2912	junction_9	209.620169317304	2733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTGACTTTCTTCTCTT	3704	False	NA	0	True	AATAAA	-37	NA	7017394	6998061	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863_7013074_7017247
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085266	chr19	-	107	1	Genic_Genomic	ENSMUSG00000024966.10	novel	NA	NA	NA	NA	19160	1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGGTCTCCAGTGACTTTC	4094	False	NA	-7	True	AATAAA	-30	NA	6998175	6998068	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr19_-_6998100_6998200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085274	chr19	+	1296	11	FSM	ENSMUSG00000036278.8	ENSMUST00000040261.7	1228	11	-63	-5	-63	5	multi-exon	FALSE	canonical	3	30	junction_9	10.4383906805599	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGGGTCTGGCTGGGT	8469	False	NA	11	True	AATAAA	-21	NA	7034114	7175427	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_7034551_7042832_7042935_7043454_7043572_7162940_7162971_7173778_7173896_7174153_7174276_7174369_7174401_7174515_7174590_7174896_7174979_7175066_7175102_7175277
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085282	chr19	+	173	1	Intergenic	novelGene_2608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCACTTTAGAGATTACAT	NA	False	NA	7	True	NA	NA	NA	7147520	7147693	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_7147500_7147700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085288	chr19	-	1680	7	FSM	ENSMUSG00000024767.12	ENSMUST00000025679.11	1713	7	31	2	31	-2	multi-exon	TRUE	canonical	3	1089	junction_1	76.373351955305	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGTCTGGCCCATGCA	NA	False	NA	0	True	AATAAA	-24	NA	7183650	7175568	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_7176605_7176736_7176932_7177027_7177113_7177307_7177427_7181422_7181522_7181754_7181817_7183566
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085303	chr19	+	206	1	Intergenic	novelGene_2609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATAACTGGCTGGGCATG	NA	False	NA	NA	False	NA	NA	NA	7188390	7188596	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_7188400_7188600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085307	chr19	+	228	1	Intergenic	novelGene_2610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGCACTTGGGAGGCAG	NA	False	NA	NA	False	NA	NA	NA	7190064	7190292	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_7190100_7190300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085312	chr19	-	569	2	FSM	ENSMUSG00000035885.6	ENSMUST00000039758.6	550	2	-19	0	-19	0	multi-exon	FALSE	canonical	3	12296	junction_1	0	1214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATCATGTCCTTCTGCAC	7347	False	NA	NA	False	AATAAA	-26	NA	7195000	7192517	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_7192850_7194763
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085327	chr19	-	141	1	Intergenic	novelGene_2611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAGAGCAAGCAGGGACT	10007	False	NA	NA	False	NA	NA	NA	7196274	7196133	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_7196100_7196300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085334	chr19	-	3251	8	FSM	ENSMUSG00000024764.11	ENSMUST00000025675.11	3231	8	-15	-5	-15	0	multi-exon	TRUE	canonical	3	441	junction_1	30.7431757816732	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGATGGCATCCAGATACT	NA	False	NA	-15	True	AATAAA	-21	NA	7218563	7203032	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_7205457_7205716_7205795_7207086_7207171_7207312_7207472_7207552_7207649_7211468_7211522_7212427_7212524_7218302
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085344	chr19	-	3308	6	FSM	ENSMUSG00000024764.11	ENSMUST00000237834.2	1569	6	17	-1756	-3	0	multi-exon	FALSE	canonical	3	441	junction_1	33.2060235499525	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGGATGGCATCCAG	NA	False	NA	-20	True	AATAAA	-16	NA	7218402	7203037	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_7205457_7205716_7205795_7207086_7207649_7211468_7211522_7212427_7212524_7218302
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085350	chr19	-	187	1	Intergenic	novelGene_2612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTATTATTTTTTATG	8266	False	NA	0	True	NA	NA	NA	7224726	7224539	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_7224500_7224700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085358	chr19	+	205	1	Intergenic	novelGene_2613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCCCTGGCCTCCAG	3268	False	NA	NA	False	NA	NA	NA	7225141	7225346	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_7225100_7225300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085367	chr19	-	179	1	Intergenic	novelGene_2614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATCTAATGCCAG	4682	False	NA	NA	False	NA	NA	NA	7228310	7228131	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_7228100_7228300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085376	chr19	-	131	1	Intergenic	novelGene_2615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAGAAATTGTCAT	2579	False	NA	NA	False	NA	NA	NA	7238642	7238511	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_7238500_7238600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085381	chr19	+	2330	13	NIC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	300.802676184904	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTTCCATGTGTGCTG	NA	False	NA	22	True	AATAAA	-17	NA	7244710	7252590	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_+_7244790_7246215_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085391	chr19	+	2914	12	FSM	ENSMUSG00000024968.15	ENSMUST00000066646.12	2823	12	-91	0	-91	0	multi-exon	FALSE	canonical	3	1016	junction_11	65.835633045581	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTTCCATGTGTGCTG	NA	False	NA	22	True	AATAAA	-17	NA	7245552	7252590	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085419	chr19	-	4627	18	FSM	ENSMUSG00000024969.16	ENSMUST00000165965.8	2874	18	-390	-1363	-4	0	multi-exon	FALSE	canonical	0	0	junction_3	87.3120720397554	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCTACTGTTCCTT	3897	False	NA	-1	True	AATAAA	-20	NA	7319188	7252760	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085438	chr19	+	212	1	Intergenic	novelGene_2616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAGAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	7321242	7321454	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_7321200_7321500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085445	chr19	-	1992	6	FSM	ENSMUSG00000024970.6	ENSMUST00000025924.4	3152	6	-63	1223	-63	0	multi-exon	FALSE	canonical	3	309	junction_2	10.2293694820355	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGGGCTATCATT	NA	False	NA	NA	False	AATAAA	-21	NA	7360422	7335050	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_7335853_7351021_7351220_7351386_7351513_7351660_7351811_7351885_7352216_7360036
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085447	chr19	-	2003	5	NIC	ENSMUSG00000024970.6	novel	3152	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	309	junction_2	11.4345966260293	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGGGCTATCATT	NA	False	NA	NA	False	AATAAA	-21	NA	7360358	7335050	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_-_7335853_7351021_7351220_7351386_7351513_7351660_7352216_7360036
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085462	chr19	+	5008	5	FSM	ENSMUSG00000053080.11	ENSMUST00000159348.3	4989	5	-19	0	-19	0	multi-exon	FALSE	canonical	3	16	junction_1	19.3713706278105	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGTGTTTTTTATTTA	NA	False	NA	NA	False	AATAAA	-20	NA	7394970	7403269	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_7395283_7397431_7397927_7398619_7399010_7399278_7399828_7400007
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085474	chr19	-	2846	7	FSM	ENSMUSG00000024758.16	ENSMUST00000088169.7	2762	7	-78	-6	1	6	multi-exon	FALSE	canonical	3	635	junction_1	35.2735343029618	346	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCAACTTTATTCTTTG	8961	False	NA	-12	True	AATAAA	-23	NA	7460645	7403259	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_7405241_7407115_7407175_7408350_7408398_7409330_7409401_7409816_7409956_7412295_7412504_7460303
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085485	chr19	+	192	1	Intergenic	novelGene_2617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGATTCGTGATGGGTGT	NA	False	NA	NA	False	NA	NA	NA	7458363	7458555	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_7458400_7458600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085492	chr19	+	191	1	Intergenic	novelGene_2618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGGAGCCCGGCGTGG	NA	False	NA	NA	False	NA	NA	NA	7476519	7476710	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_7476500_7476700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085504	chr19	+	211	1	Intergenic	novelGene_2619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGGCTGTGGAATGAC	NA	False	NA	NA	False	AAAAAG	-11	NA	8015745	8015956	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_8015700_8016000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085511	chr19	+	159	1	Intergenic	novelGene_2620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATTAATGATTGTTCTA	NA	False	NA	NA	False	NA	NA	NA	8180660	8180819	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_8180700_8180800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085515	chr19	-	1444	8	FSM	ENSMUSG00000010095.14	ENSMUST00000206598.2	1393	8	-29	-22	-29	22	multi-exon	FALSE	canonical	3	2940	junction_7	103.964868477534	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGACTTTCATCCTTCCT	NA	False	NA	1	True	AATAAA	-24	NA	8690378	8684928	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085517	chr19	-	1899	9	FSM	ENSMUSG00000010095.14	ENSMUST00000010239.6	1819	9	-28	-52	-28	22	multi-exon	FALSE	canonical	3	2610	junction_8	198.183902915953	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGACTTTCATCCTTCCT	NA	False	NA	1	True	AATAAA	-24	NA	8691271	8684928	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690705
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085533	chr19	-	2080	10	FSM	ENSMUSG00000010095.14	ENSMUST00000170157.8	2813	10	48	685	48	20	multi-exon	FALSE	canonical	3	190	junction_9	923.220423635268	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGACTTTCATCCTTC	9077	False	NA	-1	True	AATAAA	-22	NA	8700685	8684930	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690705_8691117_8700347
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085550	chr19	-	1768	10	NIC	ENSMUSG00000010095.14	novel	2813	10	NA	NA	107	17	combination_of_known_junctions	FALSE	canonical	3	39	junction_9	969.740642429844	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATTGTGACTTTCATCC	NA	False	NA	-4	True	AATAAA	-19	NA	8691353	8684933	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690705_8691117_8691324
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085553	chr19	+	190	1	Intergenic	novelGene_2621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTTGTTTGTTTTTGA	NA	False	NA	31	True	NA	NA	NA	8696532	8696722	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_8696500_8696700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085558	chr19	+	598	10	FSM	ENSMUSG00000108414.2	ENSMUST00000206155.2	605	10	9	-2	-3	2	multi-exon	FALSE	canonical	3	444	junction_1	203.637719952995	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGATGGCTTATTTGA	NA	False	NA	28	True	AATAAA	-17	NA	8700847	8703809	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_8700871_8701504_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085566	chr19	+	2960	1	FSM	ENSMUSG00000065087.3	ENSMUST00000083153.3	126	1	-2382	-452	-2382	452	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8700847	8703807	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_8700800_8703800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085579	chr19	+	1250	11	FSM	ENSMUSG00000042729.12	ENSMUST00000049424.11	1204	11	-41	-5	-29	5	multi-exon	FALSE	canonical	3	1012	junction_8	78.6635875103596	219	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTTTTGTGATGGGAGAA	934	False	NA	33	True	AATAAA	-26	NA	8713161	8717993	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_8713270_8713350_8713458_8713539_8713662_8715017_8715094_8715211_8715359_8715516_8715619_8716629_8716731_8716810_8716867_8717182_8717329_8717459_8717517_8717765
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085590	chr19	+	1832	11	FSM	ENSMUSG00000010110.18	ENSMUST00000176381.8	2251	11	-8	427	-8	0	multi-exon	FALSE	canonical	3	140	junction_1	18.8417090519942	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTTGATGTCATTTCT	6541	False	NA	12	True	NA	NA	NA	8718768	8733006	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_8718940_8719617_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085617	chr19	+	2328	21	FSM	ENSMUSG00000010097.16	ENSMUST00000010241.14	2326	21	1	-3	1	3	multi-exon	FALSE	canonical	3	621	junction_4	71.7857924661976	252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTGTTTCCCTCAATG	8570	False	NA	50	True	GATAAA	-29	NA	8734437	8748289	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085655	chr19	-	2047	12	FSM	ENSMUSG00000003680.17	ENSMUST00000176610.9	2065	12	18	0	-17	0	multi-exon	FALSE	canonical	3	151	junction_4	26.5722156514676	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACGTGTCTATGCTCGTG	9919	False	NA	-3	True	AATAAA	-14	NA	8763662	8751855	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198_8761359_8762485_8762543_8763573
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085661	chr19	+	196	1	Intergenic	novelGene_2622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGAGACACAGACAAAAACA	76	False	NA	NA	False	AAAAAG	-4	NA	8756809	8757005	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_8756800_8757000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085670	chr19	+	178	1	Intergenic	novelGene_2623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAAGTTTAATT	6562	False	NA	NA	False	NA	NA	NA	8763992	8764170	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_8764000_8764200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085680	chr19	-	894	8	FSM	ENSMUSG00000071662.5	ENSMUST00000096261.5	890	8	-4	0	-4	0	multi-exon	FALSE	canonical	3	1319	junction_5	79.6292429106959	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTTTGGTTTTATGT	NA	False	NA	-1	True	ATTAAA	-17	NA	8775945	8770490	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_8770769_8770989_8771024_8771499_8771572_8771665_8771732_8771843_8771895_8774599_8774760_8775587_8775698_8775822
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085688	chr19	+	1913	2	NNC	ENSMUSG00000071661.8	novel	2004	2	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGAACTGGTGTTGG	5365	False	NA	12	True	CATAAA	-17	NA	8779855	8782210	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr19_+_8779896_8780337
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085695	chr19	+	2057	2	FSM	ENSMUSG00000071661.8	ENSMUST00000172175.3	2004	2	-53	0	-53	0	multi-exon	FALSE	canonical	3	20	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGAACTGGTGTTGG	5375	False	NA	12	True	CATAAA	-17	NA	8779865	8782210	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_8780050_8780337
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085700	chr19	-	3533	4	FSM	ENSMUSG00000071660.11	ENSMUST00000096751.11	3509	4	-15	-9	-15	9	multi-exon	FALSE	canonical	3	197	junction_3	24.7116706571342	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAGAAATTTATTTCACT	1870	False	NA	-4	True	AATAAA	-20	NA	8796712	8786429	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_8789203_8793217_8793401_8795799_8796049_8796384
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085715	chr19	+	196	1	Intergenic	novelGene_2624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAACATAACTAAATCATG	NA	False	NA	NA	False	NA	NA	NA	8793638	8793834	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_8793600_8793800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085739	chr19	-	785	3	FSM	ENSMUSG00000071658.6	ENSMUST00000096259.6	1643	3	-16	874	-16	-874	multi-exon	TRUE	canonical	3	189	junction_2	8	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGTCTGTGTTAGCGTTC	4746	False	NA	-1	True	AATAAA	-22	NA	8816574	8815170	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_8815636_8815917_8816018_8816354
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085750	chr19	-	182	1	Intergenic	novelGene_2625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCCCGTGGGCTTATATA	NA	False	NA	NA	False	NA	NA	NA	8827320	8827138	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_8827100_8827300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085760	chr19	+	1114	10	FSM	ENSMUSG00000071655.13	ENSMUST00000166407.9	1033	10	-71	-10	-8	2	multi-exon	FALSE	canonical	3	339	junction_1	323.787653323045	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGGCTCCTTCCAGAAC	5841	False	NA	35	True	AATAAA	-23	NA	8848851	8853030	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_8848950_8849034_8849121_8849222_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085787	chr19	-	110	2	Genic_Genomic	ENSMUSG00000093314.3	novel	76	1	NA	NA	-1	315	multi-exon	FALSE	canonical	3	548	junction_1	0	238	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTTCGCTACCTTTT	NA	False	NA	-35	True	AATAAA	-19	NA	8866139	8865747	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr19_-_8865832_8866113
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085800	chr19	-	384	1	FSM	ENSMUSG00000070167.3	ENSMUST00000093658.3	148	1	-85	-151	-85	151	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCCTGTGTTCGCTACCT	NA	False	NA	-38	True	AATAAA	-16	NA	8866134	8865750	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_8865800_8866100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085806	chr19	+	2522	4	FSM	ENSMUSG00000071653.10	ENSMUST00000096251.10	806	4	30	-1746	-16	1746	multi-exon	FALSE	canonical	3	2965	junction_2	196.086715511276	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTTTTGTTTTTTTT	NA	False	NA	15	True	NA	NA	NA	8866246	8869991	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_8866329_8866487_8866613_8867366_8867465_8867774
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085822	chr19	+	3285	2	FSM	ENSMUSG00000071652.9	ENSMUST00000096249.7	3274	2	-9	-2	-9	2	multi-exon	FALSE	canonical	3	204	junction_1	0	238	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGTGTTTCTATCTGAC	NA	False	NA	22	True	AATAAA	-23	NA	8870359	8875254	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_8870513_8872122
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085837	chr19	+	3912	24	FSM	ENSMUSG00000071650.7	ENSMUST00000235274.2	3788	24	-57	-67	-21	67	multi-exon	FALSE	canonical	3	708	junction_5	142.157557894544	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTATAAGCTGCTTCAT	1842	False	NA	11	True	AGTAAA	-19	NA	8875413	8894103	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085846	chr19	+	3910	25	FSM	ENSMUSG00000071650.7	ENSMUST00000096246.5	3860	25	-50	0	-20	0	multi-exon	FALSE	canonical	3	261	junction_6	273.686404967234	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGTCTGAATTATACT	1843	False	NA	-56	True	GATAAA	-42	NA	8875414	8894036	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8885214_8885281_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085879	chr19	+	3450	22	FSM	ENSMUSG00000071647.6	ENSMUST00000224272.2	2978	22	-472	0	-131	0	multi-exon	FALSE	canonical	3	39	junction_2	11.2769706937285	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGGTGCTTTTGTGCG	1784	False	NA	6	True	AATAAA	-14	NA	8906784	8918946	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_8907317_8908162_8908335_8908410_8908669_8908753_8908868_8910605_8910674_8910786_8910911_8911133_8911305_8911450_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8914852_8914926_8915059_8915825_8915894_8916391_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085909	chr19	+	2767	9	FSM	ENSMUSG00000071645.7	ENSMUST00000096239.7	2753	9	-14	0	-14	0	multi-exon	FALSE	canonical	3	129	junction_7	18.3234822018087	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTTCTTTTGCATAC	1343	False	NA	11	True	AATAAA	-26	NA	8931196	8943574	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_8931386_8932750_8932942_8936450_8936767_8937106_8937208_8939707_8940187_8941383_8941494_8941627_8941739_8941924_8942018_8942397
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085915	chr19	+	1654	10	FSM	ENSMUSG00000071644.11	ENSMUST00000052248.8	1864	10	-82	292	-82	-292	multi-exon	FALSE	canonical	3	5201	junction_1	1272.81743475733	1318	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCCTGCCTCCTTTGT	761	False	NA	18	True	ATTAAA	-23	NA	8944322	8955551	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085927	chr19	+	1060	6	FSM	ENSMUSG00000069833.14	ENSMUST00000092955.11	830	6	-9	-221	2	21	multi-exon	FALSE	canonical	3	34	junction_5	17.6703140888893	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGTTTTGCGTACTTA	NA	False	NA	34	True	AATAAA	-35	NA	8966649	9054299	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_8966794_8977025_8977137_8977463_8977621_8978039_8978228_9014522_9014623_9053939
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085940	chr19	-	2005	7	FSM	ENSMUSG00000024654.9	ENSMUST00000049948.6	4195	7	21	2169	21	-2169	multi-exon	FALSE	canonical	3	393	junction_3	31.0344790336311	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGGTTAGGTGTCACT	NA	False	NA	NA	False	AATAAA	-21	NA	9112979	9089400	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_9090573_9091547_9091659_9093865_9093985_9095892_9096051_9096551_9096695_9112150_9112352_9112878
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085944	chr19	-	206	1	Intergenic	novelGene_2626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTGTTTCCTTGGATA	NA	False	NA	NA	False	TTTAAA	-5	NA	9189639	9189433	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_9189400_9189600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085952	chr19	+	1274	1	FSM	ENSMUSG00000067608.6	ENSMUST00000088040.6	781	1	-142	-351	-142	351	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAAGTGACCATAGGTAT	NA	False	NA	NA	False	AATAAA	-37	NA	9260601	9261875	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_9260600_9261900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085956	chr19	-	2566	2	Antisense	novelGene_ENSMUSG00000100141.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATGTCAACTTCTATAAT	NA	False	NA	NA	False	AAGAAA	-19	NA	9586818	9584169	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr19_-_9584950_9585032
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085964	chr19	+	201	1	Antisense	novelGene_ENSMUSG00000118138.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAAAAATCTCTCGCAGT	NA	False	NA	NA	False	NA	NA	NA	9843258	9843459	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr19_+_9843300_9843500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085974	chr19	-	3201	18	FSM	ENSMUSG00000024660.10	ENSMUST00000025562.9	3236	18	30	5	30	-5	multi-exon	FALSE	canonical	3	363	junction_14	47.6890156590894	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGTCTGCAGCAGTATG	NA	False	NA	-8	True	NA	NA	NA	9876885	9849664	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000085983	chr19	-	3078	19	NIC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	2	-60	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	145.134516148908	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAATGACTTTTAGTTTC	NA	False	NA	-26	True	AATAAA	-18	NA	9876851	9849765	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9860555_9860568_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086005	chr19	+	200	1	Intergenic	novelGene_2627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCATTGCTATAGTTGGG	4406	False	NA	NA	False	NA	NA	NA	9989511	9989711	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_9989500_9989700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086022	chr19	-	177	1	Intergenic	novelGene_2628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAAAGAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	10104900	10104723	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_10104700_10104900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086027	chr19	-	202	1	Intergenic	novelGene_2629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCATTGTTTTTAAAAAAAA	1776	False	NA	NA	False	NA	NA	NA	10120195	10119993	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_10120000_10120200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086041	chr19	+	3419	12	NNC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	-6	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	231.993480957141	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	18	True	AATAAA	-19	NA	10160296	10174238	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163848_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086052	chr19	+	1932	1	ISM	ENSMUSG00000010663.6	ENSMUST00000010807.6	3460	12	12055	0	1624	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	18	True	AATAAA	-19	NA	10172306	10174238	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr19_+_10172300_10174200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086056	chr19	-	2211	2	FSM	ENSMUSG00000024742.16	ENSMUST00000142241.2	2152	2	-49	-10	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTCTGAATGTTTGAAAA	2155	False	NA	NA	False	AATAAA	-20	NA	10181307	10176495	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_10178462_10181062
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086058	chr19	-	2222	2	FSM	ENSMUSG00000024742.16	ENSMUST00000025651.6	2341	2	125	-6	0	0	multi-exon	FALSE	canonical	3	832	junction_1	0	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTCTGAATGTTTGAAAA	2155	False	NA	NA	False	AATAAA	-20	NA	10181307	10176495	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_10178462_10181051
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086059	chr19	-	2106	2	FSM	ENSMUSG00000024742.16	ENSMUST00000116542.9	2100	2	0	-6	0	0	multi-exon	FALSE	canonical	3	443	junction_1	0	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTCTGAATGTTTGAAAA	2155	False	NA	NA	False	AATAAA	-20	NA	10181307	10176495	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_10178462_10181167
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086089	chr19	+	432	4	FSM	ENSMUSG00000036372.15	ENSMUST00000040372.14	606	4	172	2	-32	-2	multi-exon	FALSE	canonical	3	2797	junction_1	495.826806679734	309	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCATGTCCATTCTTAG	4149	False	NA	31	True	AATAAA	-20	NA	10181549	10185186	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_10181629_10183787_10183898_10184527_10184665_10185080
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086116	chr19	-	1972	4	FSM	ENSMUSG00000024668.9	ENSMUST00000025570.8	2981	4	-94	1103	-27	4	multi-exon	FALSE	canonical	3	201	junction_1	14.7196014438797	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTTTGATCTACATCC	NA	False	NA	NA	False	AATAAA	-21	NA	10502573	10479000	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_10480494_10494343_10494454_10494532_10494751_10502422
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086134	chr19	+	3605	10	FSM	ENSMUSG00000034820.5	ENSMUST00000038379.5	3500	10	-23	-82	-23	82	multi-exon	FALSE	canonical	3	152	junction_5	38.5749230894635	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCATTGAATAGATTTG	NA	False	NA	18	True	AATAAA	-23	NA	10502606	10525099	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_10502692_10503315_10503425_10509144_10509364_10510183_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086163	chr19	-	1429	5	NIC	ENSMUSG00000024666.7	novel	1529	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_4	52.1464284491278	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTGTCTTCATGGT	1786	False	NA	-4	True	AATAAA	-15	NA	10554450	10547841	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_-_10548633_10548892_10548969_10552200_10552373_10552603_10552876_10554332
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086184	chr19	+	2236	7	NIC	ENSMUSG00000034445.9	novel	2634	9	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	29.2845237853262	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTCTTTTGTTCAGAC	NA	False	NA	15	True	ATTAAA	-18	NA	10554817	10567194	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_+_10554928_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086193	chr19	+	2851	8	FSM	ENSMUSG00000034445.9	ENSMUST00000237814.2	3130	8	282	-3	0	3	multi-exon	FALSE	canonical	3	46	junction_1	19.4768308196049	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCTTTTGTTCAGACTG	NA	False	NA	17	True	ATTAAA	-20	NA	10554817	10567196	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_10555448_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086200	chr19	-	2439	18	FSM	ENSMUSG00000034371.10	ENSMUST00000236950.2	2437	18	-2	0	-2	0	multi-exon	FALSE	canonical	3	18	junction_17	12.9229818620786	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTTGTCCCTGTTTACA	9787	False	NA	-23	True	AATAAA	-17	NA	10582750	10569560	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_10570154_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10581531_10581638_10582582
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086208	chr19	-	2715	18	NIC	ENSMUSG00000034371.10	novel	2437	18	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_17	12.7406930547585	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGACTTTGTCCCTGTTTA	9787	False	NA	-25	True	AATAAA	-15	NA	10582750	10569562	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_-_10570154_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10581531_10581638_10582304
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086220	chr19	+	2690	5	FSM	ENSMUSG00000048832.10	ENSMUST00000087951.7	2686	5	-2	-2	-2	1	multi-exon	TRUE	canonical	3	85	junction_1	17.2699160391705	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGTCCATGATGAGTT	NA	False	NA	18	True	AATAAA	-21	NA	10666112	10691992	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_10666344_10683573_10683673_10687633_10687806_10688634_10688718_10689887
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086231	chr19	+	2680	5	FSM	ENSMUSG00000048832.10	ENSMUST00000235927.2	2690	5	12	-2	0	1	multi-exon	FALSE	canonical	3	21	junction_1	43.0145324280062	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGTCCATGATGAGTT	NA	False	NA	18	True	AATAAA	-21	NA	10666126	10691992	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_10666348_10683573_10683673_10687633_10687806_10688634_10688718_10689887
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086244	chr19	-	3498	11	FSM	ENSMUSG00000024736.16	ENSMUST00000025645.14	3657	11	150	9	-12	3	multi-exon	FALSE	canonical	3	39	junction_8	9.57131129992124	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGGTACTGCTGTGACA	NA	False	NA	-8	True	AATAAA	-18	NA	10847154	10835194	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_10836516_10836927_10837120_10837487_10837762_10838893_10839097_10840586_10840731_10840828_10841025_10841318_10841469_10842619_10842952_10843832_10844052_10844293_10844509_10846902
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086261	chr19	+	178	1	Intergenic	novelGene_2630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATCTTTTTTTATA	1887	False	NA	NA	False	NA	NA	NA	10861779	10861957	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_10861800_10862000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086269	chr19	+	187	1	Intergenic	novelGene_2631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGAAATAGGGGCTGGCG	4869	False	NA	NA	False	NA	NA	NA	10864761	10864948	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_10864800_10864900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086271	chr19	+	2134	16	FSM	ENSMUSG00000024735.14	ENSMUST00000025642.14	2134	16	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_6	13.7346277707115	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCAGCTTCTTGTGTCTG	NA	False	NA	15	True	ATTAAA	-21	NA	10872594	10882896	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_10872833_10874866_10875017_10875180_10875258_10876346_10876489_10876568_10876643_10876733_10876797_10877538_10877581_10877687_10877763_10878053_10878130_10878290_10878401_10879707_10879864_10880065_10880136_10880331_10880418_10880654_10880826_10881001_10881108_10882398
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086287	chr19	-	2096	4	FSM	ENSMUSG00000024732.8	ENSMUST00000025639.7	3003	4	0	907	0	-907	multi-exon	FALSE	canonical	3	231	junction_1	21.483844059096	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTGACAGGTACACTGA	NA	False	NA	NA	False	AATAAA	-13	NA	10926630	10919751	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_10920654_10920841_10920917_10922646_10922777_10925641
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086300	chr19	+	2699	4	FSM	ENSMUSG00000024683.7	ENSMUST00000167199.3	1162	4	-18	-1519	-18	1519	multi-exon	FALSE	canonical	3	302	junction_3	22.4499443206436	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTTGTGAGTTTCCT	143	False	NA	5	True	AATAAA	-14	NA	11747736	11753843	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_11747889_11748165_11748232_11750238_11750388_11751511
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086318	chr19	-	2821	11	FSM	ENSMUSG00000041488.17	ENSMUST00000069285.6	2810	11	-11	0	-11	0	multi-exon	FALSE	canonical	3	392	junction_5	58.7316779940774	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGGGCCATCTCTCTG	7126	False	NA	-8	True	AATAAA	-25	NA	11796317	11754848	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_11756538_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086329	chr19	+	190	1	Intergenic	novelGene_2632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAATATTTTTAAAAATT	NA	False	NA	NA	False	NA	NA	NA	11866555	11866745	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_11866600_11866700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086337	chr19	+	4225	19	FSM	ENSMUSG00000046139.9	ENSMUST00000061618.9	4216	19	0	-9	0	9	multi-exon	FALSE	canonical	3	210	junction_1	27.8366043764299	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCATCTCTTTTTGCTTT	NA	False	NA	30	True	AATAAA	-20	NA	11889762	11922464	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086352	chr19	+	213	1	Intergenic	novelGene_2633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGATTCTAAGT	NA	False	NA	NA	False	AATAAA	-10	NA	11900121	11900334	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_11900100_11900300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086357	chr19	+	178	1	Intergenic	novelGene_2634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTTAAAAAAAAGAATAA	2070	False	NA	4	True	NA	NA	NA	11915199	11915377	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_11915200_11915400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086364	chr19	-	217	2	Antisense	novelGene_ENSMUSG00000046139.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACTAATTATTCTTTTAC	NA	False	NA	NA	False	NA	NA	NA	11916112	11915202	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr19_-_11915373_11916065
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086365	chr19	-	212	2	Antisense	novelGene_ENSMUSG00000024687.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACTAATTATTCTTTTAC	3718	False	NA	NA	False	NA	NA	NA	11962460	11915202	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr19_-_11915373_11962418
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086376	chr19	+	4731	14	FSM	ENSMUSG00000024687.12	ENSMUST00000025590.11	4488	14	-241	-2	-241	2	multi-exon	FALSE	canonical	3	144	junction_3	15.1325504406969	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTGATTTGCTTCTA	NA	False	NA	11	True	ATTAAA	-18	NA	11943063	11971478	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_11943661_11948050_11948260_11951021_11951273_11955165_11955365_11955600_11955704_11955994_11956050_11956232_11956365_11961267_11961514_11961755_11961877_11965712_11965817_11966568_11966665_11967964_11968147_11968958_11969180_11969263
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086387	chr19	+	240	1	Intergenic	novelGene_2635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTACAAGATTAGGTTTC	3581	False	NA	NA	False	NA	NA	NA	11962220	11962460	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_11962200_11962500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086395	chr19	+	175	1	Intergenic	novelGene_2636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATAAAAAATTAAGAAAGTT	6749	False	NA	NA	False	NA	NA	NA	11965388	11965563	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_11965400_11965600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086401	chr19	-	188	1	Intergenic	novelGene_2637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCCTCGTACTTTCATG	NA	False	NA	NA	False	NA	NA	NA	12083598	12083410	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_12083400_12083600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086406	chr19	+	188	1	NIC	ENSMUSG00000050815.7	novel	2131	4	NA	NA	-522	-1422	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAATGCATGTCTAAA	NA	False	NA	NA	False	NA	NA	NA	12399106	12399294	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_+_12399100_12399300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086437	chr19	-	201	1	Intergenic	novelGene_2638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGAAATGTTCCTGTTCA	4098	False	NA	NA	False	NA	NA	NA	12792491	12792290	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_12792300_12792500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086466	chr19	-	4549	20	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_14	32.1687896093519	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGATTATTTTCTAATTA	NA	False	NA	-15	True	ATTAAA	-16	NA	14575415	14425512	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445636_14493722_14493740_14495135_14495341_14522151_14522227_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086475	chr19	+	200	1	Intergenic	novelGene_2639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGCAGCTATGAAGGACT	NA	False	NA	NA	False	NA	NA	NA	14510792	14510992	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_14510800_14511000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086482	chr19	-	2160	9	FSM	ENSMUSG00000024640.10	ENSMUST00000025542.10	2617	9	13	444	13	5	multi-exon	TRUE	canonical	3	2829	junction_2	225.154079188008	2007	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTGTGAATTATTCTGC	NA	False	NA	-9	True	ATTAAA	-25	NA	15902410	15882485	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086505	chr19	-	2576	15	FSM	ENSMUSG00000041491.9	ENSMUST00000047704.8	2548	15	-24	-4	-24	3	multi-exon	FALSE	canonical	3	141	junction_1	15.9123876785558	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGAGTGATAAAATACAG	151	False	NA	NA	False	AATAAA	-20	NA	15962377	15933133	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_15933768_15936895_15937065_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086519	chr19	-	187	1	Intergenic	novelGene_2640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTAAAATGGACATTGCTG	NA	False	NA	NA	False	NA	NA	NA	16647654	16647467	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_16647500_16647700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086521	chr19	+	212	1	Intergenic	novelGene_2641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGTAACTAGACAGTGGT	NA	False	NA	NA	False	NA	NA	NA	16684146	16684358	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_16684100_16684400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086530	chr19	-	175	1	Intergenic	novelGene_2642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAGAGTTATTATA	NA	False	NA	NA	False	NA	NA	NA	16824763	16824588	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_16824600_16824800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086541	chr19	-	4599	3	FSM	ENSMUSG00000038843.19	ENSMUST00000174236.8	4606	3	7	0	7	0	multi-exon	FALSE	canonical	3	31	junction_2	7	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTATGTCTGCACACATTA	8041	False	NA	2	True	AATAAA	-21	NA	17334024	17303504	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_17307853_17310473_17310621_17333920
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086550	chr19	+	2486	4	FSM	ENSMUSG00000024712.10	ENSMUST00000025617.4	2482	4	0	-4	0	4	multi-exon	FALSE	canonical	3	326	junction_3	47.0744091837593	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGTATCTGTTTGGGG	1324	False	NA	23	True	AATAAA	-38	NA	17371406	17378717	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_17371757_17372561_17372714_17375941_17376045_17376836
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086562	chr19	-	1342	10	FSM	ENSMUSG00000024725.14	ENSMUST00000025631.7	2726	10	-41	1425	-7	56	multi-exon	FALSE	canonical	3	989	junction_2	42.8315679128904	219	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCGATTCGATGTTACTT	NA	False	NA	-1	True	AATAAA	-20	NA	18609194	18558116	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_18558693_18562005_18562108_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573766_18581529_18581577_18608983
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086569	chr19	+	204	1	Intergenic	novelGene_2643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAATGCTGCGATCCAAAG	NA	False	NA	NA	False	NA	NA	NA	18566415	18566619	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_18566400_18566600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086571	chr19	+	1977	9	FSM	ENSMUSG00000037847.15	ENSMUST00000237347.2	1940	9	0	-37	0	37	multi-exon	FALSE	canonical	3	68	junction_8	10.6880482315528	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGGTCAGTTGTCATT	NA	False	NA	NA	False	AATATA	-14	NA	18609313	18629829	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_18609446_18613442_18613507_18616881_18616973_18617249_18617299_18618487_18618636_18618766_18618839_18619537_18619645_18622418_18622503_18628599
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086589	chr19	+	1719	2	FSM	ENSMUSG00000047044.8	ENSMUST00000062753.3	1677	2	-35	-7	-35	7	multi-exon	FALSE	canonical	3	347	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAGTGACTAATTTTGTA	9279	False	NA	33	True	AATAAA	-26	NA	18690521	18695799	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_18691024_18694582
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086597	chr19	+	1696	2	FSM	ENSMUSG00000047044.8	ENSMUST00000055792.8	1631	2	-64	-1	-21	1	multi-exon	FALSE	canonical	3	77	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATGTATCAGTGACTAAT	9293	False	NA	27	True	AATAAA	-20	NA	18690535	18695793	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_18691024_18694585
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086609	chr19	-	205	1	Intergenic	novelGene_2644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAATTTAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	19115142	19114937	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_19114900_19115100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086616	chr19	-	176	1	Intergenic	novelGene_2645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAAGACTCTTTT	NA	False	NA	NA	False	NA	NA	NA	20184496	20184320	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_20184300_20184500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086638	chr19	+	2951	5	NIC	ENSMUSG00000024750.12	novel	7385	6	NA	NA	11	-265	intron_retention	FALSE	canonical	3	349	junction_1	13.0096118312577	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTTCTTGTTTATTGGG	NA	False	NA	16	True	AATAAA	-16	NA	21249652	21259389	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_+_21250107_21253789_21254454_21255018_21255123_21256988_21257115_21257786
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086642	chr19	+	226	1	Intergenic	novelGene_2646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAAAGTTCTCCAGAAGC	NA	False	NA	NA	False	NA	NA	NA	21417469	21417695	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_21417500_21417700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086646	chr19	+	185	1	Intergenic	novelGene_2647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGAAGACGAGGAGGAAGA	NA	False	NA	NA	False	NA	NA	NA	21505519	21505704	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_21505500_21505700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086649	chr19	+	183	1	Intergenic	novelGene_2648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGATATTTATTTACCT	NA	False	NA	NA	False	NA	NA	NA	21572574	21572757	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_21572600_21572800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086674	chr19	+	6580	24	FSM	ENSMUSG00000024754.14	ENSMUST00000025663.8	6602	24	-11	33	3	0	multi-exon	FALSE	canonical	3	56	junction_1	16.2129029807244	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTGTATTTGTGAATC	NA	False	NA	20	True	AATAAA	-26	NA	21755710	21835691	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_21756151_21770001_21770345_21774690_21774832_21775230_21775793_21779225_21779396_21784722_21784912_21786632_21786803_21789130_21789341_21789574_21789781_21789914_21789985_21792794_21792924_21795286_21795376_21801151_21801284_21802453_21802490_21803403_21803560_21807163_21807342_21809390_21809607_21812781_21812991_21819404_21819588_21821983_21822204_21825300_21825400_21829588_21829744_21833022_21833127_21833518
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086682	chr19	+	5256	2	Intergenic	novelGene_2649	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	3428	junction_1	0	2249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAACCACAACTCAAGGA	1173	False	NA	NA	False	NA	NA	NA	22699831	22705301	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_22700550_22700763
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086688	chr19	+	5183	3	Intergenic	novelGene_2650	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1714	326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAGCTGAGTAAAGGGGT	1175	False	NA	NA	False	NA	NA	NA	22699833	22705271	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_22700550_22700763_22704734_22704774
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086708	chr19	-	5433	1	Intergenic	novelGene_2651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	22705268	22699835	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_22699800_22705300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086717	chr19	-	174	1	Intergenic	novelGene_2652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAGAAAGGTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	22974428	22974254	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_22974300_22974400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086725	chr19	+	179	1	Intergenic	novelGene_2653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGGGGAAAAATAACAAGCA	2476	False	NA	10	True	NA	NA	NA	23093417	23093596	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_23093400_23093600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086733	chr19	+	3547	2	Fusion	ENSMUSG00000044387.6_ENSMUSG00000033863.3	novel	414	2	NA	NA	-45	-5	multi-exon	FALSE	canonical	3	42	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCCAGCCATTACGTTC	NA	False	NA	NA	False	AATAAA	-24	NA	23112218	23145493	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr19_+_23112319_23142046
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086759	chr19	-	5740	24	FSM	ENSMUSG00000024943.10	ENSMUST00000223934.2	3448	24	-22	-2270	-22	-2	multi-exon	FALSE	canonical	2	185	junction_5	71.1727842464471	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTTATTTAAGATGAGAG	NA	False	NA	-13	True	AATAAA	-21	NA	23251283	23183816	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086764	chr19	-	5741	25	FSM	ENSMUSG00000024943.10	ENSMUST00000087556.7	5683	25	-60	2	19	-2	multi-exon	FALSE	canonical	2	93	junction_7	95.2415696910872	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTTATTTAAGATGAGAG	NA	False	NA	-13	True	AATAAA	-21	NA	23251242	23183816	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23192518_23192564_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086786	chr19	+	173	1	Intergenic	novelGene_2654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGTGCTGTGCTGAATG	NA	False	NA	NA	False	NA	NA	NA	23240434	23240607	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_23240400_23240600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086791	chr19	+	920	1	FSM	ENSMUSG00000051255.7	ENSMUST00000056396.7	633	1	-27	-260	-27	260	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAAACAGCGGAT	NA	False	NA	NA	False	NA	NA	NA	23653184	23654104	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_23653200_23654100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086808	chr19	-	4640	23	FSM	ENSMUSG00000024812.12	ENSMUST00000099558.5	4591	23	-22	-27	-18	9	multi-exon	FALSE	canonical	0	0	junction_22	84.2977309185516	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTATGAATGTTTTTC	NA	False	NA	NA	False	ATTAAA	-25	NA	24202412	24071859	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24202214
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086811	chr19	-	4810	24	NIC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	-67	9	combination_of_known_junctions	TRUE	canonical	0	0	junction_23	82.6461699898347	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTATGAATGTTTTTC	NA	False	NA	NA	False	ATTAAA	-25	NA	24202461	24071859	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086828	chr19	-	2659	5	FSM	ENSMUSG00000059363.11	ENSMUST00000081333.11	1114	5	10	-1555	10	1555	multi-exon	FALSE	canonical	3	359	junction_4	29.2018835008977	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGGGTGTCCCTTTGTCT	NA	False	NA	NA	False	AATAAA	-22	NA	24257959	24237261	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_24239418_24244665_24244764_24249710_24249832_24254544_24254640_24257770
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086835	chr19	-	2965	15	FSM	ENSMUSG00000024867.15	ENSMUST00000025800.15	2573	15	-392	0	-392	0	multi-exon	FALSE	canonical	3	28	junction_9	5.473498303048	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGTCATACATTGATTC	NA	False	NA	0	True	AATAAA	-16	NA	24533628	24272157	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_24272919_24281395_24281511_24323600_24323746_24327497_24327654_24332481_24332567_24335393_24335443_24335574_24335659_24337303_24337516_24356165_24356466_24359051_24359205_24367707_24367826_24374379_24374511_24416416_24416486_24420965_24421053_24533128
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086846	chr19	-	315	1	Intergenic	novelGene_2655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACACATTCCACGTGAAC	1439	False	NA	NA	False	NA	NA	NA	24517302	24516987	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_24517000_24517300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086857	chr19	-	1424	15	FSM	ENSMUSG00000024878.10	ENSMUST00000025815.10	1929	15	-4	509	-4	-509	multi-exon	FALSE	canonical	3	171	junction_14	17.2858618647773	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTCTGGAGGTTTTTTT	NA	False	NA	-30	True	AGTAAA	-34	NA	24938969	24897788	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24909027_24909085_24915759_24915805_24918112_24918200_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086863	chr19	-	187	1	Intergenic	novelGene_2656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGTATTAAAAAAATGAAAT	NA	False	NA	NA	False	NA	NA	NA	24921209	24921022	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_24921000_24921200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086868	chr19	+	471	1	Intergenic	novelGene_2657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTGAAAATCCCATGTAAA	5836	False	NA	NA	False	AATAAA	-37	NA	25010494	25010965	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_25010500_25011000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086878	chr19	+	201	1	Intergenic	novelGene_2658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGGCCAGTGAAGTGGC	4973	False	NA	NA	False	NA	NA	NA	25102856	25103057	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_25102900_25103100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086888	chr19	+	212	1	Intergenic	novelGene_2659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGCTAAAGTAATTTGAG	5603	False	NA	NA	False	NA	NA	NA	25188006	25188218	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_25188000_25188200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086901	chr19	+	5638	14	FSM	ENSMUSG00000032702.17	ENSMUST00000049400.15	5637	14	0	-1	0	1	multi-exon	FALSE	canonical	3	26	junction_1	16.8104644783043	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTGCCCCTGCTTCAT	NA	False	NA	7	True	AATAAA	-16	NA	25214338	25411861	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_25214682_25252111_25252199_25295668_25295797_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086906	chr19	+	172	1	Intergenic	novelGene_2660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACACACACACACACACATA	NA	False	NA	NA	False	NA	NA	NA	25472705	25472877	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_25472700_25472900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086910	chr19	+	2332	5	FSM	ENSMUSG00000024837.16	ENSMUST00000025755.11	2340	5	8	0	8	0	multi-exon	FALSE	canonical	3	122	junction_3	4.08503365959205	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGTGTGTATATTTG	NA	False	NA	12	True	AATAAA	-20	NA	25482989	25581693	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_25483566_25487043_25487228_25523182_25523467_25537230_25537376_25580550
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086931	chr19	-	3512	18	FSM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	-44	3	-44	-3	multi-exon	TRUE	canonical	3	1256	junction_17	93.320929312512	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTATTTGTTTGTTTGT	NA	False	NA	-3	True	NA	NA	NA	27407269	27366100	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086935	chr19	-	2114	18	NNC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	-1	8	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_11	358.775078696146	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGGTTTAATGTCAACT	NA	False	NA	-9	True	TATAAA	-18	NA	27407226	27367452	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398869_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086938	chr19	-	2508	18	NNC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	27	8	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_17	358.726852935909	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGGTTTAATGTCAACT	NA	False	NA	-9	True	TATAAA	-18	NA	27407193	27367452	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27406767
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086948	chr19	+	177	1	Intergenic	novelGene_2661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAGAGTTCATTAA	NA	False	NA	NA	False	NA	NA	NA	28311476	28311653	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_28311500_28311700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086952	chr19	+	186	1	Intergenic	novelGene_2662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTGTTAAATACAATCG	NA	False	NA	NA	False	NA	NA	NA	28467620	28467806	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_28467600_28467800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086954	chr19	+	184	1	Intergenic	novelGene_2663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGTAGCTCATTAAA	NA	False	NA	3	True	NA	NA	NA	28638107	28638291	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_28638100_28638300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086967	chr19	+	193	1	Intergenic	novelGene_2664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCGCAGTACTCGAAGGA	NA	False	NA	NA	False	NA	NA	NA	28750447	28750640	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_28750400_28750600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086974	chr19	+	3746	12	FSM	ENSMUSG00000024935.12	ENSMUST00000025875.5	3800	12	54	0	-7	0	multi-exon	FALSE	canonical	3	74	junction_8	5.75246982529323	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGCCTCTCATCTGT	NA	False	NA	17	True	AATAAA	-27	NA	28812527	28891360	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_28812733_28856412_28856554_28870234_28870328_28871853_28871969_28873483_28873527_28874906_28875003_28878841_28879027_28880085_28880194_28882011_28882135_28882732_28882928_28886830_28886966_28889053
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086983	chr19	+	175	1	Intergenic	novelGene_2665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCCAGAGAGAGAAGAAAAG	5104	False	NA	NA	False	NA	NA	NA	28898145	28898320	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_28898100_28898300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000086984	chr19	-	199	1	Intergenic	novelGene_2666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAGTAAATTGAGAA	NA	False	NA	NA	False	NA	NA	NA	28899869	28899670	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_28899700_28899900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087021	chr19	+	179	1	Intergenic	novelGene_2667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTAAAGAACAC	6669	False	NA	NA	False	NA	NA	NA	29318925	29319104	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_29318900_29319100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087046	chr19	+	170	1	Intergenic	novelGene_2668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAATTGCAAAGCACATT	NA	False	NA	NA	False	NA	NA	NA	29651263	29651433	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_29651300_29651400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087053	chr19	-	206	1	Intergenic	novelGene_2669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGTGGACCAGCCAGA	NA	False	NA	NA	False	NA	NA	NA	29655121	29654915	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_29654900_29655100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087061	chr19	+	460	3	ISM	ENSMUSG00000024806.5	ENSMUST00000235954.2	739	5	6713	-23	6713	23	3prime_fragment	FALSE	canonical	3	41	junction_1	3.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTGGGCAGTAATGCA	NA	False	NA	27	True	AATAAA	-18	NA	29682046	29685849	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr19_+_29682117_29684207_29684322_29685573
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087068	chr19	-	4568	1	FSM	ENSMUSG00000074909.6	ENSMUST00000099525.5	4575	1	7	0	7	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTCCTTCTACTGTGTT	NA	False	NA	-1	True	AATAAA	-21	NA	29790367	29785799	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_29785800_29790400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087076	chr19	+	3631	16	FSM	ENSMUSG00000024817.14	ENSMUST00000025739.14	3536	16	-88	-7	-88	7	multi-exon	FALSE	canonical	3	216	junction_4	27.709124048868	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCATCCAGCTTTACTTATT	3997	False	NA	32	True	AATAAA	-22	NA	30007824	30071129	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_30008332_30016463_30016698_30033634_30033895_30048642_30048862_30051293_30051404_30052483_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087097	chr19	-	3822	25	FSM	ENSMUSG00000024827.11	ENSMUST00000025778.9	3767	25	-49	-6	-49	6	multi-exon	FALSE	canonical	1	455	junction_4	183.478351735445	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCCATTTGATTTTACAC	NA	False	NA	-1	True	AATAAA	-22	NA	30152878	30075840	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087105	chr19	-	3771	25	NNC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	264.996380347397	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGAATTTCCCATTTGATT	NA	False	NA	-7	True	AATAAA	-16	NA	30152829	30075846	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088068_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087117	chr19	+	190	1	Intergenic	novelGene_2670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGATTGTGATG	NA	False	NA	NA	False	NA	NA	NA	30155997	30156187	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_30156000_30156200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087129	chr19	+	3619	1	FSM	ENSMUSG00000053536.8	ENSMUST00000066039.8	4233	1	141	473	141	-473	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATGTTTCATTTTAT	NA	False	NA	19	True	AATAAA	-21	NA	31060377	31063996	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_31060400_31064000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087138	chr19	+	192	1	Intergenic	novelGene_2671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCTCACAATCACCTATA	NA	False	NA	NA	False	NA	NA	NA	31219420	31219612	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_31219400_31219600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087146	chr19	-	3372	7	NNC	ENSMUSG00000040451.19	novel	3665	10	NA	NA	-3449	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_6	60.6538447988987	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCTATTATATTGTGTT	4127	False	NA	-1	True	AATAAA	-18	NA	32219675	32100126	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32219462
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087151	chr19	-	3252	6	FSM	ENSMUSG00000040451.19	ENSMUST00000151289.9	3262	6	11	-1	11	0	multi-exon	FALSE	canonical	3	81	junction_5	43.4069118920017	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCTATTATATTGTGTT	8030	False	NA	-1	True	AATAAA	-18	NA	32188402	32100126	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32188227
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087167	chr19	+	255	1	Intergenic	novelGene_2672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAACCTCCCTGGCAAAAT	NA	False	NA	NA	False	NA	NA	NA	32287110	32287365	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_32287100_32287400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087192	chr19	-	194	1	Intergenic	novelGene_2673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCAGAGAAGAGGCAGGCA	5096	False	NA	NA	False	NA	NA	NA	32677749	32677555	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_32677600_32677700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087198	chr19	+	201	1	Intergenic	novelGene_2674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGCTGTTGGCAAGGCA	NA	False	NA	NA	False	NA	NA	NA	32683681	32683882	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_32683700_32683900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087204	chr19	+	193	1	Intergenic	novelGene_2675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGAAGAAGGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	32699517	32699710	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_32699500_32699700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087213	chr19	-	191	1	Intergenic	novelGene_2676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACCAAAAAAAAGAGTGCA	NA	False	NA	NA	False	NA	NA	NA	32713812	32713621	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_32713600_32713800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087230	chr19	+	168	1	Intergenic	novelGene_2677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAGAATTCTGA	NA	False	NA	NA	False	NA	NA	NA	32845465	32845633	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_32845500_32845600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087231	chr19	-	216	2	Intergenic	novelGene_2678	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCACCATCAGAATTCTGT	NA	False	NA	NA	False	NA	NA	NA	32851097	32845465	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_32845650_32851065
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087236	chr19	-	1620	7	FSM	ENSMUSG00000071573.15	ENSMUST00000096114.13	1597	7	-20	-3	10	3	multi-exon	FALSE	canonical	2	11	junction_4	3.8151743807532	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTTTTATAGCCTCACA	NA	False	NA	NA	False	AATAAA	-18	NA	33369685	33115143	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_33115675_33145721_33145898_33179874_33180049_33359766_33359926_33367316_33367460_33368479_33368586_33369354
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087246	chr19	-	2743	11	FSM	ENSMUSG00000024766.16	ENSMUST00000112508.9	2839	11	93	3	93	0	multi-exon	FALSE	canonical	3	39	junction_5	12.3109707172099	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTTTCTGTTTCTTAAA	NA	False	NA	-4	True	NA	NA	NA	33567615	33532562	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_33533880_33534506_33534579_33535664_33535737_33536911_33537056_33556761_33556899_33557864_33557975_33559452_33559652_33560446_33560565_33562269_33562376_33565600_33565744_33567290
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087255	chr19	+	194	1	Intergenic	novelGene_2679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGATGTTGGATCACAGCA	NA	False	NA	NA	False	NA	NA	NA	33591945	33592139	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_33591900_33592100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087294	chr19	+	182	1	Intergenic	novelGene_2680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAAAAAGTAGAAA	NA	False	NA	NA	False	NA	NA	NA	34863971	34864153	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_34864000_34864200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087300	chr19	+	5360	31	NIC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	-3	5	combination_of_known_junctions	FALSE	canonical	3	103	junction_1	66.7043226985078	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCTCTTAAACTTTTTC	NA	False	NA	18	True	AATAAA	-29	NA	34899757	34953150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34950258_34950410_34951827_34951971_34952892
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087333	chr19	+	1162	11	FSM	ENSMUSG00000024800.9	ENSMUST00000025714.9	1145	11	-21	4	-6	-4	multi-exon	FALSE	canonical	3	930	junction_4	72.6416547168359	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGGATTTTTAAATTTT	NA	False	NA	NA	False	AATAAA	-22	NA	36061109	36082173	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071866_36077571_36077689_36078208_36078239_36078633_36078672_36079220_36079301_36081735
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087347	chr19	+	1587	9	FSM	ENSMUSG00000024805.17	ENSMUST00000062389.6	1566	9	-5	-16	-5	4	multi-exon	FALSE	canonical	3	71	junction_8	19.6580136331217	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGCTTATTCTTGAGTG	NA	False	NA	10	True	AATAAA	-22	NA	36387142	36433608	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_36387310_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36433020
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087360	chr19	+	213	1	Intergenic	novelGene_2681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTTATGATATACATATG	NA	False	NA	NA	False	NA	NA	NA	36446781	36446994	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_36446800_36447000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087368	chr19	+	4748	21	FSM	ENSMUSG00000041180.14	ENSMUST00000169036.9	3842	21	-19	-887	10	-3	multi-exon	FALSE	canonical	3	14	junction_10	5.91840350094516	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGCTTCAGTTCATTTT	NA	False	NA	6	True	ATTAAA	-13	NA	36532048	36598529	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_36532316_36546772_36546903_36561335_36561475_36562295_36562399_36562843_36562934_36564765_36564831_36572608_36572655_36574476_36574587_36576286_36576436_36576995_36577120_36578828_36578929_36581649_36581758_36582567_36582701_36583785_36583875_36586664_36586824_36588763_36588839_36589543_36589632_36589716_36589824_36591747_36591864_36592899_36593044_36596123
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087375	chr19	+	199	1	Intergenic	novelGene_2682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTCAATCTGATCAGCA	NA	False	NA	NA	False	NA	NA	NA	36780345	36780544	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_36780300_36780500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087395	chr19	+	6506	27	FSM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	-29	4	-29	-4	multi-exon	FALSE	canonical	3	663	junction_17	101.711420291683	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATAGTTCTCTTGATTGT	NA	False	NA	12	True	AATAAA	-18	NA	36811602	36870873	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087412	chr19	+	191	1	Intergenic	novelGene_2683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCACAGGCTATTTTGGA	1400	False	NA	NA	False	NA	NA	NA	36892202	36892393	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_36892200_36892400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087431	chr19	+	203	1	Intergenic	novelGene_2684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTTCAAGGTGTCCCAT	NA	False	NA	NA	False	NA	NA	NA	36975714	36975917	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_36975700_36975900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087462	chr19	-	5140	25	FSM	ENSMUSG00000056999.17	ENSMUST00000131070.3	5059	25	-79	-2	-79	2	multi-exon	TRUE	canonical	3	707	junction_13	63.1947496940125	281	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCTTTGTGTTGTGTGAC	NA	False	NA	0	True	AATAAA	-20	NA	37340089	37246139	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087484	chr19	-	183	1	Intergenic	novelGene_2685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAATCCCCCAATATGG	5855	False	NA	-1	True	NA	NA	NA	37347782	37347599	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_37347600_37347800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087495	chr19	+	4889	22	FSM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	-62	-8	-62	8	multi-exon	TRUE	canonical	3	280	junction_17	34.0452546631592	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTGTACATTTGTGCGC	NA	False	NA	16	True	ATTAAA	-23	NA	37364788	37410315	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348_37406466_37408706
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087506	chr19	+	191	1	Intergenic	novelGene_2686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGCCTTGCCTGGTGTGG	NA	False	NA	NA	False	NA	NA	NA	37451365	37451556	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_37451400_37451600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087580	chr19	+	2647	10	NIC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	-20	1	combination_of_known_junctions	FALSE	canonical	3	35	junction_2	120.180419924933	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTAGTATGTGTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	38043516	38062872	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_+_38043766_38045857_38045929_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087581	chr19	+	2619	10	NNC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	-20	1	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_2	109.160432391962	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTAGTATGTGTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	38043516	38062872	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr19_+_38043766_38045857_38045901_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087599	chr19	-	1428	14	FSM	ENSMUSG00000054237.7	ENSMUST00000067167.6	1402	14	-22	-4	-4	4	multi-exon	TRUE	canonical	3	295	junction_2	36.3583414649629	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGAGTCTTTCCTTTCA	NA	False	NA	-3	True	AATAAA	-24	NA	38212608	38176924	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_38177249_38178276_38178356_38184144_38184184_38188007_38188127_38189994_38190038_38193143_38193258_38195710_38195757_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284_38210362_38212409
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087611	chr19	+	187	1	Intergenic	novelGene_2687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTAGCCCTTCCTCTTT	NA	False	NA	NA	False	NA	NA	NA	38327460	38327647	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_38327500_38327600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087620	chr19	+	3489	2	NIC	ENSMUSG00000044026.4	novel	3474	3	NA	NA	-196	0	combination_of_known_splicesites	FALSE	canonical	3	41	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGTCTCACGACTCGT	NA	False	NA	35	True	AATAAA	-36	NA	38384231	38394058	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_+_38384750_38391087
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087639	chr19	-	3986	21	FSM	ENSMUSG00000024999.8	ENSMUST00000025963.8	3977	21	-2	-7	-2	7	multi-exon	FALSE	canonical	3	233	junction_1	18.6711006638602	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTACGAGGTTTTGTTTG	2286	False	NA	NA	False	AATAAA	-24	NA	38807683	38776564	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783415_38783598_38783929_38784002_38784081_38784146_38784240_38784314_38787341_38787443_38787753_38787835_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38800787_38800919_38802524_38802579_38803129_38803288_38804026_38804160_38806381_38806590_38807536
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087654	chr19	+	186	1	Intergenic	novelGene_2688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGAAGCTAATTTGAG	NA	False	NA	NA	False	NA	NA	NA	38911638	38911824	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_38911600_38911800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087659	chr19	+	6285	22	FSM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	0	-417	0	417	multi-exon	TRUE	canonical	3	1554	junction_5	143.18806117019	1271	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGTATATTGTCAATTG	NA	False	NA	17	True	AATAAA	-20	NA	38919358	38959912	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087684	chr19	+	197	1	Intergenic	novelGene_2689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATTTGAGAGTAAAATG	1597	False	NA	NA	False	NA	NA	NA	38951864	38952061	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_38951900_38952100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087698	chr19	-	1450	7	FSM	ENSMUSG00000055044.13	ENSMUST00000068439.13	2571	7	55	1066	55	124	multi-exon	FALSE	canonical	3	193	junction_3	18.3938395484285	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGACCTCTTAGTTGAC	NA	False	NA	-18	True	AATAAA	-18	NA	40260005	40210682	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_40211216_40211494_40211613_40218950_40219103_40231849_40232044_40238062_40238148_40240353_40240506_40259789
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087713	chr19	-	3476	19	FSM	ENSMUSG00000025007.14	ENSMUST00000176939.8	3427	19	-41	-8	0	8	multi-exon	FALSE	canonical	3	185	junction_12	241.939820085925	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCGTTTTCTCCCTTATTT	NA	False	NA	-3	True	AATAAA	-26	NA	40576854	40538692	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562660_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087733	chr19	-	3386	18	NIC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_17	265.434357090177	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACAGTTCGTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	40576832	40538700	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40576753
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087747	chr19	-	2475	1	FSM	ENSMUSG00000096592.2	ENSMUST00000120920.2	522	1	-697	-1256	-697	1256	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTCGTCACTGAGGACAC	NA	False	NA	NA	False	AATAAA	-10	NA	40550199	40547724	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_40547700_40550200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087756	chr19	-	2753	14	FSM	ENSMUSG00000025008.16	ENSMUST00000025981.15	2743	14	-11	1	-11	-1	multi-exon	FALSE	canonical	3	33	junction_10	4.39337855732112	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTGACTTTTTTTCTT	NA	False	NA	-2	True	CATAAA	-16	NA	40600688	40584890	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_40585987_40591248_40591387_40593749_40593904_40594146_40594242_40594669_40594778_40595721_40595848_40596069_40596151_40596663_40596700_40597135_40597252_40597345_40597455_40597645_40597777_40599737_40599857_40600094_40600219_40600368
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087768	chr19	+	6936	5	NNC	ENSMUSG00000049164.8	novel	6568	3	NA	NA	-546	-1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	40.2453413453036	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGAGTTTCTTCTTTTT	NA	False	NA	40	True	ATTAAA	-17	NA	40882602	40906386	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr19_+_40882790_40885527_40885610_40896502_40896648_40899476_40899554_40899941
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087779	chr19	+	6815	5	FSM	ENSMUSG00000049164.8	ENSMUST00000050092.7	6840	5	20	5	20	-1	multi-exon	FALSE	canonical	3	75	junction_1	19.3196790863617	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGAGTTTCTTCTTTTT	NA	False	NA	40	True	ATTAAA	-17	NA	40883168	40906386	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_40883235_40885527_40885610_40896502_40896648_40899476_40899554_40899941
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087787	chr19	-	188	1	Intergenic	novelGene_2690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATCTGTGAACAACTTTC	NA	False	NA	NA	False	NA	NA	NA	40913727	40913539	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_40913500_40913700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087798	chr19	+	194	1	Intergenic	novelGene_2691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCCGCAAGCATTACTAT	2585	False	NA	NA	False	NA	NA	NA	40942806	40943000	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_40942800_40943000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087801	chr19	-	6216	15	FSM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	-96	-2950	-79	2	multi-exon	TRUE	canonical	3	1017	junction_13	71.1689926176006	378	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGCTTTCTTTCCTTTG	NA	False	NA	1	True	AATAAA	-22	NA	41252515	41199280	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087829	chr19	-	5124	12	FSM	ENSMUSG00000025154.16	ENSMUST00000026150.15	5103	12	-20	-1	-20	1	multi-exon	FALSE	canonical	3	296	junction_2	42.9826026693522	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGGTTCTGACTGGTCT	4507	False	NA	NA	False	ATTAAA	-18	NA	41790506	41755025	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087840	chr19	-	5065	12	FSM	ENSMUSG00000025154.16	ENSMUST00000177495.2	1652	12	-7	-3406	-7	0	multi-exon	FALSE	canonical	3	21	junction_5	104.114844409653	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGGTTCTGACTGGTC	4520	False	NA	NA	False	ATTAAA	-17	NA	41790493	41755026	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769744_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087855	chr19	+	180	1	Intergenic	novelGene_2692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCCAAAGCGGAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	41785639	41785819	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_41785600_41785800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087857	chr19	-	2146	1	FSM	ENSMUSG00000047604.4	ENSMUST00000059231.4	2161	1	15	0	15	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTTTGTTTTTGTTTGG	NA	False	NA	NA	False	AATAAA	-23	NA	41836556	41834410	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_41834400_41836600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087871	chr19	-	5221	34	FSM	ENSMUSG00000035049.5	ENSMUST00000038677.5	4340	34	-29	-852	-29	852	multi-exon	TRUE	canonical	3	269	junction_16	39.9184430265499	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACAACATACATGTTCTTA	NA	False	NA	-27	True	NA	NA	NA	41884641	41850437	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087875	chr19	+	202	1	Intergenic	novelGene_2693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAGCTGGGCAGTGGTGG	9857	False	NA	NA	False	NA	NA	NA	41858652	41858854	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_41858700_41858900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087897	chr19	-	2256	8	FSM	ENSMUSG00000034321.15	ENSMUST00000075280.12	1018	8	-18	-1220	-16	-54	multi-exon	FALSE	canonical	3	822	junction_7	62.4257926808842	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTCTGTGCCACAGCACG	NA	False	NA	NA	False	ATTAAA	-19	NA	41921753	41910784	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921487_41921604_41921690
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087921	chr19	+	1875	12	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	79	junction_8	134.380796050282	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTAGCTTCTCTGTGCCT	4131	False	NA	16	True	AATAAA	-22	NA	41921920	41932541	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41928295_41928344_41929088_41929175_41929954_41930079_41930374_41930446_41932020
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087937	chr19	-	3478	31	FSM	ENSMUSG00000025159.9	ENSMUST00000171561.8	6607	31	16	3113	-2	6	multi-exon	FALSE	canonical	3	95	junction_15	35.2197703317643	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACGTGTACTGCCTTATT	NA	False	NA	-2	True	AATAAA	-22	NA	41969580	41932637	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942457_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087940	chr19	-	3481	31	NIC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	-8	6	combination_of_known_junctions	FALSE	canonical	3	137	junction_15	29.8713723971445	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACGTGTACTGCCTTATT	NA	False	NA	-2	True	AATAAA	-22	NA	41969586	41932637	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087956	chr19	+	1786	3	FSM	ENSMUSG00000025171.3	ENSMUST00000026170.3	1529	3	-250	-7	-250	7	multi-exon	FALSE	canonical	3	94	junction_1	5.5	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATGACTTCCTGTTTCA	NA	False	NA	17	True	AATAAA	-23	NA	41969951	42023089	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_41970448_42020327_42020556_42022027
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087963	chr19	+	191	1	Intergenic	novelGene_2694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGTGCGGTGGCGCACA	5047	False	NA	NA	False	NA	NA	NA	41986839	41987030	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_41986800_41987000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087971	chr19	-	1814	5	FSM	ENSMUSG00000049670.10	ENSMUST00000051772.10	1800	5	-11	-3	-11	0	multi-exon	FALSE	canonical	2	63	junction_4	19.0574788468989	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTATGAACTTTCTG	4129	False	NA	0	True	AATAAA	-24	NA	42074807	42063377	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_42064695_42064893_42065004_42066403_42066519_42066922_42067023_42074635
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000087993	chr19	+	189	1	Intergenic	novelGene_2695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGTGAGAACTAGGATGT	1576	False	NA	NA	False	NA	NA	NA	42070288	42070477	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_42070300_42070500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088005	chr19	+	262	1	Intergenic	novelGene_2696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAATAACAACAGTTCCCC	4600	False	NA	NA	False	NA	NA	NA	42073312	42073574	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_42073300_42073600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088028	chr19	-	1054	3	FSM	ENSMUSG00000018821.4	ENSMUST00000018965.4	1044	3	-8	-2	-8	2	multi-exon	FALSE	canonical	3	851	junction_1	12	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCAGAGTGTGCTACAG	NA	False	NA	-3	True	AATAAA	-17	NA	42117506	42111709	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_42112288_42113186_42113466_42117309
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088055	chr19	+	198	1	Intergenic	novelGene_2697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGTTTTTTTG	3526	False	NA	NA	False	NA	NA	NA	42150994	42151192	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_42151000_42151200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088065	chr19	+	2579	12	FSM	ENSMUSG00000018820.14	ENSMUST00000099443.11	2573	12	-5	-1	-5	1	multi-exon	FALSE	canonical	3	55	junction_1	33.3877792261314	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTGTCAGGTCTCCTA	NA	False	NA	8	True	AATAAA	-15	NA	42159027	42180157	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_42159108_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177635_42177683_42177960_42178043_42178821
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088080	chr19	-	2123	15	FSM	ENSMUSG00000042401.9	ENSMUST00000048630.8	2618	15	-2	497	0	0	multi-exon	FALSE	canonical	3	19	junction_14	18.8128538342208	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTTTGTGGAAAACTAT	NA	False	NA	-17	True	AATAAA	-17	NA	42420224	42271970	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_42272120_42272561_42272706_42275611_42275655_42276291_42276438_42286092_42286262_42286721_42286823_42287595_42287679_42290563_42290701_42293108_42293255_42297495_42297631_42307043_42307201_42312150_42312288_42322314_42322512_42402379_42402583_42420048
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088087	chr19	+	181	1	Intergenic	novelGene_2698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGGAACAAGCAGGGACTGA	8562	False	NA	NA	False	NA	NA	NA	42277252	42277433	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_42277300_42277400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088093	chr19	+	211	1	Intergenic	novelGene_2699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAAACTTTTTTTTTTCC	NA	False	NA	NA	False	NA	NA	NA	42390430	42390641	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_42390400_42390600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088108	chr19	-	2044	9	FSM	ENSMUSG00000025190.14	ENSMUST00000026196.14	2058	9	14	0	14	0	multi-exon	FALSE	canonical	3	761	junction_5	49.6934351801121	580	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTTTGTGATCCATTCA	8331	False	NA	-3	True	NA	NA	NA	43513030	43488190	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_43488997_43491346_43491490_43492960_43493127_43493214_43493366_43495360_43495466_43495760_43495874_43496308_43496433_43504119_43504302_43512776
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088116	chr19	-	1562	4	FSM	ENSMUSG00000040414.9	ENSMUST00000046038.9	1535	4	-27	0	-27	0	multi-exon	FALSE	canonical	3	130	junction_2	77.3146529162199	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGTGTTGGGTTTGTCTT	NA	False	NA	-3	True	ATTAAA	-19	NA	43663347	43652239	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_43653083_43654210_43654268_43655353_43655583_43662914
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088120	chr19	-	2657	3	NIC	ENSMUSG00000040414.9	novel	1535	4	NA	NA	-36	0	intron_retention	FALSE	canonical	3	293	junction_1	1	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGTGTTGGGTTTGTCTT	NA	False	NA	-3	True	ATTAAA	-19	NA	43663356	43652239	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_-_43653083_43654210_43655583_43662914
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088138	chr19	-	3738	2	FSM	ENSMUSG00000040414.9	ENSMUST00000235953.2	3724	2	-10	-4	-10	0	multi-exon	FALSE	canonical	3	295	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGTGTTGGGTTTGTCTT	NA	False	NA	-3	True	ATTAAA	-19	NA	43663309	43652239	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_43655583_43662914
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088176	chr19	-	183	1	Intergenic	novelGene_2700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAGAGTATAGTT	NA	False	NA	NA	False	NA	NA	NA	43895667	43895484	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_43895500_43895700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088179	chr19	+	190	1	Intergenic	novelGene_2701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGAGAGATGTTTCAGA	NA	False	NA	NA	False	NA	NA	NA	43932301	43932491	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_43932300_43932500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088190	chr19	-	3134	12	FSM	ENSMUSG00000025198.17	ENSMUST00000112028.10	3136	12	3	-1	3	1	multi-exon	TRUE	canonical	3	111	junction_11	27.8217466521579	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTGTTCTATTTTCT	NA	False	NA	-1	True	AATAAA	-20	NA	44058221	44023381	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044635_44047489_44047616_44050281_44050344_44051457_44051505_44056038_44056121_44057710_44057835_44058129
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088191	chr19	-	3236	12	FSM	ENSMUSG00000025198.17	ENSMUST00000071698.13	3228	12	-7	-1	3	1	multi-exon	FALSE	canonical	3	64	junction_11	39.5783562189201	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTGTTCTATTTTCT	NA	False	NA	-1	True	AATAAA	-20	NA	44058221	44023381	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044635_44047489_44047616_44050281_44050344_44051457_44051505_44056038_44056121_44057710_44057835_44058027
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088213	chr19	-	3508	21	FSM	ENSMUSG00000025199.17	ENSMUST00000026217.11	3502	21	-6	0	-6	0	multi-exon	FALSE	canonical	3	185	junction_2	31.5901883501824	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAATCTCTACTCATTT	NA	False	NA	-1	True	ATTAAA	-15	NA	44095925	44061773	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_44062980_44063869_44063970_44065684_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088219	chr19	-	3482	21	FSM	ENSMUSG00000025199.17	ENSMUST00000119591.2	3481	21	0	-1	0	0	multi-exon	FALSE	canonical	3	113	junction_2	45.2515193115104	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAATCTCTACTCATTT	NA	False	NA	-1	True	ATTAAA	-15	NA	44095916	44061773	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_44062980_44063869_44063970_44065701_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088238	chr19	-	2788	14	FSM	ENSMUSG00000025200.8	ENSMUST00000026218.7	3581	14	16	777	1	2	multi-exon	FALSE	canonical	3	133	junction_12	11.4813973542901	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTTTCCACCTGGCCTC	NA	False	NA	-1	True	AATAAA	-22	NA	44124299	44097852	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120524_44120604_44121438_44121524_44124204
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088250	chr19	-	248	1	FSM	ENSMUSG00000077391.3	ENSMUST00000104203.3	146	1	2	-104	2	104	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACTTCATCAAGACTTCAA	4908	False	NA	-5	True	NA	NA	NA	44102561	44102313	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_44102300_44102600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088252	chr19	-	895	5	FSM	ENSMUSG00000057506.6	ENSMUST00000079033.6	885	5	3	-13	0	0	multi-exon	FALSE	canonical	3	1199	junction_4	51.0165414351071	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTTTGGTTTTTG	966	False	NA	NA	False	ATTAAA	-18	NA	44134882	44127684	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_44128153_44130562_44130668_44131459_44131580_44134379_44134497_44134797
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088259	chr19	-	1669	4	NIC	ENSMUSG00000057506.6	novel	885	5	NA	NA	5	0	intron_retention	FALSE	canonical	3	1199	junction_3	40.0860186210715	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTTTGGTTTTTG	984	False	NA	NA	False	ATTAAA	-18	NA	44134864	44127684	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_-_44128153_44130562_44131580_44134379_44134497_44134797
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088281	chr19	-	192	1	Intergenic	novelGene_2702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAGAAACAGATATGATGC	NA	False	NA	NA	False	NA	NA	NA	44200110	44199918	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_44199900_44200100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088297	chr19	+	5083	6	FSM	ENSMUSG00000025203.7	ENSMUST00000026221.7	5455	6	372	0	-30	0	multi-exon	FALSE	canonical	3	2597	junction_1	100.817458805507	628	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1439	False	NA	22	True	AATAAA	-23	NA	44282484	44295303	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088303	chr19	+	3865	1	FSM	ENSMUSG00000093315.3	ENSMUST00000175574.3	61	1	-171	-3633	-171	3633	mono-exon	FALSE	NA	NA	NA	NA	NA	643	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	NA	False	NA	22	True	AATAAA	-23	NA	44291438	44295303	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_44291400_44295300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088315	chr19	-	178	1	Intergenic	novelGene_2703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAATCCATTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	44357674	44357496	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_44357500_44357700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088316	chr19	-	182	1	Intergenic	novelGene_2704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCTTAAAGTACTAGTA	NA	False	NA	NA	False	NA	NA	NA	44365723	44365541	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_44365500_44365700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088323	chr19	-	5001	6	FSM	ENSMUSG00000037071.4	ENSMUST00000041331.4	4832	6	-164	-5	6	5	multi-exon	FALSE	canonical	3	439	junction_3	163.124001912655	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTGTGTGGTCACTA	7276	False	NA	0	True	AATAAA	-27	NA	44396312	44382888	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_44386558_44388580_44388814_44390131_44390338_44391603_44391735_44394925_44395200_44395824
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088339	chr19	-	4905	7	NNC	ENSMUSG00000037071.4	novel	4832	6	NA	NA	-2692	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_6	245.996217224755	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGCTTTTGTGTGTGGT	9760	False	NA	-5	True	AATAAA	-22	NA	44399010	44382893	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr19_-_44386558_44388580_44388814_44390131_44390338_44391603_44391735_44394925_44395200_44395824_44396018_44398806
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088347	chr19	-	3665	1	NIC	ENSMUSG00000037071.4	novel	4832	6	NA	NA	8571	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGCTTTTGTGTGTGGT	10000	False	NA	-5	True	AATAAA	-22	NA	44386558	44382893	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_-_44382900_44386600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088351	chr19	+	197	1	Intergenic	novelGene_2705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCCCAGCCAGGCCCAAT	6356	False	NA	NA	False	NA	NA	NA	44517593	44517790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_44517600_44517800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088357	chr19	+	197	1	Intergenic	novelGene_2706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTATCTTGTATGATCT	NA	False	NA	NA	False	NA	NA	NA	44530207	44530404	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_44530200_44530400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088367	chr19	-	682	5	FSM	ENSMUSG00000025204.11	ENSMUST00000026222.11	680	5	-2	0	-2	0	multi-exon	FALSE	canonical	3	4404	junction_1	502.944517317765	226	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTCTTTCTCCAGG	1972	False	NA	-7	True	AATAAA	-29	NA	44543881	44538678	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_44538852_44541136_44541293_44542107_44542208_44543369_44543497_44543755
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088378	chr19	+	6196	8	FSM	ENSMUSG00000036450.5	ENSMUST00000040455.5	6194	8	-2	0	-2	0	multi-exon	FALSE	canonical	3	98	junction_5	13.1583759310508	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTATGTGACTTATTTAAA	NA	False	NA	11	True	NA	NA	NA	44551286	44564713	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_44551494_44551728_44551980_44554316_44554466_44556773_44556920_44557842_44557950_44558331_44558396_44558665_44558777_44559552
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088386	chr19	+	192	1	Intergenic	novelGene_2707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAAGGCTGATAGCTCAG	NA	False	NA	NA	False	NA	NA	NA	44631626	44631818	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_44631600_44631800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088390	chr19	+	6846	20	FSM	ENSMUSG00000036097.9	ENSMUST00000096053.5	6249	20	1	-598	1	487	multi-exon	FALSE	canonical	3	153	junction_11	22.2601092848611	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTCTGGCAACTTTTGAT	1044	False	NA	7	True	ATTAAA	-20	NA	44919590	44972225	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088431	chr19	+	2789	5	FSM	ENSMUSG00000035342.15	ENSMUST00000039016.14	3062	5	318	-45	-17	-27	multi-exon	FALSE	canonical	3	54	junction_1	41.4517792139252	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGCAATGGATAAAGAAACT	1570	False	NA	NA	False	TTTAAA	-9	NA	45003621	45015514	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_45003763_45009825_45010276_45011980_45012644_45013157_45013419_45014240
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088437	chr19	+	2760	5	FSM	ENSMUSG00000035342.15	ENSMUST00000179108.9	2798	5	2	36	2	-27	multi-exon	FALSE	canonical	3	23	junction_1	54.407605166925	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGCAATGGATAAAGAAACT	1589	False	NA	NA	False	TTTAAA	-9	NA	45003640	45015514	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_45003753_45009825_45010276_45011980_45012644_45013157_45013419_45014240
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088462	chr19	-	194	1	Intergenic	novelGene_2708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTAATCTTTGTATTAAG	6710	False	NA	NA	False	NA	NA	NA	45051610	45051416	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_45051400_45051600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088469	chr19	-	180	1	Intergenic	novelGene_2709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAGTGCTTAGTCCAA	NA	False	NA	NA	False	NA	NA	NA	45126290	45126110	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_45126100_45126300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088475	chr19	+	192	1	Intergenic	novelGene_2710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAACCCTATAAATGACAT	8264	False	NA	NA	False	AAGAAA	-3	NA	45243871	45244063	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_45243900_45244100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088479	chr19	+	225	1	Intergenic	novelGene_2711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGTCACGGAAAACCAAGAA	NA	False	NA	NA	False	ATTAAA	-2	NA	45261937	45262162	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_45261900_45262200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088489	chr19	+	194	1	Intergenic	novelGene_2712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAGGAGCAGCCAGTGC	NA	False	NA	NA	False	NA	NA	NA	45276667	45276861	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_45276700_45276900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088494	chr19	+	183	1	Intergenic	novelGene_2713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAAGACTGCCTCAAAGA	NA	False	NA	NA	False	NA	NA	NA	45348576	45348759	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_45348600_45348800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088498	chr19	+	2181	14	FSM	ENSMUSG00000025217.16	ENSMUST00000111936.4	2064	14	-109	-8	-10	4	multi-exon	FALSE	canonical	3	132	junction_1	132.758623339525	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTTGCTTTGCCGTTA	NA	False	NA	21	True	TATAAA	-23	NA	45352162	45517736	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_45352326_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088504	chr19	+	2281	15	FSM	ENSMUSG00000025217.16	ENSMUST00000065601.13	2978	15	-19	716	-2	4	multi-exon	FALSE	canonical	3	261	junction_1	116.411041625118	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTTGCTTTGCCGTTA	NA	False	NA	21	True	TATAAA	-23	NA	45352170	45517736	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_45352326_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088513	chr19	+	2317	16	NIC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	4	4	combination_of_known_junctions	FALSE	canonical	3	157	junction_2	153.826684580046	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTTGCTTTGCCGTTA	NA	False	NA	21	True	TATAAA	-23	NA	45352176	45517736	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_+_45352326_45394983_45395026_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088527	chr19	+	2194	15	NIC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	1	4	combination_of_known_splicesites	FALSE	canonical	3	79	junction_2	163.999393353781	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTTGCTTTGCCGTTA	NA	False	NA	21	True	TATAAA	-23	NA	45352191	45517736	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_+_45352326_45394983_45395026_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088548	chr19	-	133	1	Intergenic	novelGene_2714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCTGGTGAGATGGCTCA	NA	False	NA	NA	False	NA	NA	NA	45376639	45376506	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_45376500_45376600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088553	chr19	+	189	1	Intergenic	novelGene_2715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTCTGCTTGTTTACTT	NA	False	NA	NA	False	NA	NA	NA	45384784	45384973	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_45384800_45385000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088561	chr19	+	181	1	Intergenic	novelGene_2716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTATAGACAAGCTCCT	NA	False	NA	NA	False	NA	NA	NA	45455996	45456177	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_45456000_45456200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088592	chr19	+	196	1	Intergenic	novelGene_2717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGACTCTGAGCATCCT	2390	False	NA	NA	False	NA	NA	NA	45577541	45577737	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_45577500_45577700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088594	chr19	+	207	1	Intergenic	novelGene_2718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCAGCATCTAGATTTC	NA	False	NA	NA	False	NA	NA	NA	45597715	45597922	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_45597700_45597900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088604	chr19	+	245	1	Intergenic	novelGene_2719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTGGTGCCATCAACGC	1924	False	NA	NA	False	NA	NA	NA	45651901	45652146	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_45651900_45652100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088612	chr19	-	883	6	FSM	ENSMUSG00000056209.8	ENSMUST00000070215.8	888	6	5	0	5	0	multi-exon	FALSE	canonical	3	216	junction_3	39.9229257444892	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTGGCTTTTTCAA	4892	False	NA	0	True	AATAAA	-27	NA	45738025	45736172	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_45736491_45736602_45736720_45736984_45737079_45737188_45737309_45737495_45737582_45737877
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088620	chr19	-	5084	16	FSM	ENSMUSG00000025220.9	ENSMUST00000026243.5	5057	16	-22	-5	-22	5	multi-exon	FALSE	canonical	3	653	junction_7	84.8678973464054	971	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGCTGCTTTTTCTCTG	5454	False	NA	-7	True	AATAAA	-18	NA	45772012	45738692	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088654	chr19	-	208	1	Intergenic	novelGene_2720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGCTGGATATGTTGGTA	NA	False	NA	NA	False	NA	NA	NA	45883791	45883583	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_45883600_45883800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088664	chr19	+	204	1	Intergenic	novelGene_2721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGGTAGGGGACTGGAA	NA	False	NA	NA	False	NA	NA	NA	45918788	45918992	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_45918800_45919000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088665	chr19	+	186	1	Intergenic	novelGene_2722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAACTTTTCATGGTCGTT	NA	False	NA	NA	False	NA	NA	NA	45975219	45975405	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_45975200_45975400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088679	chr19	+	210	1	Intergenic	novelGene_2723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	214	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGACCAGTCCTCCTTGC	2940	False	NA	NA	False	NA	NA	NA	46006447	46006657	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_46006400_46006700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088704	chr19	-	2131	11	FSM	ENSMUSG00000025223.16	ENSMUST00000152946.8	2108	11	-22	-1	-22	1	multi-exon	TRUE	canonical	3	192	junction_1	177.433255056655	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCATGTTCCCCTATTC	6696	False	NA	-29	True	ATTAAA	-22	NA	46033675	46021030	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_46021781_46022476_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088735	chr19	+	5226	14	FSM	ENSMUSG00000055491.15	ENSMUST00000111899.8	5246	14	20	0	20	0	multi-exon	TRUE	canonical	3	236	junction_7	80.0611452719015	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCAGCGTGTCCTTTCTG	NA	False	NA	5	True	AATAAA	-17	NA	46044997	46061350	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088742	chr19	+	5110	14	NIC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-19	3	combination_of_known_junctions	FALSE	canonical	3	156	junction_4	105.735071407002	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAGTGGTATTTGGTT	NA	False	NA	16	True	AATAAA	-18	NA	46045000	46061243	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050934_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088746	chr19	+	5214	14	NIC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	156	junction_4	105.996985554994	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCAGCGTGTCCTTTCTG	NA	False	NA	5	True	AATAAA	-17	NA	46045000	46061350	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050934_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088748	chr19	+	5119	14	NIC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-19	3	combination_of_known_junctions	FALSE	canonical	3	238	junction_7	79.6883723412051	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAGTGGTATTTGGTT	NA	False	NA	16	True	AATAAA	-18	NA	46045000	46061243	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088750	chr19	+	5104	14	NNC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-19	3	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_10	135.492177551011	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAGTGGTATTTGGTT	NA	False	NA	16	True	AATAAA	-18	NA	46045000	46061243	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050934_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059963_46060025_46060140_46060263_46060621_46060774_46060987
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088752	chr19	+	5110	14	NNC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-19	3	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_10	119.48246386645	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAGTGGTATTTGGTT	NA	False	NA	16	True	AATAAA	-18	NA	46045000	46061243	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059963_46060025_46060140_46060263_46060621_46060774_46060987
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088784	chr19	+	3652	13	NIC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	-15	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	263.476899156053	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGAGTTATGTCGTTGTG	122	False	NA	17	True	AATAAA	-20	NA	46064286	46073973	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088818	chr19	+	6438	40	NIC	ENSMUSG00000025224.17	novel	6450	40	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_11	14.1633654350608	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTCCCGCTGATTTTC	9051	False	NA	19	True	AATAAA	-19	NA	46140947	46274949	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_+_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269171_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088821	chr19	+	6429	40	FSM	ENSMUSG00000025224.17	ENSMUST00000026254.14	6450	40	21	0	0	0	multi-exon	FALSE	canonical	3	37	junction_33	16.0207377114128	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTCCCGCTGATTTTC	9072	False	NA	19	True	AATAAA	-19	NA	46140968	46274949	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269183_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088834	chr19	+	180	1	Intergenic	novelGene_2724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTAAGGAGAAGATT	NA	False	NA	NA	False	NA	NA	NA	46209286	46209466	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_46209300_46209500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088840	chr19	+	195	1	Intergenic	novelGene_2725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTGTATAATTCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46215528	46215723	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_46215500_46215700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088848	chr19	+	3004	23	FSM	ENSMUSG00000025225.16	ENSMUST00000073116.13	2979	23	-18	-7	-18	2	multi-exon	FALSE	canonical	3	47	junction_13	7.7085334275273	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAATGTGCTGCCCATCC	NA	False	NA	30	True	AATAAA	-35	NA	46293164	46300468	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_46293260_46294368_46294464_46294721_46294804_46294924_46294966_46295209_46295309_46295380_46295533_46295802_46295910_46295998_46296158_46296394_46296500_46296611_46296698_46296783_46296923_46297067_46297194_46297303_46297514_46297593_46297736_46298093_46298209_46298281_46298496_46298646_46298817_46298935_46299039_46299162_46299315_46299447_46299518_46299720_46299894_46300019_46300132_46300211
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088866	chr19	-	1044	9	NIC	ENSMUSG00000036748.17	novel	1050	9	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	390	junction_8	277.077155319597	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5829	False	NA	-2	True	AGTAAA	-19	NA	46327092	46318978	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321141_46327007
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088871	chr19	-	1016	9	FSM	ENSMUSG00000036748.17	ENSMUST00000236980.2	999	9	-11	-6	-1	0	multi-exon	FALSE	canonical	3	133	junction_8	339.490035752156	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5854	False	NA	-2	True	AGTAAA	-19	NA	46327067	46318978	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321138_46327007
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088873	chr19	-	1098	9	FSM	ENSMUSG00000036748.17	ENSMUST00000051234.9	1833	9	7	728	7	0	multi-exon	FALSE	canonical	3	390	junction_8	253.325599525591	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5829	False	NA	-2	True	AGTAAA	-19	NA	46327092	46318978	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46327007
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088902	chr19	-	1197	10	FSM	ENSMUSG00000036748.17	ENSMUST00000236061.2	1164	10	-29	-4	7	0	multi-exon	FALSE	canonical	3	122	junction_9	336.647010794011	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5829	False	NA	-2	True	AGTAAA	-19	NA	46327092	46318978	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326851_46327007
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088945	chr19	+	2427	10	NNC	ENSMUSG00000025227.15	novel	2278	9	NA	NA	-11	2	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	82.6896622735489	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGGTCTGTGCCGTG	4242	False	NA	15	True	AGTAAA	-15	NA	46345362	46363693	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr19_+_46345424_46350784_46350976_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000088953	chr19	-	2779	11	FSM	ENSMUSG00000025228.6	ENSMUST00000040270.6	2757	11	-19	-3	-18	3	multi-exon	FALSE	canonical	3	273	junction_3	19.222122671547	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGACCTCTTTCTGTGAC	NA	False	NA	1	True	AATAAA	-22	NA	46384205	46365246	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_46366909_46367046_46367088_46367851_46367914_46368020_46368196_46368687_46368781_46369355_46369573_46370732_46370858_46372658_46372785_46373451_46373528_46375890_46375956_46384068
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089009	chr19	+	3878	4	FSM	ENSMUSG00000047731.18	ENSMUST00000138302.9	3900	4	22	0	-7	0	multi-exon	FALSE	canonical	3	65	junction_1	42.0898509804389	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTGCCGCTCCTTGTTC	NA	False	NA	24	True	AATAAA	-25	NA	46587544	46645828	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_46587733_46632791_46632895_46640912_46641075_46642403
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089028	chr19	+	191	1	Intergenic	novelGene_2726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATGCTGGGTAAAGATTG	NA	False	NA	NA	False	NA	NA	NA	46721147	46721338	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_46721100_46721300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089030	chr19	-	184	1	Intergenic	novelGene_2727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTCCCTTTCTTTTCTCT	NA	False	NA	NA	False	NA	NA	NA	46737658	46737474	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_46737500_46737700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089043	chr19	-	192	1	Intergenic	novelGene_2728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAACACCTGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	46774850	46774658	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_46774700_46774800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089054	chr19	+	186	1	Intergenic	novelGene_2729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTAAGATCATCCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	46829881	46830067	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_46829900_46830100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089062	chr19	-	1904	18	FSM	ENSMUSG00000025041.18	ENSMUST00000168536.9	3728	18	0	1824	0	355	multi-exon	TRUE	canonical	3	118	junction_5	15.8666589126981	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTATCTGTTCTCT	7192	False	NA	-16	True	TTTAAA	-24	NA	46950747	46877091	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950710
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089073	chr19	-	187	1	Intergenic	novelGene_2730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGGGTGGGGGGGG	2875	False	NA	NA	False	NA	NA	NA	46966692	46966505	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_46966500_46966700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089079	chr19	+	153	1	Intergenic	novelGene_2731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCAGATCCAGATCCACC	621	False	NA	NA	False	NA	NA	NA	46988561	46988714	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_46988600_46988700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089083	chr19	+	3257	3	FSM	ENSMUSG00000034336.4	ENSMUST00000037636.4	3240	3	-17	0	-17	0	multi-exon	FALSE	canonical	3	49	junction_2	0.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGACTCGTGCTCTGTGGT	NA	False	NA	12	True	ATTAAA	-15	NA	47003119	47013766	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_47004259_47010271_47010397_47011773
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089109	chr19	-	2160	10	NNC	ENSMUSG00000025050.9	novel	2159	10	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_2	147.016585945974	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGGTGTGTTGACATA	NA	False	NA	-19	True	AATAAA	-17	NA	47039348	47022055	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr19_-_47023125_47025676_47025760_47028482_47028582_47031204_47031233_47034248_47034358_47036385_47036446_47036546_47036603_47037238_47037336_47037428_47037529_47038889
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089111	chr19	-	2165	11	NIC	ENSMUSG00000025050.9	novel	2159	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_4	203.669830853762	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGGTGTGTTGACATA	NA	False	NA	-19	True	AATAAA	-17	NA	47039331	47022055	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_-_47023125_47025676_47025764_47028482_47028582_47030560_47030579_47031204_47031233_47034248_47034358_47036385_47036446_47036546_47036603_47037238_47037336_47037428_47037529_47038889
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089122	chr19	+	206	1	Intergenic	novelGene_2732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGCAGCTTATAGCTGT	NA	False	NA	NA	False	NA	NA	NA	47053467	47053673	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_47053500_47053700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089130	chr19	+	3279	11	FSM	ENSMUSG00000025049.7	ENSMUST00000026027.7	3260	11	-19	0	-19	0	multi-exon	FALSE	canonical	3	160	junction_3	39.3161544406367	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTGTACAAATTGAGTA	NA	False	NA	15	True	AATAAA	-27	NA	47056165	47071918	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_47056766_47059419_47059658_47063251_47063568_47064174_47064339_47064435_47064572_47065712_47065834_47067206_47067337_47068979_47069145_47070247_47070426_47070582_47070761_47070865
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089150	chr19	-	399	4	FSM	ENSMUSG00000071528.5	ENSMUST00000096014.5	362	4	-33	-4	-29	0	multi-exon	FALSE	canonical	3	3669	junction_3	1157.30270696804	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	NA	False	NA	0	True	AATAAA	-17	NA	47079115	47071902	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_47072009_47074393_47074487_47074572_47074669_47079011
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089151	chr19	-	456	5	NNC	ENSMUSG00000071528.5	novel	425	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2533.27548590752	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	NA	False	NA	0	True	AATAAA	-17	NA	47079086	47071902	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr19_-_47072009_47073211_47073298_47074393_47074487_47074572_47074669_47079011
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089167	chr19	+	6044	36	FSM	ENSMUSG00000025047.10	ENSMUST00000072141.4	6761	36	-2	719	-2	-105	multi-exon	FALSE	canonical	3	156	junction_7	35.2497097976186	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGTGTGTAAAAT	NA	False	NA	26	True	NA	NA	NA	47079204	47119585	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108335_47108685_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089180	chr19	+	3237	4	ISM	ENSMUSG00000006435.17	ENSMUST00000111807.5	3606	6	11380	0	11380	0	3prime_fragment	FALSE	canonical	3	53	junction_1	25.0909456887451	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGGGCTGTGCTGTGC	NA	False	NA	34	True	AATAAA	-16	NA	47228729	47247874	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr19_+_47229111_47241557_47242248_47245150_47245298_47245855
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089186	chr19	+	1595	1	ISM	ENSMUSG00000006435.17	ENSMUST00000111808.11	4158	6	79021	6	28930	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGGGCTGTGCTGTGC	5943	False	NA	34	True	AATAAA	-16	NA	47246279	47247874	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr19_+_47246300_47247900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089210	chr19	+	7340	18	FSM	ENSMUSG00000025060.16	ENSMUST00000026043.12	7278	18	-62	0	-62	0	multi-exon	FALSE	canonical	3	226	junction_7	39.0368471130284	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGGAATTTTCTTTTT	NA	False	NA	21	True	AATAAA	-17	NA	47568054	47633685	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_47568783_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089215	chr19	+	175	1	Intergenic	novelGene_2733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGAAGTAAGTTAATCAC	NA	False	NA	NA	False	NA	NA	NA	47716590	47716765	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_47716600_47716800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089224	chr19	+	1515	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	45	-48	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	786.61442270022	314	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTCATTTTCCTCAT	NA	False	NA	20	True	ATTAAA	-26	NA	47720165	47723979	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr19_+_47720261_47721068_47721192_47721240_47721428_47721957_47722351_47723262
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089253	chr19	+	1150	6	FSM	ENSMUSG00000025068.9	ENSMUST00000026050.8	1182	6	32	0	-28	0	multi-exon	FALSE	canonical	3	277	junction_4	32.103582354622	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGTCCAAACCACCTCAG	8500	False	NA	21	True	ATTAAA	-30	NA	47843440	47853229	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_47843562_47843653_47843763_47846297_47846521_47847870_47847970_47851817_47851922_47852735
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089267	chr19	-	2529	21	FSM	ENSMUSG00000025027.19	ENSMUST00000183108.8	4078	21	1552	-3	-21	0	multi-exon	FALSE	canonical	3	790	junction_19	199.189727395767	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTGTCTGCCTCTTT	5038	False	NA	0	True	AATAAA	-17	NA	53027093	52979610	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026944
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089271	chr19	-	2439	20	NIC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	690	junction_19	186.942819408855	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTGTCTGCCTCTTT	5039	False	NA	0	True	AATAAA	-17	NA	53027092	52979610	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53026944
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089281	chr19	-	205	1	Intergenic	novelGene_2734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGGTGGTAAAAAAATCTC	2353	False	NA	NA	False	NA	NA	NA	53036888	53036683	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_53036700_53036900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089290	chr19	+	180	1	Intergenic	novelGene_2735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	379	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGATGTGTGGTCTGGGT	6326	False	NA	NA	False	NA	NA	NA	53057742	53057922	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_53057700_53057900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089304	chr19	+	4271	15	FSM	ENSMUSG00000025026.16	ENSMUST00000237430.2	4054	15	-217	0	1	0	multi-exon	TRUE	canonical	3	178	junction_5	22.1124214791929	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGGTATAATGGGGT	2484	False	NA	8	True	AATAAA	-17	NA	53131187	53235518	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_53131521_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53232740_53232837_53233428
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089312	chr19	+	2644	6	FSM	ENSMUSG00000025025.15	ENSMUST00000003870.15	2627	6	-17	0	-17	0	multi-exon	FALSE	canonical	3	46	junction_1	71.8843515655528	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGAGTTGTGTGTTAATGT	NA	False	NA	18	True	AATAAA	-23	NA	53298931	53361724	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_53299405_53319781_53319915_53334881_53334912_53357972_53358088_53358620_53358793_53360003
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089319	chr19	+	2483	6	FSM	ENSMUSG00000025025.15	ENSMUST00000111737.3	2340	6	-4	-139	-4	0	multi-exon	FALSE	canonical	3	157	junction_1	29.7859027058103	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGAGTTGTGTGTTAATGT	4410	False	NA	18	True	AATAAA	-23	NA	53317839	53361724	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_53318152_53319781_53319915_53334881_53334912_53357972_53358088_53358620_53358793_53360003
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089345	chr19	+	2429	4	FSM	ENSMUSG00000034765.7	ENSMUST00000038287.7	2473	4	36	8	36	-8	multi-exon	FALSE	canonical	3	31	junction_3	7.25718035235908	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAAGTGCTTGATCCTGTT	NA	False	NA	71	True	NA	NA	NA	53517575	53530854	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_53518128_53522256_53522406_53525887_53526108_53529346
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089351	chr19	+	189	1	Intergenic	novelGene_2736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCACCATGGTCTACTCA	NA	False	NA	NA	False	NA	NA	NA	53571972	53572161	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_53572000_53572200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089353	chr19	-	214	1	Intergenic	novelGene_2737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGCCGGGCGTGGTGGCGC	2265	False	NA	NA	False	NA	NA	NA	53586782	53586568	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_53586600_53586800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089361	chr19	+	185	1	Intergenic	novelGene_2738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAATAATGTTAAGAAA	1903	False	NA	NA	False	NA	NA	NA	53625070	53625255	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_53625100_53625300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089368	chr19	+	175	1	Intergenic	novelGene_2739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCCTGAGCAAGTGGGGT	NA	False	NA	NA	False	NA	NA	NA	53690726	53690901	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_53690700_53690900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089375	chr19	-	184	1	Intergenic	novelGene_2740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATTAATCAATTAGATGG	76	False	NA	NA	False	NA	NA	NA	53791767	53791583	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_53791600_53791800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089393	chr19	+	4053	9	NNC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	-50	147	at_least_one_novel_splicesite	FALSE	canonical	3	220	junction_1	61.2775448267961	342	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTTCCCTACATTTA	3875	False	NA	13	True	AATATA	-15	NA	53933253	54021711	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr19_+_53933327_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089426	chr19	+	2595	22	FSM	ENSMUSG00000024981.7	ENSMUST00000043150.6	4243	22	556	1092	556	950	multi-exon	TRUE	canonical	3	56	junction_1	11.2473730871055	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGCCTGCAGTCTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	55242356	55285060	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_55242599_55257075_55257261_55261200_55261310_55266338_55266404_55266512_55266615_55267895_55267996_55268872_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283804_55283955_55284797
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089429	chr19	-	2175	11	FSM	ENSMUSG00000024982.11	ENSMUST00000224897.2	2168	11	1	-8	-1	8	multi-exon	FALSE	canonical	3	431	junction_6	59.8815497461447	386	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTAGTTTGCTTTTT	7440	False	NA	1	True	AAAAAG	-3	NA	55304463	55286724	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089479	chr19	+	218	1	Intergenic	novelGene_2741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTCTTAAACCATTTATT	NA	False	NA	NA	False	NA	NA	NA	56743091	56743309	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_56743100_56743300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089488	chr19	-	6460	16	FSM	ENSMUSG00000035173.15	ENSMUST00000118592.8	6445	16	-19	4	-19	-4	multi-exon	TRUE	canonical	3	40	junction_2	9.58239125804317	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTGTCTGTTGATGGC	5178	False	NA	-5	True	ATTAAA	-18	NA	56810641	56775916	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_56779479_56780372_56780593_56781727_56781939_56783521_56783603_56785875_56786066_56786998_56787255_56788495_56788639_56789344_56789432_56789598_56789698_56790316_56790422_56795397_56795518_56796409_56796623_56797624_56797754_56798670_56798798_56801426_56802122_56810419
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089495	chr19	+	189	1	Intergenic	novelGene_2742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACCAGCCTGACGCTAG	NA	False	NA	NA	False	NA	NA	NA	56780094	56780283	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_56780100_56780300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089522	chr19	+	1677	8	FSM	ENSMUSG00000025086.14	ENSMUST00000026073.14	3789	8	17	2095	-5	1893	multi-exon	FALSE	canonical	3	146	junction_6	27.9131305507436	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTCCTGCCTGTTCGTT	NA	False	NA	13	True	ATTAAA	-2	NA	57441360	57477342	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57472012_57472086_57473504_57473645_57475696_57475754_57476440
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089533	chr19	+	193	1	Intergenic	novelGene_2743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGACATAGGAATTGGG	NA	False	NA	NA	False	NA	NA	NA	57451848	57452041	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_57451800_57452000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089538	chr19	-	190	1	Intergenic	novelGene_2744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAGAGACAGAGAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	57718286	57718096	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_-_57718100_57718300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089541	chr19	+	172	1	Intergenic	novelGene_2745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTATTTATTAATTTTAT	NA	False	NA	1	True	NA	NA	NA	58057955	58058127	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_58058000_58058100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089560	chr19	+	511	1	FSM	ENSMUSG00000067038.7	ENSMUST00000086764.7	396	1	-83	-32	-83	32	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCCCAGATCACAAGGTT	NA	False	NA	NA	False	AATAAA	-29	NA	59310719	59311230	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_59310700_59311200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089591	chr19	+	191	1	Intergenic	novelGene_2746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAATCGGCCAATGAC	NA	False	NA	NA	False	NA	NA	NA	60325322	60325513	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_60325300_60325500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089603	chr19	+	193	1	Intergenic	novelGene_2747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTTTTAAAAAATATAATC	NA	False	NA	NA	False	NA	NA	NA	60541024	60541217	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_60541000_60541200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089608	chr19	+	205	1	Intergenic	novelGene_2748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGTAAGCTTACTAAA	NA	False	NA	NA	False	NA	NA	NA	60561177	60561382	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_60561200_60561400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089622	chr19	-	5202	22	FSM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	-72	-5	-57	5	multi-exon	FALSE	canonical	0	0	junction_17	309.066534016512	361	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGTCAATGGTGCTA	8682	False	NA	-26	True	AATAAA	-22	NA	60779153	60749549	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089637	chr19	+	2349	9	FSM	ENSMUSG00000024993.16	ENSMUST00000025957.9	2307	9	-34	-8	-8	8	multi-exon	FALSE	canonical	3	273	junction_1	50.1458809375207	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTGATGTCTTTTCATT	NA	False	NA	NA	False	ATTAAA	-21	NA	60800014	60824673	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_60800112_60803049_60803247_60805968_60806049_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089648	chr19	+	2353	9	NIC	ENSMUSG00000024993.16	novel	2307	9	NA	NA	2	8	combination_of_known_junctions	FALSE	canonical	3	138	junction_1	88.7623230881211	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTGATGTCTTTTCATT	NA	False	NA	NA	False	ATTAAA	-21	NA	60800030	60824673	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr19_+_60800112_60803029_60803247_60805968_60806049_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089659	chr19	+	2254	8	FSM	ENSMUSG00000024993.16	ENSMUST00000119633.8	2267	8	21	-8	1	8	multi-exon	FALSE	canonical	3	56	junction_2	141.985771060601	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTGATGTCTTTTCATT	NA	False	NA	NA	False	ATTAAA	-21	NA	60800049	60824673	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_+_60800112_60803029_60803247_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089666	chr19	-	1468	7	FSM	ENSMUSG00000024997.8	ENSMUST00000025961.7	1478	7	-5	15	-5	-15	multi-exon	FALSE	canonical	3	658	junction_4	52.5148127251308	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTTTTTGACTTATTCTG	1442	False	NA	-16	True	AATAAA	-19	NA	60862999	60852503	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr19_-_60853158_60853603_60853770_60855953_60856058_60858441_60858578_60859857_60860000_60861565_60861702_60862869
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089672	chr19	+	178	1	Intergenic	novelGene_2749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATTTATTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	60856372	60856550	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr19_+_60856400_60856600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089696	chr1_GL456211v1_random	+	194	1	Intergenic	novelGene_2750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATGATGGGTCTCTGCA	NA	False	NA	NA	False	NA	NA	NA	52319	52513	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_GL456211v1_random_+_52300_52500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089700	chr1_GL456211v1_random	+	215	1	Intergenic	novelGene_2751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTGCGCCACCATGCCCG	NA	False	NA	NA	False	NA	NA	NA	55728	55943	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_GL456211v1_random_+_55700_55900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089704	chr1_GL456212v1_random	+	213	1	Intergenic	novelGene_2752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	908	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATCTATAAAACAGAAATGC	NA	False	NA	NA	False	NA	NA	NA	29063	29276	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr1_GL456212v1_random_+_29100_29300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089720	chr2	-	185	1	Intergenic	novelGene_2753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGCCATTTAACTTAGTT	NA	False	NA	NA	False	NA	NA	NA	3274210	3274025	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_3274000_3274200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089738	chr2	-	1027	2	FSM	ENSMUSG00000049950.7	ENSMUST00000062672.7	1042	2	15	0	15	0	multi-exon	FALSE	canonical	3	304	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAGGATCCTGCATGGA	2332	False	NA	-15	True	AATAAA	-18	NA	3333665	3329985	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_3330911_3333563
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089772	chr2	-	1787	14	FSM	ENSMUSG00000109865.2	ENSMUST00000027961.12	1795	14	9	-1	9	1	multi-exon	FALSE	canonical	3	902	junction_5	73.9537677425134	309	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGTCTTTGTTTTCTTT	3951	False	NA	-4	True	ATTAAA	-21	NA	3513842	3489885	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089785	chr2	+	496	1	FSM	ENSMUSG00000082580.4	ENSMUST00000122241.2	312	1	-17	-167	-17	167	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACAAAACCAGGAAGCAA	1033	False	NA	NA	False	NA	NA	NA	3551776	3552272	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_3551800_3552300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089794	chr2	+	3164	4	FSM	ENSMUSG00000026655.16	ENSMUST00000027965.11	3156	4	-8	0	-8	0	multi-exon	FALSE	canonical	3	121	junction_1	8.49836585598797	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGTTTGTCTCGTTTGT	936	False	NA	19	True	AATAAA	-25	NA	3714486	3783179	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_3714674_3773832_3774017_3779454_3779606_3780537
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089805	chr2	+	191	1	Intergenic	novelGene_2754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGATGATGGGAACAA	NA	False	NA	NA	False	NA	NA	NA	4535898	4536089	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_4535900_4536100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089816	chr2	-	3553	10	FSM	ENSMUSG00000039449.15	ENSMUST00000035721.14	3522	10	-31	0	-4	0	multi-exon	FALSE	canonical	3	138	junction_5	16.2305914484172	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGTGCTGCTTGATTCA	NA	False	NA	98	True	AGTAAA	-23	NA	4656928	4626868	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_4629338_4638243_4638400_4640441_4640514_4640638_4640780_4641958_4642028_4643659_4643807_4648461_4648576_4650379_4650485_4653051_4653130_4656726
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089825	chr2	+	190	1	Intergenic	novelGene_2755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTATTTGCAAAATACA	NA	False	NA	NA	False	NA	NA	NA	4717198	4717388	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_4717200_4717400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089837	chr2	+	3309	9	FSM	ENSMUSG00000026662.14	ENSMUST00000027973.14	5319	9	-47	2057	-47	363	multi-exon	FALSE	canonical	3	382	junction_1	74.2242169039189	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTGGACTTGCTTCTA	4045	False	NA	23	True	AATAAA	-32	NA	4886327	4913311	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_4886672_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089860	chr2	+	190	1	Intergenic	novelGene_2756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAACGCTCCATGAAAAGG	NA	False	NA	NA	False	NA	NA	NA	4973144	4973334	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_4973100_4973300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089883	chr2	-	4219	20	FSM	ENSMUSG00000026669.15	ENSMUST00000102985.8	4867	20	-362	1010	9	0	multi-exon	FALSE	canonical	2	42	junction_19	167.610417568725	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGTGAAACGTGACTC	NA	False	NA	0	True	AATAAA	-38	NA	5017517	4995534	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5016705
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089885	chr2	-	3544	21	NNC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_18	222.579671129239	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGTGAAACGTGACTC	NA	False	NA	0	True	AATAAA	-38	NA	5017540	4995534	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5013951_5014064_5015499_5015587_5017515
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089896	chr2	-	2002	12	ISM	ENSMUSG00000026672.12	ENSMUST00000027986.5	2411	15	17738	-2	-9003	0	3prime_fragment	FALSE	canonical	3	32	junction_1	36.244349801893	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTATCTGATTTATT	NA	False	NA	0	True	AGTAAA	-17	NA	5051011	5025452	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_-_5026040_5026133_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089903	chr2	-	2093	11	NNC	ENSMUSG00000026672.12	novel	2614	14	NA	NA	-9003	0	intron_retention	FALSE	canonical	3	13	junction_2	42.1739255939022	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTATCTGATTTATT	NA	False	NA	0	True	AGTAAA	-17	NA	5051011	5025452	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_-_5026293_5028877_5028958_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089909	chr2	-	2635	14	FSM	ENSMUSG00000026672.12	ENSMUST00000114996.8	2614	14	-21	0	-15	0	multi-exon	FALSE	canonical	3	74	junction_13	32.625179951441	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTATCTGATTTATT	NA	False	NA	0	True	AGTAAA	-17	NA	5068877	5025452	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350_5059528_5068717
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089925	chr2	+	2723	3	FSM	ENSMUSG00000026676.8	ENSMUST00000027988.8	2670	3	-53	0	-53	0	multi-exon	FALSE	canonical	3	30	junction_2	4	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTGTCTTTGGATCG	4674	False	NA	NA	False	AATAAA	-42	NA	5142533	5235689	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_5143119_5146041_5146217_5233726
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089931	chr2	-	6691	11	FSM	ENSMUSG00000039145.17	ENSMUST00000114987.4	1295	11	34	-5430	34	0	multi-exon	FALSE	canonical	3	40	junction_3	6.22976725086901	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGTTGTCTGTTTCCTA	1211	False	NA	1	True	AATAAA	-21	NA	5680823	5298267	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_5303913_5306306_5306425_5308101_5308190_5315802_5315882_5317899_5318013_5343992_5344069_5359479_5359607_5366799_5366939_5449880_5449956_5570459_5570592_5680724
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089943	chr2	+	191	1	Intergenic	novelGene_2757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTAGGCAGAGTTTAGGC	NA	False	NA	NA	False	NA	NA	NA	5673593	5673784	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_5673600_5673800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089950	chr2	-	1271	13	FSM	ENSMUSG00000039128.14	ENSMUST00000043864.9	1827	13	188	368	-35	3	multi-exon	FALSE	canonical	3	980	junction_5	82.7531050105607	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCTACTGTGATGGTTT	NA	False	NA	-4	True	AATAAA	-18	NA	5849787	5799472	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089955	chr2	-	1222	12	NIC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-20	2	combination_of_known_splicesites	FALSE	canonical	3	91	junction_9	296.801433468727	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCCTACTGTGATGGTT	NA	False	NA	-5	True	AATAAA	-17	NA	5849772	5799473	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5838466_5838525_5846763_5846836_5849645
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089966	chr2	-	1006	8	NIC	ENSMUSG00000039128.14	novel	600	7	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	373.173538445478	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCATCATTGCTTTTTA	NA	False	NA	2	True	AATACA	-18	NA	5849772	5814365	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_5814830_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000089978	chr2	+	190	1	Intergenic	novelGene_2758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCAGTCTTCCTGCTTGC	NA	False	NA	NA	False	NA	NA	NA	5823564	5823754	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_5823600_5823800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090004	chr2	-	180	1	Intergenic	novelGene_2759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGCTTTCAGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	5870390	5870210	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_5870200_5870400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090018	chr2	+	197	1	Intergenic	novelGene_2760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTAGAACAAAGAAGTTGG	754	False	NA	41	True	NA	NA	NA	5952332	5952529	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_5952300_5952500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090046	chr2	-	155	1	Intergenic	novelGene_2761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTCTTAAAAGAAAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	5975563	5975408	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_5975400_5975600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090051	chr2	-	183	1	Intergenic	novelGene_2762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATAAAATAGTGCTAAT	NA	False	NA	NA	False	NA	NA	NA	5988775	5988592	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_5988600_5988800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090060	chr2	+	199	1	Intergenic	novelGene_2763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTCATCATTATACACA	NA	False	NA	NA	False	NA	NA	NA	6016407	6016606	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_6016400_6016600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090067	chr2	+	4948	15	FSM	ENSMUSG00000039046.16	ENSMUST00000114937.8	7484	15	-34	2570	-34	326	multi-exon	FALSE	canonical	3	91	junction_4	18.797660514445	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGACAAAGTGATTCAAA	4620	False	NA	NA	False	AATAAA	-21	NA	6327443	6448631	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090080	chr2	+	162	1	Intergenic	novelGene_2764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTAATAATCCAAGAGATT	NA	False	NA	NA	False	NA	NA	NA	6756885	6757047	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_6756900_6757000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090087	chr2	+	215	1	Intergenic	novelGene_2765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGGGGGTCACCACAGC	NA	False	NA	NA	False	NA	NA	NA	9905052	9905267	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_9905100_9905300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090099	chr2	-	4813	7	FSM	ENSMUSG00000025782.13	ENSMUST00000026888.11	4792	7	-21	0	-21	0	multi-exon	FALSE	canonical	3	96	junction_4	19.5078331845327	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTTCCATTTTCTT	NA	False	NA	0	True	AATAAA	-20	NA	10053428	9919362	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_9921278_9922913_9923021_9925862_9926113_9945737_9945821_9955924_9957757_10047237_10047481_10053045
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090105	chr2	+	192	1	Intergenic	novelGene_2766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGAAAAAAAATAGTCTTC	NA	False	NA	NA	False	NA	NA	NA	10036284	10036476	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_10036300_10036500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090117	chr2	-	1059	9	FSM	ENSMUSG00000025781.15	ENSMUST00000026887.14	1060	9	-13	14	4	0	multi-exon	FALSE	canonical	3	78	junction_1	1503.84357564209	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTCATTATTAATAAT	9574	False	NA	-2	True	AATAAA	-19	NA	10085251	10060840	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_10060973_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090121	chr2	-	1176	10	FSM	ENSMUSG00000025781.15	ENSMUST00000114897.9	1166	10	-10	0	-10	0	multi-exon	FALSE	canonical	3	3857	junction_2	289.314942238504	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTCATTATTAATAAT	9494	False	NA	-2	True	AATAAA	-19	NA	10085331	10060840	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_10060973_10061580_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090129	chr2	-	3890	8	NIC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	7	0	intron_retention	TRUE	canonical	3	4406	junction_5	133.764032260285	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTCATTATTAATAAT	9577	False	NA	-2	True	AATAAA	-19	NA	10085248	10060840	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090140	chr2	-	624	4	NNC	ENSMUSG00000086748.2	novel	1020	4	NA	NA	8800	3	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_3	186.111674957687	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTTCATTCTGTTTT	NA	False	NA	-10	True	AATAAA	-17	NA	10370052	10344090	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_-_10344284_10346331_10346540_10350061_10350197_10369964
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090141	chr2	-	621	4	NNC	ENSMUSG00000086748.2	novel	1020	4	NA	NA	8799	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	241.59608164593	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTTCATTCTGTTTT	NA	False	NA	-10	True	AATAAA	-17	NA	10370053	10344090	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_-_10344284_10346331_10346540_10350061_10350197_10369968
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090179	chr2	-	3600	21	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-3	0	intron_retention	FALSE	canonical	3	88	junction_20	47.1269296687149	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGTACTGTCATTTTT	NA	False	NA	0	True	ATTAAA	-37	NA	11782396	11747383	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782214
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090208	chr2	-	2331	15	FSM	ENSMUSG00000026767.13	ENSMUST00000028105.13	2344	15	13	0	-5	0	multi-exon	FALSE	canonical	3	102	junction_11	25.5990473355904	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCACTTTTACATTTG	NA	False	NA	-22	True	AATAAA	-19	NA	12424268	12352073	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989_12401070_12402303_12402378_12404833_12404949_12405835_12405888_12408808_12408980_12410670_12410732_12414811_12414892_12423969
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090237	chr2	+	1848	10	NIC	ENSMUSG00000026728.10	novel	2193	9	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	86.9850278020786	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGTGTGTTATTTTA	3	True	NA	14	True	AATAAA	-14	NA	13578774	13587637	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_13578872_13579204_13579806_13580351_13580413_13583223_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450_13585495_13586423_13586510_13587283
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090257	chr2	-	3393	8	FSM	ENSMUSG00000003418.12	ENSMUST00000003509.10	7618	8	216	4009	216	2124	multi-exon	FALSE	canonical	3	67	junction_4	4.91146098219174	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGCTCTTTTATGCTGC	NA	False	NA	NA	False	AATAAA	-29	NA	13798659	13659840	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_13662102_13670230_13670324_13673595_13673709_13677293_13677439_13701638_13701726_13728253_13728344_13797564_13797664_13798154
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090270	chr2	+	3816	14	FSM	ENSMUSG00000026718.18	ENSMUST00000102960.11	5000	14	35	1149	25	945	multi-exon	TRUE	canonical	3	181	junction_8	24.7443735759998	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTCTTAGTTACGTCAC	4717	False	NA	14	True	AATAAA	-14	NA	14078943	14153296	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090275	chr2	+	212	1	Intergenic	novelGene_2767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGATTCAGTACTGATC	9777	False	NA	NA	False	NA	NA	NA	14084003	14084215	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_14084000_14084200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090281	chr2	+	6947	6	FSM	ENSMUSG00000017418.15	ENSMUST00000069870.11	6981	6	34	0	-13	0	multi-exon	FALSE	canonical	3	92	junction_3	13.7346277707115	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTAGCCTGTGTTTTCTTT	4692	False	NA	16	True	AATAAA	-18	NA	15060084	15087267	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_15060386_15072949_15073011_15074630_15074779_15077934_15078019_15079772_15079925_15081066
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090296	chr2	+	196	1	Intergenic	novelGene_2768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACAATCTATGGTCACCT	NA	False	NA	NA	False	NA	NA	NA	16313274	16313470	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_16313300_16313500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090317	chr2	+	214	1	Intergenic	novelGene_2769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACTGAATTACCAAAAGC	NA	False	NA	NA	False	NA	NA	NA	17850487	17850701	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_17850500_17850700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090322	chr2	+	173	1	Intergenic	novelGene_2770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAAATATCCAGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	17939723	17939896	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_17939700_17939900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090330	chr2	+	195	1	Intergenic	novelGene_2771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTCTGCCTGCAACCATA	NA	False	NA	NA	False	NA	NA	NA	17974645	17974840	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_17974600_17974800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090342	chr2	+	5073	23	FSM	ENSMUSG00000026743.17	ENSMUST00000114680.9	3543	23	-110	-1420	-59	2	multi-exon	FALSE	canonical	3	88	junction_1	48.8940497317777	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4583	False	NA	14	True	AATAAA	-18	NA	18069387	18217201	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_18069676_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090345	chr2	+	5039	23	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-51	2	combination_of_known_junctions	FALSE	canonical	3	102	junction_1	47.2740384433549	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4591	False	NA	14	True	AATAAA	-18	NA	18069395	18217201	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090366	chr2	+	201	1	Intergenic	novelGene_2772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTCAGATCATATGAAGAC	NA	False	NA	NA	False	NA	NA	NA	18122320	18122521	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_18122300_18122500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090404	chr2	+	213	1	Intergenic	novelGene_2773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	215	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGGCCTATGTTATG	7533	False	NA	NA	False	TTTAAA	-13	NA	19308121	19308334	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_19308100_19308300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090417	chr2	+	1186	5	FSM	ENSMUSG00000023094.15	ENSMUST00000023856.9	1196	5	10	0	10	0	multi-exon	FALSE	canonical	3	137	junction_1	15.0996688705415	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTGTCTCAGTCTGT	4794	False	NA	19	True	AATAAA	-20	NA	19376456	19399787	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_19376591_19382972_19383074_19388051_19388129_19398018_19398167_19399061
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090431	chr2	+	186	1	Intergenic	novelGene_2774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGGTTTTGAAAAATTTAA	NA	False	NA	NA	False	NA	NA	NA	20162152	20162338	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_20162200_20162300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090438	chr2	+	5624	18	ISM	ENSMUSG00000036617.18	ENSMUST00000045555.11	5931	19	9560	0	-184	0	3prime_fragment	FALSE	canonical	3	69	junction_16	36.8251268212062	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	4612	False	NA	22	True	AATAAA	-14	NA	20524417	20815335	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090446	chr2	+	7294	20	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-177	0	combination_of_known_junctions	FALSE	canonical	3	91	junction_16	40.2682831275283	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	4619	False	NA	22	True	AATAAA	-14	NA	20524424	20815335	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090460	chr2	+	196	1	Intergenic	novelGene_2775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGAGACAACTTAGCTGG	394	False	NA	NA	False	NA	NA	NA	20672263	20672459	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_20672300_20672500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090463	chr2	+	358	1	Intergenic	novelGene_2776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTGCAACTCAACAGATG	9433	False	NA	NA	False	NA	NA	NA	20775280	20775638	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_20775300_20775600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090467	chr2	+	173	1	Intergenic	novelGene_2777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTTAAAAAAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	20835310	20835483	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_20835300_20835500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090470	chr2	-	7045	25	NIC	ENSMUSG00000036591.17	novel	6339	26	NA	NA	24	7	combination_of_known_junctions	FALSE	canonical	3	40	junction_24	19.6061480578585	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGGGAGCTTACTTGGT	NA	False	NA	-14	True	AATAAA	-22	NA	20973412	20852743	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20973294
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090500	chr2	-	99	1	FSM	ENSMUSG00000083563.2	ENSMUST00000117219.2	1545	1	1517	-71	1517	71	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATATTAGTAAAATCAATTA	NA	False	NA	NA	False	NA	NA	NA	22478142	22478043	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_22478000_22478100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090503	chr2	+	1680	11	FSM	ENSMUSG00000026784.15	ENSMUST00000053729.14	1642	11	-38	0	-38	0	multi-exon	FALSE	canonical	3	239	junction_4	19.641792178923	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTTGTCTTTGTTTCAC	5570	False	NA	19	True	AATAAA	-21	NA	22785495	22830278	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22819755_22819870_22825570_22825652_22829834
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090516	chr2	+	191	1	Intergenic	novelGene_2778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCTGCCTCTACTTCCC	6026	False	NA	NA	False	NA	NA	NA	22810782	22810973	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_22810800_22811000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090543	chr2	+	194	1	Intergenic	novelGene_2779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTGAAAGAAAGCCGGAT	2218	False	NA	NA	False	NA	NA	NA	22930777	22930971	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_22930800_22931000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090556	chr2	+	3569	13	FSM	ENSMUSG00000026781.18	ENSMUST00000028121.15	3630	13	61	0	-6	0	multi-exon	FALSE	canonical	3	36	junction_1	26.6993289553627	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAACTGTATTGACTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	22958240	23004525	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_22958299_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989573_22989777_23000256_23000299_23000665_23000776_23002516
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090568	chr2	-	6662	12	FSM	ENSMUSG00000026779.7	ENSMUST00000028119.7	5590	12	94	-1166	-33	1166	multi-exon	TRUE	canonical	3	112	junction_2	17.5310821963508	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATAGCTGTCGATTTCTAA	NA	False	NA	NA	False	AATAAA	-27	NA	23045942	23004451	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090583	chr2	+	4559	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	139	9	-10	-9	multi-exon	TRUE	canonical	3	665	junction_5	65.7463325738674	209	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTTATCACATTCCAA	7212	False	NA	15	True	AATAAA	-17	NA	23046519	23089263	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090588	chr2	-	187	1	Intergenic	novelGene_2780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAGATGACTAATTAA	918	False	NA	NA	False	NA	NA	NA	23154976	23154789	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_23154800_23155000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090602	chr2	-	5091	27	FSM	ENSMUSG00000036893.18	ENSMUST00000102938.10	4680	27	-23	-388	0	26	multi-exon	TRUE	canonical	3	154	junction_23	33.3131324390158	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCATTATGACACATTC	9590	False	NA	1	True	AATAAA	-21	NA	24809626	24680780	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777082_24809565
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090609	chr2	-	5088	27	FSM	ENSMUSG00000036893.18	ENSMUST00000091348.11	4615	27	-27	-446	0	26	multi-exon	FALSE	canonical	3	73	junction_26	45.6963867643122	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCATTATGACACATTC	9590	False	NA	1	True	AATAAA	-21	NA	24809626	24680780	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777079_24809565
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090621	chr2	-	5106	27	FSM	ENSMUSG00000036893.18	ENSMUST00000147147.8	5953	27	4	843	-3	24	multi-exon	FALSE	canonical	3	34	junction_23	50.1601134592868	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTTCATTATGACACAT	9594	False	NA	-1	True	AATAAA	-19	NA	24809622	24680782	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753942_24767466_24767639_24774157_24774715_24777014_24777082_24809565
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090641	chr2	-	1622	8	FSM	ENSMUSG00000026972.16	ENSMUST00000028349.14	1666	8	44	0	-20	0	multi-exon	FALSE	canonical	3	62	junction_2	7.55658923167897	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCGAGTGGCTGGCCT	9361	False	NA	-31	True	AATAAA	-17	NA	24825220	24815363	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_24815689_24815767_24816207_24816283_24816461_24816556_24816740_24816889_24817045_24817137_24817189_24817740_24817852_24825039
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090651	chr2	+	180	1	Intergenic	novelGene_2781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAAAAAGAGTGAGGAAGA	NA	False	NA	NA	False	NA	NA	NA	24829221	24829401	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_24829200_24829400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090676	chr2	-	745	2	FSM	ENSMUSG00000036850.5	ENSMUST00000045604.4	776	2	34	-3	34	3	multi-exon	FALSE	canonical	3	317	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTTGAATCAAGTCAT	NA	False	NA	0	True	ATTAAA	-24	NA	24865076	24864125	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_24864694_24864899
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090694	chr2	+	568	1	FSM	ENSMUSG00000084383.2	ENSMUST00000121309.2	483	1	-35	-50	-35	50	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAACAATGTTAATAGCCA	NA	False	NA	NA	False	AATAAA	-33	NA	24875960	24876528	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_24876000_24876500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090704	chr2	-	178	1	Intergenic	novelGene_2782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGACAGAATATTT	9349	False	NA	NA	False	NA	NA	NA	24925832	24925654	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_24925700_24925800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090714	chr2	+	181	1	Intergenic	novelGene_2783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAATAAGAAGACTGAGC	4812	False	NA	NA	False	NA	NA	NA	25059325	25059506	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_25059300_25059500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090720	chr2	+	2583	1	FSM	ENSMUSG00000078202.4	ENSMUST00000104999.4	2582	1	-1	0	-1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGTTTTAATTTTGGCA	7950	False	NA	NA	False	AATAAA	-33	NA	25070768	25073351	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_25070800_25073400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090723	chr2	-	233	1	Intergenic	novelGene_2784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCTATTTAATAATTCCT	NA	False	NA	NA	False	NA	NA	NA	25082907	25082674	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_25082700_25082900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090730	chr2	-	3253	2	FSM	ENSMUSG00000059555.7	ENSMUST00000081869.7	3255	2	269	-267	142	267	multi-exon	FALSE	canonical	3	13	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTTAATGGTAAATTCAC	8531	False	NA	NA	False	NA	NA	NA	25086629	25082710	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_25085938_25086603
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090737	chr2	-	2587	13	FSM	ENSMUSG00000013465.20	ENSMUST00000059849.15	2637	13	50	0	50	0	multi-exon	TRUE	canonical	3	539	junction_7	54.5501807716732	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGAGGAATCTGTTTGTC	NA	False	NA	NA	False	AATAAA	-20	NA	25101451	25089723	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_25090479_25090670_25090780_25091056_25091199_25093152_25093260_25093359_25093503_25093898_25093995_25094209_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720_25100885_25101113
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090746	chr2	-	222	1	ISM	ENSMUSG00000013465.20	ENSMUST00000059849.15	2637	13	11552	4	3664	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGTGAGGAATCTGTT	5211	False	NA	NA	False	AATAAA	-16	NA	25089949	25089727	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_-_25089700_25089900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090770	chr2	-	1479	3	ISM	ENSMUSG00000036752.5	ENSMUST00000043584.5	1598	4	418	2	370	-2	3prime_fragment	FALSE	canonical	3	1343	junction_2	31.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTCGCCTGTCCAATTC	NA	False	NA	-26	True	ATTAAA	-16	NA	25114296	25112173	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_-_25113381_25113945_25114057_25114135
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090780	chr2	-	2114	3	NIC	ENSMUSG00000036752.5	novel	1598	4	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	1343	junction_1	13	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTTCGCCTGTCCAAT	NA	False	NA	-28	True	ATTAAA	-14	NA	25114669	25112175	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_25114057_25114135_25114245_25114545
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090802	chr2	+	854	1	FSM	ENSMUSG00000078201.6	ENSMUST00000104998.5	854	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGCTCTGAATTGCCAG	NA	False	NA	6	True	ATTAAA	-16	NA	25145450	25146304	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_25145400_25146300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090810	chr2	+	181	1	Intergenic	novelGene_2785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGGGTGTTATGCAGCAAA	NA	False	NA	9	True	NA	NA	NA	25147475	25147656	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_25147500_25147700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090814	chr2	+	194	1	Intergenic	novelGene_2786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGAGTCCTGGTGGTTC	NA	False	NA	NA	False	NA	NA	NA	25149922	25150116	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_25149900_25150100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090815	chr2	+	2868	4	FSM	ENSMUSG00000048707.10	ENSMUST00000114336.4	2787	4	-79	-2	-79	2	multi-exon	FALSE	canonical	3	142	junction_1	10.4986771653491	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTGCCTTCTTTACAC	NA	False	NA	16	True	AATAAA	-18	NA	25152550	25159899	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_25154566_25158843_25159058_25159144_25159252_25159367
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090826	chr2	-	1026	2	FSM	ENSMUSG00000026966.7	ENSMUST00000141470.2	1006	2	27	-47	-1	0	multi-exon	FALSE	canonical	3	843	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCTGCTAGCTACCA	NA	False	NA	-6	True	AATAAA	-16	NA	25162423	25161050	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_25161594_25161940
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090847	chr2	+	3015	13	FSM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	-10	-1	-10	1	multi-exon	TRUE	canonical	3	410	junction_2	48.8355374929182	243	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGTGGCATCTGTGG	NA	False	NA	19	True	ATTAAA	-20	NA	25162479	25175928	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_25162690_25162926_25163550_25163811_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090869	chr2	-	179	1	Antisense	novelGene_ENSMUSG00000085830.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAATCTGAAAAATA	7692	False	NA	NA	False	NA	NA	NA	25189099	25188920	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr2_-_25188900_25189100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090876	chr2	+	3743	13	FSM	ENSMUSG00000036646.14	ENSMUST00000042390.5	3755	13	12	0	12	0	multi-exon	FALSE	canonical	3	302	junction_8	34.4394597647653	264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCAGTGTTACTTT	3977	False	NA	33	True	ATTAAA	-21	NA	25222752	25242224	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238239_25238582_25238704_25239181_25239380_25239462_25239595_25240373
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090894	chr2	+	201	1	Intergenic	novelGene_2787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTAGGGAGAAGCCCTTG	3671	False	NA	NA	False	NA	NA	NA	25229094	25229295	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_25229100_25229300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090897	chr2	+	229	1	Intergenic	novelGene_2788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATCATTCTTTTTGGGT	6598	False	NA	NA	False	AAAAAG	-25	NA	25232021	25232250	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_25232000_25232200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090901	chr2	-	1683	13	FSM	ENSMUSG00000026958.14	ENSMUST00000028332.8	1682	13	-1	0	-1	0	multi-exon	FALSE	canonical	3	250	junction_10	27.0014145719977	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTAGTAGGATCCATG	9000	False	NA	-17	True	AATAAA	-17	NA	25246372	25242301	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25243619_25243739_25244244_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245825_25245966_25246040_25246155_25246242
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090905	chr2	-	2164	12	NIC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	-3	0	intron_retention	FALSE	canonical	3	250	junction_9	27.0732095933591	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTAGTAGGATCCATG	9025	False	NA	-17	True	AATAAA	-17	NA	25246347	25242301	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25243619_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245825_25245966_25246040_25246155_25246242
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090918	chr2	-	1754	9	FSM	ENSMUSG00000026956.16	ENSMUST00000102925.4	3349	9	0	1595	0	5	multi-exon	FALSE	canonical	3	362	junction_3	36.5288841192829	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGTCTATTTTTTTGT	NA	False	NA	-10	True	NA	NA	NA	25255694	25251495	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_25251752_25252082_25252150_25252674_25252861_25253255_25253397_25253817_25254012_25254112_25254286_25254523_25254700_25254892_25255098_25255338
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090931	chr2	+	202	1	Intergenic	novelGene_2789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTCTGTCCTTGCCCCGG	295	False	NA	NA	False	NA	NA	NA	25255970	25256172	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_25256000_25256200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090937	chr2	+	293	1	Intergenic	novelGene_2790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATCCAAACTAAAAAGCACC	2110	False	NA	NA	False	NA	NA	NA	25257785	25258078	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_25257800_25258100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090947	chr2	+	1609	6	FSM	ENSMUSG00000026955.14	ENSMUST00000114293.9	1600	6	-9	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	40.9536323175369	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCTGTATTTCTCATAA	6657	False	NA	6	True	AGTAAA	-15	NA	25262332	25266815	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_25263011_25264963_25265077_25265696_25265844_25265979_25266088_25266175_25266287_25266363
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090949	chr2	+	2395	7	FSM	ENSMUSG00000026955.14	ENSMUST00000028329.13	3121	7	2	724	2	686	multi-exon	FALSE	canonical	3	90	junction_3	10.077477638554	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGTCTGCATCTTTTAAT	6659	False	NA	8	True	NA	NA	NA	25262334	25267501	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_25263011_25263427_25263530_25264963_25265077_25265696_25265844_25265979_25266088_25266175_25266287_25266363
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090986	chr2	+	2308	9	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_3	79.815314163386	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATCTAGTCTGTTTG	NA	False	NA	16	True	AATAAA	-16	NA	25390855	25395483	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_25390899_25391947_25392164_25392412_25392571_25392868_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000090995	chr2	+	3655	7	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-14	0	intron_retention	FALSE	canonical	3	231	junction_2	20.763884243775	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATCTAGTCTGTTTG	NA	False	NA	16	True	AATAAA	-16	NA	25390856	25395483	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_25392164_25392412_25392571_25392882_25393058_25393136_25393286_25393448_25394340_25394428_25394642_25394721
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091007	chr2	+	3340	8	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-12	0	intron_retention	FALSE	canonical	3	227	junction_5	21.7649784220956	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATCTAGTCTGTTTG	NA	False	NA	16	True	AATAAA	-16	NA	25390858	25395483	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_25392164_25392412_25392571_25392882_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091028	chr2	+	188	1	Intergenic	novelGene_2791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTTAAAACTTTTT	NA	False	NA	NA	False	NA	NA	NA	25445571	25445759	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_25445600_25445800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091032	chr2	+	727	5	FSM	ENSMUSG00000015092.10	ENSMUST00000015236.4	722	5	-3	-2	-3	2	multi-exon	FALSE	canonical	3	2396	junction_4	232.166965781095	233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTGGATTTTTCCTCC	NA	False	NA	19	True	NA	NA	NA	25447855	25452096	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_25448042_25450162_25450215_25450551_25450713_25450980_25451075_25451862
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091052	chr2	-	3193	15	FSM	ENSMUSG00000015087.15	ENSMUST00000058137.9	3230	15	42	-5	6	5	multi-exon	FALSE	canonical	3	258	junction_7	28.5093074669466	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGACTCTTTTTCTGG	3260	False	NA	-1	True	CATAAA	-20	NA	25498491	25473024	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_25474001_25474114_25474174_25474787_25474957_25475319_25475549_25475635_25475846_25476879_25477031_25477286_25477640_25478620_25478725_25482309_25482416_25482778_25482920_25486444_25486537_25488156_25488210_25491362_25491411_25492432_25492568_25498124
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091079	chr2	-	6589	17	NIC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	-11	287	combination_of_known_junctions	FALSE	canonical	3	81	junction_13	18.9348182919721	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTGTGGTTGTCACA	NA	False	NA	-2	True	AATAAA	-24	NA	25873305	25818255	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25846258_25846340_25855674_25855837_25856697_25856961_25872793
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091090	chr2	-	1881	10	FSM	ENSMUSG00000036352.17	ENSMUST00000036509.14	1852	10	-27	-2	-27	2	multi-exon	FALSE	canonical	3	686	junction_2	68.2632884002073	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTTACTTCATGGCAG	NA	False	NA	-1	True	AATAAA	-22	NA	25911786	25888552	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_25889080_25895337_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911408
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091105	chr2	-	458	1	ISM	ENSMUSG00000036352.17	ENSMUST00000123275.8	814	3	8916	4	8916	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTACTTGTGTTACTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	25889016	25888558	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_-_25888600_25889000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091111	chr2	+	190	1	Intergenic	novelGene_2792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAACAGGGGCTAACTCTT	NA	False	NA	NA	False	NA	NA	NA	25908929	25909119	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_25908900_25909100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091117	chr2	-	176	1	Intergenic	novelGene_2793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAACTTACAAA	NA	False	NA	NA	False	NA	NA	NA	25921051	25920875	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_25920900_25921100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091126	chr2	-	2949	6	FSM	ENSMUSG00000026932.15	ENSMUST00000028300.6	6378	6	-13	3442	-13	2087	multi-exon	FALSE	canonical	3	39	junction_4	3.79473319220206	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGAGACTAGTGTCCCTG	8886	False	NA	NA	False	NA	NA	NA	26012843	25948988	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465_25954631_25979554_25980495_26012700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091141	chr2	+	193	1	Intergenic	novelGene_2794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAGCCAAGATGCTCCAA	NA	False	NA	NA	False	NA	NA	NA	25959887	25960080	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_25959900_25960100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091144	chr2	+	191	1	Intergenic	novelGene_2795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGGGCTAATGAGGATAT	NA	False	NA	NA	False	NA	NA	NA	26017415	26017606	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_26017400_26017600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091162	chr2	-	191	1	Intergenic	novelGene_2796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTAATGTGGCCCATTTC	NA	False	NA	4	True	TTTAAA	-1	NA	26035049	26034858	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_26034900_26035000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091170	chr2	-	2409	13	FSM	ENSMUSG00000036327.19	ENSMUST00000036187.9	2559	13	150	0	150	0	multi-exon	FALSE	canonical	3	18	junction_1	31.8210054663408	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTCAGTTTTTTGAAA	NA	False	NA	NA	False	AATAAA	-21	NA	26127387	26099136	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_26099806_26101285_26101472_26103992_26104182_26107644_26107796_26108620_26108744_26110641_26110772_26110920_26111056_26112232_26112379_26114852_26114944_26115160_26115267_26116249_26116299_26118358_26118460_26127054
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091187	chr2	+	197	1	Intergenic	novelGene_2797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTACTTTGGTTCTGCCA	NA	False	NA	NA	False	NA	NA	NA	26123513	26123710	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_26123500_26123700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091201	chr2	+	202	1	Intergenic	novelGene_2798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	310	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGGAGGTGAGGTTGTG	NA	False	NA	NA	False	NA	NA	NA	26176901	26177103	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_26176900_26177100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091227	chr2	-	4345	23	FSM	ENSMUSG00000036281.14	ENSMUST00000114115.9	4368	23	23	0	0	0	multi-exon	FALSE	canonical	3	40	junction_10	11.6217948571845	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATAGCCTTTGGTGATTT	NA	False	NA	-3	True	AATAAA	-31	NA	26270638	26252776	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_26253033_26253649_26253781_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091243	chr2	-	2047	9	FSM	ENSMUSG00000026927.18	ENSMUST00000028293.12	2031	9	-12	-4	0	4	multi-exon	FALSE	canonical	3	146	junction_8	70.8147892392543	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTCTTGTCATTTACTC	NA	False	NA	1	True	AATAAA	-17	NA	26279328	26272809	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26279160
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091294	chr2	+	3151	13	FSM	ENSMUSG00000026926.15	ENSMUST00000076431.13	3135	13	-9	-7	-9	7	multi-exon	FALSE	canonical	3	1351	junction_8	105.114619979018	499	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCCTAGGTGTCTGTACA	635	False	NA	26	True	AATAAA	-23	NA	26279341	26287141	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091318	chr2	-	8802	31	FSM	ENSMUSG00000026924.18	ENSMUST00000114082.9	8797	31	-5	0	-3	0	multi-exon	FALSE	canonical	3	86	junction_3	26.343373613365	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGGCTTCCTTTGTGTT	NA	False	NA	0	True	AATAAA	-27	NA	26335231	26299442	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_26300966_26302847_26302926_26303690_26303751_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091319	chr2	-	8743	30	FSM	ENSMUSG00000026924.18	ENSMUST00000091252.5	8737	30	-4	-2	-4	0	multi-exon	FALSE	canonical	3	97	junction_2	23.0104665219992	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGGCTTCCTTTGTGTT	NA	False	NA	0	True	AATAAA	-27	NA	26335232	26299442	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_26300966_26302847_26302926_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091343	chr2	+	195	1	Intergenic	novelGene_2799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCCTAAAGCCGGATGGT	NA	False	NA	NA	False	NA	NA	NA	26414002	26414197	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_26414000_26414200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091373	chr2	+	1589	5	FSM	ENSMUSG00000036186.6	ENSMUST00000074240.4	1622	5	33	0	-4	0	multi-exon	FALSE	canonical	3	50	junction_4	8.55496931613434	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGGTATGTGGATCCTTT	2468	False	NA	17	True	AATAAA	-17	NA	26518501	26526509	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_26518712_26522615_26522751_26524799_26524908_26524998_26525176_26525550
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091378	chr2	-	742	4	Intergenic	novelGene_2800	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	46	junction_3	6.37704215656966	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGAATCTTTCTTTGCT	NA	False	NA	-6	True	AATAAA	-16	NA	26530256	26527187	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_26527646_26528052_26528108_26529441_26529484_26530069
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091383	chr2	+	167	1	Intergenic	novelGene_2801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTAAGAACTGATTGATCT	NA	False	NA	NA	False	NA	NA	NA	26755689	26755856	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_26755700_26755900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091392	chr2	+	177	1	Intergenic	novelGene_2802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAAATTCCTACAGAAA	NA	False	NA	NA	False	NA	NA	NA	26756717	26756894	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_26756700_26756900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091412	chr2	+	191	1	Intergenic	novelGene_2803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCCTGGCTCTACAAGG	NA	False	NA	NA	False	NA	NA	NA	26783279	26783470	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_26783300_26783500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091438	chr2	+	925	8	FSM	ENSMUSG00000062647.17	ENSMUST00000102898.5	914	8	-11	0	-11	0	multi-exon	FALSE	canonical	3	2861	junction_1	795.089880684786	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTGGTTATTTGGGT	NA	False	NA	6	True	AATATA	-19	NA	26800764	26803330	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_26800843_26801017_26801139_26801433_26801584_26802030_26802172_26802377_26802458_26802682_26802814_26802999_26803070_26803176
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091444	chr2	+	1041	7	NIC	ENSMUSG00000062647.17	novel	914	8	NA	NA	-11	-6	intron_retention	FALSE	canonical	3	4686	junction_6	264.743114483959	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGACTGCCTTTGGTTAT	NA	False	NA	0	True	AATATA	-13	NA	26800817	26803324	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_26801139_26801433_26801584_26802030_26802172_26802377_26802458_26802682_26802814_26802999_26803070_26803176
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091463	chr2	-	994	9	FSM	ENSMUSG00000015790.17	ENSMUST00000015934.13	1173	9	179	0	-6	0	multi-exon	FALSE	canonical	3	328	junction_4	27.1834048639974	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCTCAGTCTGAAACC	NA	False	NA	-5	True	AATAAA	-19	NA	26806363	26803394	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805742_26805966_26806019_26806268
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091485	chr2	-	2883	6	FSM	ENSMUSG00000014867.10	ENSMUST00000015011.10	3281	6	400	-2	-145	2	multi-exon	TRUE	canonical	3	778	junction_1	38.262252939418	743	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTGGTCCTATATGGTG	NA	False	NA	0	True	AATAAA	-20	NA	26823540	26810049	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_26812184_26814356_26814544_26814964_26815009_26815619_26815697_26816780_26816968_26823286
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091514	chr2	-	174	1	Intergenic	novelGene_2804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTTGTTGTTTTTAAC	7640	False	NA	NA	False	NA	NA	NA	26925795	26925621	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_26925600_26925800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091525	chr2	+	186	1	Intergenic	novelGene_2805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCTGAGGCAGGAAAATT	NA	False	NA	NA	False	NA	NA	NA	27327232	27327418	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_27327200_27327400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091547	chr2	+	142	1	Intergenic	novelGene_2806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTTTTTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	27375717	27375859	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_27375700_27375900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091553	chr2	+	2919	14	FSM	ENSMUSG00000026917.16	ENSMUST00000113952.10	2890	14	-14	-15	-14	15	multi-exon	FALSE	canonical	3	1324	junction_4	114.959164347413	657	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTTTTCCAGGAATT	NA	False	NA	48	True	AATAAA	-34	NA	27405154	27426562	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091590	chr2	+	2759	6	FSM	ENSMUSG00000026833.19	ENSMUST00000028177.11	2757	6	-2	0	-2	0	multi-exon	FALSE	canonical	3	35	junction_4	5.85149553533112	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGATTTGCTTATTGTCT	201	False	NA	NA	False	AATAAA	-16	NA	28095668	28120748	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_28096112_28098089_28098240_28102543_28102700_28104620_28104841_28112562_28112670_28119065
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091604	chr2	+	2092	4	FSM	ENSMUSG00000035772.12	ENSMUST00000038600.4	2080	4	-3	-9	-3	9	multi-exon	FALSE	canonical	3	508	junction_2	49.4592986426438	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTTGAACCCGTACCAA	NA	False	NA	37	True	NA	NA	NA	28358074	28361199	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_28358155_28358254_28358372_28358832_28358963_28359434
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091616	chr2	+	182	1	FSM	ENSMUSG00000082895.2	ENSMUST00000120702.2	885	1	791	-88	791	88	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGACTCCAATGGTAGA	NA	False	NA	NA	False	AATAAA	-36	NA	28367968	28368150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_28368000_28368200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091623	chr2	-	178	1	Intergenic	novelGene_2807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAGGGGGGGGTGTCCA	NA	False	NA	NA	False	NA	NA	NA	28392788	28392610	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_28392600_28392800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091641	chr2	+	185	1	Intergenic	novelGene_2808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGCCACCACGTCCCG	151	False	NA	NA	False	NA	NA	NA	28447126	28447311	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_28447100_28447300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091643	chr2	-	2664	12	FSM	ENSMUSG00000026816.15	ENSMUST00000028157.9	2739	12	75	0	-15	0	multi-exon	TRUE	canonical	3	147	junction_7	20.5992858738452	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGGTGTTTGATGCCCT	NA	False	NA	-49	True	AATAAA	-22	NA	28473216	28456322	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_28457190_28457619_28457797_28458496_28458640_28459303_28459387_28460430_28460529_28460624_28460706_28461124_28461240_28462207_28462313_28463388_28463585_28467887_28468087_28469529_28469750_28472836
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091654	chr2	+	244	1	Intergenic	novelGene_2809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGGAGCCGGGTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	28495261	28495505	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_28495300_28495500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091666	chr2	-	179	1	Intergenic	novelGene_2810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAACAGATCCATG	NA	False	NA	NA	False	NA	NA	NA	28514202	28514023	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_28514000_28514200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091676	chr2	-	7009	5	FSM	ENSMUSG00000035666.15	ENSMUST00000037117.6	6941	5	-62	-6	4	0	multi-exon	FALSE	canonical	3	186	junction_4	18.8215302247187	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGATTTTTTTTTATTCTT	NA	False	NA	1	True	AATAAA	-25	NA	28730360	28712310	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28729894
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091694	chr2	+	3296	20	FSM	ENSMUSG00000026806.16	ENSMUST00000113853.3	3271	20	-25	0	-25	0	multi-exon	FALSE	canonical	3	96	junction_10	16.137738156191	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAGGACTCAGCAGAGAAA	NA	False	NA	18	True	AATAAA	-19	NA	28730445	28795583	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_28730873_28734849_28735107_28735209_28735286_28736005_28736050_28737452_28737524_28738297_28738363_28744782_28744828_28746206_28746249_28747131_28747197_28748747_28748868_28748999_28749107_28749880_28750090_28750727_28750905_28753727_28753788_28764142_28764194_28765701_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28794600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091702	chr2	+	192	1	Intergenic	novelGene_2811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTGGGGGGGGCTGGTT	NA	False	NA	NA	False	NA	NA	NA	28759487	28759679	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_28759500_28759700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091704	chr2	+	179	1	Intergenic	novelGene_2812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAGGTTCCAGAA	NA	False	NA	NA	False	NA	NA	NA	28937208	28937387	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_28937200_28937400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091714	chr2	+	195	1	Intergenic	novelGene_2813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAAACCCAAGGTGGATG	NA	False	NA	NA	False	NA	NA	NA	28939882	28940077	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_28939900_28940100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091722	chr2	+	191	1	Intergenic	novelGene_2814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGACTGAGACAGTATT	NA	False	NA	NA	False	NA	NA	NA	28949260	28949451	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_28949300_28949500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091729	chr2	+	3948	13	NNC	ENSMUSG00000026803.18	novel	4160	12	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	11.9745099644574	59	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGTGAAATGACTTGAA	NA	False	NA	21	True	AATAAA	-23	NA	28950272	28977668	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_28950316_28954630_28955921_28957014_28957242_28959903_28960090_28961309_28961389_28963900_28964032_28964585_28964821_28969400_28969491_28971023_28971090_28973544_28973631_28974648_28974827_28976118_28976918_28977130
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091751	chr2	+	184	1	Intergenic	novelGene_2815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGAAGAACGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	29057768	29057952	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_29057800_29058000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091755	chr2	+	184	1	Intergenic	novelGene_2816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGGACCATCATGCCCA	NA	False	NA	NA	False	NA	NA	NA	29059689	29059873	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_29059700_29059900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091771	chr2	+	1258	8	FSM	ENSMUSG00000026799.16	ENSMUST00000028139.11	1254	8	-7	3	-7	-3	multi-exon	FALSE	canonical	3	144	junction_3	14.0393034305954	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGCTCTGTGTTCTGCTT	NA	False	NA	29	True	AATAAA	-17	NA	29236823	29414802	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_29237060_29239857_29240003_29303399_29303531_29361304_29361399_29390230_29390339_29399434_29399477_29412785_29412864_29414378
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091780	chr2	+	200	1	Intergenic	novelGene_2817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCAAATGTACGCAAAAGT	NA	False	NA	NA	False	NA	NA	NA	29332032	29332232	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_29332000_29332200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091797	chr2	-	2562	8	FSM	ENSMUSG00000039826.14	ENSMUST00000048044.12	3408	8	850	-4	-4	4	multi-exon	FALSE	canonical	3	126	junction_2	23.9267589931935	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGTGATGTTTTAATTA	NA	False	NA	-2	True	TATAAA	-27	NA	29677664	29666117	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091807	chr2	-	2505	7	FSM	ENSMUSG00000039826.14	ENSMUST00000156846.8	3930	7	-1	1426	-1	0	multi-exon	FALSE	canonical	3	76	junction_4	39.677869566464	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGCATGTGATGTTTTA	NA	False	NA	-6	True	TATAAA	-23	NA	29677673	29666121	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29674964_29675040_29676487_29676620_29677514
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091816	chr2	+	1260	7	FSM	ENSMUSG00000026798.11	ENSMUST00000028137.10	1991	7	-4	735	-4	22	multi-exon	FALSE	canonical	3	105	junction_3	15.3884877605162	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTCCCTTTGCCTGAGG	NA	False	NA	49	True	AATAAA	-39	NA	29678266	29687020	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_29678370_29678448_29678581_29679914_29680012_29680468_29680572_29685392_29685523_29685947_29686042_29686419
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091859	chr2	+	3747	21	NIC	ENSMUSG00000026790.20	novel	403	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	114	junction_1	275.689789437331	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	6640	False	NA	14	True	AATAAA	-14	NA	29779243	29821758	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_29779291_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091861	chr2	+	3690	21	NIC	ENSMUSG00000026790.20	novel	403	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	114	junction_1	276.935913164039	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	6640	False	NA	14	True	AATAAA	-14	NA	29779243	29821758	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_29779291_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091874	chr2	+	3799	21	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	-12	7	combination_of_known_junctions	FALSE	canonical	3	561	junction_4	193.045616370846	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTTGATTTCCCTTATC	7181	False	NA	21	True	AATAAA	-21	NA	29779784	29821765	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091884	chr2	+	7312	19	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	-8	0	intron_retention	FALSE	canonical	3	577	junction_4	163.599188397878	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7185	False	NA	14	True	AATAAA	-14	NA	29779788	29821758	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29816115_29816715_29816842_29820481
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091933	chr2	+	2103	16	NIC	ENSMUSG00000026790.20	novel	2364	17	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	233	junction_2	278.954476572791	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCGTGTTGCACAAAGT	7217	False	NA	13	True	AATAAA	-17	NA	29779820	29812551	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_29779934_29782197_29782289_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091943	chr2	+	4046	22	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	343.861116034049	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7221	False	NA	14	True	AATAAA	-14	NA	29779824	29821758	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_29779934_29780777_29781015_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091944	chr2	+	2156	16	FSM	ENSMUSG00000026790.20	ENSMUST00000113767.8	2249	16	93	0	2	0	multi-exon	FALSE	canonical	3	233	junction_2	277.041625432393	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCGTGTTGCACAAAGT	7221	False	NA	13	True	AATAAA	-17	NA	29779824	29812551	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_29779934_29782197_29782289_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091974	chr2	+	3100	16	FSM	ENSMUSG00000019715.15	ENSMUST00000019859.9	4030	16	-9	939	-9	-939	multi-exon	FALSE	canonical	3	458	junction_9	44.6713430387859	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTTACCTCAATATTTT	NA	False	NA	20	True	AATAAA	-30	NA	29825428	29849444	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091985	chr2	+	8110	55	FSM	ENSMUSG00000057738.15	ENSMUST00000046257.14	7820	55	-290	0	-167	0	multi-exon	TRUE	canonical	3	215	junction_7	89.7303917849273	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	NA	False	NA	21	True	AATAAA	-21	NA	29855404	29921463	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893432_29893685_29893710_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091991	chr2	+	7841	56	FSM	ENSMUSG00000057738.15	ENSMUST00000113717.8	7958	56	117	0	0	0	multi-exon	FALSE	canonical	3	11	junction_36	107.955276935321	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	NA	False	NA	21	True	AATAAA	-21	NA	29855688	29921463	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893432_29893685_29893710_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29904169_29904185_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000091992	chr2	+	7886	56	FSM	ENSMUSG00000057738.15	ENSMUST00000095083.11	7883	56	-3	0	0	0	multi-exon	FALSE	canonical	3	62	junction_22	102.057131949797	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	NA	False	NA	21	True	AATAAA	-21	NA	29855688	29921463	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29891111_29891172_29892242_29892442_29893326_29893432_29893685_29893710_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092017	chr2	+	193	1	Intergenic	novelGene_2818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTATTTATAT	NA	False	NA	NA	False	NA	NA	NA	29945848	29946041	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_29945800_29946000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092044	chr2	+	2125	5	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	246	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6637.28493060227	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGGGTCATTCTCCTTG	NA	False	NA	17	True	AATAAA	-22	NA	29952110	29962587	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_29952293_29958280_29958339_29958971_29959053_29960452_29960600_29960930
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092061	chr2	+	2896	8	FSM	ENSMUSG00000054766.14	ENSMUST00000067996.7	2834	8	-57	-5	-57	5	multi-exon	FALSE	canonical	3	3891	junction_1	4471.27957761808	1450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTCTCCTTGTTTTGTA	NA	False	NA	24	True	AATAAA	-29	NA	29956410	29962594	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092080	chr2	+	3031	22	NIC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	-5	1	combination_of_known_junctions	TRUE	canonical	3	77	junction_7	19.7860437769826	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTGTGTAGTGTCTAGG	1313	False	NA	25	True	AATAAA	-27	NA	29967690	29981035	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_29967812_29969545_29969775_29969937_29970084_29970586_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092085	chr2	+	3567	20	NIC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	-17	1	intron_retention	FALSE	canonical	3	77	junction_6	20.0504902848988	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTGTGTAGTGTCTAGG	1360	False	NA	25	True	AATAAA	-27	NA	29967737	29981035	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_29967812_29969545_29969775_29969937_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092094	chr2	-	1146	5	FSM	ENSMUSG00000015335.17	ENSMUST00000102865.11	1165	5	22	-3	9	3	multi-exon	FALSE	canonical	3	614	junction_1	34.0917878674616	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGACTCTTTCCTGG	NA	False	NA	0	True	ATTAAA	-19	NA	29983638	29980952	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_29981579_29981678_29981846_29981999_29982078_29982416_29982554_29983500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092113	chr2	-	1238	4	FSM	ENSMUSG00000015335.17	ENSMUST00000137001.2	846	4	-7	-385	-7	-2	multi-exon	FALSE	canonical	3	619	junction_3	30.9443945740671	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTGCCGTGGACTCTTT	NA	False	NA	-5	True	ATTAAA	-14	NA	29983635	29980957	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_29981846_29981999_29982078_29982416_29982554_29983500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092135	chr2	+	189	1	Intergenic	novelGene_2819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCAGGGGCATCACCTAT	NA	False	NA	NA	False	NA	NA	NA	30045949	30046138	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_30045900_30046100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092148	chr2	+	193	1	Intergenic	novelGene_2820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCCTGGGCATTTAAGG	NA	False	NA	NA	False	NA	NA	NA	30047907	30048100	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_30047900_30048100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092159	chr2	+	1026	3	FSM	ENSMUSG00000015337.6	ENSMUST00000015481.6	1063	3	13	24	13	-24	multi-exon	FALSE	canonical	3	314	junction_1	35	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGACCATCTCTACTCC	NA	False	NA	10	True	ATTAAA	-22	NA	30061517	30064057	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_30062079_30062853_30062964_30063702
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092168	chr2	-	1854	12	FSM	ENSMUSG00000039660.17	ENSMUST00000100220.5	1805	12	-20	-29	-11	11	multi-exon	FALSE	canonical	3	299	junction_5	38.9436974393538	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACGTGACTGTAACCT	NA	False	NA	1	True	AATAAA	-44	NA	30068482	30063453	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066004_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604_30067734_30067931_30067978_30068401
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092181	chr2	-	185	1	Intergenic	novelGene_2821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAAGAATAAAGTCTGGA	NA	False	NA	NA	False	NA	NA	NA	30069077	30068892	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_30068900_30069100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092182	chr2	-	1710	12	ISM	ENSMUSG00000039648.15	ENSMUST00000113661.10	2057	13	4198	-7	-49	0	3prime_fragment	FALSE	canonical	3	127	junction_6	13.3880420309128	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCAGCTTCTCTCTTCCTTT	9487	False	NA	-3	True	AATAAA	-25	NA	30084173	30075135	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092186	chr2	-	2046	14	FSM	ENSMUSG00000039648.15	ENSMUST00000113663.9	2026	14	-13	-7	2	0	multi-exon	FALSE	canonical	3	14	junction_13	49.789616559678	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCAGCTTCTCTCTTCCTTT	NA	False	NA	-3	True	AATAAA	-25	NA	30095826	30075135	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065_30084125_30087968_30088172_30095644
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092208	chr2	+	209	1	Intergenic	novelGene_2822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATAAAATAAGAGGCTG	NA	False	NA	NA	False	NA	NA	NA	30091508	30091717	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_30091500_30091700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092249	chr2	+	5697	44	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-7	-3	at_least_one_novel_splicesite	TRUE	canonical	3	16	junction_34	202.897936761374	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGTCATGTGGCAACT	4861	False	NA	15	True	ATTAAA	-16	NA	30176421	30234275	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229507_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092265	chr2	+	5793	43	ISM	ENSMUSG00000052533.15	ENSMUST00000064447.12	5710	44	25	3	-2	-3	intron_retention	FALSE	canonical	3	896	junction_14	102.517959269531	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGTCATGTGGCAACT	4873	False	NA	15	True	ATTAAA	-16	NA	30176433	30234275	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092295	chr2	+	3358	16	FSM	ENSMUSG00000026858.19	ENSMUST00000077977.14	3381	16	21	2	0	0	multi-exon	TRUE	canonical	3	32	junction_1	8.28385310240484	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTCTGTGTCTTGCTGG	NA	False	NA	4	True	GATAAA	-14	NA	30254265	30275531	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_30254318_30257563_30257800_30258888_30259100_30260306_30260420_30261126_30261245_30261544_30261682_30265684_30265803_30266657_30266759_30267490_30267607_30267982_30268056_30268185_30268273_30271649_30271749_30271950_30272086_30272977_30273032_30273601_30273719_30273940
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092304	chr2	+	198	1	Intergenic	novelGene_2823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGTCACATATGAACACA	NA	False	NA	NA	False	NA	NA	NA	30279874	30280072	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_30279900_30280100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092311	chr2	+	2096	8	FSM	ENSMUSG00000026856.15	ENSMUST00000028209.15	2251	8	155	0	-7	0	multi-exon	FALSE	canonical	3	287	junction_6	27.7995742149158	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGCATACATTACTTG	NA	False	NA	9	True	AATAAA	-16	NA	30282420	30290541	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_30282525_30285670_30285772_30285988_30286074_30286164_30286265_30286443_30286543_30287030_30287160_30287479_30287570_30289153
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092319	chr2	+	2275	9	NNC	ENSMUSG00000026856.15	novel	2294	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	141.368700124886	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTGAGCATACATTACT	NA	False	NA	7	True	AATAAA	-14	NA	30282441	30290539	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_30282525_30283663_30283866_30285670_30285772_30285988_30286074_30286164_30286265_30286443_30286543_30287030_30287160_30287479_30287570_30289153
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092339	chr2	+	2585	10	FSM	ENSMUSG00000039515.12	ENSMUST00000042055.10	2586	10	2	-1	2	0	multi-exon	TRUE	canonical	3	440	junction_4	51.3501655905104	280	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTGAGACATCTTTT	NA	False	NA	18	True	ATTAAA	-21	NA	30306052	30337818	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_30306345_30316410_30316509_30318327_30318415_30321972_30322099_30325575_30325694_30327581_30327682_30328240_30328366_30329675_30329777_30333301_30333410_30336388
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092348	chr2	+	198	1	Intergenic	novelGene_2824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGAGAAACCCAGAGGAAA	NA	False	NA	NA	False	NA	NA	NA	30349552	30349750	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_30349600_30349800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092350	chr2	-	2689	1	FSM	ENSMUSG00000089762.4	ENSMUST00000065134.4	2683	1	-3	-3	-3	3	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGGTGGTTCCTTTGCT	NA	False	NA	-2	True	AATAAA	-16	NA	30364234	30361545	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_30361500_30364200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092359	chr2	-	206	1	Intergenic	novelGene_2825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTATAACTATCAGCACCA	2842	False	NA	NA	False	NA	NA	NA	30592067	30591861	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_30591900_30592100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092370	chr2	+	1272	4	FSM	ENSMUSG00000026857.10	ENSMUST00000041830.10	1387	4	115	0	0	0	multi-exon	FALSE	canonical	3	480	junction_2	33.3466640010661	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTGTGGATGTATGT	NA	False	NA	27	True	AATAAA	-33	NA	30697952	30713045	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_30698096_30709640_30709845_30710460_30710714_30712373
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092382	chr2	-	2100	6	FSM	ENSMUSG00000039483.11	ENSMUST00000041726.4	4147	6	2048	-1	6	1	multi-exon	FALSE	canonical	3	80	junction_2	13.3356664625357	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTCTTTGTATGACAA	1730	False	NA	-18	True	ATTAAA	-20	NA	30718297	30713107	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_30714517_30714652_30714740_30715463_30715573_30715666_30715774_30716934_30717111_30718085
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092396	chr2	-	1302	3	FSM	ENSMUSG00000050737.14	ENSMUST00000102852.6	3647	3	36	2309	36	502	multi-exon	FALSE	canonical	3	78	junction_1	10.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCGGTGTCTAAGACCCA	8447	False	NA	NA	False	ATTAAA	-22	NA	30793273	30781791	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_30782839_30790878_30790962_30793101
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092402	chr2	+	172	1	Intergenic	novelGene_2826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAGAATAATGTTCTCA	NA	False	NA	NA	False	NA	NA	NA	30790419	30790591	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_30790400_30790600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092410	chr2	+	3035	5	FSM	ENSMUSG00000026848.15	ENSMUST00000028199.12	3039	5	4	0	4	0	multi-exon	FALSE	canonical	1	21	junction_2	34.4990941910074	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTGAGCTTTTCCTTG	NA	False	NA	13	True	AATAAA	-18	NA	30842974	30849027	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_30843236_30843763_30844030_30845789_30845966_30846459_30846588_30846823
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092416	chr2	+	3039	5	NIC	ENSMUSG00000026848.15	novel	3039	5	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	43.5918570377542	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTGAGCTTTTCCTTG	NA	False	NA	13	True	AATAAA	-18	NA	30842980	30849027	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_30843236_30843763_30844030_30845779_30845966_30846459_30846588_30846823
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092438	chr2	+	254	1	Intergenic	novelGene_2827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATAGCCTAAAAGTCAGAT	NA	False	NA	NA	False	NA	NA	NA	30861762	30862016	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_30861800_30862000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092444	chr2	-	1603	9	FSM	ENSMUSG00000026851.10	ENSMUST00000028205.10	1984	9	-274	655	-14	-655	multi-exon	FALSE	canonical	3	349	junction_7	16.1240309786356	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCTTCTAATGTTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	30872227	30862843	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902_30866101_30867903_30867982_30868906_30868978_30870010_30870063_30871494_30871555_30871789
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092456	chr2	-	2720	8	NIC	ENSMUSG00000026851.10	novel	1984	9	NA	NA	37	-659	intron_retention	FALSE	canonical	3	354	junction_3	15.6973935182025	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCCTGTCTTCTAATGT	NA	False	NA	NA	False	ATTAAA	-14	NA	30871916	30862847	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902_30866101_30867903_30867982_30868906_30868978_30870010_30871555_30871789
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092462	chr2	+	4057	25	FSM	ENSMUSG00000026854.17	ENSMUST00000102849.11	5088	25	90	941	6	-937	multi-exon	TRUE	canonical	1	7	junction_21	9.09889721645187	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTACTGTGACACTGTG	NA	False	NA	24	True	AATAAA	-24	NA	30872380	30912657	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_30872411_30886059_30886160_30888784_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177_30900626_30900990_30901135_30901392_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092479	chr2	+	120	1	Intergenic	novelGene_2828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGGCAAGGGCTCTGAAC	5722	False	NA	NA	False	NA	NA	NA	30935750	30935870	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_30935800_30935900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092492	chr2	+	177	1	Intergenic	novelGene_2829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTTAAAAAAAGAAAGAAA	703	False	NA	NA	False	NA	NA	NA	30953688	30953865	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_30953700_30953900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092497	chr2	-	190	1	Intergenic	novelGene_2830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATGTAGATTTAATTT	NA	False	NA	NA	False	NA	NA	NA	30988010	30987820	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_30987800_30988000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092507	chr2	+	206	1	Intergenic	novelGene_2831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGCGCTACCATGCCCC	6110	False	NA	NA	False	NA	NA	NA	30988473	30988679	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_30988500_30988700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092528	chr2	-	181	1	Intergenic	novelGene_2832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGCAATCTGGAACCCCA	NA	False	NA	NA	False	NA	NA	NA	31089872	31089691	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_31089700_31089900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092532	chr2	+	191	1	Intergenic	novelGene_2833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATTCAAACCACCACACT	NA	False	NA	NA	False	NA	NA	NA	31118884	31119075	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_31118900_31119100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092568	chr2	+	208	1	Intergenic	novelGene_2834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCTAGGAGTCAATTAGT	NA	False	NA	NA	False	NA	NA	NA	31421595	31421803	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_31421600_31421800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092571	chr2	+	174	1	Intergenic	novelGene_2835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGGACCTAGGTTCAATT	NA	False	NA	NA	False	NA	NA	NA	31442800	31442974	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_31442800_31443000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092579	chr2	+	3261	19	FSM	ENSMUSG00000026843.16	ENSMUST00000113482.8	3268	19	7	0	7	0	multi-exon	TRUE	canonical	3	465	junction_18	67.3624112131124	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTTTTGTTTGCTGGCC	500	False	NA	36	True	AATAAA	-37	NA	31462669	31507538	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092612	chr2	-	184	1	Intergenic	novelGene_2836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAGTGGCTGGAATG	8880	False	NA	NA	False	NA	NA	NA	31472320	31472136	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_31472100_31472300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092614	chr2	+	178	1	Intergenic	novelGene_2837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAGAGAGAGAGAGAGA	977	False	NA	NA	False	NA	NA	NA	31477841	31478019	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_31477800_31478000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092617	chr2	+	1923	9	FSM	ENSMUSG00000039356.16	ENSMUST00000038474.14	1686	9	-7	-230	-7	230	multi-exon	FALSE	canonical	3	842	junction_6	46.6797600679352	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGTTTCTGATGCTCTG	NA	False	NA	NA	False	AATAAA	-14	NA	31560719	31571591	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_31560874_31562483_31562586_31564526_31564573_31564706_31564797_31565850_31565917_31566679_31566749_31568462_31568640_31569862_31569992_31570501
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092626	chr2	+	194	1	ISM	ENSMUSG00000039356.16	ENSMUST00000038474.14	1686	9	10417	24	2848	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAATAAAGGGAGGTAGCA	NA	False	NA	NA	False	NA	NA	NA	31571143	31571337	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_+_31571100_31571300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092640	chr2	-	243	1	Intergenic	novelGene_2838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCAGATACAAGCTCCGT	NA	False	NA	NA	False	AATGAA	-38	NA	31597395	31597152	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_31597200_31597400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092653	chr2	-	187	1	Intergenic	novelGene_2839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTATTTATTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	31621866	31621679	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_31621700_31621900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092659	chr2	+	195	1	Intergenic	novelGene_2840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCCAGACCCAGGGAAGG	NA	False	NA	NA	False	NA	NA	NA	31638602	31638797	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_31638600_31638800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092666	chr2	+	5108	11	FSM	ENSMUSG00000026842.17	ENSMUST00000028190.13	5794	11	0	686	0	0	multi-exon	FALSE	canonical	3	93	junction_1	30.1131200641846	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCTTGGTCTGTGATTC	NA	False	NA	20	True	AATAAA	-21	NA	31649954	31693553	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_31650128_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092675	chr2	+	249	1	Intergenic	novelGene_2841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTCCTTATAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	31799132	31799381	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_31799100_31799400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092704	chr2	+	221	1	Intergenic	novelGene_2842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGTATGATCCCAGCAT	NA	False	NA	NA	False	NA	NA	NA	31919243	31919464	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_31919200_31919500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092707	chr2	+	189	1	Intergenic	novelGene_2843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTTCAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	31931800	31931989	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_31931800_31932000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092712	chr2	-	190	1	Intergenic	novelGene_2844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAAGCTTTCTCTGGGCA	NA	False	NA	NA	False	NA	NA	NA	31944439	31944249	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_31944200_31944400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092719	chr2	+	200	1	Intergenic	novelGene_2845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGCTCAGTGGTTAAAGG	720	False	NA	NA	False	NA	NA	NA	31966403	31966603	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_31966400_31966600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092731	chr2	+	183	1	Intergenic	novelGene_2846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAGAGCTCAGAGGCAG	5579	False	NA	NA	False	NA	NA	NA	31971262	31971445	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_31971300_31971400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092739	chr2	+	173	1	Intergenic	novelGene_2847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATAAAAACAAGGGC	NA	False	NA	NA	False	NA	NA	NA	32034184	32034357	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_32034200_32034400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092751	chr2	+	8600	30	NIC	ENSMUSG00000039262.17	novel	8612	30	NA	NA	9	0	combination_of_known_junctions	TRUE	canonical	3	283	junction_29	60.7166476024171	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGTCGGTTTTCTATC	6659	False	NA	24	True	AATAAA	-40	NA	32041102	32124549	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092766	chr2	+	2870	20	FSM	ENSMUSG00000039254.17	ENSMUST00000036473.16	2918	20	48	0	-5	0	multi-exon	FALSE	canonical	3	126	junction_15	17.3977423950124	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATGTTATTTATTGA	NA	False	NA	17	True	AATAAA	-18	NA	32126649	32145017	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092773	chr2	+	2743	19	NIC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_11	38.3467367871403	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATGTTATTTATTGA	NA	False	NA	17	True	AATAAA	-18	NA	32126683	32145017	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092778	chr2	+	2911	20	NNC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	34.216031945643	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATGTTATTTATTGA	NA	False	NA	17	True	AATAAA	-18	NA	32126683	32145017	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_32126829_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092787	chr2	+	196	1	Intergenic	novelGene_2848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAATAACAGTTCAGTT	NA	False	NA	NA	False	NA	NA	NA	32130181	32130377	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_32130200_32130400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092796	chr2	-	1942	7	FSM	ENSMUSG00000002550.17	ENSMUST00000002625.15	2005	7	63	0	-35	0	multi-exon	FALSE	canonical	3	135	junction_2	20.9741904889478	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTGTCCTGTTTTATTT	NA	False	NA	NA	False	AATAAA	-17	NA	32150108	32145013	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_32146224_32146629_32146679_32148101_32148197_32148288_32148432_32148582_32148680_32149591_32149752_32149920
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092820	chr2	-	2308	4	NIC	ENSMUSG00000044627.12	novel	768	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	3426	junction_2	83.7947227190087	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	False	NA	-12	True	AATAAA	-14	NA	32178043	32168827	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_32170816_32171697_32171823_32177608_32177658_32177897
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092826	chr2	+	4357	26	FSM	ENSMUSG00000002546.18	ENSMUST00000239447.2	4361	26	-3	7	-3	1	multi-exon	FALSE	canonical	3	80	junction_7	19.1852443299532	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGCCTAGGGTGTTCG	NA	False	NA	23	True	AATAAA	-16	NA	32178261	32197926	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32187765_32187847_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092827	chr2	+	4275	25	NIC	ENSMUSG00000002546.18	novel	4361	26	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_6	28.9025842270203	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGGCCTAGGGTGTTC	NA	False	NA	22	True	AATAAA	-15	NA	32178261	32197925	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092861	chr2	+	1615	7	FSM	ENSMUSG00000026820.6	ENSMUST00000028162.5	4978	7	331	3032	-213	1164	multi-exon	FALSE	canonical	3	184	junction_6	7.22649446289293	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTGACAATGGTGCT	7423	False	NA	20	True	AATAAA	-20	NA	32286238	32292752	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_32286563_32287549_32287748_32290061_32290121_32290414_32290565_32290889_32291091_32291498_32291617_32292187
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092870	chr2	-	3284	10	FSM	ENSMUSG00000026819.16	ENSMUST00000113310.9	3278	10	-3	-3	-3	0	multi-exon	FALSE	canonical	3	77	junction_4	7.53919797941661	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGAGCCAGGGTTTTTC	8150	False	NA	-6	True	AATAAA	-17	NA	32341460	32304498	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32311314_32311403_32311484_32311612_32341078
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092883	chr2	+	195	1	Intergenic	novelGene_2849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTCATAAGCTTTAACT	NA	False	NA	NA	False	NA	NA	NA	32352502	32352697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_32352500_32352700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092890	chr2	+	220	1	Intergenic	novelGene_2850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGAGAGAGATAGGGT	NA	False	NA	NA	False	TATAAA	-10	NA	32356874	32357094	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_32356900_32357100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092894	chr2	+	204	1	Intergenic	novelGene_2851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTCTGGATTTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	32358823	32359027	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_32358800_32359000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092914	chr2	+	873	4	FSM	ENSMUSG00000026810.13	ENSMUST00000028151.7	869	4	-11	7	-11	-7	multi-exon	FALSE	canonical	3	274	junction_1	58.5965490072202	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTCTCTGCCATCCT	4762	False	NA	16	True	AATAAA	-17	NA	32460858	32463584	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_32460925_32461217_32461308_32462308_32462412_32462970
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092944	chr2	+	2267	5	NIC	ENSMUSG00000026811.19	novel	2394	7	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	26.3569250862084	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTCTGTGTCTTTA	3350	False	NA	7	True	AATAAA	-16	NA	32497018	32510818	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_32497124_32502235_32502416_32504792_32505200_32508508_32508617_32509351
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092951	chr2	+	2017	7	FSM	ENSMUSG00000026817.15	ENSMUST00000113277.8	2063	7	50	-4	49	0	multi-exon	FALSE	canonical	3	40	junction_1	98.788775790685	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGAGTGTATTGAAACA	NA	False	NA	17	True	AATAAA	-21	NA	32515498	32525070	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_32515551_32518462_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092957	chr2	+	2017	6	ISM	ENSMUSG00000026817.15	ENSMUST00000113277.8	2063	7	2962	-4	9	0	3prime_fragment	FALSE	canonical	3	200	junction_1	44.5268458348444	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGAGTGTATTGAAACA	NA	False	NA	17	True	AATAAA	-21	NA	32518410	32525070	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_+_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092965	chr2	+	2062	6	FSM	ENSMUSG00000026817.15	ENSMUST00000068271.5	2034	6	-22	-6	-22	0	multi-exon	FALSE	canonical	3	94	junction_1	85.0895998345274	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGAGTGTATTGAAACA	NA	False	NA	17	True	AATAAA	-21	NA	32519493	32525070	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_32519629_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092975	chr2	+	1999	5	ISM	ENSMUSG00000026817.15	ENSMUST00000068271.5	2034	6	273	-6	256	0	3prime_fragment	FALSE	canonical	3	270	junction_4	19.9374020373769	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGAGTGTATTGAAACA	NA	False	NA	17	True	AATAAA	-21	NA	32519788	32525070	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_+_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092980	chr2	+	184	1	Intergenic	novelGene_2852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAATTATAGAGATC	3739	False	NA	NA	False	NA	NA	NA	32528764	32528948	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_32528800_32528900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000092986	chr2	+	3491	15	FSM	ENSMUSG00000026814.17	ENSMUST00000009705.14	3422	15	-68	-1	-68	1	multi-exon	FALSE	canonical	3	154	junction_1	26.1475405640955	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGCTTCAATTAGTTCC	487	False	NA	NA	False	AATAAA	-14	NA	32536538	32572671	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_32537037_32547527_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32567974_32568467_32568585_32568902_32569155_32570292_32570348_32571207_32571310_32571448
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093011	chr2	-	175	1	Intergenic	novelGene_2853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGTTGCTAGCCGGGCG	NA	False	NA	NA	False	NA	NA	NA	32547386	32547211	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_32547200_32547400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093025	chr2	-	3858	7	FSM	ENSMUSG00000105841.3_ENSMUSG00000009555.17_ENSMUSG00000093280.3	ENSMUST00000009699.16	1733	7	-453	-1672	-161	18	multi-exon	FALSE	canonical	3	1063	junction_2	88.3259430870807	586	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGGCCTGGGGAGATGG	NA	False	NA	NA	False	NA	NA	NA	32603249	32595777	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_32598302_32599478_32599628_32599784_32599957_32600054_32600222_32600488_32600580_32602042_32602125_32602576
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093037	chr2	-	1865	6	NIC	ENSMUSG00000009555.17	novel	1733	7	NA	NA	-2	0	intron_retention	FALSE	canonical	3	1092	junction_4	84.0514128376198	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCGTTTCCTGTGTTC	NA	False	NA	NA	False	ATTAAA	-25	NA	32602771	32597449	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_32598302_32599478_32599957_32600054_32600222_32600488_32600580_32602042_32602125_32602576
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093044	chr2	-	190	1	Intergenic	novelGene_2854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAACAATTAAAGTTACAGA	NA	False	NA	NA	False	NA	NA	NA	32606323	32606133	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_32606100_32606300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093051	chr2	+	1546	5	FSM	ENSMUSG00000009563.17	ENSMUST00000009707.14	1536	5	-4	-6	-4	6	multi-exon	FALSE	canonical	3	200	junction_1	20.9105236663265	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGTTTCTTACTGTCCT	585	False	NA	15	True	AATAAA	-26	NA	32647241	32652262	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_32647463_32648682_32648949_32649538_32649715_32650600_32650729_32651507
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093064	chr2	+	952	5	FSM	ENSMUSG00000053746.9	ENSMUST00000066352.6	952	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	3.34477204006491	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAAGCTTCCTGTGGGGT	8191	False	NA	6	True	ATTAAA	-16	NA	32665797	32667609	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_32665908_32666315_32666536_32666718_32666819_32666994_32667041_32667133
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093069	chr2	-	3569	19	FSM	ENSMUSG00000026797.17	ENSMUST00000050000.16	3892	19	-36	359	-36	0	multi-exon	FALSE	canonical	3	22	junction_3	6.44827472379863	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGGTGCCTGGGCCCAC	5113	False	NA	-23	True	AATAAA	-15	NA	32737293	32677972	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_32679650_32686027_32686183_32688116_32688203_32690591_32690694_32691831_32691942_32692765_32692905_32696080_32696162_32696732_32696799_32698013_32698075_32699112_32699221_32701116_32701248_32702032_32702118_32704890_32705040_32707297_32707402_32708438_32708518_32709845_32709923_32711846_32711929_32713547_32713598_32737066
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093084	chr2	-	187	1	Intergenic	novelGene_2855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	332	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCCAGAGGTGGTGTATA	NA	False	NA	NA	False	NA	NA	NA	32743906	32743719	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_32743700_32743900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093086	chr2	+	3718	14	FSM	ENSMUSG00000026796.17	ENSMUST00000028135.15	3714	14	-4	0	-4	0	multi-exon	TRUE	canonical	3	292	junction_12	30.0169577319103	252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCATGTGCTGCTGGG	8853	False	NA	19	True	AATAAA	-19	NA	32766121	32815266	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_32766417_32795780_32795912_32799860_32799990_32801352_32801459_32802431_32802600_32809004_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093096	chr2	-	187	1	Intergenic	novelGene_2856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTCAAAAGTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32800273	32800086	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_32800100_32800300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093111	chr2	+	679	7	FSM	ENSMUSG00000038900.18	ENSMUST00000126610.2	1242	7	112	451	-49	0	multi-exon	FALSE	canonical	3	2580	junction_6	1457.06650690885	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5753	False	NA	24	True	AATAAA	-23	NA	32851682	32854057	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093121	chr2	+	758	7	FSM	ENSMUSG00000038900.18	ENSMUST00000102811.10	729	7	-27	-2	-7	0	multi-exon	FALSE	canonical	3	310	junction_1	2477.85254246943	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5795	False	NA	24	True	AATAAA	-23	NA	32851724	32854057	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_32851973_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093131	chr2	-	2111	10	FSM	ENSMUSG00000026791.15	ENSMUST00000028129.13	2108	10	9	-12	-2	12	multi-exon	FALSE	canonical	3	167	junction_4	8.32666399786453	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCAGAAGTCTTTTGCAG	3959	False	NA	-1	True	AATAAA	-27	NA	32872085	32862989	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_32863745_32864849_32864996_32865325_32865497_32865931_32866041_32866148_32866293_32866872_32867073_32870013_32870114_32871372_32871580_32871732_32871896_32871969
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093163	chr2	-	186	1	FSM	ENSMUSG00000104277.2	ENSMUST00000193214.2	3789	1	2486	1117	2486	-1117	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTACATTGCAGATGTAAT	NA	False	NA	0	True	NA	NA	NA	32889841	32889655	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_32889700_32889800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093172	chr2	+	190	1	Intergenic	novelGene_2857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCACACATACTTTACTAC	2216	False	NA	NA	False	NA	NA	NA	32926732	32926922	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_32926700_32926900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093179	chr2	+	201	1	Intergenic	novelGene_2858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTTTTAGAGGCTGGAG	NA	False	NA	NA	False	TTTAAA	-3	NA	33042050	33042251	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_33042000_33042300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093182	chr2	+	193	1	Intergenic	novelGene_2859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTAAAAAGAAGTTC	NA	False	NA	NA	False	NA	NA	NA	33268685	33268878	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_33268700_33268900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093194	chr2	+	195	1	Intergenic	novelGene_2860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGATTCCACTTTTCAGGG	NA	False	NA	NA	False	NA	NA	NA	33282447	33282642	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_33282400_33282600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093197	chr2	+	194	1	Intergenic	novelGene_2861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGCTTCTGAGATGGAG	NA	False	NA	NA	False	NA	NA	NA	33295531	33295725	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_33295500_33295700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093208	chr2	-	6507	2	FSM	ENSMUSG00000068966.11	ENSMUST00000134589.2	664	2	-33	-5810	-26	-1	multi-exon	FALSE	canonical	3	85	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGCTGTGGTCTCTGTGT	NA	False	NA	-1	True	AATAAA	-17	NA	33321362	33296120	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_33302508_33321242
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093248	chr2	+	198	1	Intergenic	novelGene_2862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTTCCTTCAGTGCTG	NA	False	NA	NA	False	NA	NA	NA	33369855	33370053	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_33369900_33370100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093259	chr2	+	214	1	Intergenic	novelGene_2863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATACATAAATCTCA	NA	False	NA	NA	False	NA	NA	NA	33753816	33754030	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_33753800_33754000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093264	chr2	-	183	1	Intergenic	novelGene_2864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAGAGAGAGAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	33876188	33876005	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_33876000_33876200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093271	chr2	+	201	1	Intergenic	novelGene_2865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTGTGATACAGATTTAAA	NA	False	NA	NA	False	NA	NA	NA	34191148	34191349	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_34191100_34191300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093281	chr2	+	3442	12	FSM	ENSMUSG00000038696.15	ENSMUST00000147337.8	3111	12	-328	-3	-7	2	multi-exon	FALSE	canonical	3	190	junction_6	16.5988150527989	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTATATTGCTTTGAAT	NA	False	NA	NA	False	AATAAA	-17	NA	34296866	34514964	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_34297267_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093298	chr2	+	185	1	Intergenic	novelGene_2866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGCAAGTACAGAAGTCAGA	NA	False	NA	NA	False	NA	NA	NA	34483329	34483514	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_34483300_34483500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093301	chr2	+	241	1	Intergenic	novelGene_2867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTTGATGTTGTTGTT	NA	False	NA	NA	False	NA	NA	NA	34500726	34500967	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_34500700_34501000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093326	chr2	+	186	1	Intergenic	novelGene_2868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGTTAGAATGCTCTGGG	NA	False	NA	NA	False	NA	NA	NA	34581491	34581677	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_34581500_34581700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093331	chr2	+	192	1	Intergenic	novelGene_2869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTGTTCTAATTTTTAT	8984	False	NA	NA	False	NA	NA	NA	34598637	34598829	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_34598600_34598800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093334	chr2	+	155	1	Intergenic	novelGene_2870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAACGTATTGTTTGGG	5102	False	NA	NA	False	NA	NA	NA	34613617	34613772	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_34613600_34613800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093350	chr2	+	245	1	Intergenic	novelGene_2871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTTCCTTCCTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	34634167	34634412	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_34634200_34634400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093355	chr2	+	205	1	Intergenic	novelGene_2872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCATCAGATTCTCTGG	NA	False	NA	NA	False	NA	NA	NA	34634743	34634948	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_34634700_34634900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093363	chr2	+	191	1	Intergenic	novelGene_2873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTCCATCTCTGGAAAG	NA	False	NA	NA	False	NA	NA	NA	34639137	34639328	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_34639100_34639300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093369	chr2	+	180	1	Intergenic	novelGene_2874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACAAACTTTTCCCACCT	NA	False	NA	NA	False	NA	NA	NA	34656945	34657125	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_34656900_34657100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093375	chr2	+	2576	9	FSM	ENSMUSG00000026864.14	ENSMUST00000028222.13	3672	9	80	1016	-45	0	multi-exon	FALSE	canonical	3	1920	junction_1	305.196632312678	1875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCAGGTGTGTCTTTCTT	NA	False	NA	18	True	ACTAAA	-14	NA	34662061	34666543	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_34662159_34662240_34662459_34662570_34662803_34663181_34663320_34663832_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093384	chr2	+	2620	8	FSM	ENSMUSG00000026864.14	ENSMUST00000100171.3	2613	8	-4	-3	-4	3	multi-exon	FALSE	canonical	3	2314	junction_3	220.40537791135	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGTGTGTCTTTCTTCGG	NA	False	NA	21	True	ACTAAA	-17	NA	34662102	34666546	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_34662459_34662570_34662803_34663181_34663320_34663832_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093396	chr2	-	2509	8	FSM	ENSMUSG00000070953.14	ENSMUST00000145903.8	2968	8	123	336	-35	-336	multi-exon	FALSE	canonical	3	258	junction_7	62.9123134503371	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCTTCCATTATTTGGT	2760	False	NA	0	True	AATAAA	-18	NA	34689801	34667903	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689762
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093419	chr2	+	190	1	Intergenic	novelGene_2875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAGGCAGGTGGATCTCT	NA	False	NA	NA	False	NA	NA	NA	34682330	34682520	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_34682300_34682500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093425	chr2	-	221	1	Intergenic	novelGene_2876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGTTTGTTTGAGTCAT	691	False	NA	1	True	AAAACA	-15	NA	34691870	34691649	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_34691600_34691900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093434	chr2	-	1821	8	FSM	ENSMUSG00000035949.16	ENSMUST00000091020.10	1838	8	18	-1	0	0	multi-exon	FALSE	canonical	3	82	junction_6	107.582336764329	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTTCTTTGAAATTG	9214	False	NA	-3	True	ATTAAA	-15	NA	34716229	34695349	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34712988_34715973_34716083_34716183
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093442	chr2	-	1913	8	FSM	ENSMUSG00000035949.16	ENSMUST00000113080.9	1923	8	13	-3	0	0	multi-exon	FALSE	canonical	3	239	junction_7	72.0294724259395	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTTCTTTGAAATTG	9214	False	NA	-3	True	ATTAAA	-15	NA	34716229	34695349	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34713080_34715973_34716083_34716183
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093453	chr2	-	2515	4	FSM	ENSMUSG00000035949.16	ENSMUST00000131534.8	1930	4	94	-679	0	679	multi-exon	FALSE	canonical	3	239	junction_3	100.641277151409	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACAGTGAAGCGTGTTTT	9214	False	NA	1	True	AATAAA	-25	NA	34716229	34701171	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_34703022_34712569_34713080_34715973_34716083_34716183
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093464	chr2	+	190	1	Intergenic	novelGene_2877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATAAACTGCAAAACATA	NA	False	NA	NA	False	NA	NA	NA	34708863	34709053	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_34708900_34709100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093473	chr2	-	239	1	Intergenic	novelGene_2878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTTTCTTTCCAAGCTT	NA	False	NA	NA	False	AAAAAG	-35	NA	34710695	34710456	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_34710500_34710700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093491	chr2	-	1975	10	NNC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_6	175.514974212571	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCGTTGGTATTCCGGC	NA	False	NA	-12	True	AATAAA	-16	NA	34760949	34742111	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753548_34755538_34755668_34755993_34756108_34756904_34757050_34760761
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093493	chr2	-	1863	9	NIC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	-6	2	combination_of_known_splicesites	FALSE	canonical	3	104	junction_8	158.265945089271	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCGTTGGTATTCCGGC	NA	False	NA	-12	True	AATAAA	-16	NA	34760951	34742111	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34760761
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093507	chr2	+	187	1	Intergenic	novelGene_2879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCCTTCTGTCCCTCT	NA	False	NA	NA	False	NA	NA	NA	34870606	34870793	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_34870600_34870800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093514	chr2	-	189	1	Intergenic	novelGene_2880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATATATAAAACTGGGTG	NA	False	NA	NA	False	TTTAAA	-1	NA	34970023	34969834	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_34969800_34970000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093555	chr2	-	2813	7	FSM	ENSMUSG00000026880.12	ENSMUST00000028241.7	2787	7	-25	-1	-25	1	multi-exon	FALSE	canonical	3	37	junction_2	5.5876848714134	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGAGTCTTGTTTCTG	NA	False	NA	1	True	AATAAA	-21	NA	35227013	35203996	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_35206068_35210342_35210478_35211494_35211699_35213675_35213759_35215325_35215399_35216432_35216537_35226870
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093563	chr2	-	3380	8	NIC	ENSMUSG00000035778.18	novel	3391	8	NA	NA	75	-2	combination_of_known_junctions	FALSE	canonical	3	25	junction_7	27.4531140198659	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGGTCTGGTATGGAT	1240	False	NA	-1	True	AATAAA	-15	NA	35335770	35290192	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35312191_35312281_35313243_35313425_35322525_35322645_35335707
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093564	chr2	-	3378	8	FSM	ENSMUSG00000035778.18	ENSMUST00000113002.9	3391	8	11	2	-6	-2	multi-exon	FALSE	canonical	3	26	junction_7	27.2381784880513	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGGTCTGGTATGGAT	NA	False	NA	-1	True	AATAAA	-15	NA	35351267	35290192	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35312191_35312281_35313243_35313425_35322525_35322645_35351206
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093583	chr2	-	255	1	Intergenic	novelGene_2881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCCAGATATTGGACGTT	NA	False	NA	NA	False	NA	NA	NA	35377798	35377543	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_35377500_35377800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093600	chr2	+	209	1	Intergenic	novelGene_2882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTGCATTTGAACATG	NA	False	NA	NA	False	NA	NA	NA	35520938	35521147	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_35520900_35521100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093632	chr2	-	807	4	FSM	ENSMUSG00000026895.8	ENSMUST00000070112.6	861	4	54	0	54	0	multi-exon	FALSE	canonical	3	1222	junction_2	59.9184631163235	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTGTTTTATTATGCT	NA	False	NA	-1	True	ATTAAA	-15	NA	35939364	35926337	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_35926654_35929723_35929890_35934361_35934526_35939203
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093643	chr2	-	2469	6	FSM	ENSMUSG00000026889.13	ENSMUST00000028251.10	2617	6	148	0	-10	0	multi-exon	FALSE	canonical	3	240	junction_3	16.6300932047899	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTGGTCTTATTGTCT	NA	False	NA	-23	True	AATAAA	-16	NA	36026637	36006090	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_36007987_36010824_36010911_36012863_36012951_36017136_36017264_36024146_36024276_36026493
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093659	chr2	-	2818	4	FSM	ENSMUSG00000009030.15	ENSMUST00000009174.15	2858	4	41	-1	-38	1	multi-exon	FALSE	canonical	3	157	junction_1	14.3527000944073	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGTATATTAGATATTTG	NA	False	NA	-6	True	AATAAA	-21	NA	37249303	37240084	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_37242395_37245647_37245830_37247215_37247393_37249154
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093678	chr2	-	5316	2	FSM	ENSMUSG00000050714.10	ENSMUST00000067043.5	5267	2	-49	0	-35	0	multi-exon	FALSE	canonical	3	22	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGTGTCATTGACTTC	NA	False	NA	2	True	AATAAA	-14	NA	37333182	37322179	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_37327012_37332698
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093688	chr2	+	4827	26	NIC	ENSMUSG00000035437.16	novel	4967	26	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	49.1926823826471	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTGCTTCATACAAAAGT	1545	False	NA	6	True	ATTAAA	-17	NA	37333296	37456448	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_37333469_37359527_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093697	chr2	+	4877	26	FSM	ENSMUSG00000035437.16	ENSMUST00000112920.2	4847	26	-45	15	-23	2	multi-exon	FALSE	canonical	3	120	junction_1	33.7498088883478	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCTTCATACAAAAGTAGT	NA	False	NA	9	True	ATTAAA	-20	NA	37342233	37456451	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_37342314_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093713	chr2	+	208	1	Intergenic	novelGene_2883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAGTAATATGCTGTCT	NA	False	NA	NA	False	NA	NA	NA	37355100	37355308	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_37355100_37355300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093725	chr2	+	184	1	Intergenic	novelGene_2884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGACTGCAATGAGAACA	NA	False	NA	NA	False	NA	NA	NA	37356825	37357009	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_37356800_37357000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093733	chr2	-	3265	18	FSM	ENSMUSG00000026915.17	ENSMUST00000072186.12	3144	18	-118	-3	-45	3	multi-exon	FALSE	canonical	3	591	junction_8	55.9640270025228	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTCTTGTGGCCTTCT	NA	False	NA	-1	True	AATAAA	-17	NA	37593405	37473164	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593203
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093751	chr2	+	141	1	Intergenic	novelGene_2885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATTTATATATAATATGC	3191	False	NA	NA	False	NA	NA	NA	37554578	37554719	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_37554600_37554700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093752	chr2	+	177	1	Intergenic	novelGene_2886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAAAGTTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	37627534	37627711	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_37627500_37627700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093762	chr2	+	196	1	Intergenic	novelGene_2887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTCCTCAGCATTAGGAA	NA	False	NA	NA	False	NA	NA	NA	37826884	37827080	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_37826900_37827100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093776	chr2	-	185	1	Intergenic	novelGene_2888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGTATTTAAAAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	38387493	38387308	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_38387300_38387500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093789	chr2	-	1006	8	FSM	ENSMUSG00000026750.7	ENSMUST00000028083.6	1160	8	154	0	-13	0	multi-exon	FALSE	canonical	3	1531	junction_5	118.933011500129	528	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTTGTAATGTTGG	2367	False	NA	-18	True	AATAAA	-24	NA	38533945	38478047	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_38478301_38480708_38480861_38503443_38503503_38523862_38523979_38530084_38530226_38532189_38532288_38533369_38533464_38533852
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093814	chr2	+	200	1	Intergenic	novelGene_2889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGGAGAATGAAATAAAGT	NA	False	NA	NA	False	NA	NA	NA	38740399	38740599	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_38740400_38740600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093820	chr2	+	191	1	Intergenic	novelGene_2890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACTGGAATTCTTACATA	NA	False	NA	NA	False	NA	NA	NA	38758047	38758238	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_38758000_38758200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093824	chr2	+	229	1	Intergenic	novelGene_2891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTCACAAGAACAGGCTAA	NA	False	NA	NA	False	NA	NA	NA	38804207	38804436	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_38804200_38804400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093836	chr2	-	625	3	FSM	ENSMUSG00000062997.7	ENSMUST00000152441.2	541	3	-46	-38	33	-1	multi-exon	FALSE	canonical	3	39700	junction_1	236.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTTCATGTTTTACA	NA	False	NA	-10	True	AATAAA	-18	NA	38895101	38891592	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_38891778_38894118_38894201_38894743
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093851	chr2	+	188	1	Intergenic	novelGene_2892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGTACTGGGGACTGA	NA	False	NA	NA	False	NA	NA	NA	38949214	38949402	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_38949200_38949400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093853	chr2	-	179	1	Intergenic	novelGene_2893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAAGCATTAA	NA	False	NA	NA	False	NA	NA	NA	38987825	38987646	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_38987600_38987800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093855	chr2	-	4093	7	FSM	ENSMUSG00000026753.6	ENSMUST00000028087.6	4115	7	22	0	22	0	multi-exon	FALSE	canonical	3	417	junction_2	25.493463214453	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATCTCATGCAGTATAC	NA	False	NA	NA	False	AATAAA	-29	NA	39116441	39084365	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_39087602_39089674_39089885_39090053_39090134_39094844_39094987_39096663_39096730_39100969_39101066_39116178
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093881	chr2	+	182	1	Intergenic	novelGene_2894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAAAGTTATTC	NA	False	NA	NA	False	NA	NA	NA	44363109	44363291	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_44363100_44363300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093887	chr2	+	234	1	Intergenic	novelGene_2895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTATATTTTAGGGCTGGA	NA	False	NA	NA	False	AATAAA	-39	NA	45026129	45026363	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_45026100_45026400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093898	chr2	+	209	1	Intergenic	novelGene_2896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCACAATTTCTGTATCC	NA	False	NA	NA	False	NA	NA	NA	45191402	45191611	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_45191400_45191600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093911	chr2	+	194	1	Intergenic	novelGene_2897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAATAGTTTACATTTTG	NA	False	NA	NA	False	NA	NA	NA	46225339	46225533	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_46225300_46225500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093923	chr2	-	195	1	Intergenic	novelGene_2898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCATTAAATGAAGAACAAAA	NA	False	NA	NA	False	NA	NA	NA	48729599	48729404	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_48729400_48729600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093944	chr2	-	1614	14	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	-8	116	combination_of_known_junctions	FALSE	canonical	3	42	junction_4	120.796175338176	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCATAAAATGATTTGATA	NA	False	NA	-33	True	AATAAA	-21	NA	48839261	48795211	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800258_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093950	chr2	+	201	1	Intergenic	novelGene_2899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCTAAGTTAATCACCAA	NA	False	NA	NA	False	NA	NA	NA	48812008	48812209	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_48812000_48812200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093954	chr2	+	167	1	Intergenic	novelGene_2900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGAAGAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	49041630	49041797	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_49041600_49041800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093961	chr2	+	5908	18	ISM	ENSMUSG00000026764.16	ENSMUST00000028102.14	6856	26	81073	0	-208	0	3prime_fragment	FALSE	canonical	3	10	junction_17	7.40616034613513	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCTGGTGTCCTTATTT	NA	False	NA	17	True	AATAAA	-18	NA	49590382	49664790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_+_49590618_49590968_49591118_49600731_49600881_49612988_49613162_49617902_49617972_49620128_49620336_49622715_49622863_49625444_49625634_49629094_49629213_49631344_49631422_49631950_49632061_49634376_49634479_49634697_49634759_49639310_49639383_49642260_49642366_49647350_49647568_49648821_49648935_49661175
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093968	chr2	-	1347	8	FSM	ENSMUSG00000026766.17	ENSMUST00000102769.11	1342	8	-5	0	-5	0	multi-exon	FALSE	canonical	3	465	junction_7	76.2190720146573	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTGTTTTTTATTGCA	NA	False	NA	0	True	AATAAA	-20	NA	50186734	50169892	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263_50186322_50186654
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000093987	chr2	-	1653	7	ISM	ENSMUSG00000026766.17	ENSMUST00000102769.11	1342	8	22	0	0	0	intron_retention	FALSE	canonical	3	533	junction_6	61.03664655125	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTGTTTTTTATTGCA	NA	False	NA	0	True	AATAAA	-20	NA	50186707	50169892	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094005	chr2	-	2903	5	FSM	ENSMUSG00000017144.9	ENSMUST00000017288.9	2828	5	-70	-5	-70	5	multi-exon	FALSE	canonical	3	429	junction_2	50.2792203599061	352	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATGTTTTCTGCTTCTT	NA	False	NA	-4	True	AATAAA	-21	NA	51039193	51020444	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_51022558_51024094_51024230_51027147_51027258_51038235_51038324_51038736
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094010	chr2	+	196	1	Intergenic	novelGene_2901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTATCAGCTTCTGGTT	NA	False	NA	NA	False	NA	NA	NA	51077321	51077517	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_51077300_51077500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094017	chr2	+	192	1	Intergenic	novelGene_2902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATACTGTGGTGAGGCTGG	NA	False	NA	NA	False	NA	NA	NA	51951175	51951367	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_51951200_51951400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094027	chr2	+	8499	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-6	5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_16	132.856178183902	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTGCCTGCCTTCACAT	NA	False	NA	29	True	ATTAAA	-24	NA	51962837	52012400	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094031	chr2	+	8413	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	144.087250696058	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTAGTGCCTGCCTTCA	NA	False	NA	26	True	ATTAAA	-21	NA	51962842	52012397	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094060	chr2	-	5249	6	FSM	ENSMUSG00000036093.8	ENSMUST00000036541.8	5239	6	-8	-2	-8	2	multi-exon	FALSE	canonical	3	352	junction_4	32.5059994462561	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTTGGGGGTTTTTGTT	4747	False	NA	-1	True	AATAAA	-24	NA	52314921	52287960	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_52292445_52294917_52295070_52302073_52302158_52306075_52306224_52306647_52306709_52314601
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094070	chr2	+	177	1	Intergenic	novelGene_2903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAGTGTTGGAAA	NA	False	NA	NA	False	NA	NA	NA	52542164	52542341	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_52542200_52542300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094077	chr2	-	4183	14	FSM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	0	534	0	-534	multi-exon	FALSE	canonical	3	181	junction_4	18.080359738789	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAAATGTGGCTGGTCTA	NA	False	NA	NA	False	AATAAA	-26	NA	52632212	52582209	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52609708_52609808_52609913_52609990_52610895_52610981_52632072
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094086	chr2	+	180	1	Intergenic	novelGene_2904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTTAAAGCTTCACTC	NA	False	NA	NA	False	NA	NA	NA	52680868	52681048	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_52680900_52681000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094090	chr2	+	214	1	Intergenic	novelGene_2905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGTTATATTATATGCAT	NA	False	NA	NA	False	NA	NA	NA	52688617	52688831	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_52688600_52688800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094096	chr2	-	171	1	Intergenic	novelGene_2906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTAAAAAAAGCCT	NA	False	NA	NA	False	NA	NA	NA	52955451	52955280	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_52955300_52955500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094104	chr2	-	5268	26	FSM	ENSMUSG00000061136.17	ENSMUST00000239398.2	3565	26	-67	-1636	-4	1399	multi-exon	FALSE	canonical	3	422	junction_25	70.0256410181299	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATTGTCTTGTTTTGAT	NA	False	NA	1	True	TATAAA	-19	NA	53081266	53026850	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081034
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094119	chr2	-	5149	26	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-4	1394	at_least_one_novel_splicesite	FALSE	canonical	3	206	junction_9	120.929824278381	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTACTCTATTGTCTTGTT	NA	False	NA	-4	True	TATAAA	-14	NA	53081266	53026855	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081160
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094138	chr2	+	2575	4	FSM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	-15	-12	-15	12	multi-exon	FALSE	canonical	3	497	junction_2	8.2192186706253	205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCAAGGTTAAAGTTATTA	NA	False	NA	36	True	ATTAAA	-29	NA	53082084	53109244	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_53082535_53084295_53084350_53092930_53093064_53107306
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094149	chr2	+	186	1	Intergenic	novelGene_2907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAAACATGATGAATTCA	NA	False	NA	NA	False	NA	NA	NA	53860478	53860664	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_53860500_53860700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094153	chr2	+	167	1	Intergenic	novelGene_2908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTTTGTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	56853127	56853294	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_56853100_56853300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094160	chr2	+	186	1	Intergenic	novelGene_2909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATTTATTGTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56971871	56972057	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_56971900_56972100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094174	chr2	+	5596	17	FSM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	28	-4	28	4	multi-exon	TRUE	canonical	3	146	junction_2	27.9815089612766	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGGCATTTTGATGTT	NA	False	NA	NA	False	AATAAA	-19	NA	57128421	57260735	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_57128580_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094186	chr2	-	3163	11	FSM	ENSMUSG00000026836.16	ENSMUST00000056376.12	2394	11	-58	-711	-58	3	multi-exon	FALSE	canonical	3	23	junction_9	11.677328461596	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGATTTTCCTTCTTTCT	NA	False	NA	-2	True	AATAAA	-17	NA	58457227	58336449	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_58337686_58338325_58338457_58348896_58349095_58352892_58353169_58358525_58358673_58364184_58364285_58367616_58367829_58369676_58369941_58390495_58390570_58427789_58427886_58456798
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094205	chr2	+	195	1	Intergenic	novelGene_2910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGAGCCAAAGAATTTTG	NA	False	NA	NA	False	NA	NA	NA	59414961	59415156	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_59415000_59415200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094213	chr2	+	171	1	Intergenic	novelGene_2911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAACCACTACA	NA	False	NA	NA	False	NA	NA	NA	59440566	59440737	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_59440600_59440700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094221	chr2	+	7422	27	FSM	ENSMUSG00000035168.17	ENSMUST00000112568.8	7422	27	0	0	0	0	multi-exon	TRUE	canonical	3	118	junction_5	18.3464360565297	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTGGCATTCATTGCT	NA	False	NA	13	True	AATAAA	-15	NA	59442385	59676061	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094230	chr2	+	191	1	Intergenic	novelGene_2912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGCAGCAAGCATT	NA	False	NA	NA	False	NA	NA	NA	59571190	59571381	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_59571200_59571400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094244	chr2	-	7831	36	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39422	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_32	40.5478804901674	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTTTTTTTAGGGG	1592	False	NA	-4	True	AATAAA	-19	NA	59880992	59729706	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59880905
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094255	chr2	-	236	1	Intergenic	novelGene_2913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGTCAACAACTTGCTGA	NA	False	NA	NA	False	AATAAA	-25	NA	59967589	59967353	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_59967400_59967600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094302	chr2	-	6932	35	FSM	ENSMUSG00000026980.16	ENSMUST00000028362.9	5172	35	-97	-1663	-25	6	multi-exon	FALSE	canonical	0	0	junction_19	111.726541471596	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGGCTCAGTGTTTC	NA	False	NA	-5	True	AATAAA	-26	NA	60213672	60122440	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094313	chr2	+	578	3	FSM	ENSMUSG00000087283.2	ENSMUST00000131457.2	566	3	-17	5	-17	-5	multi-exon	FALSE	canonical	3	174	junction_2	3	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGTGTGGTGGTATACC	9329	False	NA	NA	False	NA	NA	NA	60241851	60242918	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_60242062_60242190_60242353_60242712
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094318	chr2	-	180	1	Intergenic	novelGene_2914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATAAAGAACATTG	9146	False	NA	1	True	NA	NA	NA	60244412	60244232	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_60244200_60244400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094328	chr2	+	198	1	Intergenic	novelGene_2915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	887	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATAACACCAGATTTCGA	NA	False	NA	NA	False	NA	NA	NA	60325242	60325440	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_60325200_60325400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094338	chr2	-	2269	14	NIC	ENSMUSG00000026970.17	novel	2543	15	NA	NA	6	-252	combination_of_known_junctions	FALSE	canonical	3	198	junction_5	40.1883141188577	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTAGTAGGTGTTTTTAA	NA	False	NA	-5	True	AATAAA	-28	NA	60711808	60582548	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60711461
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094344	chr2	-	1863	15	FSM	ENSMUSG00000026970.17	ENSMUST00000112509.2	1806	15	6	-63	6	63	multi-exon	FALSE	canonical	3	131	junction_6	64.9034211858871	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAAAGAAAACTTCAAT	NA	False	NA	NA	False	NA	NA	NA	60711808	60583002	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60590102_60590151_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60711461
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094361	chr2	+	1544	12	FSM	ENSMUSG00000026914.16	ENSMUST00000028278.14	1541	12	-1	-2	-1	2	multi-exon	FALSE	canonical	3	1717	junction_5	150.997564426748	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCGAGGTCTTTTTGGC	8546	False	NA	33	True	AATAAA	-19	NA	61542036	61630722	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_61542218_61550787_61550916_61553053_61553106_61590979_61591052_61591318_61591439_61594180_61594252_61595192_61595344_61607016_61607125_61614176_61614252_61615777_61615904_61627738_61627802_61630325
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094385	chr2	+	177	1	Intergenic	novelGene_2916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAGTTCTTTGCAAC	NA	False	NA	NA	False	NA	NA	NA	62183571	62183748	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_62183600_62183700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094390	chr2	+	224	1	Intergenic	novelGene_2917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAACAGTAGCAATATCAAC	NA	False	NA	NA	False	NA	NA	NA	62188538	62188762	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_62188500_62188800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094402	chr2	+	3207	8	FSM	ENSMUSG00000026893.5	ENSMUST00000028257.3	3330	8	0	123	0	-123	multi-exon	FALSE	canonical	3	236	junction_6	22.3332825667003	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTTTTTAAATGTTCT	NA	False	NA	5	True	AATAAA	-17	NA	62494628	62524330	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_62494804_62502620_62502795_62509499_62509570_62516308_62516353_62516620_62516769_62520304_62520419_62520734_62520794_62521907
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094408	chr2	+	209	1	Intergenic	novelGene_2918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	431	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAACTGTCTAAACATGA	NA	False	NA	NA	False	NA	NA	NA	62877601	62877810	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_62877600_62877800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094426	chr2	+	202	1	Intergenic	novelGene_2919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGGCTGGTGAGATGGC	NA	False	NA	NA	False	NA	NA	NA	65150282	65150484	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_65150300_65150500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094431	chr2	-	177	1	Intergenic	novelGene_2920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAGAGAAAAAAGGG	NA	False	NA	NA	False	NA	NA	NA	65745121	65744944	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_65744900_65745100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094437	chr2	+	196	1	Intergenic	novelGene_2921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGATAGCTCTCTGGAAA	NA	False	NA	NA	False	NA	NA	NA	66466270	66466466	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_66466300_66466500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094452	chr2	+	6802	11	NNC	ENSMUSG00000027035.11	novel	7038	10	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	18.4759302878096	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCATGAGTGTCCTTTATT	NA	False	NA	5	True	AATAAA	-18	NA	68691812	68944626	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_68692150_68764858_68764965_68777570_68777702_68833090_68833149_68877488_68877540_68881123_68881217_68898972_68899102_68901675_68901783_68935346_68935504_68938785_68943365_68943572
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094453	chr2	+	6908	11	NNC	ENSMUSG00000027035.11	novel	1279	11	NA	NA	-1	2	at_least_one_novel_splicesite	TRUE	canonical	3	48	junction_8	6.39140047250992	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGAGTGTCCTTTATTGT	NA	False	NA	7	True	AATAAA	-20	NA	68691812	68944628	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_68692150_68764858_68764965_68777570_68777702_68833090_68833149_68877488_68877540_68881123_68881217_68898972_68899102_68901675_68901783_68935346_68935504_68938785_68943469_68943572
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094473	chr2	+	447	1	Intergenic	novelGene_2922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGAGGTTTTAGGGCTTT	3277	False	NA	NA	False	ACTAAA	-11	NA	69026277	69026724	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_69026300_69026700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094481	chr2	+	226	1	Intergenic	novelGene_2923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGTGCAAAGATGAAGG	4022	False	NA	NA	False	NA	NA	NA	69398516	69398742	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_69398500_69398700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094490	chr2	+	178	1	Intergenic	novelGene_2924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAATGCTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69431528	69431706	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_69431500_69431700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094499	chr2	+	227	1	Intergenic	novelGene_2925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGACCACATGTGAGACT	NA	False	NA	NA	False	NA	NA	NA	69468586	69468813	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_69468600_69468800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094505	chr2	+	256	1	Intergenic	novelGene_2926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTGAGCATGGTGGTT	NA	False	NA	NA	False	NA	NA	NA	69476057	69476313	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_69476100_69476300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094515	chr2	+	1448	12	FSM	ENSMUSG00000063145.11	ENSMUST00000074963.9	1468	12	20	0	-2	0	multi-exon	FALSE	canonical	3	71	junction_4	9.81144550053239	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGTTTTGAAAGTATTA	NA	False	NA	6	True	AATAAA	-20	NA	69477571	69497915	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_69477687_69479365_69479449_69483125_69483192_69484406_69484457_69484589_69484718_69485842_69485979_69487240_69487337_69491379_69491443_69493369_69493505_69495369_69495454_69497284_69497309_69497447
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094522	chr2	+	211	1	Intergenic	novelGene_2927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAATGCTGGGAAGACCT	NA	False	NA	NA	False	AAGAAA	-14	NA	69489253	69489464	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_69489300_69489500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094529	chr2	-	151	1	Intergenic	novelGene_2928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAACAAAGGAAGGAA	NA	False	NA	1	True	NA	NA	NA	69507782	69507631	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_69507600_69507800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094540	chr2	-	3769	14	FSM	ENSMUSG00000027086.17	ENSMUST00000073152.13	2865	14	-904	0	6	0	multi-exon	FALSE	canonical	0	0	junction_12	59.5439273976854	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTATGGCCCACCATATA	7061	False	NA	NA	False	NA	NA	NA	69543854	69517158	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_69517485_69520406_69520522_69521578_69521709_69524212_69524327_69524859_69524992_69527186_69527316_69530467_69530583_69532706_69533194_69534596_69534729_69535765_69535877_69537651_69538051_69538854_69538981_69541837_69541907_69542470
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094544	chr2	+	182	1	Intergenic	novelGene_2929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAGAAGAGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	69518672	69518854	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_69518700_69518900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094549	chr2	+	6125	14	FSM	ENSMUSG00000042133.17	ENSMUST00000090858.10	6127	14	0	2	0	-2	multi-exon	TRUE	canonical	3	282	junction_1	41.7748260879032	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGGATTGTGCTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	69553148	69584354	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094559	chr2	+	2790	15	NIC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	-19	1067	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	118.295461986209	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTGGTGTAATACTGTG	NA	False	NA	NA	False	AATAAA	-23	NA	69553178	69580959	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_69553302_69561834_69561925_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094576	chr2	+	187	1	Intergenic	novelGene_2930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTTACCTCAAACTATTA	NA	False	NA	NA	False	NA	NA	NA	69573055	69573242	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_69573100_69573200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094588	chr2	+	2252	4	FSM	ENSMUSG00000027088.11	ENSMUST00000028494.9	2260	4	8	0	-6	0	multi-exon	FALSE	canonical	3	95	junction_2	4.49691252107735	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTTCTGAAATCTTTT	NA	False	NA	26	True	AATAAA	-16	NA	69619987	69627567	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_69620301_69620629_69620666_69622680_69622836_69625819
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094604	chr2	+	189	1	Intergenic	novelGene_2931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTCAATGTAAACAGGGA	NA	False	NA	NA	False	NA	NA	NA	69657377	69657566	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_69657400_69657600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094617	chr2	+	2068	12	FSM	ENSMUSG00000068882.14	ENSMUST00000090852.11	2001	12	-7	-60	-7	0	multi-exon	FALSE	canonical	3	1543	junction_7	118.150135613357	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTCACTTTGGACATA	NA	False	NA	22	True	ATTAAA	-23	NA	69691898	69702190	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_69692057_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094625	chr2	+	1683	12	NIC	ENSMUSG00000068882.14	novel	2001	12	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	167	junction_10	472.143538196974	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAATAGTTCTTTCTTCTT	NA	False	NA	14	True	TATAAA	-5	NA	69691944	69701854	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_69692057_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701024_69701178_69701465
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094658	chr2	+	236	1	Intergenic	novelGene_2932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAATGATGCTTTATAGT	NA	False	NA	NA	False	NA	NA	NA	69705014	69705250	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_69705000_69705200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094662	chr2	-	221	1	Intergenic	novelGene_2933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTAAGAAGATATTTACAG	NA	False	NA	NA	False	NA	NA	NA	69738203	69737982	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_69738000_69738200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094665	chr2	-	186	1	Intergenic	novelGene_2934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTCATAGTAAAACCAAGAA	NA	False	NA	0	True	TTTAAA	-3	NA	69741370	69741184	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_69741200_69741400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094675	chr2	-	222	1	Intergenic	novelGene_2935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGGTTCTTTCCAACCAT	NA	False	NA	NA	False	NA	NA	NA	69752154	69751932	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_69751900_69752200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094682	chr2	+	212	1	Intergenic	novelGene_2936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAATAACCAAGGAACAGAA	6676	False	NA	NA	False	NA	NA	NA	69757196	69757408	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_69757200_69757400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094694	chr2	+	244	1	Intergenic	novelGene_2937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTACATTCTCAACTGG	NA	False	NA	NA	False	AAAACA	-13	NA	70244127	70244371	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_70244100_70244400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094699	chr2	+	1917	2	FSM	ENSMUSG00000075304.3	ENSMUST00000100043.3	2100	2	183	0	183	0	multi-exon	FALSE	canonical	3	75	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTCTCCTCTGATCTTT	NA	False	NA	23	True	AATAAA	-40	NA	70305449	70308073	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_70305661_70306367
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094709	chr2	+	182	1	Intergenic	novelGene_2938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAACCTTAACTAAG	3461	False	NA	NA	False	NA	NA	NA	70462411	70462593	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_70462400_70462600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094735	chr2	+	178	1	Intergenic	novelGene_2939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAAGCCTATGGC	NA	False	NA	NA	False	NA	NA	NA	70530589	70530767	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_70530600_70530800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094742	chr2	-	4416	21	NIC	ENSMUSG00000041997.17	novel	4271	22	NA	NA	-67	0	combination_of_known_junctions	TRUE	canonical	3	27	junction_18	66.7850844126142	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGTGAAAATTACACTCA	NA	False	NA	NA	False	AATAAA	-22	NA	70656139	70542750	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70599205_70599275_70600347_70600420_70617220_70617340_70655536
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094747	chr2	-	4471	20	FSM	ENSMUSG00000041997.17	ENSMUST00000038584.9	4280	20	-191	0	-191	0	multi-exon	FALSE	canonical	3	163	junction_17	29.5425886295749	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGTGAAAATTACACTCA	NA	False	NA	NA	False	AATAAA	-22	NA	70656263	70542750	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094759	chr2	+	247	1	Intergenic	novelGene_2940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAATATTCTAACAACCCT	NA	False	NA	NA	False	NA	NA	NA	70612121	70612368	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_70612100_70612400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094764	chr2	+	198	1	Intergenic	novelGene_2941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGCCCTGTTTCAAAAC	NA	False	NA	NA	False	NA	NA	NA	70638289	70638487	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_70638300_70638500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094773	chr2	-	2117	10	NIC	ENSMUSG00000041975.18	novel	2347	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_7	29.4505234814822	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTGTTGGAGTTTT	NA	False	NA	0	True	NA	NA	NA	70885925	70794904	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_70796024_70796791_70796858_70797393_70797501_70803596_70803737_70806417_70806482_70810720_70810771_70812198_70812312_70823827_70823920_70848563_70848719_70885714
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094775	chr2	-	2350	10	FSM	ENSMUSG00000041975.18	ENSMUST00000112186.9	2347	10	-3	0	-3	0	multi-exon	FALSE	canonical	3	72	junction_7	14.8332292963476	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTGTTGGAGTTTT	NA	False	NA	0	True	NA	NA	NA	70885930	70794904	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_70796024_70796791_70796858_70797393_70797501_70803596_70803737_70806417_70806482_70810720_70810771_70812198_70812540_70823827_70823920_70848563_70848719_70885714
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094798	chr2	+	213	1	Intergenic	novelGene_2942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCTGTGCAAAACCAGG	NA	False	NA	NA	False	ATTAAA	-17	NA	70997933	70998146	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_70997900_70998100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094811	chr2	+	2510	16	FSM	ENSMUSG00000027012.16	ENSMUST00000112138.8	2466	16	-32	-12	-15	0	multi-exon	FALSE	canonical	3	270	junction_1	83.3153580613376	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCACTTTTACTTTTTGA	NA	False	NA	24	True	AATAAA	-26	NA	71042069	71093647	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_71042190_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094819	chr2	+	2499	16	FSM	ENSMUSG00000027012.16	ENSMUST00000081710.12	2631	16	132	0	-6	0	multi-exon	FALSE	canonical	3	499	junction_2	40.1836893389456	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCACTTTTACTTTTTGA	NA	False	NA	24	True	AATAAA	-26	NA	71042309	71093647	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_71042419_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094833	chr2	+	217	1	ISM	ENSMUSG00000027012.16	ENSMUST00000149735.2	2248	4	18114	207	-4681	-207	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGGGTGGTTCCAAATAA	4688	False	NA	NA	False	AATAAA	-12	NA	71060461	71060678	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_+_71060500_71060700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094854	chr2	+	176	1	Intergenic	novelGene_2943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAGAAAGAAACTA	NA	False	NA	NA	False	NA	NA	NA	71156638	71156814	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_71156600_71156800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094862	chr2	+	190	1	Intergenic	novelGene_2944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGATAAACCTTGCCA	2029	False	NA	NA	False	NA	NA	NA	71216514	71216704	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_71216500_71216700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094885	chr2	+	1252	10	FSM	ENSMUSG00000041921.17	ENSMUST00000037210.9	1321	10	62	7	5	-7	multi-exon	TRUE	canonical	3	42	junction_6	11.0565326201412	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTCAAACCTATTGTGT	NA	False	NA	NA	False	NA	NA	NA	71283681	71355528	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_71283743_71337128_71337287_71340084_71340235_71341755_71341905_71342469_71342513_71345980_71346145_71352876_71352975_71354145_71354194_71355060_71355140_71355226
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094889	chr2	+	5947	25	NIC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	-59	1	intron_retention	FALSE	canonical	3	444	junction_20	38.1094686032516	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATTTTATTTATTTTAG	NA	False	NA	100	True	TATAAA	-15	NA	71617213	71688761	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094908	chr2	+	189	1	Intergenic	novelGene_2945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGTGTGTCACTTGGGA	9723	False	NA	NA	False	NA	NA	NA	71755565	71755754	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_71755600_71755800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094913	chr2	+	178	1	Intergenic	novelGene_2946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAAAAAAGAATAGTGCC	NA	False	NA	NA	False	NA	NA	NA	71903187	71903365	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_71903200_71903400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094946	chr2	+	185	1	Intergenic	novelGene_2947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATTTGAAGTAAATCAAC	NA	False	NA	NA	False	NA	NA	NA	72495795	72495980	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_72495800_72496000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094950	chr2	-	147	1	Intergenic	novelGene_2948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATGATTTATTATTAAT	NA	False	NA	NA	False	NA	NA	NA	72509593	72509446	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_72509400_72509600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094954	chr2	-	207	1	Intergenic	novelGene_2949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTATGGTGCTCTGTGGA	NA	False	NA	NA	False	TTTAAA	-1	NA	72756171	72755964	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_72756000_72756200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094961	chr2	-	4215	7	FSM	ENSMUSG00000027109.17	ENSMUST00000102689.10	4181	7	-37	3	-37	-3	multi-exon	FALSE	canonical	3	107	junction_6	141.426561233109	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGCTTGAAAAAGTCTAA	2848	False	NA	-15	True	ATTAAA	-22	NA	72810827	72766773	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241_72809374_72809830_72809977_72810593
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094990	chr2	-	224	1	Intergenic	novelGene_2950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCGCTTAGCTTAGCTAC	7594	False	NA	NA	False	NA	NA	NA	72879019	72878795	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_72878800_72879000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000094992	chr2	-	2161	11	FSM	ENSMUSG00000027108.16	ENSMUST00000028517.13	2175	11	14	0	-7	0	multi-exon	FALSE	canonical	3	336	junction_4	35.4120036145937	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTCGTTTCTAAGGGGT	NA	False	NA	-13	True	ATTAAA	-14	NA	73044777	72923144	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_72924069_72927488_72927612_72929635_72929733_72930417_72930559_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73043203_73043305_73044629
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095019	chr2	+	3227	8	FSM	ENSMUSG00000008226.15	ENSMUST00000090811.11	3309	8	78	4	3	-4	multi-exon	FALSE	canonical	3	42	junction_5	26.8791702981764	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTCATTTGATCTTTGA	NA	False	NA	NA	False	AATAAA	-26	NA	73143022	73168158	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_73143058_73145775_73145937_73148589_73148772_73149646_73149844_73152328_73152539_73160106_73160270_73161326_73161502_73166054
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095024	chr2	+	185	1	Intergenic	novelGene_2951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAAGTTGATAACTTTT	NA	False	NA	NA	False	NA	NA	NA	73164923	73165108	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_73164900_73165100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095045	chr2	-	2400	13	FSM	ENSMUSG00000056486.19	ENSMUST00000112024.10	4050	13	-26	1676	-26	0	multi-exon	FALSE	canonical	1	103	junction_1	53.6273147648555	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAATAGCTTTTTTTCTT	NA	False	NA	59	True	ATTAAA	-23	NA	73605716	73442679	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73490023_73490102_73509958_73510248_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095055	chr2	-	4226	14	FSM	ENSMUSG00000027104.19	ENSMUST00000112017.8	2396	14	-73	-1757	0	0	multi-exon	FALSE	canonical	3	231	junction_5	32.1212569481487	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGTTTTTAATCTGT	NA	False	NA	1	True	AATAAA	-26	NA	73722972	73646852	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095068	chr2	-	4048	13	FSM	ENSMUSG00000027104.19	ENSMUST00000112010.9	4037	13	-14	3	0	-3	multi-exon	FALSE	canonical	3	85	junction_9	68.6093510795398	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGCTTGTTTTTAATC	NA	False	NA	-2	True	AATAAA	-23	NA	73722894	73646855	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73693512_73693583_73704013_73704090_73710628_73710726_73722818
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095097	chr2	+	204	1	Intergenic	novelGene_2952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACTTTCTGGGTATATG	NA	False	NA	NA	False	NA	NA	NA	73668451	73668655	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_73668500_73668700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095102	chr2	+	198	1	Intergenic	novelGene_2953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAGGTTGTTTGGGGAAC	NA	False	NA	NA	False	NA	NA	NA	73727483	73727681	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_73727500_73727700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095107	chr2	-	177	1	Intergenic	novelGene_2954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAGAATTAATGAC	NA	False	NA	NA	False	NA	NA	NA	73732804	73732627	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_73732600_73732800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095110	chr2	+	190	1	Intergenic	novelGene_2955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCTTATGTGTATGTAC	NA	False	NA	NA	False	NA	NA	NA	73736849	73737039	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_73736800_73737000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095130	chr2	-	698	5	FSM	ENSMUSG00000018770.10	ENSMUST00000111996.8	723	5	25	0	-9	0	multi-exon	FALSE	canonical	3	880	junction_4	1495.60896878161	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	False	NA	-21	True	ATTAAA	-15	NA	73741644	73738790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_73739052_73739527_73739722_73740207_73740286_73741298_73741405_73741585
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095144	chr2	-	3194	13	FSM	ENSMUSG00000009207.16	ENSMUST00000064503.13	3195	13	1	0	1	0	multi-exon	FALSE	canonical	3	222	junction_6	31.6842056692114	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTTTATTTTTATTTT	NA	False	NA	-14	True	ATTAAA	-43	NA	74409291	74350677	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095158	chr2	+	1254	10	FSM	ENSMUSG00000027099.10	ENSMUST00000028511.8	2950	10	5	1691	5	236	multi-exon	FALSE	canonical	3	767	junction_7	57.1160827926797	253	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTCATTTACTTTGAT	NA	False	NA	18	True	AATAAA	-16	NA	74656151	74707084	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_74656388_74677581_74677630_74678642_74678690_74689748_74689822_74697214_74697292_74698663_74698757_74699226_74699266_74699647_74699774_74700751_74700829_74706646
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095171	chr2	+	854	1	Antisense	novelGene_ENSMUSG00000081406.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACATTTTCTATTTTAACA	NA	False	NA	NA	False	NA	NA	NA	75021344	75022198	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr2_+_75021300_75022200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095175	chr2	-	179	1	Intergenic	novelGene_2956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAAAAACCCTGGA	NA	False	NA	NA	False	NA	NA	NA	75399645	75399466	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_75399500_75399600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095184	chr2	+	176	1	Intergenic	novelGene_2957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATGTTCTCAACTTT	NA	False	NA	3	True	NA	NA	NA	75432786	75432962	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_75432800_75433000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095190	chr2	+	177	1	Intergenic	novelGene_2958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAGAGCTCACAGA	NA	False	NA	NA	False	NA	NA	NA	75446313	75446490	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_75446300_75446500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095208	chr2	+	152	1	Intergenic	novelGene_2959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGAAGAATTGCTTTT	NA	False	NA	NA	False	NA	NA	NA	75467480	75467632	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_75467500_75467600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095223	chr2	+	5156	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	-6	0	0	0	multi-exon	FALSE	canonical	3	3726	junction_1	2097.55310779012	1533	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTTTTATCATTTTG	7475	False	NA	3	True	ATTAAA	-18	NA	75489604	75499751	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095231	chr2	+	1679	10	FSM	ENSMUSG00000093242.4_ENSMUSG00000059005.14	ENSMUST00000090792.11	1140	10	-57	-482	0	-71	multi-exon	FALSE	canonical	3	3912	junction_1	2101.42958982395	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGTAGTTCAGTTTT	7475	False	NA	NA	False	NA	NA	NA	75489604	75496112	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095238	chr2	+	1607	10	FSM	ENSMUSG00000093242.4_ENSMUSG00000059005.14	ENSMUST00000164947.9	1074	10	-51	-482	0	-71	multi-exon	FALSE	canonical	3	3726	junction_1	2155.72848103619	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGTAGTTCAGTTTT	7481	False	NA	NA	False	NA	NA	NA	75489610	75496112	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095253	chr2	-	2399	5	FSM	ENSMUSG00000015839.7	ENSMUST00000102672.5	2475	5	77	-1	-75	1	multi-exon	FALSE	canonical	3	494	junction_1	38.2058568808501	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGACTTTTTGAATTTAT	NA	False	NA	2	True	AATAAA	-23	NA	75534908	75505855	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_75507529_75507888_75508057_75508831_75508922_75509506_75509774_75534707
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095269	chr2	-	219	1	Intergenic	novelGene_2960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTATAGCTGGAAACAGGA	NA	False	NA	NA	False	NA	NA	NA	75508663	75508444	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_75508400_75508700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095275	chr2	-	176	1	Intergenic	novelGene_2961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAGGAAGCTAC	NA	False	NA	NA	False	NA	NA	NA	75643880	75643704	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_75643700_75643900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095281	chr2	+	7362	20	FSM	ENSMUSG00000042410.17	ENSMUST00000047232.14	7359	20	-3	0	-3	0	multi-exon	FALSE	canonical	3	643	junction_12	64.0151038271871	744	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGTTTACAGAACCTTT	484	False	NA	5	True	AATAAA	-17	NA	75662517	75761694	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095295	chr2	+	229	1	Intergenic	novelGene_2962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGGAATATGTCAAACA	7984	False	NA	NA	False	NA	NA	NA	75691189	75691418	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_75691200_75691400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095305	chr2	-	2649	1	FSM	ENSMUSG00000075271.5	ENSMUST00000099994.5	3721	1	198	874	198	-874	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTTACTGTTCATAA	NA	False	NA	-15	True	AATAAA	-16	NA	75812113	75809464	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_75809500_75812100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095310	chr2	-	631	4	FSM	ENSMUSG00000056436.5	ENSMUST00000028430.6	655	4	19	5	19	-5	multi-exon	FALSE	canonical	3	132	junction_3	45.146674542232	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCACTCGTGCGTTATGTT	NA	False	NA	-4	True	AATAAA	-25	NA	76190775	76184290	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_76184581_76186423_76186617_76187916_76187946_76190656
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095313	chr2	+	184	1	Intergenic	novelGene_2963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCTTTTCTTCTGCAAG	NA	False	NA	NA	False	NA	NA	NA	76196481	76196665	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_76196500_76196700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095320	chr2	+	1900	10	FSM	ENSMUSG00000042369.9	ENSMUST00000046389.5	1898	10	-2	0	-2	0	multi-exon	FALSE	canonical	3	321	junction_1	22.7991769398766	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGACTTATTTATATGAA	NA	False	NA	55	True	AATAAA	-21	NA	76200325	76214112	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_76200773_76202378_76202502_76203903_76204031_76205699_76205823_76206662_76206849_76208724_76208855_76209021_76209107_76209261_76209426_76210708_76210910_76213798
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095344	chr2	+	2548	8	FSM	ENSMUSG00000002733.9	ENSMUST00000111920.2	2534	8	-11	-3	-11	3	multi-exon	FALSE	canonical	3	204	junction_7	23.0465367711259	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTTTGTTTATTGTGT	6495	False	NA	9	True	ATTAAA	-22	NA	76505613	76527175	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_76505979_76510506_76510624_76513073_76513230_76516962_76517100_76517625_76517791_76520788_76520833_76522992_76523109_76525727
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095354	chr2	-	3434	18	FSM	ENSMUSG00000042272.18	ENSMUST00000102659.2	2720	18	-234	-480	-234	480	multi-exon	FALSE	canonical	3	86	junction_17	13.2907335619941	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTATGTTTGTATTAA	NA	False	NA	NA	False	AATAAA	-20	NA	77111170	77016418	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77110898
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095373	chr2	-	183	1	Intergenic	novelGene_2964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAATGAGAGTACGTGAA	NA	False	NA	NA	False	NA	NA	NA	77361349	77361166	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_77361200_77361300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095377	chr2	+	182	1	Intergenic	novelGene_2965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGTGAATGTCTATGTA	NA	False	NA	NA	False	NA	NA	NA	77519936	77520118	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_77519900_77520100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095384	chr2	-	3092	20	FSM	ENSMUSG00000027014.15	ENSMUST00000111818.8	3255	20	165	-2	1	0	multi-exon	FALSE	canonical	3	78	junction_1	52.4085273558816	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTCTTTTTTTCTAAA	NA	False	NA	NA	False	AATAAA	-21	NA	77776532	77726109	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_77726923_77734157_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77776493
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095385	chr2	-	3306	20	FSM	ENSMUSG00000027014.15	ENSMUST00000111821.9	3388	20	-31	113	-9	0	multi-exon	FALSE	canonical	3	143	junction_19	43.213763581536	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTCTTTTTTTCTAAA	NA	False	NA	NA	False	AATAAA	-21	NA	77776728	77726109	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_77726923_77734139_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77776493
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095396	chr2	-	3095	20	FSM	ENSMUSG00000027014.15	ENSMUST00000111819.8	3090	20	-5	0	1	0	multi-exon	FALSE	canonical	3	78	junction_1	57.3448044097962	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTCTTTTTTTCTAAA	NA	False	NA	NA	False	AATAAA	-21	NA	77776532	77726109	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_77726923_77734157_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763111_77766936_77767067_77776493
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095400	chr2	-	3110	20	NIC	ENSMUSG00000027014.15	novel	3090	20	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	3	102	junction_18	49.445736787175	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTCTTTTTTTCTAAA	NA	False	NA	NA	False	AATAAA	-21	NA	77776529	77726109	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_77726923_77734139_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763111_77766936_77767067_77776493
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095423	chr2	+	1680	6	FSM	ENSMUSG00000027011.15	ENSMUST00000028398.14	2249	6	-4	573	-4	423	multi-exon	FALSE	canonical	3	305	junction_4	9.66643677887566	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTGTAGAGTTTTTT	NA	False	NA	11	True	ATTAAA	-18	NA	78699386	78751064	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_78699750_78700800_78701023_78702765_78702817_78744017_78744151_78749030_78749179_78750301
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095429	chr2	+	230	1	Intergenic	novelGene_2966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCCCCAGGAGGTCACAC	NA	False	NA	NA	False	NA	NA	NA	78954908	78955138	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_78954900_78955100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095437	chr2	+	5243	18	FSM	ENSMUSG00000027007.17	ENSMUST00000111785.9	5168	18	-75	0	-75	0	multi-exon	FALSE	canonical	3	47	junction_14	7.70386143235054	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAATTTATTTTTTGAG	NA	False	NA	19	True	AATAAA	-20	NA	79465620	79503310	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_79466089_79466376_79466423_79469600_79469651_79470489_79470547_79472305_79472346_79472434_79472534_79473747_79473957_79474748_79475453_79481731_79481805_79485430_79485520_79487490_79488694_79490576_79490655_79490736_79490865_79491197_79491349_79491982_79492049_79492652_79493109_79501073_79501192_79502102
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095441	chr2	+	915	2	Intergenic	novelGene_2967	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	57	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAGTATAATCTTCATCA	NA	False	NA	NA	False	AATAAA	-17	NA	80026597	80042030	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_80026685_80041202
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095444	chr2	+	4035	23	FSM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	11	-4	11	4	multi-exon	FALSE	canonical	3	242	junction_19	21.5763108543292	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTGAAGATGATTGTT	NA	False	NA	16	True	AATAAA	-22	NA	80145820	80184391	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095455	chr2	-	4513	31	FSM	ENSMUSG00000027002.14	ENSMUST00000028386.12	4469	31	-44	0	-44	0	multi-exon	TRUE	canonical	3	653	junction_15	66.8594213422628	546	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTCTTTAAAATCTTTG	NA	False	NA	0	True	AATAAA	-25	NA	80411652	80330855	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095464	chr2	+	212	1	Intergenic	novelGene_2968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTAAGGGGGTTCTGA	NA	False	NA	NA	False	AAAACA	-11	NA	80355380	80355592	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_80355400_80355600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095478	chr2	+	1771	9	FSM	ENSMUSG00000026999.15	ENSMUST00000028382.13	1559	9	0	-212	0	208	multi-exon	FALSE	canonical	3	149	junction_4	57.0169930810105	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAAGTTTGTTAATATG	NA	False	NA	NA	False	AATAAA	-16	NA	80469159	80489458	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_80469277_80472968_80473140_80474495_80474624_80476752_80476808_80483197_80483340_80485136_80485207_80486292_80486422_80487532_80487698_80488664
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095493	chr2	+	234	1	Intergenic	novelGene_2969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAAAGAAAATTAATATCT	NA	False	NA	NA	False	NA	NA	NA	80482351	80482585	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_80482400_80482600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095498	chr2	+	1682	1	FSM	ENSMUSG00000064193.9	ENSMUST00000138679.2	1302	1	-47	-333	-47	333	mono-exon	FALSE	NA	NA	NA	NA	NA	5095	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAATTAGAGATACC	NA	False	NA	8	True	AATAAA	-28	NA	80667437	80669119	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_80667400_80669100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095505	chr2	+	94	1	Intergenic	novelGene_2970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAAAAGCAATGGGGAG	NA	False	NA	NA	False	NA	NA	NA	81680449	81680543	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_81680400_81680500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095512	chr2	+	4896	10	FSM	ENSMUSG00000027091.15	ENSMUST00000081591.7	2111	10	41	-2826	-5	2826	multi-exon	FALSE	canonical	3	620	junction_6	95.2257875645245	347	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGGGTGTTATTTTCTA	NA	False	NA	7	True	AATAAA	-18	NA	83474819	83497792	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488506_83488873_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095522	chr2	-	185	1	Intergenic	novelGene_2971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCACACTGTTCTGCCA	NA	False	NA	NA	False	NA	NA	NA	83524405	83524220	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_83524200_83524400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095530	chr2	+	195	1	Intergenic	novelGene_2972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTAGGTCTGTATACTAC	NA	False	NA	NA	False	NA	NA	NA	83547697	83547892	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_83547700_83547900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095538	chr2	+	6997	30	FSM	ENSMUSG00000027087.12	ENSMUST00000028499.11	7054	30	55	2	0	-2	multi-exon	FALSE	canonical	3	32	junction_1	22.0930902622631	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCTGTGTGGATTCTAT	NA	False	NA	19	True	AATAAA	-19	NA	83554795	83637258	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_83555264_83566853_83566985_83578196_83578289_83586149_83586265_83592211_83592274_83593995_83594042_83596111_83596238_83596970_83597016_83598638_83598683_83599035_83599093_83600396_83600450_83601478_83601682_83606711_83606904_83609357_83609404_83612282_83612391_83614148_83614208_83615676_83615832_83619260_83619399_83621538_83621607_83622236_83622385_83622894_83622988_83624577_83624658_83625262_83625344_83625782_83625889_83626429_83626589_83627694_83627797_83632113_83632228_83632321_83632430_83633223_83633347_83633583
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095544	chr2	+	6953	30	NIC	ENSMUSG00000027087.12	novel	7054	30	NA	NA	27	-2	intron_retention	FALSE	canonical	3	66	junction_1	18.5760640227655	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCTGTGTGGATTCTAT	NA	False	NA	19	True	AATAAA	-19	NA	83554836	83637258	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_83555264_83566856_83566985_83578196_83578289_83586149_83586265_83592211_83592274_83593995_83594042_83596111_83596238_83596970_83597016_83598638_83598683_83599035_83599093_83600396_83600450_83601478_83601682_83606711_83606904_83609357_83609404_83612282_83612391_83614148_83614208_83615676_83615832_83619260_83619399_83621538_83621607_83622236_83622385_83622894_83622988_83624577_83624658_83625262_83625344_83625782_83625889_83626429_83626589_83627694_83627797_83632113_83632228_83632321_83632430_83633223_83633347_83633583
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095549	chr2	-	186	1	Intergenic	novelGene_2973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCCAATATGCTTTATTG	NA	False	NA	NA	False	NA	NA	NA	84250389	84250203	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_84250200_84250400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095558	chr2	-	1338	9	NIC	ENSMUSG00000027082.16	novel	2027	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	91	junction_8	41.6863286941894	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTGACTGTCCCCCTT	NA	False	NA	-2	True	AATAAA	-19	NA	84307107	84263198	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84307034
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095561	chr2	-	1300	9	NIC	ENSMUSG00000027082.16	novel	2027	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_8	40.1230529122598	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTGACTGTCCCCCTT	NA	False	NA	-2	True	AATAAA	-19	NA	84307119	84263198	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84307084
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095577	chr2	+	169	1	Intergenic	novelGene_2974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAGAGCAGGCTGAG	NA	False	NA	NA	False	NA	NA	NA	84407739	84407908	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_84407700_84407900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095588	chr2	-	5387	19	FSM	ENSMUSG00000034101.15	ENSMUST00000111691.2	5380	19	-7	0	-7	0	multi-exon	FALSE	canonical	3	163	junction_18	37.1560356827033	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84481116	84431126	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84442875_84442894_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095600	chr2	-	5075	19	NNC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	-8212	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_18	60.7195790824559	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84489321	84431126	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84442875_84442894_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84489266
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095621	chr2	+	217	1	Intergenic	novelGene_2975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCAGATCTTGCTAATA	NA	False	NA	NA	False	AATATA	-20	NA	84482968	84483185	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_84483000_84483200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095631	chr2	-	716	4	FSM	ENSMUSG00000076437.12	ENSMUST00000117299.10	747	4	31	0	31	0	multi-exon	FALSE	canonical	3	1785	junction_1	271.099407761966	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTTTAAATTTTGTCTT	327	False	NA	-8	True	AATAAA	-25	NA	84501083	84499558	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_84499742_84500330_84500461_84500588_84500735_84500826
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095654	chr2	-	2026	8	FSM	ENSMUSG00000050043.17	ENSMUST00000053664.9	1977	8	-44	-5	18	4	multi-exon	FALSE	canonical	3	1517	junction_2	94.3986336808766	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTTTTTCCTTTACT	5247	False	NA	-3	True	AATAAA	-21	NA	84508444	84501655	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506088_84506203_84506440_84506502_84508194
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095670	chr2	+	2820	5	FSM	ENSMUSG00000027080.7	ENSMUST00000102645.4	2059	5	10	-771	10	771	multi-exon	FALSE	canonical	3	447	junction_3	24.2525771826418	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTGGTTCCCTCCAGGG	3367	False	NA	20	True	AATAAA	-24	NA	84508755	84519330	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_84509006_84515534_84515792_84515946_84516044_84516534_84516630_84517209
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095696	chr2	+	185	1	Intergenic	novelGene_2976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCAAACATTTGTTTAT	522	False	NA	NA	False	NA	NA	NA	84550461	84550646	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_84550500_84550600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095702	chr2	-	1858	3	FSM	ENSMUSG00000027079.16	ENSMUST00000028475.9	1912	3	57	-3	-17	3	multi-exon	FALSE	canonical	3	238	junction_1	30.5	244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGATTCTTTTTTTAAT	NA	False	NA	-18	True	AATAAA	-20	NA	84557637	84553462	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_84554562_84555872_84556501_84557506
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095719	chr2	-	177	1	Intergenic	novelGene_2977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAGAGAAAGAGAATA	NA	False	NA	NA	False	NA	NA	NA	84617038	84616861	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_84616900_84617000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095728	chr2	+	1367	4	FSM	ENSMUSG00000027078.15	ENSMUST00000102642.9	1560	4	20	173	14	-173	multi-exon	FALSE	canonical	3	170	junction_3	17.1075032271418	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTCTCGTGGGTGAT	NA	False	NA	NA	False	NA	NA	NA	84629191	84640347	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_84629277_84633122_84633219_84636680_84636868_84639348
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095740	chr2	+	681	3	FSM	ENSMUSG00000027076.11	ENSMUST00000028470.10	690	3	13	-4	13	4	multi-exon	FALSE	canonical	3	373	junction_1	17.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCTTTACTTGAGAGTAA	6430	False	NA	14	True	ATTAAA	-19	NA	84657353	84660561	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_84657492_84657942_84658058_84660133
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095744	chr2	+	234	1	ISM	ENSMUSG00000027076.11	ENSMUST00000028470.10	690	3	2983	0	2596	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGTGTCTTTACTTGAGA	1250	False	NA	10	True	ATTAAA	-15	NA	84660323	84660557	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_+_84660300_84660600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095769	chr2	+	2614	13	FSM	ENSMUSG00000027074.15	ENSMUST00000090726.6	2583	13	-31	0	-13	0	multi-exon	FALSE	canonical	3	20	junction_9	6.42693982821961	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGCTTCTACCTCTTTG	NA	False	NA	9	True	AATAAA	-20	NA	84766976	84788853	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_84767194_84767866_84768214_84768566_84768697_84771324_84771372_84774585_84774663_84774861_84774955_84777183_84777324_84778678_84778777_84780316_84780536_84780764_84780885_84785774_84785962_84786615_84786731_84788029
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095802	chr2	+	2736	17	FSM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	-9	-6	-9	3	multi-exon	FALSE	canonical	3	121	junction_1	374.603436149483	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTATGTCTCCTTTCC	NA	False	NA	26	True	AATAAA	-22	NA	84867785	84877456	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_84867875_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095808	chr2	+	2999	16	ISM	ENSMUSG00000027067.17	ENSMUST00000077798.13	2739	17	208	-3	-9	3	3prime_fragment	FALSE	canonical	3	1260	junction_6	129.702223059848	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTATGTCTCCTTTCC	NA	False	NA	26	True	AATAAA	-22	NA	84867785	84877456	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_+_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095829	chr2	+	5735	12	NIC	ENSMUSG00000033955.14	novel	5885	10	NA	NA	-11	1	combination_of_known_splicesites	FALSE	canonical	3	133	junction_1	44.7158152361265	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCCAGGATTGTGGTGT	NA	False	NA	9	True	AATAAA	-18	NA	84878387	84903389	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_84878480_84881204_84881318_84882268_84882900_84884626_84884697_84888469_84889832_84892231_84894361_84900331_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84902940
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095832	chr2	+	5726	12	NIC	ENSMUSG00000033955.14	novel	5885	10	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	65.513735863381	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCCAGGATTGTGGTGT	NA	False	NA	9	True	AATAAA	-18	NA	84878392	84903389	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_84878480_84881208_84881318_84882268_84882900_84884626_84884697_84888469_84889832_84892231_84894361_84900331_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84902940
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095839	chr2	-	183	1	Intergenic	novelGene_2978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATATGTTTCCTGATA	NA	False	NA	NA	False	NA	NA	NA	85492775	85492592	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_85492600_85492800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095849	chr2	-	184	1	Intergenic	novelGene_2979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAGAAAGAGCTAG	NA	False	NA	NA	False	NA	NA	NA	87353264	87353080	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_87353100_87353300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095858	chr2	-	185	1	Intergenic	novelGene_2980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAAATTTCAACTCTCAG	NA	False	NA	NA	False	NA	NA	NA	87355894	87355709	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_87355700_87355900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095862	chr2	+	750	1	FSM	ENSMUSG00000082908.5	ENSMUST00000119272.2	253	1	-116	-381	-116	381	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTAAGGAGTCTACCTG	NA	False	NA	NA	False	AATAAA	-43	NA	87356372	87357122	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_87356400_87357100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095869	chr2	+	201	1	Intergenic	novelGene_2981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACCTATTCAGTACTAAT	NA	False	NA	NA	False	NA	NA	NA	87551964	87552165	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_87552000_87552200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095873	chr2	-	185	1	Intergenic	novelGene_2982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATAGTAAAAAATATCATG	NA	False	NA	NA	False	NA	NA	NA	87649963	87649778	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_87649800_87650000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095875	chr2	+	191	1	Intergenic	novelGene_2983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTTGCATGCTTCCAAG	6463	False	NA	NA	False	NA	NA	NA	88247867	88248058	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_88247900_88248100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095880	chr2	+	210	1	Intergenic	novelGene_2984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTCAGTCGCTGAGCGC	NA	False	NA	NA	False	AATAAA	-10	NA	90203310	90203520	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_90203300_90203500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095891	chr2	+	8582	36	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	2156	-3511	2156	3511	3prime_fragment	FALSE	canonical	3	459	junction_11	64.3521941969284	345	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCTTCGTGGTTTATAT	NA	False	NA	NA	False	AATAAA	-1	NA	90509714	90570183	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095902	chr2	+	1510	9	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	2177	42081	2177	8	internal_fragment	FALSE	canonical	3	521	junction_6	48.3806521245839	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTATGATTATTTGAAAC	NA	False	NA	NA	False	AATAAA	-19	NA	90509735	90524591	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095904	chr2	+	5047	36	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2177	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_33	108.152900080943	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTATATTAAGATTTAT	NA	False	NA	16	True	AATAAA	-18	NA	90509735	90566672	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563127_90563251_90563449_90563555_90565758
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095919	chr2	+	4514	17	FSM	ENSMUSG00000008200.16	ENSMUST00000238890.2	4691	17	177	0	-57	0	multi-exon	FALSE	canonical	3	117	junction_11	64.7446909020346	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGTCTTGATTAGCAG	NA	False	NA	18	True	AATAAA	-22	NA	90575890	90611365	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598859_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095928	chr2	+	4028	18	NIC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-14	-546	combination_of_known_junctions	FALSE	canonical	3	33	junction_12	87.2084167868991	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTATCCTTTTGCTCTT	NA	False	NA	11	True	AATAAA	-20	NA	90575933	90610819	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598196_90598300_90598859_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095932	chr2	+	174	1	Intergenic	novelGene_2985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAATTTCTTTTTTTTTTT	7566	False	NA	NA	False	NA	NA	NA	90587058	90587232	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_90587100_90587200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095934	chr2	-	206	1	Intergenic	novelGene_2986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTTATACTTTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	90617412	90617206	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_90617200_90617400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095943	chr2	+	185	1	Intergenic	novelGene_2987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGCCTCATTGTTGTTA	NA	False	NA	NA	False	NA	NA	NA	90668533	90668718	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_90668500_90668700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095964	chr2	+	2334	12	FSM	ENSMUSG00000027282.18	ENSMUST00000111467.4	2281	12	-51	-2	-9	2	multi-exon	FALSE	canonical	3	421	junction_3	644.761587047671	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCTTAGCCTGCTGCTT	163	False	NA	9	True	NA	NA	NA	90677565	90696986	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095977	chr2	-	948	7	FSM	ENSMUSG00000005510.10	ENSMUST00000005647.4	1046	7	106	-8	-19	6	multi-exon	FALSE	canonical	3	1877	junction_6	40.2105569333339	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGGTGGTTGTTTTTT	NA	False	NA	-3	True	AATAAA	-24	NA	90735065	90724971	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_90725222_90728727_90728848_90728980_90729107_90732706_90732857_90733190_90733289_90734766_90734833_90734927
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095984	chr2	-	2693	5	NIC	ENSMUSG00000005510.10	novel	1046	7	NA	NA	-20	0	intron_retention	FALSE	canonical	3	1877	junction_4	26.2963875846094	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTTCCTCTGTGGTGGT	NA	False	NA	-11	True	AATAAA	-16	NA	90735006	90724979	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_90725222_90728727_90728848_90728980_90729107_90732706_90734833_90734927
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000095991	chr2	+	2418	4	FSM	ENSMUSG00000005505.13	ENSMUST00000090682.4	2437	4	19	0	-7	0	multi-exon	FALSE	canonical	3	67	junction_2	4.10960933531265	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTCTGTGTTGACT	2357	False	NA	NA	False	AATAAA	-42	NA	90735105	90740905	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_90735254_90736009_90736628_90737888_90737996_90739360
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096014	chr2	+	4597	14	NIC	ENSMUSG00000005506.17	novel	4678	14	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	280	junction_7	133.754300931789	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2393	False	NA	15	True	ATTAAA	-15	NA	90770817	90849842	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096020	chr2	+	4609	14	FSM	ENSMUSG00000005506.17	ENSMUST00000111451.10	4678	14	77	-8	16	1	multi-exon	FALSE	canonical	3	395	junction_7	113.564516501784	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTCTTCTGCGTTGTC	2394	False	NA	16	True	ATTAAA	-16	NA	90770818	90849843	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096036	chr2	+	4759	15	FSM	ENSMUSG00000005506.17	ENSMUST00000005643.14	4830	15	78	-7	17	0	multi-exon	FALSE	canonical	3	193	junction_2	185.405677653416	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2395	False	NA	15	True	ATTAAA	-15	NA	90770819	90849842	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096052	chr2	+	4595	14	NIC	ENSMUSG00000005506.17	novel	4432	13	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	185	junction_9	174.629345426316	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2398	False	NA	15	True	ATTAAA	-15	NA	90770822	90849842	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096071	chr2	+	4650	15	NIC	ENSMUSG00000005506.17	novel	7806	15	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	239.576624869108	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2405	False	NA	15	True	ATTAAA	-15	NA	90770829	90849842	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_90770987_90784633_90784687_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096079	chr2	+	7659	14	NIC	ENSMUSG00000005506.17	novel	7614	14	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	3	151	junction_13	182.048826274516	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2406	False	NA	15	True	ATTAAA	-15	NA	90770830	90849842	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096115	chr2	+	1620	8	FSM	ENSMUSG00000002104.12	ENSMUST00000050323.6	1606	8	-14	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	10.5791477608992	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGTGATTCTGACCCTT	NA	False	NA	7	True	AATAAA	-15	NA	90865971	90876074	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_90866334_90866891_90867231_90872198_90872358_90873304_90873404_90873484_90873608_90874035_90874090_90875184_90875385_90875790
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096124	chr2	+	1641	12	FSM	ENSMUSG00000002102.16	ENSMUST00000067663.14	1636	12	4	-9	4	7	multi-exon	FALSE	canonical	3	1724	junction_1	113.356309451931	468	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCAGCCTCTGTGGACT	NA	False	NA	27	True	AATAAA	-28	NA	90884357	90889786	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90887406_90888109_90888207_90888354_90888501_90889390_90889473_90889598
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096134	chr2	-	2379	10	FSM	ENSMUSG00000002105.16	ENSMUST00000073575.12	2469	10	90	0	-29	0	multi-exon	FALSE	canonical	3	29	junction_7	9.55684745788763	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTTCCACATACTAGG	4257	False	NA	0	True	AATAAA	-15	NA	90900672	90892135	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_90893324_90893408_90893509_90893664_90893798_90894000_90894052_90895059_90895150_90895250_90895353_90895926_90896046_90896357_90896472_90898775_90899085_90900499
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096150	chr2	+	4648	11	FSM	ENSMUSG00000002103.17	ENSMUST00000239169.2	4652	11	2	2	2	-2	multi-exon	FALSE	canonical	3	45	junction_7	11.5134703716994	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCTGGTAAAGACTTATT	5062	False	NA	5	True	NA	NA	NA	91033258	91044440	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_91033394_91033945_91034042_91034584_91034672_91036100_91036254_91036354_91036454_91036532_91036623_91037061_91037195_91038161_91038245_91038384_91038492_91038605_91038782_91040951
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096162	chr2	-	1811	10	FSM	ENSMUSG00000002109.15	ENSMUST00000028696.5	1557	10	23	-277	1	-7	multi-exon	FALSE	canonical	3	56	junction_8	17.7888854188351	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAAAGCCCAACAGGGTT	3020	False	NA	-33	True	AATAAA	-28	NA	91067304	91041923	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_91042358_91042624_91042671_91042794_91042960_91047010_91047154_91047397_91047576_91047651_91047752_91049088_91049235_91064452_91064645_91065159_91065297_91067034
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096182	chr2	+	189	1	Intergenic	novelGene_2988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGAGAAAATCTGGCATG	NA	False	NA	NA	False	NA	NA	NA	91068216	91068405	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_91068200_91068400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096211	chr2	-	1625	9	FSM	ENSMUSG00000040591.19	ENSMUST00000102594.11	1977	9	-61	413	1	1	multi-exon	TRUE	canonical	3	72	junction_5	19.7673974007708	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGAGTCTAAAGCCAGT	NA	False	NA	-6	True	AATAAA	-19	NA	91275048	91108587	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_91109303_91109534_91109599_91112090_91112201_91112809_91113006_91114579_91114666_91135093_91135179_91214073_91214205_91252210_91252314_91274913
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096218	chr2	-	227	1	Intergenic	novelGene_2989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	364	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGACGGAGTCTCTCATT	2165	False	NA	NA	False	NA	NA	NA	91200503	91200276	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_91200300_91200500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096231	chr2	-	214	1	Intergenic	novelGene_2990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGGACACACTGCGTGT	6276	False	NA	NA	False	NA	NA	NA	91249764	91249550	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_91249600_91249800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096238	chr2	+	181	1	Intergenic	novelGene_2991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATAAGCTCAATTCA	NA	False	NA	NA	False	NA	NA	NA	91252879	91253060	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_91252900_91253100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096253	chr2	+	6668	44	FSM	ENSMUSG00000040549.17	ENSMUST00000111338.10	6665	44	12	-15	12	15	multi-exon	TRUE	canonical	3	508	junction_5	59.4884084586321	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGGGAGTTCTGGGCA	NA	False	NA	26	True	AATAAA	-31	NA	91357118	91451024	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096269	chr2	+	135	1	Intergenic	novelGene_2992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTTTCAAAACCTATGCA	NA	False	NA	NA	False	NA	NA	NA	91468326	91468461	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_91468300_91468500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096291	chr2	+	2879	14	NNC	ENSMUSG00000027247.17	novel	2866	14	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	98.2376661635161	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTTGGCTGTTTAGGAA	NA	False	NA	NA	False	AATAAA	-18	NA	91480555	91502670	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_91480598_91482108_91482169_91484387_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096292	chr2	+	2850	14	FSM	ENSMUSG00000027247.17	ENSMUST00000111329.8	3201	14	351	0	-11	0	multi-exon	FALSE	canonical	3	195	junction_1	49.9501526672271	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTGGCTGTTTAGGAAG	NA	False	NA	NA	False	AATAAA	-19	NA	91480555	91502671	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_91480598_91482108_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096297	chr2	+	2788	13	FSM	ENSMUSG00000027247.17	ENSMUST00000111331.9	2883	13	94	1	-10	-1	multi-exon	FALSE	canonical	3	77	junction_1	81.5357368819887	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTTGGCTGTTTAGGAA	NA	False	NA	NA	False	AATAAA	-18	NA	91480556	91502670	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_91480598_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096302	chr2	+	2857	14	NNC	ENSMUSG00000027247.17	novel	3201	14	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	87.3500066894048	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTTGGCTGTTTAGGAA	NA	False	NA	NA	False	AATAAA	-18	NA	91480562	91502670	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_91480598_91482093_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096332	chr2	-	3543	16	FSM	ENSMUSG00000027244.15	ENSMUST00000076803.12	3551	16	8	0	8	0	multi-exon	TRUE	canonical	3	217	junction_4	20.2170445141937	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCCTATTCCAAATGTCT	NA	False	NA	0	True	AATAAA	-20	NA	91540913	91504962	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096342	chr2	-	3450	15	NIC	ENSMUSG00000027244.15	novel	3551	16	NA	NA	21	-1	combination_of_known_junctions	FALSE	canonical	3	44	junction_3	59.708176379208	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTTCCTATTCCAAATGT	NA	False	NA	-2	True	AATAAA	-18	NA	91540900	91504964	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096372	chr2	+	5007	19	FSM	ENSMUSG00000040506.17	ENSMUST00000099712.10	5021	19	14	0	10	0	multi-exon	FALSE	canonical	3	41	junction_7	21.1640418320005	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTCCTGCTTATTTCT	NA	False	NA	7	True	ATTAAA	-19	NA	91560492	91749194	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91602783_91603055_91604093_91635368_91635456_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096381	chr2	+	5261	18	FSM	ENSMUSG00000040506.17	ENSMUST00000045705.14	5203	18	-58	0	-15	0	multi-exon	FALSE	canonical	3	82	junction_5	14.4832560525026	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTCCTGCTTATTTCT	NA	False	NA	7	True	ATTAAA	-19	NA	91560511	91749194	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91604093_91635368_91635456_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096390	chr2	-	217	1	Intergenic	novelGene_2993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGACCTTGATATGTTGA	NA	False	NA	NA	False	NA	NA	NA	91564975	91564758	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_91564800_91565000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096400	chr2	+	190	1	Intergenic	novelGene_2994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATGATTCTTTAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	91577897	91578087	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_91577900_91578100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096401	chr2	+	216	1	Intergenic	novelGene_2995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGATTGACTGTTCTTC	4972	False	NA	NA	False	NA	NA	NA	91591141	91591357	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_91591100_91591400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096406	chr2	-	192	1	Intergenic	novelGene_2996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGATTCCTAAATTTA	3632	False	NA	NA	False	NA	NA	NA	91632828	91632636	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_91632600_91632800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096410	chr2	-	190	1	Intergenic	novelGene_2997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATTCAACAAAAATTTTAA	6151	False	NA	NA	False	NA	NA	NA	91643876	91643686	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_91643700_91643900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096415	chr2	+	2777	2	Genic_Genomic	ENSMUSG00000040495.5	novel	1440	1	NA	NA	-5063	1147	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTTATTTTATTCATT	NA	False	NA	NA	False	ATTAAA	-24	NA	91752530	91760180	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr2_+_91752689_91757561
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096428	chr2	-	896	5	FSM	ENSMUSG00000027239.15	ENSMUST00000090602.6	714	5	-37	-145	-37	7	multi-exon	FALSE	canonical	3	492	junction_4	939.630878324036	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCTTTTTTAATATATAA	NA	False	NA	NA	False	AATAAA	-26	NA	91762081	91760165	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716_91761794_91761878
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096476	chr2	+	191	1	Intergenic	novelGene_2998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTATTTAGTTATTTCAT	1442	False	NA	NA	False	NA	NA	NA	91965316	91965507	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_91965300_91965500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096481	chr2	+	211	1	Intergenic	novelGene_2999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACACCCTGGGCTGGAGA	4560	False	NA	NA	False	NA	NA	NA	91968434	91968645	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_91968400_91968600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096489	chr2	-	221	1	Intergenic	novelGene_3000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATCCAGACAACTAACTA	NA	False	NA	NA	False	AAAAAG	-13	NA	92037870	92037649	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_92037600_92037900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096499	chr2	+	196	1	Intergenic	novelGene_3001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGCGTGGTGGCGCACG	NA	False	NA	NA	False	NA	NA	NA	92141928	92142124	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_92141900_92142100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096503	chr2	+	179	1	Intergenic	novelGene_3002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAGTGGGGGGGAGGA	NA	False	NA	NA	False	NA	NA	NA	92158957	92159136	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_92159000_92159100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096507	chr2	-	2457	15	FSM	ENSMUSG00000040434.17	ENSMUST00000068586.13	2445	15	-12	0	-12	0	multi-exon	FALSE	canonical	0	0	junction_10	34.8762389144289	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGAGTGTTTTGTCTGT	NA	False	NA	0	True	NA	NA	NA	92201414	92195390	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92199718_92199834_92200007_92200204_92200329_92200521_92200605_92200910_92201009_92201083_92201239_92201325
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096547	chr2	-	4011	12	FSM	ENSMUSG00000068742.12	ENSMUST00000090559.12	3976	12	-35	0	-35	0	multi-exon	FALSE	canonical	3	83	junction_5	10.1019595513375	184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTGTGTAATCTATCT	NA	False	NA	NA	False	AGTAAA	-2	NA	92264423	92233990	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244293_92246498_92246640_92252506_92252596_92253222_92253408_92254889_92255033_92257246_92257356_92264156
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096565	chr2	-	3120	2	FSM	ENSMUSG00000049922.9	ENSMUST00000067631.7	3139	2	19	0	19	0	multi-exon	FALSE	canonical	3	54	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGATACAGCATGTTTTAT	NA	False	NA	NA	False	AATAAA	-24	NA	92290120	92283108	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_92285120_92289011
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096571	chr2	-	180	1	Intergenic	novelGene_3003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAGAGAGAGAGAGAGAG	381	False	NA	NA	False	NA	NA	NA	92460105	92459925	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_92459900_92460100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096584	chr2	+	2845	8	NIC	ENSMUSG00000068735.15	novel	2703	8	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	62	junction_2	86.7591082085498	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGTGGTGTCCTGTTTT	NA	False	NA	18	True	NA	NA	NA	93017895	93032102	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_93018093_93027241_93027324_93027806_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096593	chr2	+	2684	8	FSM	ENSMUSG00000068735.15	ENSMUST00000111266.8	2703	8	17	2	4	0	multi-exon	FALSE	canonical	3	75	junction_2	82.3119997699148	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGTGGTGTCCTGTTTT	NA	False	NA	18	True	NA	NA	NA	93017909	93032102	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_93018093_93027241_93027324_93027953_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096595	chr2	+	2681	8	FSM	ENSMUSG00000068735.15	ENSMUST00000090554.11	2654	8	-19	-8	4	0	multi-exon	FALSE	canonical	3	171	junction_2	50.0424309757148	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGTGGTGTCCTGTTTT	NA	False	NA	18	True	NA	NA	NA	93017909	93032102	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_93018093_93027241_93027324_93027956_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096625	chr2	-	2889	14	FSM	ENSMUSG00000027198.17	ENSMUST00000028623.13	2871	14	-12	-6	-12	6	multi-exon	TRUE	canonical	3	390	junction_9	31.3157237855525	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGAATGCTGGTTCTTGG	NA	False	NA	-5	True	ATTAAA	-25	NA	93652925	93525969	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93652731
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096645	chr2	-	2777	13	NIC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	-5	-1	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	114.321519068906	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGTCTAGAATGCTGG	NA	False	NA	-12	True	ATTAAA	-18	NA	93652903	93525976	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_93526617_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93652731
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096652	chr2	-	82	1	ISM	ENSMUSG00000027198.17	ENSMUST00000028623.13	2871	14	126854	2	8795	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGTCTAGAATGCTG	NA	False	NA	-13	True	ATTAAA	-17	NA	93526059	93525977	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_-_93526000_93526100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096665	chr2	-	2365	15	NNC	ENSMUSG00000075023.12	novel	2224	15	NA	NA	-61386	0	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_14	11.1785143768512	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCAGGCCTGCTTTATTT	NA	False	NA	-1	True	AATAAA	-22	NA	93760888	93685706	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_-_93686126_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93760610
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096666	chr2	-	3019	15	NIC	ENSMUSG00000075023.12	novel	2224	15	NA	NA	-213	0	intron_retention	FALSE	canonical	1	2	junction_14	23.4539279161056	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCAGGCCTGCTTTATTT	NA	False	NA	-1	True	AATAAA	-22	NA	93699715	93685706	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_93686126_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93698783
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096681	chr2	-	1293	1	FSM	ENSMUSG00000087006.4	ENSMUST00000148314.3	1240	1	-53	0	-53	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCCGGGCTTTGGACTT	NA	False	NA	-3	True	AATAAA	-23	NA	93787447	93786154	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_93786200_93787400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096714	chr2	+	205	1	Intergenic	novelGene_3004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATCAAGGGAAGGTTTTA	NA	False	NA	NA	False	NA	NA	NA	94042083	94042288	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_94042100_94042300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096721	chr2	-	4587	25	FSM	ENSMUSG00000027194.17	ENSMUST00000111238.8	4590	25	5	-2	4	2	multi-exon	TRUE	canonical	3	116	junction_1	40.2833497103814	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGGTGTAGTTTTTCTT	NA	False	NA	0	True	AATAAA	-23	NA	94237029	94131109	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_94132213_94133889_94134034_94135288_94135409_94153433_94153518_94154706_94154867_94157042_94157164_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096732	chr2	-	3520	20	FSM	ENSMUSG00000027194.17	ENSMUST00000094801.5	3408	20	4	-116	4	116	multi-exon	FALSE	canonical	3	95	junction_1	34.6292592408193	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGCCTGTACCTCAAAT	NA	False	NA	NA	False	ATTAAA	-14	NA	94237029	94158165	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_94158831_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096741	chr2	+	192	1	Intergenic	novelGene_3005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAGTGCCGAGAACAGCA	NA	False	NA	NA	False	NA	NA	NA	94184635	94184827	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_94184600_94184800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096756	chr2	-	3713	14	FSM	ENSMUSG00000027193.13	ENSMUST00000028617.7	3736	14	-22	45	-22	-45	multi-exon	FALSE	canonical	3	777	junction_1	163.356364354585	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTCTTAATGTGTTA	NA	False	NA	-1	True	AATAAA	-19	NA	94268503	94242071	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_94244127_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096761	chr2	-	3717	14	NNC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	-21	-45	at_least_one_novel_splicesite	FALSE	canonical	3	565	junction_1	211.688282609319	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTCTTAATGTGTTA	NA	False	NA	-1	True	AATAAA	-19	NA	94268502	94242071	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_-_94244132_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096773	chr2	+	214	1	Intergenic	novelGene_3006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAATGCATCATGGTTTTA	NA	False	NA	NA	False	NA	NA	NA	99828847	99829061	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_99828800_99829100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096784	chr2	-	274	1	Intergenic	novelGene_3007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTATTAAGAAATAGAAAT	NA	False	NA	NA	False	AATAAA	-19	NA	101499954	101499680	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_101499700_101500000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096786	chr2	+	5482	8	FSM	ENSMUSG00000027164.9	ENSMUST00000004949.8	6169	8	-11	698	0	-698	multi-exon	FALSE	canonical	3	72	junction_2	13.2603444409969	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGAGTTGTAGTTTTTC	NA	False	NA	NA	False	TTTAAA	-44	NA	101508773	101531316	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_101508966_101511169_101511373_101514823_101515142_101518808_101518960_101520400_101520560_101521772_101521845_101524599_101524678_101527007
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096803	chr2	+	1194	6	FSM	ENSMUSG00000027163.14	ENSMUST00000028584.8	1191	6	-3	0	-3	0	multi-exon	FALSE	canonical	3	160	junction_2	9.72830920561225	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGCTGGTCGTGGTTCTT	NA	False	NA	29	True	AATAAA	-25	NA	101716594	101731991	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_101716665_101725479_101725606_101727384_101727525_101729212_101729248_101730213_101730318_101731272
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096813	chr2	-	3848	6	FSM	ENSMUSG00000048058.18	ENSMUST00000058790.12	3833	6	-13	-2	-13	2	multi-exon	FALSE	canonical	3	53	junction_4	7.56306816047562	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGTGTGAATGGTTCTTA	NA	False	NA	0	True	AATAAA	-20	NA	102016743	101780545	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_101783521_101785173_101785520_101888251_101888387_101900277_101900404_101943877_101944025_102016624
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096826	chr2	+	199	1	Intergenic	novelGene_3008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCCAGAGGAGTTTAGG	NA	False	NA	NA	False	NA	NA	NA	102031507	102031706	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_102031500_102031700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096834	chr2	-	5908	5	FSM	ENSMUSG00000027189.17	ENSMUST00000102573.8	5612	5	-296	0	-296	0	multi-exon	FALSE	canonical	3	89	junction_4	8.0156097709407	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTCTCAGAGTTGTTC	NA	False	NA	0	True	AATAAA	-19	NA	102231541	102130463	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_102134850_102177308_102177329_102187761_102188002_102211208_102211287_102230357
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096841	chr2	-	2401	3	ISM	ENSMUSG00000027189.17	ENSMUST00000102573.8	5612	5	-295	56398	-295	926	5prime_fragment	FALSE	canonical	3	89	junction_2	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTGAGCATGTCTATTG	NA	False	NA	NA	False	AATAAA	-19	NA	102231540	102186861	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_-_102188002_102211208_102211287_102230357
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096847	chr2	+	191	1	Intergenic	novelGene_3009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGCTAAGAGTCTAGGG	3640	False	NA	NA	False	NA	NA	NA	102291026	102291217	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_102291000_102291200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096849	chr2	-	176	1	Intergenic	novelGene_3010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAACCACTATATTCTG	NA	False	NA	NA	False	NA	NA	NA	102293036	102292860	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_102292900_102293000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096855	chr2	-	2506	11	FSM	ENSMUSG00000010914.11	ENSMUST00000011058.9	2506	11	6	-6	6	6	multi-exon	FALSE	canonical	3	314	junction_1	20.370567002418	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGACATGCAAAATAGAAG	NA	False	NA	NA	False	AATAAA	-21	NA	102903852	102851413	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_102852615_102854509_102854575_102858620_102858780_102860622_102860682_102863507_102863656_102865559_102865735_102871387_102871487_102872538_102872739_102877065_102877167_102888841_102888923_102903634
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096873	chr2	-	215	1	Intergenic	novelGene_3011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTTTGCTGTATATATT	8873	False	NA	NA	False	NA	NA	NA	102914860	102914645	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_102914600_102914900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096881	chr2	-	2483	13	FSM	ENSMUSG00000027187.11	ENSMUST00000028610.10	2613	13	-19	149	-19	-149	multi-exon	FALSE	canonical	3	472	junction_10	47.7368364636321	323	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTTGGTTGCTTTCAGC	NA	False	NA	-4	True	AATAAA	-20	NA	103315524	103284342	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_103285167_103285422_103285507_103287194_103287303_103290586_103290718_103293631_103293771_103297421_103297575_103298038_103298231_103300643_103300770_103302110_103302216_103303295_103303427_103304674_103304786_103307093_103307266_103315317
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096893	chr2	+	4556	17	FSM	ENSMUSG00000032724.6	ENSMUST00000076212.4	4558	17	2	0	2	0	multi-exon	FALSE	canonical	2	10	junction_9	4.07546009672528	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGGCATCTGCTCCTGG	NA	False	NA	2	True	AATAAA	-16	NA	103396656	103548768	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_103397955_103509089_103509237_103513622_103513837_103531115_103531269_103532600_103532767_103535397_103535488_103535975_103536078_103537921_103538019_103538424_103538561_103539624_103539852_103541020_103541200_103541492_103541599_103541789_103541893_103542731_103542823_103545847_103545917_103546384_103546499_103547504
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096901	chr2	+	199	1	Intergenic	novelGene_3012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTCTTTAAGGACTTGTT	8329	False	NA	NA	False	NA	NA	NA	103447720	103447919	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_103447700_103447900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096909	chr2	-	3873	29	FSM	ENSMUSG00000027185.16	ENSMUST00000028608.13	3879	29	6	0	-3	0	multi-exon	FALSE	canonical	3	271	junction_25	29.5459474413003	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCCTGCAGTGCCTATAA	NA	False	NA	-9	True	AATAAA	-20	NA	103591609	103551600	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096925	chr2	-	4112	19	FSM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	-11	2068	-11	9	multi-exon	FALSE	canonical	3	761	junction_18	276.654863648277	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGTTATGGTACATCA	NA	False	NA	-2	True	AATAAA	-26	NA	103628005	103595353	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096941	chr2	-	1841	1	ISM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	30796	2072	4940	5	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	8668	False	NA	-6	True	AATAAA	-22	NA	103597198	103595357	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_-_103595400_103597200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096960	chr2	-	3554	18	ISM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	-9	4166	-9	0	5prime_fragment	FALSE	canonical	3	761	junction_17	279.160307903274	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAGTACTGGTGGAAT	NA	False	NA	-9	True	NA	NA	NA	103628003	103597451	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096963	chr2	-	3499	17	ISM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	23	2089	23	0	5prime_fragment	FALSE	canonical	3	1726	junction_3	108.266742354243	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAGTACTGGTGGAAT	NA	False	NA	-9	True	NA	NA	NA	103627426	103597451	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096981	chr2	+	208	1	Intergenic	novelGene_3013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAGGAAGTGTGAGAAGG	5103	False	NA	NA	False	NA	NA	NA	103611537	103611745	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_103611500_103611700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000096990	chr2	-	184	1	Intergenic	novelGene_3014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAAGAAAATCCCT	NA	False	NA	NA	False	NA	NA	NA	103663038	103662854	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_103662900_103663000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097008	chr2	+	2889	11	FSM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	113	1738	-10	-1501	multi-exon	FALSE	canonical	3	178	junction_10	68.8773547691838	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCTACTGCTTATTAA	NA	False	NA	15	True	ATTAAA	-28	NA	103858178	103891847	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097015	chr2	+	3742	10	FSM	ENSMUSG00000027180.13	ENSMUST00000102565.4	3720	10	-26	4	-10	-4	multi-exon	FALSE	canonical	3	344	junction_6	33.1058907144937	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTGTATTTATTTATTT	NA	False	NA	10	True	NA	NA	NA	103858178	103887845	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097048	chr2	+	1491	4	NNC	ENSMUSG00000086454.8	novel	770	3	NA	NA	-5	116	at_least_one_novel_splicesite	FALSE	canonical	3	184	junction_1	171.663106759205	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCTGTGTTAATGTCAT	NA	False	NA	28	True	AAGAAA	-24	NA	104389518	104399293	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_104389830_104390068_104390321_104398205_104398836_104398995
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097066	chr2	+	1185	4	NNC	ENSMUSG00000086454.8	novel	536	3	NA	NA	-2	96	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	198.704694347052	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGAAGTTTCCACTTGAA	NA	False	NA	8	True	AAGAAA	-4	NA	104389526	104399273	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_104389552_104390068_104390321_104398205_104398836_104398995
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097072	chr2	+	1225	4	NNC	ENSMUSG00000086454.8	novel	536	3	NA	NA	-2	93	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	214.187353086549	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTAGAAGTTTCCACTT	NA	False	NA	5	True	AAGAAA	-1	NA	104389526	104399270	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_104389595_104390068_104390321_104398205_104398836_104398995
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097089	chr2	+	1855	2	FSM	ENSMUSG00000086454.8	ENSMUST00000127237.2	707	2	-277	-871	-2	89	multi-exon	FALSE	canonical	3	577	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAGCTAGAAGTTTCC	NA	False	NA	1	True	NA	NA	NA	104389526	104399266	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_104390321_104398205
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097102	chr2	+	2852	21	FSM	ENSMUSG00000027176.9	ENSMUST00000028599.8	2817	21	-39	4	-39	-4	multi-exon	TRUE	canonical	3	179	junction_7	45.0891062231222	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCCTCCTGTTTCTTTG	6861	False	NA	15	True	AATAAA	-16	NA	104420828	104495770	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_104421048_104439215_104439318_104439435_104439532_104474633_104474667_104475323_104475422_104476744_104476812_104476953_104476989_104477068_104477196_104478514_104478593_104479797_104479961_104481986_104482097_104482789_104482907_104483348_104483424_104484505_104484650_104486033_104486137_104489610_104489681_104490863_104491060_104493638_104493793_104494413_104494509_104494641_104494703_104495061
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097115	chr2	+	194	1	Intergenic	novelGene_3015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATAAAATGACATTCTA	NA	False	NA	NA	False	NA	NA	NA	104438895	104439089	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_104438900_104439100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097125	chr2	-	183	1	Intergenic	novelGene_3016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATATATTCAAAGATAATC	9725	False	NA	NA	False	NA	NA	NA	104484037	104483854	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_104483900_104484000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097127	chr2	-	1760	9	FSM	ENSMUSG00000027173.8	ENSMUST00000028595.8	1801	9	47	-6	47	6	multi-exon	FALSE	canonical	3	114	junction_7	14.7394029729837	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGAATGGTGTGTTGCTG	NA	False	NA	-3	True	AATAAA	-30	NA	104573176	104552122	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_104552464_104553220_104553300_104553383_104553510_104553652_104553796_104554914_104555127_104557466_104557657_104558427_104558556_104560528_104560920_104573026
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097139	chr2	+	205	1	Intergenic	novelGene_3017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCACATTTGAAGACACTAT	1921	False	NA	NA	False	TTTAAA	-13	NA	104561104	104561309	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_104561100_104561300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097149	chr2	-	5671	8	NNC	ENSMUSG00000074994.7	novel	9037	12	NA	NA	-234	-15185	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	22.6337295708355	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTTATTTTGTTGT	NA	False	NA	-5	True	AATAAA	-18	NA	104647339	104600324	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_-_104601021_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625532_104625640_104646944
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097158	chr2	+	178	1	Intergenic	novelGene_3018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCATTCATTGAGAGAGG	NA	False	NA	NA	False	NA	NA	NA	104717904	104718082	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_104717900_104718100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097166	chr2	-	232	1	Intergenic	novelGene_3019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTAAACTAGTTCATC	NA	False	NA	NA	False	AAGAAA	-6	NA	104758482	104758250	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_104758200_104758500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097172	chr2	-	222	1	Intergenic	novelGene_3020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGAATATAAGTT	NA	False	NA	NA	False	NA	NA	NA	104768056	104767834	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_104767800_104768100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097175	chr2	-	1306	11	FSM	ENSMUSG00000027170.13	ENSMUST00000028592.12	1283	11	-18	-5	-18	5	multi-exon	FALSE	canonical	3	1722	junction_10	235.400531010446	507	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATCTAGCTAATTATTTT	2622	False	NA	-11	True	AGTAAA	-22	NA	104847443	104829995	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097182	chr2	+	209	1	Intergenic	novelGene_3021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCACCTAGGAACATGTTT	NA	False	NA	NA	False	NA	NA	NA	105194906	105195115	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_105194900_105195100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097190	chr2	-	3398	6	FSM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	-335	-343	-335	343	multi-exon	FALSE	canonical	3	1454	junction_3	103.827549330609	620	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGTCATGGTGTTTT	NA	False	NA	0	True	NA	NA	NA	105229999	105216292	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105229314
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097208	chr2	-	2999	10	FSM	ENSMUSG00000027167.12	ENSMUST00000122965.8	3048	10	54	-5	-27	5	multi-exon	FALSE	canonical	3	175	junction_4	20.3548762623191	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTCTTACCCTGTTGTG	NA	False	NA	1	True	AATAAA	-35	NA	105734855	105531366	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_105533207_105622560_105622668_105624861_105624971_105639610_105639800_105644610_105644696_105662475_105662616_105672576_105672706_105696303_105696426_105727246_105727283_105734613
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097217	chr2	+	821	7	FSM	ENSMUSG00000042670.6	ENSMUST00000037499.6	955	7	0	134	0	-134	multi-exon	FALSE	canonical	3	400	junction_1	38.970073988468	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATGTTTTAAATATAAGA	NA	False	NA	20	True	AATAAA	-21	NA	105734982	105795769	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_105735076_105738668_105738775_105761063_105761198_105763609_105763699_105767336_105767464_105794524_105794636_105795608
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097234	chr2	-	3310	5	FSM	ENSMUSG00000027122.16	ENSMUST00000028536.13	3337	5	27	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	43.6863823176056	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGACTTACTGTTTATTA	NA	False	NA	NA	False	AATAAA	-19	NA	106804742	106792871	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_106795216_106795766_106795992_106797444_106797573_106799416_106799904_106804616
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097273	chr2	-	1882	6	FSM	ENSMUSG00000057234.10	ENSMUST00000081631.10	1894	6	10	2	0	1	multi-exon	FALSE	canonical	3	30	junction_4	7.25534285888682	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTATTTATTTATTTT	NA	False	NA	NA	False	AATAAA	-18	NA	109108625	108922643	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_108923643_108961829_108962009_108967685_108967878_109021896_109022034_109104733_109105021_109108537
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097284	chr2	+	4260	17	FSM	ENSMUSG00000027115.15	ENSMUST00000028527.8	3369	17	48	-939	-40	939	multi-exon	FALSE	canonical	3	273	junction_13	41.1567126967157	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAAATGCTATTGAGTCTG	1424	False	NA	NA	False	AATAAA	-27	NA	109111130	109173031	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109125482_109126964_109127142_109128419_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891_109141014_109148219_109148456_109163600_109164013_109164665_109164774_109168911_109169022_109171502
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097303	chr2	+	193	1	Intergenic	novelGene_3022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACCTCTAGCTCATTGGT	5614	False	NA	NA	False	NA	NA	NA	109699226	109699419	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_109699200_109699400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097308	chr2	+	4231	5	FSM	ENSMUSG00000027162.8	ENSMUST00000028583.8	4228	5	-3	0	-3	0	multi-exon	FALSE	canonical	3	354	junction_4	22.349496638627	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGGGGTAATGTGGTTG	NA	False	NA	31	True	AGTAAA	-21	NA	109721194	109731348	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_109721267_109724809_109724929_109725452_109725525_109726580_109726791_109727590
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097317	chr2	-	199	1	Intergenic	novelGene_3023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGTATTTATCTACAC	NA	False	NA	NA	False	NA	NA	NA	109731940	109731741	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_109731700_109731900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097329	chr2	+	5079	18	FSM	ENSMUSG00000050199.14	ENSMUST00000046548.14	5060	18	-19	0	-19	0	multi-exon	FALSE	canonical	3	53	junction_13	11.7799900717261	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTGAAAACTGTTTTTT	NA	False	NA	40	True	ATTAAA	-22	NA	109747972	109844602	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_109748651_109801036_109801109_109820049_109820122_109821448_109821521_109826898_109827115_109827937_109828010_109829750_109829820_109830640_109830713_109830904_109830977_109831274_109831344_109832810_109832883_109833798_109833865_109834895_109834968_109836848_109836921_109837489_109837616_109838429_109838546_109838926_109839011_109841595
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097336	chr2	+	2082	6	FSM	ENSMUSG00000027160.17	ENSMUST00000028580.12	2070	6	-3	-9	-3	3	multi-exon	FALSE	canonical	3	423	junction_3	38.5455574612691	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTTTTTTAGAAGTCAT	NA	False	NA	NA	False	AATAAA	-25	NA	109848158	109875670	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_109848560_109852226_109852360_109862676_109862785_109870918_109871078_109871605_109871748_109874531
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097346	chr2	+	194	1	Intergenic	novelGene_3024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAAAGCACTCCTATCCT	1926	False	NA	NA	False	AAAAAG	-2	NA	110733646	110733840	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_110733600_110733800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097352	chr2	+	214	1	Intergenic	novelGene_3025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAAGTATTAAGGTAGCC	NA	False	NA	NA	False	NA	NA	NA	111927804	111928018	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_111927800_111928000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097364	chr2	+	205	1	Intergenic	novelGene_3026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTCCACCACCATAAGG	NA	False	NA	NA	False	NA	NA	NA	112066798	112067003	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_112066800_112067000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097368	chr2	+	199	1	Intergenic	novelGene_3027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAGATGTGATGACACAT	NA	False	NA	NA	False	NA	NA	NA	112067615	112067814	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_112067600_112067800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097396	chr2	+	6035	25	FSM	ENSMUSG00000027130.16	ENSMUST00000053666.8	6060	25	29	-4	29	-3	multi-exon	FALSE	canonical	3	47	junction_1	14.1194679432336	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGTGCTGTAGTTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	112114950	112193505	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_112115151_112146585_112146631_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097401	chr2	-	980	5	FSM	ENSMUSG00000027131.4	ENSMUST00000028551.4	983	5	0	3	0	-3	multi-exon	FALSE	canonical	3	778	junction_3	24.5395089600424	248	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCACAAGTTCCCCTTC	4997	False	NA	-8	True	AATAAA	-26	NA	112198372	112193358	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_112193700_112194136_112194298_112194496_112194651_112197746_112197862_112198163
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097415	chr2	+	2901	10	FSM	ENSMUSG00000027132.4	ENSMUST00000028552.4	2886	10	-12	-3	-12	3	multi-exon	FALSE	canonical	3	424	junction_7	47.4201082523719	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGTGCATAGTTTACT	NA	False	NA	13	True	AATAAA	-23	NA	112209543	112244588	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097442	chr2	+	1452	6	FSM	ENSMUSG00000003604.15	ENSMUST00000003705.12	4735	6	-37	3320	-37	342	multi-exon	FALSE	canonical	3	555	junction_4	26.4227174983952	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTTTCCTTTCTTCAC	NA	False	NA	4	True	AATAAA	-15	NA	112323271	112461598	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_112323567_112344794_112344973_112455499_112455571_112458093_112458190_112460084_112460422_112461123
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097450	chr2	-	179	1	Intergenic	novelGene_3028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAGGTAAAGAATTCA	NA	False	NA	NA	False	NA	NA	NA	113023567	113023388	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_113023400_113023600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097459	chr2	-	5080	12	FSM	ENSMUSG00000041219.15	ENSMUST00000102545.8	4958	12	-68	-54	-63	0	multi-exon	FALSE	canonical	3	279	junction_2	47.4803134497789	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	5949	False	NA	-4	True	ATTAAA	-17	NA	113679069	113661836	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097506	chr2	+	233	1	Intergenic	novelGene_3029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTCATGAGCAATGAAAC	NA	False	NA	NA	False	NA	NA	NA	115942525	115942758	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_115942500_115942800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097515	chr2	+	6335	7	FSM	ENSMUSG00000027351.15	ENSMUST00000028829.13	6016	7	-319	0	-319	0	multi-exon	FALSE	canonical	3	100	junction_4	10.1557318243881	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTTTCTCACTTCTTCA	NA	False	NA	16	True	ATTAAA	-21	NA	116951535	117012760	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_116952238_116983472_116983648_116993978_116994148_116995426_116995477_117002408_117002568_117005824_117005927_117007782
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097521	chr2	+	302	1	Intergenic	novelGene_3030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGGAGGTGAACAAACC	NA	False	NA	NA	False	NA	NA	NA	118002794	118003096	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_118002800_118003100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097532	chr2	+	5219	39	FSM	ENSMUSG00000005102.14	ENSMUST00000005233.12	5212	39	-7	0	-7	0	multi-exon	FALSE	canonical	3	66	junction_24	13.8429307338417	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGTTTTCCATTTGCA	NA	False	NA	9	True	AATAAA	-15	NA	118219091	118305715	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_118219334_118231015_118231129_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605_118273708_118276740_118276795_118278756_118278994_118280790_118280867_118281892_118282015_118285308_118285359_118286256_118286426_118287606_118287724_118288306_118288373_118292207_118292379_118292704_118292840_118293144_118293253_118294426_118294556_118296833_118296921_118298642_118298756_118300724_118300784_118301316_118301415_118302370_118302440_118303122_118303168_118304512_118304632_118305483
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097535	chr2	+	2992	19	ISM	ENSMUSG00000005102.14	ENSMUST00000005233.12	5212	39	8	31964	8	-9020	5prime_fragment	FALSE	canonical	3	81	junction_8	8.9504810547317	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCGTATGGAGATCAGAA	NA	False	NA	5	True	AATACA	-16	NA	118219106	118273751	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_+_118219334_118231015_118231129_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097544	chr2	-	787	5	FSM	ENSMUSG00000009549.15	ENSMUST00000009693.15	798	5	13	-2	13	2	multi-exon	FALSE	canonical	3	1430	junction_1	23.7421039505769	234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTTTGTTTTTCTTGGT	NA	False	NA	0	True	ATTAAA	-18	NA	118310179	118306328	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_118306789_118307307_118307341_118309401_118309515_118309858_118309932_118310071
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097557	chr2	+	3672	23	FSM	ENSMUSG00000040084.10	ENSMUST00000038341.8	3668	23	0	-4	0	4	multi-exon	TRUE	canonical	3	422	junction_10	74.3091181573454	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGCTGGCAATTCATCTA	NA	False	NA	19	True	AATAAA	-20	NA	118428691	118472076	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097564	chr2	+	3628	23	NNC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	43	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_10	129.89442629871	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGCTGGCAATTCA	NA	False	NA	15	True	AATAAA	-16	NA	118428734	118472072	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453547_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097575	chr2	+	186	1	Intergenic	novelGene_3031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGGTTTGAAATAAAATTA	NA	False	NA	NA	False	NA	NA	NA	118484178	118484364	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_118484200_118484400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097584	chr2	+	3067	1	FSM	ENSMUSG00000074918.5	ENSMUST00000149978.2	3053	1	-14	0	-14	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGTAAGTTGGTCATT	NA	False	NA	4	True	AATACA	-20	NA	118576224	118579291	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_118576200_118579300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097591	chr2	+	195	1	Intergenic	novelGene_3032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAACCAAGCAGATAAAGAC	NA	False	NA	NA	False	NA	NA	NA	118584417	118584612	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_118584400_118584600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097613	chr2	+	1128	10	NNC	ENSMUSG00000027332.12	novel	3665	12	NA	NA	-34	313	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	69.6920917631333	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCCTGAGATCATAGAAC	NA	False	NA	NA	False	NA	NA	NA	118692474	118707760	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118707622
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097635	chr2	-	180	1	Intergenic	novelGene_3033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAGAGCAAGT	NA	False	NA	NA	False	NA	NA	NA	118840302	118840122	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_118840100_118840300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097662	chr2	+	183	1	Intergenic	novelGene_3034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATGTATACAGGTAA	NA	False	NA	NA	False	NA	NA	NA	118890331	118890514	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_118890300_118890500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097665	chr2	+	2346	10	FSM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	-195	1217	-181	865	multi-exon	FALSE	canonical	3	651	junction_5	89.2808026867762	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGGAAGAAAGCTCAAAAG	NA	False	NA	10	True	ATTAAA	-17	NA	118943092	118966554	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097676	chr2	+	178	1	Intergenic	novelGene_3035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAACTGCTAATGGGGA	NA	False	NA	NA	False	NA	NA	NA	118947160	118947338	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_118947200_118947300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097679	chr2	-	2217	13	FSM	ENSMUSG00000070730.12	ENSMUST00000094695.12	2249	13	35	-3	-35	3	multi-exon	TRUE	canonical	3	215	junction_12	29.1989107483291	186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGACTGTTTCTGTTA	NA	False	NA	NA	False	AATAAA	-22	NA	118987480	118967478	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_118968234_118968827_118968909_118969519_118969574_118969832_118969932_118970524_118970603_118970740_118970817_118973108_118973170_118976818_118976922_118977789_118978076_118983856_118984001_118984370_118984564_118986838_118987033_118987387
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097689	chr2	+	192	1	Intergenic	novelGene_3036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGGGGTGGCTAAAGAT	NA	False	NA	NA	False	NA	NA	NA	118973926	118974118	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_118973900_118974100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097695	chr2	-	1008	11	FSM	ENSMUSG00000034278.4	ENSMUST00000038439.4	1008	11	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_10	69.3010822426317	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTACTTTTCTTCCTCTTG	NA	False	NA	-4	True	AATAAA	-15	NA	119039276	119002980	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_119003167_119009832_119009944_119010365_119010447_119010967_119011046_119011406_119011451_119014079_119014177_119014397_119014484_119016176_119016265_119016509_119016569_119016826_119016897_119039168
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097705	chr2	+	192	1	Intergenic	novelGene_3037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCAGGGCTGGTGAGAT	NA	False	NA	NA	False	NA	NA	NA	119023167	119023359	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_119023200_119023400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097711	chr2	+	1640	11	FSM	ENSMUSG00000068580.12	ENSMUST00000090174.11	2008	11	369	-1	-9	1	multi-exon	FALSE	canonical	1	23	junction_1	26.2152627299442	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGATGTTTTTTCTGTCC	280	False	NA	9	True	NA	NA	NA	119039483	119047531	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_119039665_119040962_119041085_119041261_119041313_119041661_119041781_119041878_119042025_119042386_119042496_119045314_119045522_119045934_119046009_119046689_119046789_119046912_119047023_119047109
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097726	chr2	+	2275	11	FSM	ENSMUSG00000027315.14	ENSMUST00000028783.14	2273	11	-2	0	-2	0	multi-exon	TRUE	canonical	3	163	junction_1	46.3102580429002	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTGTTTGTTGAGCTC	NA	False	NA	13	True	AATAAA	-1	NA	119067840	119079995	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_119067954_119068181_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097745	chr2	+	3953	5	FSM	ENSMUSG00000034216.13	ENSMUST00000037280.5	4054	5	0	101	0	26	multi-exon	FALSE	canonical	3	64	junction_3	7.17635004720366	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAGAGTCCTGCAAGCCT	6377	False	NA	NA	False	AAAAAG	-6	NA	119119222	119128833	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_119119612_119120633_119120776_119123178_119123271_119123399_119125271_119127374
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097757	chr2	+	1608	3	FSM	ENSMUSG00000027313.4	ENSMUST00000028780.4	1637	3	-26	55	-26	-55	multi-exon	FALSE	canonical	3	568	junction_2	33	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTGTCTCTGTACAG	7126	False	NA	26	True	CATAAA	-26	NA	119181683	119184807	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_119182118_119182837_119182874_119183669
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097774	chr2	+	192	1	Intergenic	novelGene_3038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGTTATGTAAATCAGA	NA	False	NA	NA	False	NA	NA	NA	119339831	119340023	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_119339800_119340000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097781	chr2	+	2594	7	FSM	ENSMUSG00000014077.14	ENSMUST00000014221.13	2609	7	15	0	-9	0	multi-exon	FALSE	canonical	3	147	junction_2	25.1197133741609	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGAGTTTTACCCGG	NA	False	NA	NA	False	AATAAA	-25	NA	119378192	119417508	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_119378399_119391211_119391285_119397130_119397212_119402248_119402377_119411175_119411238_119415010_119415134_119415587
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097792	chr2	+	8277	3	FSM	ENSMUSG00000085438.2	ENSMUST00000153581.2	8300	3	20	3	20	-3	multi-exon	FALSE	canonical	3	345	junction_2	41.5	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTGTGTTGTTGCTTT	NA	False	NA	21	True	AATAAA	-27	NA	119424803	119437980	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_119424916_119426739_119426993_119430068
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097804	chr2	-	1597	6	FSM	ENSMUSG00000072980.4	ENSMUST00000123818.2	1082	6	-38	-477	-38	18	multi-exon	FALSE	canonical	3	618	junction_4	35.3870032639103	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTATCTTTTGCTGGTTT	7442	False	NA	NA	False	NA	NA	NA	119448988	119439974	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_119440846_119442232_119442337_119443492_119443575_119446012_119446136_119448334_119448402_119448638
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097810	chr2	-	1469	5	NIC	ENSMUSG00000072980.4	novel	1082	6	NA	NA	-36	15	combination_of_known_splicesites	FALSE	canonical	3	58	junction_3	272.52247613729	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGTATCTTTTGCTGG	7444	False	NA	NA	False	NA	NA	NA	119448986	119439977	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_119440846_119442232_119442337_119443492_119443575_119448334_119448402_119448638
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097839	chr2	-	218	1	Intergenic	novelGene_3039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTTATTACACTCAGGTA	8543	False	NA	NA	False	NA	NA	NA	119453702	119453484	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_119453500_119453700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097848	chr2	-	1317	5	FSM	ENSMUSG00000027305.10	ENSMUST00000110802.8	1308	5	-9	0	-3	0	multi-exon	FALSE	canonical	3	109	junction_4	88.8453712919249	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCAGCCTTTTTCTGCTG	NA	False	NA	-1	True	AATAAA	-21	NA	119493311	119485926	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493260
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097871	chr2	+	238	1	Intergenic	novelGene_3040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTCCTTCCTTCCTTCC	6742	False	NA	NA	False	AATAAA	-7	NA	119554551	119554789	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_119554600_119554800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097873	chr2	+	1874	7	FSM	ENSMUSG00000027296.8	ENSMUST00000028758.8	1818	7	-56	0	-56	0	multi-exon	FALSE	canonical	3	153	junction_1	9.41039614232874	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGCCTCCTCCCCTTCA	NA	False	NA	23	True	AATAAA	-24	NA	119572761	119581744	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_119573343_119579670_119579768_119579842_119580060_119580153_119580359_119580574_119580677_119580957_119581030_119581144
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097886	chr2	-	4737	25	FSM	ENSMUSG00000034032.16	ENSMUST00000048493.12	4744	25	8	-1	0	0	multi-exon	FALSE	canonical	3	120	junction_24	70.0848691865005	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGACTGTTTTGTCACAT	472	False	NA	-1	True	AATAAA	-21	NA	119618010	119594439	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617895
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097914	chr2	-	4711	25	NIC	ENSMUSG00000034032.16	novel	5458	26	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_24	80.8678191041818	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCTGGACTGTTTTGTC	474	False	NA	-5	True	AATAAA	-17	NA	119618008	119594443	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617915
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097916	chr2	-	4789	26	FSM	ENSMUSG00000034032.16	ENSMUST00000099529.9	4813	26	20	4	-4	0	multi-exon	FALSE	canonical	3	111	junction_25	84.4691091464803	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCTGGACTGTTTTGTC	493	False	NA	-5	True	AATAAA	-17	NA	119617989	119594443	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617895
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097919	chr2	-	4906	25	ISM	ENSMUSG00000034032.16	ENSMUST00000099529.9	4813	26	20	4	-4	0	intron_retention	FALSE	canonical	3	165	junction_24	62.6318470419713	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCTGGACTGTTTTGTC	493	False	NA	-5	True	AATAAA	-17	NA	119617989	119594443	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097927	chr2	-	186	1	Intergenic	novelGene_3041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAGGAGTACTTGCAG	NA	False	NA	NA	False	NA	NA	NA	119626783	119626597	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_119626600_119626800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097946	chr2	-	194	1	Intergenic	novelGene_3042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGGCGCAGGGGTGGGGG	NA	False	NA	NA	False	NA	NA	NA	119681186	119680992	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_119681000_119681200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097968	chr2	-	173	1	Intergenic	novelGene_3043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATCTAGTCTTTAAC	NA	False	NA	NA	False	NA	NA	NA	119810921	119810748	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_119810700_119810900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097974	chr2	+	186	1	Intergenic	novelGene_3044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGAAGCTTATTTTGGGC	NA	False	NA	NA	False	NA	NA	NA	119836726	119836912	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_119836700_119836900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097981	chr2	+	1375	8	FSM	ENSMUSG00000098789.8	ENSMUST00000044675.5	1373	8	-2	0	-2	0	multi-exon	FALSE	canonical	3	72	junction_5	32.3128836376389	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	6	True	NA	NA	NA	119857961	119863075	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119862055_119862133_119862321_119862482_119862594
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000097989	chr2	+	1264	7	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_4	49.0736408087093	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	6	True	NA	NA	NA	119857976	119863075	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119862055_119862133_119862321_119862482_119862594
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098003	chr2	-	3730	6	FSM	ENSMUSG00000027293.14	ENSMUST00000028755.8	3730	6	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_2	18.4217263034711	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGCACAGTTCCTAGAC	NA	False	NA	NA	False	AATAAA	-20	NA	119985087	119919655	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_119922166_119927443_119927609_119932500_119932914_119958072_119958171_119967379_119967557_119984720
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098018	chr2	-	4344	25	FSM	ENSMUSG00000027291.16	ENSMUST00000028752.8	4339	25	-5	0	-5	0	multi-exon	FALSE	canonical	3	237	junction_15	25.6031410833385	210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCCTTGAGCCTCCCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	120183611	120146941	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098045	chr2	-	6770	20	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-16	0	intron_retention	FALSE	canonical	3	389	junction_17	196.49011591164	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTATTTGTCTGCATA	9769	False	NA	-6	True	AATAAA	-21	NA	120394340	120337300	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394167
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098071	chr2	-	4423	10	ISM	ENSMUSG00000027288.17	ENSMUST00000055241.13	9085	22	-52	19443	-16	0	5prime_fragment	FALSE	canonical	3	679	junction_5	193.010522325585	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTTTCATTGTTCCCT	9769	False	NA	-3	True	AATAAA	-43	NA	120394340	120356743	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_-_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098074	chr2	-	2036	8	NIC	ENSMUSG00000027288.17	novel	4375	10	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	389	junction_5	258.657365356298	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTTTCATTGTTCCCT	9789	False	NA	-3	True	AATAAA	-43	NA	120394320	120356743	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394167
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098081	chr2	-	2767	5	ISM	ENSMUSG00000027288.17	ENSMUST00000055241.13	9085	22	-24	26583	3	-1517	5prime_fragment	FALSE	canonical	3	681	junction_1	204.702680734767	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTGTAGATGTCTGCTT	9797	False	NA	NA	False	ATTAAA	-44	NA	120394312	120363883	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_-_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098091	chr2	+	2727	8	FSM	ENSMUSG00000027287.15	ENSMUST00000110711.9	2723	8	-4	0	-4	0	multi-exon	FALSE	canonical	3	373	junction_4	7.72221814385119	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACAGACCAGTAATGCCC	NA	False	NA	10	True	NA	NA	NA	120398147	120431736	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098102	chr2	-	1798	6	FSM	ENSMUSG00000027286.17	ENSMUST00000102499.8	1961	6	163	0	-2	0	multi-exon	FALSE	canonical	3	29	junction_5	57.8321709777525	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTGGAAGTAATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	120439838	120434718	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439761
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098103	chr2	-	1803	6	NIC	ENSMUSG00000027286.17	novel	1962	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	69.0582362937253	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTGGAAGTAATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	120439836	120434718	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439754
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098105	chr2	-	1962	6	FSM	ENSMUSG00000027286.17	ENSMUST00000102497.10	1962	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	44.5394207416307	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTGGAAGTAATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	120439836	120434718	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439595
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098132	chr2	+	3126	6	FSM	ENSMUSG00000027285.14	ENSMUST00000124187.8	3154	6	28	0	28	0	multi-exon	FALSE	canonical	3	158	junction_2	54.4147038951789	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGCTCCAATATGAATCC	NA	False	NA	NA	False	AATAAA	-16	NA	120439891	120452041	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_120440027_120442818_120442912_120443531_120443602_120446335_120446469_120448353_120448463_120449455
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098134	chr2	+	3054	5	FSM	ENSMUSG00000027285.14	ENSMUST00000028741.14	1430	5	30	-1654	30	0	multi-exon	FALSE	canonical	3	33	junction_2	111.162887242101	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGCTCCAATATGAATCC	NA	False	NA	NA	False	AATAAA	-16	NA	120439893	120452041	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_120440027_120442818_120442912_120446335_120446469_120448353_120448463_120449455
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098143	chr2	-	4340	28	NIC	ENSMUSG00000027284.17	novel	6384	28	NA	NA	-6	2	combination_of_known_junctions	TRUE	canonical	3	36	junction_26	16.0161955070022	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGCTGTTCTCCCTGCT	6108	False	NA	NA	False	AATAAA	-17	NA	120562005	120548664	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553090_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560779_120560987_120561182_120561674_120561892
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098150	chr2	-	4337	28	NIC	ENSMUSG00000027284.17	novel	6384	28	NA	NA	-7	1	combination_of_known_junctions	TRUE	canonical	3	17	junction_26	17.8771144441848	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGGCTGTTCTCCCTGC	6107	False	NA	NA	False	AATAAA	-16	NA	120562006	120548665	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553090_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560779_120560984_120561182_120561674_120561892
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098154	chr2	+	201	1	Intergenic	novelGene_3045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTCATGTATAAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	120552102	120552303	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_120552100_120552300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098167	chr2	-	7716	47	FSM	ENSMUSG00000027272.6	ENSMUST00000028728.6	7768	47	49	3	26	-3	multi-exon	FALSE	canonical	3	63	junction_19	10.4276243563166	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACTTCTCATGTTTGGGC	NA	False	NA	NA	False	AATAAA	-34	NA	120801147	120690752	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_120693273_120694798_120694901_120696870_120697042_120698706_120698785_120701469_120701527_120703604_120703714_120705846_120705981_120707439_120707540_120711511_120711663_120712701_120712770_120720256_120720354_120722552_120722609_120723548_120723698_120725552_120725647_120726976_120727075_120730981_120731132_120732082_120732177_120734474_120734681_120737324_120737507_120739902_120739990_120741582_120741693_120742478_120742579_120745347_120745503_120745848_120745898_120746904_120747008_120748301_120748355_120751858_120751984_120754612_120754677_120756435_120756538_120756774_120756841_120759866_120759978_120760201_120760264_120761326_120761508_120764784_120764914_120765696_120765797_120771447_120771606_120772957_120773057_120775131_120775221_120776314_120776423_120776754_120776879_120777102_120777166_120778238_120778378_120780520_120780652_120786090_120786202_120791565_120791645_120793844_120794102_120801002
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098174	chr2	+	1945	2	Antisense	novelGene_ENSMUSG00000027272.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCCAAACCAAATTCTGGA	NA	False	NA	NA	False	NA	NA	NA	120781755	120783757	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr2_+_120783180_120783236
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098189	chr2	+	158	1	Intergenic	novelGene_3046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAAGATTCACT	NA	False	NA	NA	False	NA	NA	NA	120881742	120881900	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_120881700_120881900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098202	chr2	+	2608	11	NIC	ENSMUSG00000027259.16	novel	2477	11	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	16.3572613844739	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGCTTGAATTGCTCTT	NA	False	NA	NA	False	NA	NA	NA	120970904	120987159	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_120971148_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098207	chr2	+	2545	11	FSM	ENSMUSG00000027259.16	ENSMUST00000119031.8	2477	11	-68	0	-2	0	multi-exon	FALSE	canonical	3	35	junction_1	26.5369553641709	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGCTTGAATTGCTCTT	NA	False	NA	NA	False	NA	NA	NA	120970910	120987159	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_120971091_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098257	chr2	-	6215	28	FSM	ENSMUSG00000043909.17	ENSMUST00000110648.8	9621	28	-7	3413	-7	0	multi-exon	TRUE	canonical	3	115	junction_12	23.0142199734784	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGATGTCTTCATCTGTT	8065	False	NA	-5	True	AATAAA	-26	NA	121101895	121028731	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098284	chr2	+	1521	10	FSM	ENSMUSG00000000308.15	ENSMUST00000078222.9	1518	10	-3	0	-3	0	multi-exon	FALSE	canonical	3	125	junction_1	32.5602954456217	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTGTGTTATTTCTAT	798	False	NA	32	True	AGTAAA	-20	NA	121188253	121194218	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_121188341_121189276_121189483_121190059_121190259_121190425_121190522_121191036_121191259_121191383_121191470_121191586_121191711_121193155_121193291_121193455_121193582_121193978
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098292	chr2	+	2452	9	FSM	ENSMUSG00000000308.15	ENSMUST00000000317.13	1620	9	-832	0	2	0	multi-exon	FALSE	canonical	3	189	junction_3	17.8881070826401	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTGTGTTATTTCTAT	803	False	NA	32	True	AGTAAA	-20	NA	121188258	121194218	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_121189483_121190059_121190259_121190425_121190522_121191036_121191259_121191383_121191470_121191586_121191711_121193155_121193291_121193455_121193582_121193978
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098305	chr2	+	227	1	Intergenic	novelGene_3047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATGAATACACCATTGC	NA	False	NA	NA	False	NA	NA	NA	121221902	121222129	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_121221900_121222100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098313	chr2	+	182	1	Intergenic	novelGene_3048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGGGATTATTGCCAGC	9245	False	NA	NA	False	NA	NA	NA	121239617	121239799	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_121239600_121239800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098318	chr2	+	1970	13	FSM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	100	700	-8	-700	multi-exon	FALSE	canonical	3	3731	junction_4	277.160252481404	1946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTTCCCCTCATGGGA	NA	False	NA	12	True	AATAAA	-21	NA	121244355	121268468	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_121244687_121252929_121253009_121255005_121255124_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264181_121264465_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098325	chr2	+	1894	13	NNC	ENSMUSG00000027248.14	novel	2770	13	NA	NA	63	-707	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1150.32076142555	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTCGTTTTTTTCCCCT	NA	False	NA	5	True	AATAAA	-14	NA	121244426	121268461	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_121244687_121252929_121253009_121255005_121255124_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264181_121264465_121264577_121265269_121265399_121266401_121266482_121266837_121266896_121268066
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098346	chr2	+	2506	3	FSM	ENSMUSG00000074884.13	ENSMUST00000139253.8	3056	3	144	406	-29	9	multi-exon	FALSE	canonical	3	5931	junction_1	722	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCTGGGTAGAAGTTGG	NA	False	NA	12	True	NA	NA	NA	121279819	121283495	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_121279923_121280455_121280565_121281201
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098352	chr2	+	548	3	FSM	ENSMUSG00000074884.13	ENSMUST00000099475.12	525	3	-15	-8	0	8	multi-exon	FALSE	canonical	3	183	junction_2	2874	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCCTGGTTTGACTGGGGA	NA	False	NA	5	True	ATTAAA	-22	NA	121279848	121281543	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_121279923_121280455_121280565_121281178
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098362	chr2	+	608	4	FSM	ENSMUSG00000027245.12	ENSMUST00000126764.2	961	4	121	232	-40	4	multi-exon	FALSE	canonical	3	4276	junction_2	190.202231556017	313	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTTATATTGTGTGTGT	NA	False	NA	16	True	TATAAA	-24	NA	121287564	121288921	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_121287773_121288126_121288183_121288472_121288525_121288629
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098375	chr2	-	2612	7	FSM	ENSMUSG00000048222.4	ENSMUST00000056732.4	3362	7	26	724	26	-724	multi-exon	FALSE	canonical	3	438	junction_3	20.2457128520803	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGCAGTTCTTGAAGTT	9221	False	NA	-7	True	AATAAA	-15	NA	121304522	121291439	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_121292786_121292867_121292958_121295259_121295420_121297216_121297378_121297468_121297578_121300259_121300798_121304314
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098379	chr2	-	5484	7	FSM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	1	-1287	1	1287	multi-exon	FALSE	canonical	3	409	junction_6	26.8747093007534	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACAGCCACATTAATTCT	NA	False	NA	NA	False	NA	NA	NA	121337145	121321104	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098395	chr2	+	184	1	Intergenic	novelGene_3049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATAAAGCAATTAATTAAAA	2479	False	NA	NA	False	NA	NA	NA	121407625	121407809	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_121407600_121407800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098399	chr2	+	191	1	Intergenic	novelGene_3050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCGTACACAGAGCCCTGG	842	False	NA	NA	False	NA	NA	NA	121438767	121438958	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_121438800_121439000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098413	chr2	+	3927	10	FSM	ENSMUSG00000060227.16	ENSMUST00000078752.10	4215	10	-24	312	-24	1	multi-exon	TRUE	canonical	3	136	junction_8	32.2490309931942	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACAGTTTTGATTATATA	NA	False	NA	9	True	AATAAA	-18	NA	121697426	121766389	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121756041_121756210_121763958
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098419	chr2	+	3757	9	FSM	ENSMUSG00000060227.16	ENSMUST00000110586.10	4032	9	-22	297	-22	1	multi-exon	FALSE	canonical	3	90	junction_8	46.1246612453685	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACAGTTTTGATTATATA	NA	False	NA	9	True	AATAAA	-18	NA	121697428	121766389	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121763958
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098431	chr2	+	190	1	Intergenic	novelGene_3051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACAACCAGGGCTGGTG	1501	False	NA	NA	False	NA	NA	NA	121720008	121720198	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_121720000_121720200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098434	chr2	+	230	1	Intergenic	novelGene_3052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCATAATAAAAACTCTCCT	NA	False	NA	NA	False	NA	NA	NA	121735615	121735845	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_121735600_121735800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098438	chr2	-	159	1	Intergenic	novelGene_3053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTAAAGAAAATACT	NA	False	NA	NA	False	NA	NA	NA	121741227	121741068	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_121741100_121741200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098442	chr2	+	184	1	Intergenic	novelGene_3054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGTAAAATAAAGATAGATT	NA	False	NA	NA	False	NA	NA	NA	121771446	121771630	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_121771400_121771600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098445	chr2	+	195	1	Intergenic	novelGene_3055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCTAGAGCCATGGGATA	NA	False	NA	NA	False	NA	NA	NA	121777442	121777637	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_121777400_121777600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098466	chr2	+	6673	14	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	-1	1679	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_8	135.240613976124	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTTTGATGACATTTTT	NA	False	NA	14	True	NA	NA	NA	121786965	121845802	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121827912_121828338_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098474	chr2	+	137	1	Intergenic	novelGene_3056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATACCTCAGAATAATTTT	NA	False	NA	NA	False	NA	NA	NA	121828847	121828984	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_121828800_121829000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098481	chr2	+	185	1	Intergenic	novelGene_3057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGTGGACAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	121834796	121834981	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_121834800_121835000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098522	chr2	+	879	4	FSM	ENSMUSG00000060802.9	ENSMUST00000102476.5	860	4	-2	-17	-2	17	multi-exon	FALSE	canonical	3	168	junction_2	12.4721912892465	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGCCAGACATTGCCAG	NA	False	NA	NA	False	NA	NA	NA	121978164	121983581	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_121978286_121981353_121981633_121982127_121982157_121983131
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098531	chr2	+	207	1	Intergenic	novelGene_3058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAGATGAGATGGCAAT	NA	False	NA	NA	False	TTTAAA	-2	NA	122012170	122012377	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_122012200_122012400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098547	chr2	+	198	1	Intergenic	novelGene_3059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGCACCACCACTGCCCA	NA	False	NA	NA	False	NA	NA	NA	122046085	122046283	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_122046100_122046300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098552	chr2	+	2309	9	FSM	ENSMUSG00000027227.8	ENSMUST00000110551.4	2352	9	42	1	42	-1	multi-exon	FALSE	canonical	3	111	junction_3	10.5763592507063	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTATGTGGTTTGTGCC	NA	False	NA	15	True	AATAAA	-18	NA	122065271	122095820	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_122065440_122076962_122076997_122079279_122079445_122083667_122083828_122087322_122087442_122089545_122089612_122090660_122090837_122093668_122093791_122094521
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098560	chr2	-	1786	6	FSM	ENSMUSG00000033256.15	ENSMUST00000151130.8	1539	6	-11	-236	-11	0	multi-exon	TRUE	canonical	3	35	junction_2	39.8216021777125	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCGAGCATCCACTCGC	NA	False	NA	-10	True	TATAAA	-39	NA	122199629	122179372	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_122180021_122184245_122184366_122184511_122184679_122187563_122187771_122189928_122190071_122199127
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098561	chr2	-	1788	6	FSM	ENSMUSG00000033256.15	ENSMUST00000110531.9	1557	6	-230	-1	-11	0	multi-exon	FALSE	canonical	3	69	junction_2	30.854497241083	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCGAGCATCCACTCGC	NA	False	NA	-10	True	TATAAA	-39	NA	122199629	122179372	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_122180021_122184245_122184366_122184509_122184679_122187563_122187771_122189928_122190071_122199127
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098579	chr2	+	621	5	FSM	ENSMUSG00000033213.17	ENSMUST00000047498.15	792	5	65	106	0	0	multi-exon	FALSE	canonical	3	117	junction_4	21.9146070008111	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGATTTGTGCAAGAGATA	NA	False	NA	23	True	AATAAA	-25	NA	122479834	122483005	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_122479862_122479991_122480054_122480176_122480263_122481135_122481197_122482620
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098593	chr2	-	181	1	Intergenic	novelGene_3060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGATCTTTACATAC	NA	False	NA	NA	False	NA	NA	NA	122825325	122825144	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_122825100_122825300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098605	chr2	-	2901	14	NIC	ENSMUSG00000027201.17	novel	2928	15	NA	NA	-13	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	192.845739620923	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTACTTGTTGCTTTTT	NA	False	NA	-6	True	NA	NA	NA	124965559	124929658	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098614	chr2	-	2949	15	NIC	ENSMUSG00000027201.17	novel	2942	16	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	223.92901572068	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTTACTTGTTGCTTT	NA	False	NA	-8	True	NA	NA	NA	124965558	124929660	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124940716_124940768_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098618	chr2	-	3021	16	NIC	ENSMUSG00000027201.17	novel	2071	19	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	215.150634569261	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTTACTTGTTGCTTT	NA	False	NA	-8	True	NA	NA	NA	124965558	124929660	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124940716_124940768_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098623	chr2	-	2970	15	NIC	ENSMUSG00000027201.17	novel	2999	16	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	185.119500841583	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTTACTTGTTGCTTT	NA	False	NA	-8	True	NA	NA	NA	124965558	124929660	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098668	chr2	-	6707	18	FSM	ENSMUSG00000035093.17	ENSMUST00000053699.13	6797	18	85	5	85	-5	multi-exon	FALSE	canonical	3	54	junction_6	11.6758408483317	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAATTTCTGTGTTCTTTT	389	False	NA	NA	False	AATAAA	-31	NA	125624705	125578910	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_125582838_125585733_125585954_125587716_125587872_125589304_125589526_125592198_125592362_125593648_125593782_125594733_125594901_125599113_125599256_125599351_125599520_125600085_125600167_125602191_125602327_125609294_125609411_125609728_125609754_125610026_125610254_125613328_125613465_125615095_125615421_125617472_125617652_125624518
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098675	chr2	+	201	1	Intergenic	novelGene_3061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACAAGCCTTTGTGTGG	NA	False	NA	NA	False	NA	NA	NA	125641115	125641316	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_125641100_125641300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098677	chr2	-	3317	13	FSM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	57	-1301	-19	3	multi-exon	FALSE	canonical	3	620	junction_9	116.017838666685	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTGTGTGCATGTGATAA	NA	False	NA	-1	True	AATAAA	-25	NA	125701002	125672220	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098680	chr2	-	3337	13	FSM	ENSMUSG00000027206.14	ENSMUST00000110463.8	3392	13	57	-2	-19	2	multi-exon	FALSE	canonical	3	314	junction_9	189.484534695813	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTGTGTGCATGTGATA	NA	False	NA	-2	True	AATAAA	-24	NA	125701002	125672221	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098687	chr2	-	3042	12	NNC	ENSMUSG00000027206.14	novel	2073	13	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_9	266.946461342233	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTGTGTGCATGTGATA	NA	False	NA	-2	True	AATAAA	-24	NA	125700916	125672221	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125690188_125690205_125691659_125691774_125700855
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098703	chr2	+	250	1	Intergenic	novelGene_3062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATGTTGGCTGGACATGG	NA	False	NA	NA	False	ATTAAA	-37	NA	125688434	125688684	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_125688400_125688700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098707	chr2	+	1794	10	FSM	ENSMUSG00000027207.16	ENSMUST00000094604.9	1928	10	134	0	-2	0	multi-exon	FALSE	canonical	3	86	junction_4	15.4040238449986	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTTGCTCTTGAATG	NA	False	NA	8	True	ATTAAA	-15	NA	125708160	125825507	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_125708306_125720197_125720287_125729783_125729908_125735272_125735364_125738564_125738712_125771480_125771580_125773172_125773326_125788703_125788915_125817179_125817382_125824974
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098716	chr2	+	1324	5	FSM	ENSMUSG00000023330.13	ENSMUST00000170908.8	1342	5	19	-1	19	1	multi-exon	FALSE	canonical	3	175	junction_1	15.4495145554804	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCGCCCTTACCTTTCGA	7298	False	NA	26	True	ATTAAA	-24	NA	125994079	126007197	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_125994135_125996465_125996781_126000329_126000474_126001689_126001949_126006646
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098726	chr2	+	2362	10	FSM	ENSMUSG00000027359.17	ENSMUST00000061491.14	2918	10	560	-4	560	4	multi-exon	FALSE	canonical	3	61	junction_5	10.1592261783666	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGCTTCGCTGTCTCTCA	NA	False	NA	20	True	AATAAA	-20	NA	126394886	126430167	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_126395553_126403456_126403667_126406597_126406757_126409666_126409792_126416621_126416817_126419779_126419871_126420768_126420968_126422825_126422924_126428171_126428303_126429679
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098741	chr2	+	207	1	Intergenic	novelGene_3063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	325	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAATTCTGATCAGAT	NA	False	NA	NA	False	NA	NA	NA	126431354	126431561	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_126431400_126431600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098754	chr2	-	2614	9	FSM	ENSMUSG00000027361.16	ENSMUST00000110424.9	2613	9	0	-1	0	1	multi-exon	FALSE	canonical	3	55	junction_3	121.804595048791	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGCAGACTCATGTT	NA	False	NA	-9	True	ATTAAA	-15	NA	126517422	126470831	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_126472303_126481148_126481265_126488482_126488666_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098768	chr2	-	238	1	Intergenic	novelGene_3064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAACTTTAGTTTAAAAT	NA	False	NA	NA	False	TTTAAA	-2	NA	126521093	126520855	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_126520900_126521100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098777	chr2	+	4180	19	FSM	ENSMUSG00000027363.16	ENSMUST00000028841.14	4145	19	-18	-17	-3	17	multi-exon	TRUE	canonical	3	323	junction_9	42.2163738639668	473	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTGTCTTCTTTTTT	3558	False	NA	23	True	ATTAAA	-37	NA	126549244	126601234	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098821	chr2	-	1188	2	ISM	ENSMUSG00000027365.15	ENSMUST00000028843.12	6985	39	53789	28370	-4662	-6936	internal_fragment	FALSE	canonical	3	299	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGACAATCTGTGGTCCTGG	6429	False	NA	NA	False	NA	NA	NA	126664248	126661860	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_-_126661884_126663083
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098829	chr2	+	199	1	Intergenic	novelGene_3065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTTTATCTGGCCACTA	NA	False	NA	NA	False	NA	NA	NA	126688928	126689127	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_126688900_126689100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098834	chr2	-	245	1	Intergenic	novelGene_3066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACACATGCAGGGATGTTC	154	False	NA	NA	False	NA	NA	NA	126844275	126844030	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_126844000_126844300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098845	chr2	+	2306	5	NNC	ENSMUSG00000001999.16	novel	657	6	NA	NA	0	879	intron_retention	FALSE	canonical	3	18	junction_1	73.8896981994107	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCGTCCTGGGATTCAT	2237	False	NA	NA	False	NA	NA	NA	126912612	126930669	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_126912646_126922449_126922579_126924851_126924971_126927882_126928003_126928764
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098848	chr2	+	1134	8	FSM	ENSMUSG00000001999.16	ENSMUST00000002064.15	1160	8	26	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	50.5988626152721	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAATAGTGTTGATGACT	2237	False	NA	NA	False	AATAAA	-20	NA	126912612	126939004	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_126912651_126922449_126922579_126924851_126924971_126927882_126928003_126928764_126928863_126933958_126934067_126937005_126937178_126938654
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098849	chr2	+	2311	5	FSM	ENSMUSG00000001999.16	ENSMUST00000142861.2	1460	5	28	-879	0	879	multi-exon	FALSE	canonical	3	72	junction_1	50.701947694344	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCGTCCTGGGATTCAT	2237	False	NA	NA	False	NA	NA	NA	126912612	126930669	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_126912651_126922449_126922579_126924851_126924971_126927882_126928003_126928764
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098852	chr2	+	1034	6	NIC	ENSMUSG00000001999.16	novel	657	6	NA	NA	0	424	combination_of_known_junctions	FALSE	canonical	3	37	junction_5	66.545022353291	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGAGTCGATTTTGAT	2237	False	NA	NA	False	NA	NA	NA	126912612	126932693	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_126912651_126922449_126922579_126924851_126924971_126927882_126928003_126928764_126928863_126932163
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098868	chr2	-	2673	18	FSM	ENSMUSG00000034906.16	ENSMUST00000110387.4	2695	18	7	15	7	3	multi-exon	TRUE	canonical	3	394	junction_9	30.9044738701424	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGCCCAGTAAACAGTC	NA	False	NA	-2	True	AATAAA	-19	NA	126975867	126945743	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967607_126968034_126968128_126969023_126969115_126969404_126969643_126975768
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098876	chr2	+	184	1	Intergenic	novelGene_3067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTTTGAACTAACATCA	NA	False	NA	NA	False	NA	NA	NA	126988019	126988203	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_126988000_126988200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098886	chr2	+	7787	45	FSM	ENSMUSG00000003660.11	ENSMUST00000103220.4	6745	45	-53	-989	-40	989	multi-exon	FALSE	canonical	3	516	junction_16	102.022451345341	230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTCAGAAATTCTAATTT	NA	False	NA	5	True	ATTAAA	-17	NA	127050265	127083360	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_127050459_127050893_127051058_127052613_127052786_127053519_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098893	chr2	+	188	1	Intergenic	novelGene_3068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAGAGAGCTTGGTATG	NA	False	NA	NA	False	NA	NA	NA	127054913	127055101	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_127054900_127055100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098912	chr2	+	4428	4	FSM	ENSMUSG00000034850.16	ENSMUST00000035871.15	4811	4	40	343	-21	-343	multi-exon	FALSE	canonical	3	59	junction_1	34.6634613902818	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTAGTCTTCCTGTGCC	2374	False	NA	12	True	AATAAA	-25	NA	127089867	127102684	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_127090005_127090411_127090730_127097924_127098090_127098876
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098926	chr2	+	3142	8	FSM	ENSMUSG00000027367.17	ENSMUST00000110375.9	3116	8	-20	-6	-9	6	multi-exon	FALSE	canonical	3	326	junction_5	27.592515992122	300	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTTCATTTCTGGCCAC	NA	False	NA	15	True	AATAAA	-22	NA	127112128	127140858	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_127112801_127126014_127126224_127126451_127126502_127132691_127132803_127132877_127132961_127134070_127134171_127137403_127137489_127139026
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098941	chr2	-	210	1	Intergenic	novelGene_3069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGTCGAGGGTGTTGAGG	NA	False	NA	NA	False	AAGAAA	-13	NA	127114186	127113976	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_127114000_127114200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098945	chr2	+	180	1	Intergenic	novelGene_3070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGAACTATCTCCCCCC	NA	False	NA	NA	False	NA	NA	NA	127128031	127128211	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_127128000_127128200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098958	chr2	+	2668	22	FSM	ENSMUSG00000046338.5	ENSMUST00000062211.4	2628	22	-33	-7	-33	7	multi-exon	TRUE	canonical	3	16	junction_1	53.4925768898164	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATGTCCAATATCTGCT	4968	False	NA	21	True	AATAAA	-32	NA	127267085	127278019	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098960	chr2	+	2657	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	60.6148017815066	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAAGTACATGTCCAAT	4969	False	NA	14	True	AATAAA	-25	NA	127267086	127278012	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098975	chr2	+	2632	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	48.8950470250594	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAAGTACATGTCCAAT	4985	False	NA	14	True	AATAAA	-25	NA	127267102	127278012	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_127267142_127269172_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000098984	chr2	-	1227	8	FSM	ENSMUSG00000027371.11	ENSMUST00000028848.4	1211	8	-16	0	-1	0	multi-exon	FALSE	canonical	3	84	junction_6	10.321366781822	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTAGCTTCCACTGTCTTT	NA	False	NA	-4	True	AATAAA	-19	NA	127286486	127278134	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_127278327_127278465_127278554_127278656_127278766_127280032_127280193_127280429_127280490_127282305_127282523_127283793_127284045_127286336
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099006	chr2	+	4519	12	FSM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	6	-44	6	44	multi-exon	FALSE	canonical	3	1110	junction_4	149.07045314213	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCCTTGAGAGCAAGGC	3973	False	NA	51	True	AATAAA	-19	NA	127429147	127448793	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099026	chr2	-	2342	4	FSM	ENSMUSG00000027375.15	ENSMUST00000028854.15	2778	4	436	0	-40	0	multi-exon	FALSE	canonical	3	105	junction_3	8.83176086632785	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTCTCACTCTTTTGT	NA	False	NA	-2	True	ATTAAA	-17	NA	127498179	127475145	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_127476975_127480508_127480635_127482140_127482309_127497960
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099045	chr2	-	2292	20	FSM	ENSMUSG00000027378.17	ENSMUST00000110357.2	2296	20	6	-2	6	0	multi-exon	TRUE	canonical	3	41	junction_11	13.7437973922422	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGTTATATCTAAATTTT	2797	False	NA	2	True	AATAAA	-18	NA	127630811	127582653	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127595892_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608039_127610090_127610179_127611534_127611578_127612178_127612313_127614020_127614123_127615817_127616020_127619188_127619314_127621023_127621085_127621982_127622057_127630705
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099054	chr2	-	453	2	FSM	ENSMUSG00000051319.7	ENSMUST00000135091.2	800	2	-5	352	-5	-352	multi-exon	FALSE	canonical	3	537	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTTCCTCCTCACAAAA	NA	False	NA	-5	True	AATAAA	-19	NA	127634413	127633659	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_127633753_127634053
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099063	chr2	-	3387	25	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	-5	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_18	178.998836122846	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGTTGTTCTAAATACTC	NA	False	NA	1	True	AATAAA	-24	NA	127673790	127643035	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659357_127661132_127661285_127663594_127663777_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099064	chr2	-	3432	25	FSM	ENSMUSG00000027379.15	ENSMUST00000028858.9	3418	25	-5	-9	-5	0	multi-exon	FALSE	canonical	0	0	junction_18	145.15221297161	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGTTGTTCTAAATACTC	NA	False	NA	1	True	AATAAA	-24	NA	127673790	127643035	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663780_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099068	chr2	-	3429	25	FSM	ENSMUSG00000027379.15	ENSMUST00020183811.1	3418	25	-11	0	-5	0	multi-exon	FALSE	canonical	0	0	junction_18	145.15221297161	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGTTGTTCTAAATACTC	NA	False	NA	1	True	AATAAA	-24	NA	127673790	127643035	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663777_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099091	chr2	+	208	1	Intergenic	novelGene_3071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATCAAAATATAACACTT	NA	False	NA	NA	False	NA	NA	NA	127667396	127667604	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_127667400_127667600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099106	chr2	-	223	1	Intergenic	novelGene_3072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCGGGCATGGTGGCGCA	NA	False	NA	NA	False	NA	NA	NA	128439471	128439248	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_128439200_128439500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099135	chr2	+	2020	7	FSM	ENSMUSG00000027394.14	ENSMUST00000035812.14	4567	7	16	2531	16	-2531	multi-exon	FALSE	canonical	3	70	junction_4	11.1118055338555	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTTACTTTACTTAAAG	NA	False	NA	NA	False	AAAACA	-16	NA	128907877	128935672	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_128908224_128910774_128910854_128917775_128918009_128923129_128923266_128923893_128924164_128930913_128931058_128934860
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099142	chr2	+	4010	15	FSM	ENSMUSG00000027395.16	ENSMUST00000103205.11	3998	15	-9	-3	-9	3	multi-exon	FALSE	canonical	3	224	junction_10	36.5564282853179	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGATTTTTATTTTTAT	NA	False	NA	18	True	AATAAA	-19	NA	128942905	128968517	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959847_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099150	chr2	+	3826	15	NNC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_9	95.2666772587266	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGATTTTTATTTTT	NA	False	NA	16	True	AATAAA	-17	NA	128942925	128968515	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955648_128957558_128957693_128959954_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099171	chr2	+	193	1	Intergenic	novelGene_3073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTCAGTTCTGCGTGGT	NA	False	NA	NA	False	NA	NA	NA	129030867	129031060	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_129030900_129031100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099182	chr2	+	3318	11	FSM	ENSMUSG00000027397.15	ENSMUST00000028880.10	3316	11	-3	1	-3	-1	multi-exon	FALSE	canonical	3	202	junction_5	146.125973050652	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTGTGCTTTTTGTT	NA	False	NA	21	True	AATAAA	-23	NA	129040680	129053535	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_129040913_129041368_129041985_129042102_129042244_129042419_129042506_129045978_129046076_129048286_129048407_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099199	chr2	-	3134	9	NNC	ENSMUSG00000048327.7	novel	3137	9	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	74	junction_2	84.1037305950218	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCTGTTGTTCTCTT	NA	False	NA	0	True	AATAAA	-20	NA	129139132	129110129	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_-_129111184_129112494_129112679_129114416_129114478_129117409_129117566_129123811_129124020_129126776_129128021_129132877_129132930_129138233_129138301_129139024
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099200	chr2	-	3137	9	FSM	ENSMUSG00000048327.7	ENSMUST00000052708.7	3137	9	0	0	0	0	multi-exon	TRUE	canonical	3	256	junction_2	30.0416377715996	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCTGTTGTTCTCTT	NA	False	NA	0	True	AATAAA	-20	NA	129139132	129110129	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_129111184_129112494_129112682_129114416_129114478_129117409_129117566_129123811_129124020_129126776_129128021_129132877_129132930_129138233_129138301_129139024
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099214	chr2	+	169	1	Intergenic	novelGene_3074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGGCCAAGTGGCCCG	NA	False	NA	NA	False	NA	NA	NA	129146033	129146202	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_129146000_129146200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099223	chr2	+	3796	9	FSM	ENSMUSG00000037902.19	ENSMUST00000179001.8	3812	9	24	-8	-2	0	multi-exon	FALSE	canonical	3	26	junction_1	29.9934888767546	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGGGGTGTTCCATT	NA	False	NA	NA	False	AATAAA	-20	NA	129434782	129474148	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_129434996_129435523_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469906_129471846
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099227	chr2	+	4320	8	FSM	ENSMUSG00000037902.19	ENSMUST00000103202.10	3982	8	-338	0	2	0	multi-exon	FALSE	canonical	3	97	junction_1	10.6215030259663	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGGGGTGTTCCATT	NA	False	NA	NA	False	AATAAA	-20	NA	129434786	129474148	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469906_129471846
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099241	chr2	-	1153	7	FSM	ENSMUSG00000027404.17	ENSMUST00000103199.9	1161	7	16	-8	16	8	multi-exon	TRUE	canonical	3	3295	junction_4	264.518850409989	749	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTTCTGAGTGCCTAA	NA	False	NA	-3	True	AATAAA	-36	NA	130021307	130013546	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_130013864_130014522_130014649_130014955_130015095_130015526_130015680_130017249_130017362_130018934_130019087_130021153
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099263	chr2	+	1905	12	FSM	ENSMUSG00000027405.17	ENSMUST00000103198.11	1877	12	-23	-5	-23	5	multi-exon	FALSE	canonical	3	1876	junction_9	231.115011975273	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTTGTTTATTGACTAT	NA	False	NA	36	True	AATAAA	-25	NA	130116326	130121238	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120816
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099293	chr2	+	3285	7	FSM	ENSMUSG00000027405.17	ENSMUST00000161543.2	2960	7	0	-325	0	1	multi-exon	FALSE	canonical	3	1993	junction_1	225.275695291101	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130119891_130120075
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099296	chr2	+	2019	13	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	170	junction_12	786.810487382798	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120332_130120491_130120816
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099301	chr2	+	2043	12	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	132	junction_8	672.651113625152	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119235_130119395_130119545_130119768_130119891_130120075_130120211_130120816
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099303	chr2	+	2196	13	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	132	junction_8	932.387511833048	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119235_130119395_130119545_130119768_130119891_130120075_130120211_130120332_130120491_130120816
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099306	chr2	+	2683	11	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	1	intron_retention	FALSE	canonical	3	433	junction_10	618.436253788537	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119545_130119768_130119891_130120075_130120211_130120332
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099308	chr2	+	2455	9	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	1	intron_retention	FALSE	canonical	3	1876	junction_6	264.829662235936	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130119545_130119768_130119891_130120075_130120211_130120816
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099309	chr2	+	2527	12	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	132	junction_8	825.582559156546	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119235_130119395_130119545_130119768_130119891_130120075_130120211_130120332
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099310	chr2	+	1860	12	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	703.559944170589	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119895_130120075_130120211_130120816
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099311	chr2	+	2679	8	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	1	intron_retention	FALSE	canonical	3	1993	junction_1	211.243548385966	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130119891_130120075_130120211_130120816
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099312	chr2	+	2199	11	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	1	intron_retention	FALSE	canonical	3	1876	junction_8	240.71859088986	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119545_130119768_130119891_130120075_130120211_130120816
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099317	chr2	+	2888	9	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	1	intron_retention	FALSE	canonical	3	1876	junction_7	268.766511120712	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951_130119545_130119768_130119891_130120075
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099319	chr2	+	2805	10	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	1	intron_retention	FALSE	canonical	3	1876	junction_8	253.734964281168	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119545_130119768_130119891_130120075
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099322	chr2	+	1980	13	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_12	803.725630354594	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120332_130120452_130120816
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099326	chr2	+	2157	13	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	83	junction_12	945.36081809481	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119235_130119395_130119545_130119768_130119891_130120075_130120211_130120332_130120452_130120816
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099341	chr2	+	2766	10	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	1	intron_retention	FALSE	canonical	3	433	junction_9	646.991289272941	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951_130119545_130119768_130119891_130120075_130120211_130120332
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099345	chr2	+	2345	12	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	433	junction_11	590.287953263994	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120332
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099361	chr2	+	1938	11	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1876	junction_8	241.9110580358	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTATGTGTGTATTTTGT	NA	False	NA	25	True	AATAAA	-14	NA	130116365	130121227	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120816
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099364	chr2	+	2282	10	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	1	intron_retention	FALSE	canonical	3	1876	junction_7	253.395508939321	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951_130119545_130119768_130119891_130120075_130120211_130120816
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099373	chr2	+	2945	7	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1993	junction_1	225.275695291101	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130119891_130120075_130120211_130120816
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099412	chr2	-	1517	12	FSM	ENSMUSG00000027406.14	ENSMUST00000028892.11	1616	12	99	0	13	0	multi-exon	FALSE	canonical	3	745	junction_6	49.1089192551946	451	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTTGTGTTTTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	130126368	130121228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_130121647_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099430	chr2	-	2391	14	FSM	ENSMUSG00000027408.8	ENSMUST00000028897.8	2366	14	-25	0	-25	0	multi-exon	FALSE	canonical	3	131	junction_8	18.681383322448	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCTTGAGTTCCTATTC	NA	False	NA	-3	True	ATTAAA	-19	NA	130239519	130232694	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_130233063_130233157_130233261_130234990_130235131_130235303_130235602_130235685_130235866_130235951_130236149_130236229_130236354_130236656_130236746_130236841_130236993_130237555_130237644_130237748_130237889_130238027_130238138_130238250_130238413_130239278
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099436	chr2	+	178	1	Intergenic	novelGene_3075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTGCTATTTATTCT	NA	False	NA	NA	False	NA	NA	NA	130255869	130256047	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_130255900_130256000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099440	chr2	+	2670	24	FSM	ENSMUSG00000027411.18	ENSMUST00000028900.11	3161	24	-42	533	-16	2	multi-exon	FALSE	canonical	0	0	junction_15	83.6383654878219	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTGTATGCTGTCTGGC	NA	False	NA	23	True	AATAAA	-23	NA	130266242	130285656	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282283_130282371_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099455	chr2	+	2726	23	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_14	85.518025261509	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTTGTATGCTGTCTG	NA	False	NA	21	True	AATAAA	-21	NA	130266273	130285654	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099462	chr2	+	3235	21	FSM	ENSMUSG00000027303.19	ENSMUST00000028769.14	5325	21	-8	2098	-8	3	multi-exon	FALSE	canonical	3	182	junction_14	22.4438744427071	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCGGTCCCTTTGTCTTGG	NA	False	NA	15	True	AATAAA	-23	NA	130292189	130395946	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_130292479_130345393_130345473_130345913_130346256_130359650_130359736_130360869_130360944_130361291_130361429_130374008_130374100_130375003_130375081_130377242_130377280_130379471_130379570_130381554_130381675_130382402_130382570_130383214_130383351_130384226_130384377_130385989_130386084_130386340_130386418_130386868_130387004_130391404_130391531_130391610_130391763_130394116_130394253_130395313
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099470	chr2	+	991	4	FSM	ENSMUSG00000037740.9	ENSMUST00000145614.2	4278	4	-14	3301	-14	0	multi-exon	FALSE	canonical	3	506	junction_2	32.273139846559	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCCCATTTACTGGCT	371	False	NA	14	True	NA	NA	NA	130405647	130407314	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_130405911_130406000_130406148_130406227_130406352_130406857
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099472	chr2	+	1061	3	FSM	ENSMUSG00000037740.9	ENSMUST00000046149.9	1057	3	-4	0	-4	0	multi-exon	FALSE	canonical	3	543	junction_1	21	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCCCATTTACTGGCT	381	False	NA	14	True	NA	NA	NA	130405657	130407314	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_130405911_130406000_130406352_130406857
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099488	chr2	+	207	1	ISM	ENSMUSG00000037740.9	ENSMUST00000145614.2	4278	4	3648	1099	3648	-1099	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGGAAAGATGACATCAG	2791	False	NA	NA	False	NA	NA	NA	130409309	130409516	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_+_130409300_130409500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099497	chr2	-	2529	7	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	10	-1328	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_5	32.7078821624934	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGATTCCTCCTAGCACA	NA	False	NA	NA	False	AATAAA	-19	NA	130471937	130433249	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130470408_130470556_130471835
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099500	chr2	-	2372	6	FSM	ENSMUSG00000027300.11	ENSMUST00000028761.5	3731	6	31	1328	20	-1328	multi-exon	TRUE	canonical	3	59	junction_5	36.0477461153953	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGATTCCTCCTAGCACA	NA	False	NA	NA	False	AATAAA	-19	NA	130471927	130433249	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130471835
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099545	chr2	-	1133	9	FSM	ENSMUSG00000068290.12	ENSMUST00000089559.11	1238	9	34	71	34	4	multi-exon	FALSE	canonical	0	0	junction_6	130.411607995608	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTTGTTTGTAGAAGAC	NA	False	NA	0	True	ATTAAA	-20	NA	130506545	130495950	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_130496243_130496581_130496631_130497105_130497163_130500219_130500259_130500508_130500632_130503656_130503759_130503996_130504110_130505267_130505475_130506394
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099555	chr2	+	1206	8	FSM	ENSMUSG00000074797.12	ENSMUST00000103193.5	1390	8	192	-8	-3	8	multi-exon	TRUE	canonical	3	338	junction_5	87.1842992792643	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGAGTTTCCTTTGAC	5427	False	NA	26	True	AATAAA	-26	NA	130509721	130523542	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_130509856_130513320_130513379_130513475_130513541_130513979_130514054_130516158_130516191_130517548_130517665_130521254_130521332_130522892
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099564	chr2	-	3159	21	FSM	ENSMUSG00000074796.11	ENSMUST00000099362.11	3196	21	43	-6	-7	6	multi-exon	FALSE	canonical	3	76	junction_7	21.856063231973	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGCCCTCCCTGGTACTCC	NA	False	NA	5	True	AATAAA	-28	NA	130539396	130526026	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130538567_130538676_130539278
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099571	chr2	-	3044	20	NIC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_19	27.8455375458768	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCGCCCTCCCTGG	NA	False	NA	-1	True	AATAAA	-22	NA	130539395	130526032	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130539278
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099583	chr2	-	6626	37	FSM	ENSMUSG00000027309.19	ENSMUST00000044766.15	6628	37	2	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	14.9720933822533	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTCTCTGCCTGTCTC	NA	False	NA	NA	False	AATAAA	-18	NA	130682052	130548119	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_130551239_130551857_130551952_130552731_130552798_130554179_130554383_130554871_130554947_130555316_130555424_130559180_130559268_130561759_130561896_130569067_130569106_130572708_130572835_130578386_130578546_130579298_130579388_130580900_130581019_130581290_130581390_130582320_130582410_130583736_130583884_130590604_130590709_130606372_130606461_130607607_130607659_130609529_130609601_130612591_130612710_130616978_130617025_130617646_130617692_130619124_130619202_130620336_130620425_130626343_130626381_130627378_130627461_130633771_130633908_130635908_130635965_130640086_130640186_130648790_130648869_130652741_130652849_130654764_130654862_130656098_130656224_130662388_130662509_130664340_130664421_130681883
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099590	chr2	+	177	1	Intergenic	novelGene_3076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGGAACAGGGAA	NA	False	NA	NA	False	NA	NA	NA	130603385	130603562	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_130603400_130603600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099607	chr2	+	188	1	Intergenic	novelGene_3077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGTCATGGATGAATTG	NA	False	NA	NA	False	NA	NA	NA	130758155	130758343	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_130758200_130758300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099612	chr2	+	207	1	Intergenic	novelGene_3078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACATATTAACAGTATT	NA	False	NA	NA	False	NA	NA	NA	130859453	130859660	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_130859500_130859700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099625	chr2	-	1324	6	FSM	ENSMUSG00000027327.17	ENSMUST00000103188.10	1241	6	-68	-15	-7	14	multi-exon	FALSE	canonical	3	656	junction_1	33.1336686770421	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGGGTTTTTTGTTCTCT	NA	False	NA	0	True	AATAAA	-29	NA	131002008	130988229	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_130988896_130989080_130989204_130990075_130990215_130993537_130993681_130995513_130995631_131001872
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099639	chr2	-	2790	1	FSM	ENSMUSG00000068267.6	ENSMUST00000089510.5	4886	1	-11	2107	-11	-2107	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGCATCCTTCATGGTCT	3155	False	NA	0	True	AATAAA	-45	NA	131021998	131019208	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_131019200_131022000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099663	chr2	+	1588	3	FSM	ENSMUSG00000068264.12	ENSMUST00000110208.8	1521	3	-67	0	3	0	multi-exon	FALSE	canonical	3	39	junction_2	10	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTCTTTTTGTGCG	NA	False	NA	11	True	ATTAAA	-17	NA	131052292	131055434	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_131052602_131053182_131053394_131054366
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099664	chr2	+	1377	2	FSM	ENSMUSG00000068264.12	ENSMUST00000134086.2	868	2	3	-512	3	0	multi-exon	FALSE	canonical	3	35	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTCTTTTTGTGCG	NA	False	NA	11	True	ATTAAA	-17	NA	131052292	131055434	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_131052602_131054366
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099677	chr2	+	4178	7	FSM	ENSMUSG00000037523.14	ENSMUST00000041362.12	2867	7	-1311	0	-1307	0	multi-exon	FALSE	canonical	3	174	junction_4	7.24377127070024	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGAGTTCCAAATTTC	5953	False	NA	14	True	ATTAAA	-19	NA	131074675	131089945	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_131076048_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099691	chr2	+	3071	7	FSM	ENSMUSG00000037523.14	ENSMUST00000110199.3	3057	7	-14	0	-14	0	multi-exon	FALSE	canonical	3	32	junction_1	57.107111835762	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGAGTTCCAAATTTC	7288	False	NA	14	True	ATTAAA	-19	NA	131076010	131089945	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_131076276_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099700	chr2	+	4280	7	FSM	ENSMUSG00000037514.19	ENSMUST00000150843.9	4266	7	-14	0	-9	0	multi-exon	FALSE	canonical	3	323	junction_2	97.0093065409477	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGCTTGCATGTA	855	False	NA	5	True	AATAAA	-19	NA	131104405	131141108	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_131104736_131115830_131116184_131122076_131122331_131124511_131124689_131129393_131129518_131135318_131135445_131138192
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099709	chr2	+	4015	6	NIC	ENSMUSG00000037514.19	novel	4266	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	205.341082104873	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGTTTGCTTGCATG	864	False	NA	3	True	AATAAA	-17	NA	131104414	131141106	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_131104736_131115830_131116184_131124511_131124689_131129393_131129518_131135318_131135445_131138192
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099710	chr2	+	1632	7	FSM	ENSMUSG00000037514.19	ENSMUST00000184105.9	1398	7	-30	-204	0	1	multi-exon	FALSE	canonical	0	0	junction_2	197.100651106653	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGGAGGTCATCTTTC	864	False	NA	14	True	NA	NA	NA	131104414	131138612	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_131104736_131115830_131116041_131122076_131122331_131124511_131124689_131129393_131129518_131135318_131135445_131138192
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099733	chr2	+	2161	7	FSM	ENSMUSG00000027333.19	ENSMUST00000028806.12	2270	7	98	11	-61	0	multi-exon	FALSE	canonical	3	113	junction_6	10.8269211792745	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCTTCTCTCCTCAG	NA	False	NA	20	True	AATAAA	-21	NA	131333781	131367092	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362331_131363092_131363978_131364140_131366662
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099758	chr2	-	4687	11	FSM	ENSMUSG00000027339.16	ENSMUST00000028814.15	8233	11	109	3437	109	0	multi-exon	FALSE	canonical	1	8	junction_10	8.85494212290515	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCCCTGTGGATCTGCTT	NA	False	NA	0	True	AATAAA	-15	NA	131871812	131834771	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_131838374_131840164_131840263_131842352_131842475_131843605_131843658_131844801_131844904_131846218_131846380_131847227_131847317_131849285_131849438_131851605_131851682_131854481_131854573_131871670
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099767	chr2	-	3597	1	ISM	ENSMUSG00000027340.16	ENSMUST00000028815.15	6364	16	89016	0	593	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTTGTCATTTGCCTC	NA	False	NA	-1	True	AATAAA	-17	NA	131898012	131894415	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_-_131894400_131898000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099788	chr2	-	1556	4	FSM	ENSMUSG00000027341.11	ENSMUST00000110163.8	1551	4	-5	0	-5	0	multi-exon	FALSE	canonical	3	93	junction_3	223.123782287371	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGTTGTTATTGAT	4903	False	NA	-2	True	TATAAA	-20	NA	132089694	132081411	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089515
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099790	chr2	-	1591	4	FSM	ENSMUSG00000027341.11	ENSMUST00000028816.9	1612	4	21	0	2	0	multi-exon	FALSE	canonical	3	556	junction_2	26.7332502076846	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGTTGTTATTGAT	4891	False	NA	-2	True	TATAAA	-20	NA	132089706	132081411	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089492
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099812	chr2	-	2608	5	NIC	ENSMUSG00000027342.15	novel	1518	6	NA	NA	132	-124	intron_retention	FALSE	canonical	3	1968	junction_1	228.570968191501	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCAGTGCCGCCTTTGT	8357	False	NA	-3	True	AATAAA	-21	NA	132095102	132091205	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_132091616_132091693_132093359_132093610_132093679_132093822_132093921_132094735
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099823	chr2	+	8247	14	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	14	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	118.061161563922	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGCGTGTTTTTTGAT	5258	False	NA	NA	False	AATAAA	-17	NA	132105081	132153970	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099832	chr2	+	3559	14	NNC	ENSMUSG00000058793.15	novel	8073	13	NA	NA	-49	2294	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	131.49004957066	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGTGTTTGTCACTTGT	NA	False	NA	21	True	AATAAA	-26	NA	132127809	132149542	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_132127886_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099840	chr2	-	181	1	Intergenic	novelGene_3079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAGATTCTACCTTGA	NA	False	NA	NA	False	NA	NA	NA	132131035	132130854	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_132130900_132131000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099870	chr2	+	1044	3	FSM	ENSMUSG00000044991.11	ENSMUST00000061891.11	1076	3	32	0	32	0	multi-exon	FALSE	canonical	3	37	junction_1	20.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGACTCAGTCTATTTC	NA	False	NA	27	True	NA	NA	NA	132528882	132592975	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_132528902_132533869_132534052_132592132
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099899	chr2	+	1952	7	FSM	ENSMUSG00000027357.17	ENSMUST00000028835.13	1924	7	-22	-6	-22	6	multi-exon	FALSE	canonical	3	562	junction_2	81.1632442810305	385	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCCTGTGGTGTGTGTT	1600	False	NA	19	True	AATAAA	-34	NA	132688563	132708711	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_132689046_132691785_132691924_132696812_132696943_132703128_132703215_132704254_132704324_132706009_132706102_132707756
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099913	chr2	+	211	1	Intergenic	novelGene_3080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCCAAGCCTTTGTCCT	NA	False	NA	NA	False	NA	NA	NA	134371662	134371873	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_134371700_134371900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099918	chr2	-	5164	8	FSM	ENSMUSG00000034723.12	ENSMUST00000038228.11	5488	8	11	313	-2	-313	multi-exon	FALSE	canonical	3	29	junction_5	5.36808406515884	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTCTGTGTTTATTCT	2703	False	NA	NA	False	AAAAAG	-3	NA	134486054	134436417	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_134440786_134441929_134441994_134442807_134442910_134451450_134451497_134462474_134462604_134463307_134463354_134481641_134481758_134485761
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099924	chr2	+	207	1	Intergenic	novelGene_3081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACAATATTAACAGAATAA	NA	False	NA	NA	False	NA	NA	NA	135275060	135275267	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_135275100_135275300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099926	chr2	+	422	5	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	252.149137416728	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135488442	135493987	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_135488469_135490846_135490892_135491052_135491123_135493417_135493478_135493766
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099929	chr2	+	386	5	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	4	at_least_one_novel_splicesite	FALSE	canonical	3	337	junction_4	128.141523324799	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135488442	135493987	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_135488469_135490846_135490892_135491052_135491123_135493417_135493442_135493766
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099930	chr2	+	352	4	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	189.688048003968	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	False	NA	29	True	AATAAA	-39	NA	135488442	135493987	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_135488469_135490846_135490892_135493417_135493478_135493766
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000099966	chr2	-	2964	6	FSM	ENSMUSG00000027274.17	ENSMUST00000110089.9	3178	6	214	0	-21	0	multi-exon	FALSE	canonical	3	83	junction_3	119.159389055164	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTATACAATCCTTACTA	NA	False	NA	0	True	AATAAA	-20	NA	136733095	136715699	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_136716627_136718008_136718120_136719534_136719711_136722170_136723560_136727392_136727621_136732962
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100002	chr2	+	209	1	Intergenic	novelGene_3082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGGGCTCTGGTTCAT	NA	False	NA	NA	False	NA	NA	NA	139947438	139947647	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_139947400_139947600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100032	chr2	+	1046	11	NNC	ENSMUSG00000027384.7	novel	1166	11	NA	NA	-19	4	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_6	69.9549140518377	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTTTCCCAGAATTTT	NA	False	NA	15	True	AATAAA	-15	NA	140012613	140045556	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_140012854_140013946_140013988_140019153_140019218_140023493_140023542_140025817_140025922_140029663_140029704_140030656_140030833_140035502_140035564_140044785_140044870_140045207_140045291_140045451
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100037	chr2	+	225	1	Intergenic	novelGene_3083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTATGTCAGCCAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	140294897	140295122	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_140294900_140295100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100041	chr2	-	3977	3	FSM	ENSMUSG00000051379.13	ENSMUST00000110057.3	3977	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	10.5	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTGTATCCTTTTTACT	NA	False	NA	1	True	AATAAA	-36	NA	140513389	140500117	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_140503672_140505180_140505380_140513165
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100051	chr2	+	199	1	Intergenic	novelGene_3084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTCCAAGAAGATAAAGTAA	NA	False	NA	NA	False	NA	NA	NA	141412425	141412624	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_141412400_141412600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100066	chr2	+	191	1	Intergenic	novelGene_3085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTACTGAAGCTGTACT	NA	False	NA	NA	False	NA	NA	NA	142697612	142697803	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_142697600_142697800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100074	chr2	+	957	7	FSM	ENSMUSG00000008333.13	ENSMUST00000008477.13	2061	7	0	1104	0	-1104	multi-exon	FALSE	canonical	3	784	junction_1	113.59540777103	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTTATTGTCCTATCAT	1988	False	NA	22	True	AATAAA	-22	NA	142904958	142913669	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_142905019_142906461_142906551_142907095_142907269_142910180_142910322_142911293_142911345_142912807_142912897_142913315
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100098	chr2	-	5188	24	FSM	ENSMUSG00000027422.16	ENSMUST00000016072.12	5177	24	-11	0	-11	0	multi-exon	FALSE	canonical	3	227	junction_23	53.514586460919	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTTCTGTCTGATCTT	9747	False	NA	-1	True	ATTAAA	-20	NA	143853194	143789314	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143832187_143852918
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100122	chr2	-	2640	13	FSM	ENSMUSG00000027423.16	ENSMUST00000028909.5	2419	13	-221	0	-9	0	multi-exon	FALSE	canonical	3	1195	junction_10	117.133352305064	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTTCTGACTGTTTT	NA	False	NA	NA	False	AAGAAA	-16	NA	144112713	144092042	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100136	chr2	+	203	1	Intergenic	novelGene_3086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAATCTGAAATGCCCTCC	NA	False	NA	NA	False	NA	NA	NA	144093988	144094191	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_144094000_144094200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100147	chr2	+	2831	5	FSM	ENSMUSG00000027424.12	ENSMUST00000028910.9	2840	5	14	-5	14	5	multi-exon	FALSE	canonical	3	360	junction_1	65.1517459474418	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTATTTATAGGGTGATT	NA	False	NA	NA	False	AATAAA	-25	NA	144112833	144123152	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_144112993_144113834_144114405_144118234_144118452_144120913_144121047_144121400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100149	chr2	+	2056	5	FSM	ENSMUSG00000027424.12	ENSMUST00000110028.8	2308	5	252	0	15	0	multi-exon	FALSE	canonical	3	74	junction_1	188.862383761299	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTCTTTCAGTGGACC	NA	False	NA	14	True	AATAAA	-16	NA	144112834	144122436	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_144112935_144113834_144114405_144118234_144118452_144120913_144121047_144121400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100177	chr2	+	3795	11	FSM	ENSMUSG00000027425.19	ENSMUST00000028911.15	3801	11	-15	21	-15	-20	multi-exon	FALSE	canonical	1	121	junction_10	80.6347319707829	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGGCTGCAGCCTAGTC	NA	False	NA	19	True	AATAAA	-25	NA	144210887	144249575	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100182	chr2	+	3668	10	NIC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	-10	-20	intron_retention	FALSE	canonical	1	20	junction_3	128.814921304239	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGGCTGCAGCCTAGTC	NA	False	NA	19	True	AATAAA	-25	NA	144210892	144249575	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_144211078_144215110_144215776_144217764_144217884_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100197	chr2	+	914	2	FSM	ENSMUSG00000098387.3	ENSMUST00000183618.3	693	2	9	-230	9	230	multi-exon	FALSE	canonical	3	459	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATCATTATTATTATTA	NA	False	NA	17	True	AATAAA	-18	NA	144210924	144215871	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_144211078_144215110
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100209	chr2	-	2148	5	FSM	ENSMUSG00000027428.10	ENSMUST00000028915.6	2170	5	22	0	22	0	multi-exon	FALSE	canonical	3	248	junction_1	20.0873094266007	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGACTGCTGTGGTGC	NA	False	NA	-9	True	AATAAA	-20	NA	144392767	144384184	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_144385930_144386293_144386380_144389913_144390020_144391023_144391067_144392599
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100215	chr2	+	2776	20	NIC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	371	junction_1	64.9806278398403	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGATTTTGTCTCATTTT	NA	False	NA	NA	False	AATAAA	-37	NA	144398160	144432669	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_144398245_144401126_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100224	chr2	+	2790	20	FSM	ENSMUSG00000027429.17	ENSMUST00000028916.15	2779	20	-11	0	-11	0	multi-exon	FALSE	canonical	3	154	junction_1	107.06740569791	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGATTTTGTCTCATTTT	NA	False	NA	NA	False	AATAAA	-37	NA	144398164	144432669	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_144398263_144401126_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100245	chr2	+	213	1	Intergenic	novelGene_3087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGCACCACCATGTGCGA	NA	False	NA	NA	False	NA	NA	NA	144402796	144403009	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_144402800_144403000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100256	chr2	+	1259	6	FSM	ENSMUSG00000027430.13	ENSMUST00000028917.7	1350	6	72	19	72	-19	multi-exon	TRUE	canonical	3	290	junction_5	10.373041983912	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTGTGTCTGTTTAAT	NA	False	NA	NA	False	AATAAA	-42	NA	144441888	144610659	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_144442012_144445707_144445799_144459111_144459348_144477677_144477785_144588820_144588994_144610130
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100263	chr2	+	1148	6	FSM	ENSMUSG00000002728.15	ENSMUST00000110000.8	1142	6	-6	0	-6	0	multi-exon	FALSE	canonical	3	961	junction_2	184.608775522725	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTAATCATCCCTGTC	NA	False	NA	31	True	TATAAA	-16	NA	145745154	145758345	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_145745283_145750510_145750536_145753592_145753684_145754312_145754449_145757453_145757600_145757723
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100277	chr2	+	1044	6	FSM	ENSMUSG00000002728.15	ENSMUST00000002805.14	1172	6	21	107	0	-107	multi-exon	FALSE	canonical	3	102	junction_3	436.248094551713	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGGAAGTTTGTTG	NA	False	NA	-43	True	AGTAAA	-18	NA	145745181	145758238	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_145745283_145750510_145750536_145753592_145753714_145754312_145754449_145757453_145757600_145757723
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100290	chr2	+	185	1	Intergenic	novelGene_3088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGTGATTTGTCCATT	NA	False	NA	NA	False	NA	NA	NA	145917402	145917587	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_145917400_145917600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100294	chr2	-	224	1	Intergenic	novelGene_3089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGATGGTGACTTTAGC	NA	False	NA	NA	False	NA	NA	NA	146047394	146047170	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_146047200_146047400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100310	chr2	+	2168	14	FSM	ENSMUSG00000074749.11	ENSMUST00000099278.9	2183	14	16	-1	16	1	multi-exon	FALSE	canonical	3	86	junction_6	16.1728825562271	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCACTGTAATTAGGTGTA	NA	False	NA	NA	False	AATAAA	-16	NA	146697799	146812018	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_146697964_146703039_146703103_146705626_146705790_146712685_146712767_146730940_146731587_146732900_146733205_146777722_146777805_146783929_146784096_146784836_146784900_146792442_146792509_146794897_146794985_146798119_146798217_146811463_146811508_146811876
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100317	chr2	+	192	1	Intergenic	novelGene_3090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCATCTTTCAATAATAT	NA	False	NA	NA	False	NA	NA	NA	146833483	146833675	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_146833500_146833700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100319	chr2	-	186	1	Intergenic	novelGene_3091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAGATGGAACCCAGAC	NA	False	NA	NA	False	NA	NA	NA	146851566	146851380	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_146851400_146851600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100322	chr2	+	3653	30	FSM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	-215	-4	-215	4	multi-exon	TRUE	canonical	3	956	junction_9	74.1082057489866	641	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTCTGGTGTCTGATTAT	NA	False	NA	14	True	AATAAA	-26	NA	146854700	146919924	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100363	chr2	+	942	2	FSM	ENSMUSG00000036992.11	ENSMUST00000047177.4	956	2	16	-2	16	2	multi-exon	FALSE	canonical	3	586	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTCTAAATCTTGAGAAG	NA	False	NA	17	True	AATAAA	-21	NA	148514561	148517949	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_148514756_148517201
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100390	chr2	-	4100	4	FSM	ENSMUSG00000068134.14	ENSMUST00000089207.13	4127	4	27	0	-3	0	multi-exon	FALSE	canonical	3	35	junction_1	10.2089285540757	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGCCTGAGACTCTTCA	NA	False	NA	1	True	NA	NA	NA	149978601	149956325	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_149960121_149961484_149961549_149961744_149961872_149978487
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100403	chr2	+	190	1	Intergenic	novelGene_3092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATATCTGATTTGCAGGT	NA	False	NA	NA	False	NA	NA	NA	150136864	150137054	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_150136900_150137100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100407	chr2	+	4150	4	FSM	ENSMUSG00000095315.3	ENSMUST00000238230.2	2159	4	35	-2026	35	2026	multi-exon	FALSE	canonical	3	122	junction_3	5.43650214343336	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAGGAGGTGTCCTGTGGT	NA	False	NA	7	True	NA	NA	NA	150153385	150170958	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_150153479_150165621_150165749_150165947_150166009_150167089
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100428	chr2	-	2227	9	FSM	ENSMUSG00000033096.8	ENSMUST00000046399.7	2235	9	8	0	8	0	multi-exon	FALSE	canonical	3	74	junction_7	10.0054672554559	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGCTGATTATTACT	1007	False	NA	NA	False	AATAAA	-15	NA	150450479	150424999	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_150426109_150427682_150427876_150428300_150428436_150428911_150429087_150430822_150430940_150431952_150432046_150436221_150436338_150442163_150442281_150450307
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100439	chr2	-	3623	14	FSM	ENSMUSG00000027452.12	ENSMUST00000028944.4	3618	14	-5	0	-5	0	multi-exon	FALSE	canonical	3	167	junction_13	14.5093318267649	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGATGTTTTTGGTTGAC	NA	False	NA	-5	True	AATAAA	-27	NA	150510183	150460024	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_150461713_150463433_150463553_150466718_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766_150479920_150480283_150480460_150484631_150484832_150501755_150501853_150509804
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100457	chr2	+	191	1	Intergenic	novelGene_3093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTGGCCTCATTGGAG	NA	False	NA	NA	False	NA	NA	NA	150474315	150474506	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_150474300_150474500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100463	chr2	-	4810	2	NIC	ENSMUSG00000086563.2	novel	768	3	NA	NA	-32	2840	intron_retention	FALSE	canonical	3	31	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTTATTTGGCATTCTG	NA	False	NA	NA	False	NA	NA	NA	150548828	150543615	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_150548201_150548603
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100472	chr2	+	2536	14	FSM	ENSMUSG00000033068.17	ENSMUST00000094467.6	2540	14	6	-2	6	2	multi-exon	FALSE	canonical	3	112	junction_1	18.2695141678424	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGCCTCATTAGTGAG	NA	False	NA	14	True	AATAAA	-19	NA	150590967	150613597	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_150591154_150594929_150595254_150597962_150598040_150600662_150600807_150602022_150602099_150603152_150603189_150604295_150604385_150605485_150605566_150606034_150606100_150607369_150607472_150608878_150609017_150610784_150610842_150612211_150612325_150612548
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100491	chr2	-	181	1	Intergenic	novelGene_3094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGCAGAAAAGAATCCGAT	5832	False	NA	NA	False	NA	NA	NA	150602699	150602518	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_150602500_150602700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100494	chr2	+	3911	20	FSM	ENSMUSG00000033059.8	ENSMUST00000045441.8	3909	20	-2	0	-2	0	multi-exon	FALSE	canonical	3	120	junction_10	16.3671517531211	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTATCTGCATTTCCA	NA	False	NA	23	True	ATTAAA	-23	NA	150628652	150673678	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_150629031_150643457_150643560_150648112_150648192_150650716_150650821_150653173_150653306_150655310_150655423_150655840_150655924_150656905_150657050_150657537_150657631_150658669_150658817_150659557_150659722_150660765_150660881_150661793_150661896_150662654_150662803_150665895_150665955_150668248_150668391_150669024_150669233_150670363_150670499_150671547_150671615_150672281
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100503	chr2	-	184	1	Intergenic	novelGene_3095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAACAAAAGCACAACG	5783	False	NA	NA	False	NA	NA	NA	150632318	150632134	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_150632100_150632300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100517	chr2	-	1957	13	FSM	ENSMUSG00000032046.16	ENSMUST00000056149.15	1999	13	22	20	12	4	multi-exon	FALSE	canonical	2	181	junction_4	35.7897991363771	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTGTTTTCTCTACAAA	NA	False	NA	-25	True	AATAAA	-18	NA	150746639	150674432	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_150675061_150676198_150676327_150677192_150677272_150679271_150679355_150680234_150680315_150680660_150680699_150681639_150681770_150684165_150684212_150685310_150685342_150688163_150688284_150690271_150690378_150700279_150700405_150746276
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100524	chr2	+	1109	7	FSM	ENSMUSG00000027454.11	ENSMUST00000028948.5	1087	7	-16	-6	-16	6	multi-exon	FALSE	canonical	3	394	junction_1	28.3058690419888	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTGGTAGCTTATCTTT	2406	False	NA	29	True	AATAAA	-36	NA	150751497	150773206	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_150751714_150754700_150754766_150758055_150758155_150759788_150759880_150767801_150767919_150769961_150770037_150772760
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100542	chr2	-	191	1	Intergenic	novelGene_3096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTTAAAGAAAAAGAAA	8452	False	NA	NA	False	NA	NA	NA	150866622	150866431	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_150866400_150866600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100582	chr2	+	1573	5	NIC	ENSMUSG00000032966.15	novel	894	6	NA	NA	-22	-1	combination_of_known_junctions	FALSE	canonical	3	76	junction_4	1013.2641252408	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGAGGTTG	NA	False	NA	24	True	AATAAA	-25	NA	151384482	151403611	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_151384665_151384737_151384786_151399305_151399419_151401377_151401537_151402540
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100608	chr2	-	1747	2	FSM	ENSMUSG00000027459.17	ENSMUST00000062047.6	1754	2	7	0	7	0	multi-exon	FALSE	canonical	3	86	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGGACTCTTCTCTGC	NA	False	NA	-1	True	AATAAA	-22	NA	151822132	151811317	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_151812845_151821912
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100629	chr2	+	201	1	Intergenic	novelGene_3097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAGGAAGAGTTAGACT	NA	False	NA	NA	False	NA	NA	NA	151856969	151857170	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_151857000_151857200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100639	chr2	+	2396	2	FSM	ENSMUSG00000032802.9	ENSMUST00000137751.2	446	2	197	-2147	189	-18	multi-exon	FALSE	canonical	3	20	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCATGCAATAGCCTTAGC	NA	False	NA	13	True	NA	NA	NA	151947632	151953278	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_151947659_151950908
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100644	chr2	+	2600	2	FSM	ENSMUSG00000032802.9	ENSMUST00000041500.8	2812	2	206	6	206	-6	multi-exon	FALSE	canonical	3	134	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTAGCCCAACAGTTTTG	NA	False	NA	25	True	NA	NA	NA	151947649	151953290	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_151947868_151950908
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100650	chr2	+	989	2	FSM	ENSMUSG00000068079.6	ENSMUST00000089112.6	980	2	-9	0	-9	0	multi-exon	FALSE	canonical	3	131	junction_1	0	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGTATCCTGGCTAAG	7080	False	NA	NA	False	AATAAA	-17	NA	151985471	151991017	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_151986059_151990615
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100670	chr2	-	184	1	Intergenic	novelGene_3098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCTACCTTAAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	152073554	152073370	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_152073400_152073600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100689	chr2	+	3367	8	FSM	ENSMUSG00000027465.14	ENSMUST00000028963.14	3386	8	17	2	-6	-2	multi-exon	FALSE	canonical	3	150	junction_1	23.7366503835013	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGTCTTTGTATCATC	NA	False	NA	26	True	AATAAA	-21	NA	152135764	152155914	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_152135961_152144071_152144258_152146865_152146947_152149908_152150096_152150249_152150352_152152305_152152448_152153236_152153425_152153629
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100696	chr2	+	3266	8	NNC	ENSMUSG00000027465.14	novel	3386	8	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	65.5021420431798	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGTCTTTGTATCATC	NA	False	NA	26	True	AATAAA	-21	NA	152135795	152155914	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_152135961_152144071_152144258_152146865_152146947_152149908_152150096_152150249_152150352_152152305_152152378_152153236_152153425_152153629
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100722	chr2	-	2195	11	NIC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	-3	-3	combination_of_known_splicesites	FALSE	canonical	3	58	junction_5	166.375148384607	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGAAAGGTGTCATGCT	NA	False	NA	-15	True	ATTAAA	-13	NA	152174307	152158256	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100743	chr2	-	2087	4	FSM	ENSMUSG00000032715.10	ENSMUST00000040312.7	2026	4	-59	-2	-59	2	multi-exon	FALSE	canonical	3	926	junction_3	7.71722460186015	574	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGTGACTTTCTCTTC	NA	False	NA	-2	True	AATAAA	-31	NA	152186011	152179339	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_152180608_152181634_152181928_152184956_152185248_152185776
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100755	chr2	+	214	1	Intergenic	novelGene_3099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGTGTATTTGATTGACTT	NA	False	NA	NA	False	NA	NA	NA	152196672	152196886	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_152196700_152196900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100764	chr2	-	209	1	Intergenic	novelGene_3100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGATGAGTCTTGGTCTT	NA	False	NA	NA	False	NA	NA	NA	152234133	152233924	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_152233900_152234100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100768	chr2	-	3295	1	FSM	ENSMUSG00000051817.9	ENSMUST00000182625.2	4453	1	-128	1286	-128	-1283	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGGTTCTGCATGTGT	NA	False	NA	-1	True	AATAAA	-21	NA	152240111	152236816	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_152236800_152240100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100776	chr2	+	182	1	Intergenic	novelGene_3101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTGGCCTTGTTGGAA	2215	False	NA	NA	False	NA	NA	NA	152245557	152245739	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_152245600_152245700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100780	chr2	+	181	1	Intergenic	novelGene_3102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAATCTTAAAAAAAAG	7641	False	NA	NA	False	NA	NA	NA	152250983	152251164	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_152251000_152251200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100794	chr2	-	206	1	Intergenic	novelGene_3103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAATAAATAGCTATGCA	NA	False	NA	NA	False	TTTAAA	-4	NA	152266345	152266139	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_152266100_152266300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100798	chr2	+	184	1	Intergenic	novelGene_3104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATTTTTTTATTATAT	3713	False	NA	8	True	NA	NA	NA	152419481	152419665	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_152419500_152419700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100809	chr2	+	210	1	Intergenic	novelGene_3105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACATTACATCTCTTAGA	NA	False	NA	NA	False	NA	NA	NA	152507908	152508118	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_152507900_152508100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100816	chr2	+	1597	12	FSM	ENSMUSG00000019188.17	ENSMUST00000125366.8	5204	12	-11	3618	-11	16	multi-exon	FALSE	canonical	3	117	junction_7	14.82905345753	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTAGTGTTTCGTG	NA	False	NA	37	True	NA	NA	NA	152511369	152546972	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_152511685_152519461_152519561_152522970_152523054_152528017_152528107_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152546541
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100827	chr2	+	194	1	Intergenic	novelGene_3106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGGCAGATTCAGAACC	NA	False	NA	NA	False	NA	NA	NA	152515564	152515758	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_152515600_152515800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100835	chr2	+	930	2	FSM	ENSMUSG00000042745.10	ENSMUST00000038368.9	934	2	4	0	4	0	multi-exon	FALSE	canonical	3	30	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCTGTGACTTCTTGGA	4426	False	NA	13	True	ATTAAA	-17	NA	152578174	152579330	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_152578666_152578891
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100839	chr2	-	2412	3	FSM	ENSMUSG00000007659.19	ENSMUST00000007803.12	2417	3	10	-5	-8	5	multi-exon	FALSE	canonical	3	148	junction_2	89.5	204	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGCTCTGCGCCGCAT	NA	False	NA	0	True	AATAAA	-27	NA	152673638	152622582	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_152624203_152671346_152672023_152673522
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100865	chr2	+	188	1	Intergenic	novelGene_3107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGCTCTTGGATTAAAGG	435	False	NA	NA	False	NA	NA	NA	152685767	152685955	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_152685800_152686000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100872	chr2	+	4168	18	FSM	ENSMUSG00000027469.17	ENSMUST00000109816.8	3483	18	-11	-674	3	7	multi-exon	FALSE	canonical	3	597	junction_2	86.1429969118501	223	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTCATGGTGTCTGT	2697	False	NA	20	True	NA	NA	NA	152689886	152737248	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_152690030_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100932	chr2	+	218	1	Intergenic	novelGene_3108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAATGTTTACCTGTTTT	NA	False	NA	NA	False	ATTAAA	-11	NA	152719310	152719528	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_152719300_152719500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100937	chr2	-	2789	4	NIC	ENSMUSG00000027472.15	novel	1273	5	NA	NA	-12	0	intron_retention	FALSE	canonical	3	235	junction_2	15.7480157480236	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGAGTTGTCACCCACC	8677	False	NA	NA	False	AATAAA	-21	NA	152857309	152850809	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_152851657_152852177_152852259_152854300_152856006_152857153
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100940	chr2	-	1235	5	FSM	ENSMUSG00000027472.15	ENSMUST00000028972.9	1273	5	38	0	-12	0	multi-exon	FALSE	canonical	3	235	junction_2	13.6656503687164	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGAGTTGTCACCCACC	8677	False	NA	NA	False	AATAAA	-21	NA	152857309	152850809	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_152851657_152852177_152852259_152854300_152854376_152855929_152856006_152857153
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100955	chr2	+	2075	13	FSM	ENSMUSG00000003283.16	ENSMUST00000189688.2	2090	13	12	3	12	-3	multi-exon	FALSE	canonical	3	76	junction_9	8.17346655682615	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGGGTCAGCTTCTCTG	NA	False	NA	14	True	AATAAA	-24	NA	152950399	152993356	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_152950675_152966089_152966208_152970182_152970226_152970962_152971063_152971763_152971863_152973140_152973245_152975988_152976139_152976543_152976697_152978617_152978798_152980181_152980259_152986338_152986493_152990866_152990999_152992866
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100964	chr2	+	3672	18	FSM	ENSMUSG00000068040.11	ENSMUST00000089027.3	3896	18	227	-3	-11	3	multi-exon	FALSE	canonical	3	350	junction_1	53.5920770883495	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGTGCGGATTGAAGTGT	NA	False	NA	44	True	AATAAA	-33	NA	153003449	153052389	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100969	chr2	+	3664	18	NIC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	123.527310906505	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGGGTGCGGATTGAAG	NA	False	NA	41	True	AATAAA	-30	NA	153003457	153052386	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_153003492_153020805_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000100984	chr2	+	215	1	Intergenic	novelGene_3109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGAGGCAGGAAGGTT	672	False	NA	NA	False	NA	NA	NA	153015278	153015493	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_153015300_153015500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101004	chr2	-	227	1	Intergenic	novelGene_3110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATTCTGCTTTTTCTTTT	NA	False	NA	NA	False	AAAAAG	-16	NA	153123561	153123334	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_153123300_153123600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101014	chr2	+	5612	9	FSM	ENSMUSG00000027475.10	ENSMUST00000028977.7	5635	9	23	0	23	0	multi-exon	FALSE	canonical	3	30	junction_1	5.17052946998661	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTCCTTGTCAGTGAT	7836	False	NA	10	True	AATAAA	-29	NA	153133355	153175310	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_153133425_153158136_153159605_153162194_153162297_153162498_153162622_153162703_153162823_153164731_153164846_153165456_153165563_153171491_153171671_153171978
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101016	chr2	+	196	1	Intergenic	novelGene_3111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAACTCACCTAATATACA	2753	False	NA	NA	False	NA	NA	NA	153150240	153150436	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_153150200_153150400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101019	chr2	+	6995	12	FSM	ENSMUSG00000042548.15	ENSMUST00000227428.2	6981	12	-14	0	-14	0	multi-exon	FALSE	canonical	0	0	junction_2	51.8797082897678	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTCCTTGTCATCTGT	NA	False	NA	7	True	AATAAA	-16	NA	153187734	153245927	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_153188311_153194108_153194192_153198989_153199099_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101028	chr2	+	202	1	Intergenic	novelGene_3112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATACTGACTGCTCTTCCT	9344	False	NA	NA	False	NA	NA	NA	153201145	153201347	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_153201100_153201300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101046	chr2	+	184	1	Intergenic	novelGene_3113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAAAACTCAAAACTCAA	NA	False	NA	NA	False	NA	NA	NA	153404910	153405094	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_153404900_153405100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101067	chr2	+	4022	21	NIC	ENSMUSG00000027478.16	novel	4208	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	20.6421898063166	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCTGTGTGTTTTTTATC	NA	False	NA	26	True	ATTAAA	-18	NA	153491369	153529650	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_153491661_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153528177
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101069	chr2	+	4208	23	FSM	ENSMUSG00000027478.16	ENSMUST00000072997.10	4208	23	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_15	25.158013034314	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCTGTGTGTTTTTTATC	NA	False	NA	26	True	ATTAAA	-18	NA	153491369	153529650	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_153491661_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517648_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153525527_153525598_153526278_153526398_153528177
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101070	chr2	+	4211	23	FSM	ENSMUSG00000027478.16	ENSMUST00000109771.2	3630	23	-167	-414	0	0	multi-exon	FALSE	canonical	3	48	junction_1	22.8903242036621	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCTGTGTGTTTTTTATC	NA	False	NA	26	True	ATTAAA	-18	NA	153491369	153529650	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_153491661_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153525527_153525598_153526278_153526398_153528177
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101090	chr2	-	185	1	Intergenic	novelGene_3114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAAAAGACCCACAGTCG	NA	False	NA	NA	False	NA	NA	NA	153572773	153572588	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_153572600_153572800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101097	chr2	+	7335	7	FSM	ENSMUSG00000027479.15	ENSMUST00000028981.9	7336	7	8	-7	8	7	multi-exon	FALSE	canonical	3	1002	junction_3	91.867204884732	275	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTGTTTGGTTTATGG	NA	False	NA	NA	False	AATAAA	-27	NA	153583201	153615237	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101109	chr2	+	1037	1	FSM	ENSMUSG00000083097.4	ENSMUST00000118786.2	435	1	-117	-485	-117	485	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACTCCATGACCAAGATA	NA	False	NA	NA	False	NA	NA	NA	153667973	153669010	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_153668000_153669000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101127	chr2	-	1984	14	FSM	ENSMUSG00000027487.12	ENSMUST00000028990.10	1970	14	-8	-6	4	0	multi-exon	FALSE	canonical	3	80	junction_3	9.02265393460642	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGTCTACTTTTTTCA	5672	False	NA	-9	True	AATAAA	-18	NA	154214647	154177299	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_154177538_154184220_154184362_154187785_154187936_154190570_154190702_154192737_154192794_154194101_154194200_154195109_154195341_154196009_154196131_154202476_154202688_154207881_154207983_154210133_154210169_154210731_154210836_154212555_154212876_154214600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101132	chr2	+	176	1	Antisense	novelGene_ENSMUSG00000027487.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAATTAGAAAAACAAACAA	785	False	NA	NA	False	NA	NA	NA	154214890	154215066	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr2_+_154214900_154215100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101134	chr2	-	2121	8	FSM	ENSMUSG00000027488.13	ENSMUST00000109728.8	2131	8	10	0	-8	0	multi-exon	FALSE	canonical	3	100	junction_7	15.9808558939138	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTCTGTGGTTTGTGTC	NA	False	NA	1	True	AATAAA	-30	NA	154250009	154218232	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_154218829_154218926_154219115_154219927_154220125_154222593_154222725_154222830_154223039_154225699_154225905_154245641_154245828_154249599
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101144	chr2	+	214	1	Intergenic	novelGene_3115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCGAGCATGGTGGCAC	6309	False	NA	NA	False	NA	NA	NA	154230065	154230279	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_154230100_154230300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101148	chr2	-	179	1	Intergenic	novelGene_3116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAATGTGGATTCTGT	NA	False	NA	NA	False	NA	NA	NA	154230932	154230753	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_154230800_154230900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101158	chr2	+	6163	11	FSM	ENSMUSG00000038533.16	ENSMUST00000045270.15	6069	11	-94	0	-80	0	multi-exon	TRUE	canonical	3	422	junction_9	50.3348785634772	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGACCAGACCTGGGGAA	5223	False	NA	37	True	AATAAA	-27	NA	154278320	154381276	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101186	chr2	+	190	1	Intergenic	novelGene_3117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAAAATGGTTCTTATTT	NA	False	NA	NA	False	NA	NA	NA	154292735	154292925	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_154292700_154292900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101191	chr2	+	195	1	Intergenic	novelGene_3118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTTCCCGGGCTGGCAA	NA	False	NA	NA	False	NA	NA	NA	154369775	154369970	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_154369800_154370000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101202	chr2	-	3944	6	NIC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	38	1	intron_retention	FALSE	canonical	3	965	junction_5	34.3359869524672	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGGTTTGAAACTCTC	9540	False	NA	-20	True	AATAAA	-17	NA	154411774	154401552	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_154402856_154402950_154403171_154403266_154405011_154405814_154406035_154406337_154406429_154411408
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101211	chr2	+	187	1	Intergenic	novelGene_3119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACAGACTGAGCGAGCC	NA	False	NA	NA	False	NA	NA	NA	154421760	154421947	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_154421800_154421900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101223	chr2	+	177	1	Intergenic	novelGene_3120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGGGGGGGGGGG	6240	False	NA	NA	False	NA	NA	NA	154442707	154442884	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_154442700_154442900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101236	chr2	-	1328	2	Antisense	novelGene_ENSMUSG00000038467.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGGGCTGGAAGAGGG	NA	False	NA	NA	False	NA	NA	NA	154510700	154508285	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr2_-_154509080_154510166
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101238	chr2	+	210	1	Intergenic	novelGene_3121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTATCCTATAACTTGT	NA	False	NA	NA	False	TTTAAA	-1	NA	154520609	154520819	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_154520600_154520800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101252	chr2	+	191	1	Intergenic	novelGene_3122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGGGTCTCCTGTAGCCT	4649	False	NA	NA	False	NA	NA	NA	154608672	154608863	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_154608700_154608900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101261	chr2	+	1537	9	FSM	ENSMUSG00000027593.16	ENSMUST00000058089.13	1747	9	195	15	0	1	multi-exon	FALSE	canonical	3	129	junction_2	14.5945195193264	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTGAGGTGGAATGGTT	NA	False	NA	8	True	AATAAA	-18	NA	154633271	154709166	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_154633469_154662926_154663010_154699188_154699454_154701597_154701671_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101262	chr2	+	1454	8	FSM	ENSMUSG00000027593.16	ENSMUST00000109701.10	1709	8	256	-1	0	1	multi-exon	FALSE	canonical	3	70	junction_1	30.0557305480255	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTGAGGTGGAATGGTT	NA	False	NA	8	True	AATAAA	-18	NA	154633271	154709166	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_154633469_154699188_154699454_154701597_154701671_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101264	chr2	+	1585	10	FSM	ENSMUSG00000027593.16	ENSMUST00000029120.14	1802	10	219	-2	0	1	multi-exon	FALSE	canonical	3	28	junction_4	48.6369772452561	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTGAGGTGGAATGGTT	NA	False	NA	8	True	AATAAA	-18	NA	154633271	154709166	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_154633469_154662926_154663010_154699188_154699454_154701597_154701671_154701830_154701879_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101286	chr2	-	2522	9	FSM	ENSMUSG00000074656.13	ENSMUST00000099173.11	2542	9	25	-5	25	5	multi-exon	FALSE	canonical	3	11792	junction_7	843.012372017754	1539	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTTTTGTGTGTTGTGTT	3657	False	NA	-3	True	AATAAA	-37	NA	154734830	154713324	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101305	chr2	+	215	1	Intergenic	novelGene_3123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCCATGTGGGAAGATAA	NA	False	NA	NA	False	NA	NA	NA	154782717	154782932	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_154782700_154782900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101315	chr2	-	2504	10	FSM	ENSMUSG00000027597.16	ENSMUST00000054607.16	2543	10	41	-2	-9	2	multi-exon	FALSE	canonical	0	0	junction_6	366.363443645113	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTAAGTACCCTCTGTT	NA	False	NA	-6	True	AATAAA	-32	NA	154916376	154901227	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_154902501_154904068_154904264_154905699_154905818_154905908_154905997_154906073_154906282_154906733_154906847_154907456_154907607_154909242_154909319_154910747_154910939_154916284
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101328	chr2	+	195	1	Intergenic	novelGene_3124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGCAAACTAGGAC	NA	False	NA	NA	False	NA	NA	NA	154918974	154919169	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_154919000_154919200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101334	chr2	+	189	1	Intergenic	novelGene_3125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACAATTGGTTATTGATA	NA	False	NA	NA	False	NA	NA	NA	154926989	154927178	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_154927000_154927200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101348	chr2	+	5158	25	FSM	ENSMUSG00000027598.17	ENSMUST00000029126.15	5159	25	1	0	1	0	multi-exon	FALSE	canonical	3	134	junction_8	21.5151351765836	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGCCTTTTCGTCTGCT	NA	False	NA	57	True	AATAAA	-17	NA	154975429	155068775	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_154975506_154980115_154980193_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101359	chr2	+	217	1	Intergenic	novelGene_3126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCTTATTTTAGGTATT	1651	False	NA	NA	False	TTTAAA	-1	NA	155015210	155015427	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_155015200_155015400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101366	chr2	+	682	4	FSM	ENSMUSG00000047459.15	ENSMUST00000109682.9	684	4	2	0	2	0	multi-exon	FALSE	canonical	3	1428	junction_1	142.385236438177	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTGTCTTTACTAGA	NA	False	NA	19	True	AGTAAA	-21	NA	155078456	155092197	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_155078538_155084650_155084727_155089690_155089859_155091840
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101395	chr2	+	188	1	Intergenic	novelGene_3127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCGCAATCAGCAATTCT	1464	False	NA	NA	False	NA	NA	NA	155134990	155135178	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_155135000_155135200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101407	chr2	+	176	1	Intergenic	novelGene_3128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCGGAGCAAGACGACCA	8898	False	NA	NA	False	NA	NA	NA	155208515	155208691	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_155208500_155208700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101412	chr2	-	190	1	Intergenic	novelGene_3129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTTTAAAGGAGATTG	NA	False	NA	NA	False	NA	NA	NA	155210811	155210621	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_155210600_155210800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101449	chr2	-	185	1	Intergenic	novelGene_3130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGAAAGGATTAGTAAA	NA	False	NA	NA	False	NA	NA	NA	155234769	155234584	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_155234600_155234800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101452	chr2	-	186	1	Intergenic	novelGene_3131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACGCCTGACAGTAAAG	NA	False	NA	NA	False	NA	NA	NA	155283668	155283482	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_155283500_155283700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101455	chr2	+	191	1	Intergenic	novelGene_3132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTAATTATGTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	155321720	155321911	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_155321700_155321900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101462	chr2	+	2853	18	FSM	ENSMUSG00000027605.19	ENSMUST00000029135.15	2931	18	78	0	-7	0	multi-exon	FALSE	canonical	2	49	junction_8	8.02030295659528	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTTTTTAGGTATCTG	2085	False	NA	19	True	AATAAA	-23	NA	155359945	155404666	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_155360205_155363900_155364097_155391110_155391203_155391395_155391500_155391718_155391792_155392022_155392099_155392274_155392390_155397773_155397912_155398252_155398424_155398697_155398832_155399016_155399150_155399229_155399287_155399468_155399550_155400510_155400620_155402541_155402611_155402949_155403127_155403665_155403741_155403872
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101472	chr2	-	1936	13	FSM	ENSMUSG00000027610.18	ENSMUST00000079691.13	1963	13	30	-3	30	3	multi-exon	FALSE	canonical	3	779	junction_12	109.121491925285	448	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTGTTTCATGTACCAA	8380	False	NA	1	True	AATAAA	-22	NA	155434700	155405097	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155434613
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101492	chr2	-	3219	19	FSM	ENSMUSG00000038324.14	ENSMUST00000041059.12	3204	19	-17	2	-17	-2	multi-exon	TRUE	canonical	3	309	junction_12	37.6501520663235	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGACTTTGTCCATGAT	NA	False	NA	5	True	ATTAAA	-40	NA	155534321	155476192	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338_155492506_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101504	chr2	-	3116	19	FSM	ENSMUSG00000038324.14	ENSMUST00000103140.5	3091	19	0	-25	0	-12	multi-exon	FALSE	canonical	3	16	junction_11	88.2006865682525	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGATGTGGACCTGACTT	NA	False	NA	-5	True	AATAAA	-39	NA	155534252	155476202	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338_155492482_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101510	chr2	+	193	1	Intergenic	novelGene_3133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTTTCAGGGCTGGAGA	NA	False	NA	NA	False	NA	NA	NA	155511158	155511351	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_155511200_155511400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101529	chr2	+	193	1	Intergenic	novelGene_3134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGCTTTTCAGCACTCAC	6267	False	NA	NA	False	NA	NA	NA	155574443	155574636	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_155574400_155574600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101539	chr2	-	1288	6	FSM	ENSMUSG00000027613.16	ENSMUST00000029142.15	1500	6	210	2	51	-2	multi-exon	TRUE	canonical	3	1052	junction_5	244.745255316625	587	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGTGCTGTGTGTGTGT	NA	False	NA	-5	True	ATTAAA	-20	NA	155668635	155661753	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_155662032_155664756_155664939_155665111_155665289_155665784_155665961_155668044_155668131_155668246
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101551	chr2	-	2417	10	FSM	ENSMUSG00000005882.19	ENSMUST00000109636.11	2633	10	245	-29	-5	2	multi-exon	FALSE	canonical	3	315	junction_1	57.3294572333165	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCTGGAATGGATGGAAA	NA	False	NA	-29	True	AATAAA	-22	NA	155771985	155688811	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554_155763648_155771932
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101586	chr2	+	191	1	Intergenic	novelGene_3135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGATTCTTGAACACACA	3585	False	NA	NA	False	NA	NA	NA	155872821	155873012	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_155872800_155873000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101594	chr2	-	3471	16	FSM	ENSMUSG00000074643.13	ENSMUST00000109607.10	3441	16	-26	-4	0	1	multi-exon	FALSE	canonical	3	257	junction_15	28.8510350286124	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCCGCTCTTGTTGTGTT	NA	False	NA	1	True	AATAAA	-22	NA	155953885	155913760	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155953705
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101605	chr2	-	3495	17	FSM	ENSMUSG00000074643.13	ENSMUST00000109608.9	3492	17	0	-3	0	1	multi-exon	FALSE	canonical	3	55	junction_15	81.3740399328926	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGGCCGCTCTTGTTGT	NA	False	NA	-2	True	AATAAA	-19	NA	155953863	155913763	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155945268_155945318_155953705
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101612	chr2	-	3342	16	NIC	ENSMUSG00000074643.13	novel	3441	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_15	83.2064634241569	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGGCCGCTCTTGTTG	NA	False	NA	-3	True	AATAAA	-18	NA	155953880	155913764	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155953825
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101621	chr2	-	3976	3	FSM	ENSMUSG00000089824.11	ENSMUST00000109604.9	6635	3	-4	2663	1	-2663	multi-exon	FALSE	canonical	3	132	junction_2	80.5	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTTGACCGCCAAGTT	NA	False	NA	1	True	AATAAA	-25	NA	155953880	155936540	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_155940293_155945268_155945318_155953705
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101636	chr2	+	156	1	Intergenic	novelGene_3136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGAGGTTGGTCTGGACT	NA	False	NA	NA	False	NA	NA	NA	155950120	155950276	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_155950100_155950300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101641	chr2	-	2054	13	FSM	ENSMUSG00000027618.18	ENSMUST00000029147.16	2051	13	0	-3	0	3	multi-exon	TRUE	canonical	3	228	junction_1	23.0952135493242	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAATTTTTGAGCATC	3106	False	NA	1	True	AATAAA	-20	NA	155986106	155965555	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_155966248_155967200_155967291_155968238_155968323_155968930_155969013_155969585_155969692_155970357_155970516_155973572_155973708_155974552_155974647_155976325_155976479_155981648_155981733_155984045_155984163_155985286_155985379_155985939
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101652	chr2	-	235	1	Intergenic	novelGene_3137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTTGATTTTTACAGTAA	5247	False	NA	NA	False	NA	NA	NA	155974208	155973973	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_155974000_155974200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101656	chr2	+	214	1	Intergenic	novelGene_3138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTATTTATTTATTTATT	3322	False	NA	NA	False	NA	NA	NA	155982929	155983143	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_155982900_155983100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101669	chr2	+	386	3	FSM	ENSMUSG00000067847.14	ENSMUST00000088610.11	569	3	180	3	-14	0	multi-exon	FALSE	canonical	3	748	junction_1	118.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAGTCTATTTTTACCTA	6531	False	NA	14	True	AATAAA	-19	NA	155986138	155987714	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_155986201_155986378_155986510_155987521
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101677	chr2	-	2792	17	FSM	ENSMUSG00000027620.17	ENSMUST00000029149.13	2711	17	-71	-10	0	0	multi-exon	FALSE	canonical	3	1090	junction_5	453.136943808105	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022158	155989158	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101694	chr2	-	2808	17	FSM	ENSMUSG00000027620.17	ENSMUST00000109587.9	2810	17	2	0	2	0	multi-exon	FALSE	canonical	3	1358	junction_5	409.933526432945	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022156	155989158	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101754	chr2	-	2037	17	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	198	junction_12	678.943661943869	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGCTCATTATCCC	NA	False	NA	0	True	AATAAA	-15	NA	156022107	155989859	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009509_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101766	chr2	+	233	1	Intergenic	novelGene_3139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTACTTGTTTTGCTCTTC	NA	False	NA	NA	False	TATAAA	-29	NA	156001908	156002141	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_156001900_156002100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101770	chr2	+	203	1	Intergenic	novelGene_3140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTGCTTAGTAAAGAATT	5030	False	NA	NA	False	TTTAAA	-2	NA	156013143	156013346	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_156013100_156013300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101792	chr2	+	178	1	Intergenic	novelGene_3141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGCAGCTGAGGAGATA	NA	False	NA	NA	False	NA	NA	NA	156062208	156062386	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_156062200_156062400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101801	chr2	-	600	2	FSM	ENSMUSG00000046229.11	ENSMUST00000079125.8	803	2	203	0	203	0	multi-exon	FALSE	canonical	3	384	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGCTGTGTCTTGCGTT	NA	False	NA	-4	True	AATAAA	-23	NA	156154464	156153765	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_156154323_156154421
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101809	chr2	-	179	1	Intergenic	novelGene_3142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAAGGCTTAACTTACT	7683	False	NA	NA	False	NA	NA	NA	156172553	156172374	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_156172400_156172600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101837	chr2	-	180	1	Intergenic	novelGene_3143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGAGTCTTTCTCTTGA	NA	False	NA	NA	False	NA	NA	NA	156283086	156282906	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_156282900_156283100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101852	chr2	+	2621	4	FSM	ENSMUSG00000027628.11	ENSMUST00000029158.4	3427	4	-8	814	4	2	multi-exon	FALSE	canonical	3	133	junction_3	2.16024689946929	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCCTGTGTGAGTCTCTT	NA	False	NA	9	True	ATTAAA	-20	NA	156389507	156410078	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_156389804_156392568_156393370_156397746_156397977_156408784
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101854	chr2	+	2756	5	FSM	ENSMUSG00000027628.11	ENSMUST00000109570.8	2766	5	12	-2	0	2	multi-exon	FALSE	canonical	0	0	junction_2	64.1190299365173	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCCTGTGTGAGTCTCTT	NA	False	NA	9	True	ATTAAA	-20	NA	156389515	156410078	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_156389804_156391804_156391948_156392568_156393370_156397746_156397977_156408784
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101876	chr2	+	2414	7	FSM	ENSMUSG00000061689.16	ENSMUST00000099145.6	3402	7	-415	1403	7	5	multi-exon	FALSE	canonical	3	22	junction_1	125.628309796089	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCGTTTCTCACCCTTCAG	NA	False	NA	16	True	ATTAAA	-19	NA	156562996	156604880	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_156564023_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101882	chr2	+	1462	7	NNC	ENSMUSG00000061689.16	novel	4840	13	NA	NA	9489	2	intron_retention	FALSE	canonical	3	40	junction_1	119.417219119448	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGCGTTTCTCACCCTT	NA	False	NA	13	True	ATTAAA	-16	NA	156572900	156604877	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_156572978_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101904	chr2	+	2744	4	FSM	ENSMUSG00000062175.14	ENSMUST00000073352.10	2690	4	-54	0	39	0	multi-exon	FALSE	canonical	3	55	junction_3	80.1373820385967	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTTTTTGTTGTTTCT	NA	False	NA	NA	False	AATAAA	-35	NA	156681965	156697490	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_156682159_156686075_156686302_156695048_156695149_156695265
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101931	chr2	+	1157	4	FSM	ENSMUSG00000027637.4	ENSMUST00000029165.4	1045	4	-111	-1	-111	1	multi-exon	FALSE	canonical	3	1149	junction_1	99.8031395631754	245	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGGCATGCCTGGTAA	4531	False	NA	15	True	AATAAA	-19	NA	156704936	156715484	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_156705338_156707176_156707281_156714257_156714388_156714962
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101955	chr2	+	190	1	Intergenic	novelGene_3144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACTTTGACTACTATTAC	NA	False	NA	NA	False	NA	NA	NA	156826636	156826826	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_156826600_156826800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101963	chr2	-	4088	11	FSM	ENSMUSG00000027635.16_ENSMUSG00000082163.3	ENSMUST00000103129.9	2080	11	-2	-2006	-2	914	multi-exon	FALSE	canonical	3	138	junction_10	28.450131809888	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGCCTTCATTCAGATT	8132	False	NA	NA	False	AATAAA	-16	NA	156848997	156835178	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156847794_156848894
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000101999	chr2	-	4889	22	FSM	ENSMUSG00000027641.14	ENSMUST00000029170.8	4862	22	-27	0	-5	0	multi-exon	TRUE	canonical	3	54	junction_1	43.0171615808876	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGTACTTTTTACTGCT	NA	False	NA	NA	False	NA	NA	NA	157046459	156987812	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_156989597_156992588_156992754_156994815_156994965_157001579_157001659_157003299_157003372_157005458_157005636_157009154_157009367_157011786_157012051_157016694_157016828_157017447_157017613_157019138_157019277_157029854_157029959_157030142_157030256_157033826_157033994_157034995_157035183_157035931_157035982_157037199_157037361_157037460_157037590_157037679_157037745_157038074_157038276_157041335_157041470_157046219
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102015	chr2	+	180	1	Intergenic	novelGene_3145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAATAGTACCAACAA	NA	False	NA	NA	False	NA	NA	NA	157051861	157052041	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_157051900_157052000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102020	chr2	+	2818	17	FSM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	-58	-4	-16	4	multi-exon	TRUE	canonical	3	1870	junction_1	194.730412606121	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTCTGTGATAAAATGC	NA	False	NA	24	True	AATAAA	-21	NA	157120920	157168243	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102036	chr2	+	2361	17	NIC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	10	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	585.730790204638	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGATGGAGCCTTGCAT	NA	False	NA	18	True	AATAAA	-19	NA	157120988	157167977	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_157121133_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102052	chr2	+	2293	18	NIC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	-118	1	combination_of_known_junctions	FALSE	canonical	3	59	junction_16	718.681058375563	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGATGGAGCCTTGCAT	NA	False	NA	18	True	AATAAA	-19	NA	157121227	157167977	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157165142_157165191_157167630
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102062	chr2	+	1107	3	FSM	ENSMUSG00000063019.6	ENSMUST00000081202.6	1107	3	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	136	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGTGTTGCTACTG	5217	False	NA	30	True	AATAAA	-17	NA	157209513	157238683	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_157209561_157220968_157221175_157237829
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102075	chr2	+	200	1	Intergenic	novelGene_3146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAGAGAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	157243702	157243902	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_157243700_157243900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102092	chr2	+	3916	14	FSM	ENSMUSG00000027646.16	ENSMUST00000029175.14	3906	14	-34	24	-34	0	multi-exon	FALSE	canonical	3	53	junction_1	27.1024791983727	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157266165	157313758	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_157266335_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102105	chr2	-	2078	2	FSM	ENSMUSG00000067787.11	ENSMUST00000109528.9	2056	2	-22	0	2	0	multi-exon	FALSE	canonical	3	207	junction_1	0	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGTTTTATGTGGCT	NA	False	NA	-12	True	AATAAA	-16	NA	157408279	157398281	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_157400248_157408167
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102111	chr2	+	196	1	Intergenic	novelGene_3147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATGAGTGGCCGGGCGT	6817	False	NA	NA	False	NA	NA	NA	157409943	157410139	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_157409900_157410100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102115	chr2	-	176	1	Intergenic	novelGene_3148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCAGAATTGAACACTGG	NA	False	NA	0	True	NA	NA	NA	157433945	157433769	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_157433800_157433900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102126	chr2	-	635	2	FSM	ENSMUSG00000087547.2	ENSMUST00000131365.2	629	2	0	-6	0	6	multi-exon	FALSE	canonical	3	113	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGCCAAATATGTATGTA	8707	False	NA	-7	True	NA	NA	NA	157439240	157437496	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_157437906_157439014
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102134	chr2	+	182	1	Intergenic	novelGene_3149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATGACAACTTTG	NA	False	NA	NA	False	NA	NA	NA	157493533	157493715	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_157493500_157493700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102147	chr2	+	1101	1	FSM	ENSMUSG00000062846.8	ENSMUST00000121302.2	477	1	-84	-540	-84	540	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAAGAACAAATGAGTGT	5914	False	NA	NA	False	AATAAA	-42	NA	157743371	157744472	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_157743400_157744500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102155	chr2	-	197	1	Intergenic	novelGene_3150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGTGTGACAAATGTATT	NA	False	NA	NA	False	TTTAAA	-3	NA	157770957	157770760	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_157770800_157771000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102157	chr2	-	3835	8	FSM	ENSMUSG00000027650.13	ENSMUST00000029179.11	3830	8	-1	-4	-1	4	multi-exon	FALSE	canonical	3	173	junction_3	12.5746749055231	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGATTTATTTCTTCAT	NA	False	NA	-4	True	NA	NA	NA	157870354	157823718	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_157824381_157834887_157834976_157835273_157835479_157837300_157837442_157838996_157839146_157842539_157842729_157848938_157851279_157870293
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102174	chr2	+	3647	7	FSM	ENSMUSG00000027651.17	ENSMUST00000029180.14	4283	7	-251	887	-27	-887	multi-exon	FALSE	canonical	3	131	junction_3	20.3749573960018	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGATGTTTCTTCTCC	NA	False	NA	10	True	AATAAA	-21	NA	157870389	157919240	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_157870966_157877915_157878046_157885325_157885460_157889835_157889949_157892006_157892134_157900571_157900748_157916849
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102175	chr2	+	3644	7	FSM	ENSMUSG00000027651.17	ENSMUST00000103123.10	4504	7	-27	887	-27	-887	multi-exon	FALSE	canonical	3	106	junction_3	28.7807806241133	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGATGTTTCTTCTCC	NA	False	NA	10	True	AATAAA	-21	NA	157870389	157919240	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_157870966_157877915_157878046_157885325_157885460_157889838_157889949_157892006_157892134_157900571_157900748_157916849
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102195	chr2	-	3595	13	FSM	ENSMUSG00000037820.16	ENSMUST00000103122.10	3596	13	1	0	1	0	multi-exon	FALSE	canonical	3	151	junction_8	19.1534374634598	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTCTGCCTTGTCCTTT	8807	False	NA	NA	False	AATAAA	-22	NA	157988355	157958321	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_157959872_157960766_157960904_157962044_157962206_157966040_157966311_157969031_157969275_157970558_157970663_157971242_157971379_157973250_157973429_157974348_157974478_157976170_157976290_157980626_157980870_157984914_157985095_157988210
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102202	chr2	-	203	1	Intergenic	novelGene_3151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGATGTTTGTTTGTCT	NA	False	NA	NA	False	TTTAAA	-3	NA	158008333	158008130	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_158008100_158008300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102210	chr2	+	216	1	Intergenic	novelGene_3152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTATTTAATGTATGT	NA	False	NA	NA	False	TTTAAA	-6	NA	158135734	158135950	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_158135700_158136000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102219	chr2	+	184	1	ISM	ENSMUSG00000044349.17	ENSMUST00000137320.2	3156	2	1419	1745	1372	111	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGATGGCTGCCCTCAA	NA	False	NA	NA	False	NA	NA	NA	158219053	158219237	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_+_158219100_158219200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102239	chr2	+	2379	9	FSM	ENSMUSG00000037761.17	ENSMUST00000045644.9	2402	9	18	5	18	-5	multi-exon	TRUE	canonical	0	0	junction_4	35.8634563309227	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTATTCTGTGTGTGCC	NA	False	NA	NA	False	TTTAAA	-21	NA	158466825	158481126	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_158467437_158468246_158468477_158469976_158470147_158473382_158473601_158474191_158474375_158477226_158477347_158477927_158478068_158478587_158478721_158480552
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102257	chr2	+	2270	4	FSM	ENSMUSG00000027654.3	ENSMUST00000029183.3	2266	4	-4	0	-4	0	multi-exon	FALSE	canonical	3	282	junction_3	16.3571255285137	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGATTCTTTTTGTT	402	False	NA	8	True	AATAAA	-16	NA	158610008	158628557	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_158610508_158621764_158621933_158625052_158625178_158627079
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102261	chr2	+	2480	4	NNC	ENSMUSG00000027654.3	novel	2266	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	130.561181911862	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGATTCTTTTTGTT	406	False	NA	8	True	AATAAA	-16	NA	158610012	158628557	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_158610508_158621764_158622147_158625052_158625178_158627079
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102278	chr2	+	258	1	Intergenic	novelGene_3153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCACACTTGTGTGTCTT	NA	False	NA	NA	False	AAAACA	-6	NA	160306657	160306915	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_160306700_160306900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102301	chr2	+	204	1	Intergenic	novelGene_3154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTTCATAAAAATCGCAT	NA	False	NA	NA	False	ATTAAA	-11	NA	160509055	160509259	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_160509100_160509300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102309	chr2	-	185	1	Intergenic	novelGene_3155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAAGAGCCAGA	NA	False	NA	NA	False	NA	NA	NA	160516767	160516582	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_160516600_160516800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102314	chr2	+	5221	33	NIC	ENSMUSG00000016933.18	novel	4388	33	NA	NA	-44	10	combination_of_known_junctions	FALSE	canonical	3	165	junction_14	23.8978947817585	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTGTTTCTTGGGGGC	NA	False	NA	26	True	AATAAA	-27	NA	160573175	160605216	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102325	chr2	+	5156	32	FSM	ENSMUSG00000016933.18	ENSMUST00000109462.8	5107	32	-39	-10	-5	10	multi-exon	FALSE	canonical	3	165	junction_13	22.7747418375012	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTGTTTCTTGGGGGC	NA	False	NA	26	True	AATAAA	-27	NA	160573613	160605216	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102344	chr2	+	3567	6	FSM	ENSMUSG00000016921.15	ENSMUST00000130411.7	3527	6	-40	0	-40	0	multi-exon	FALSE	canonical	3	865	junction_2	49.2097551304617	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTTCTTCATTTATTG	NA	False	NA	17	True	AATAAA	-18	NA	162773407	162779041	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_162773698_162773913_162774063_162775345_162775471_162775573_162775783_162776147_162776232_162776331
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102353	chr2	+	2022	7	FSM	ENSMUSG00000016921.15	ENSMUST00000017065.15	1666	7	-34	-322	0	140	multi-exon	FALSE	canonical	3	50	junction_2	407.538443994347	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTATTTTGTGCTGTTAAT	NA	False	NA	5	True	AATAAA	-18	NA	162773447	162777268	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_162773698_162773913_162774063_162774734_162775003_162775345_162775471_162775573_162775783_162776147_162776232_162776331
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102360	chr2	+	2151	13	FSM	ENSMUSG00000017858.13	ENSMUST00000018002.13	2248	13	97	0	-40	0	multi-exon	FALSE	canonical	3	222	junction_1	53.5787971122906	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTGTCATTGATATCCT	NA	False	NA	19	True	ATTAAA	-31	NA	162859370	162888061	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_162859454_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102373	chr2	+	2212	13	NIC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	-11	-5	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	92.6614207148201	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGGTCTGTCATTGAT	NA	False	NA	14	True	ATTAAA	-26	NA	162859427	162888056	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_162859577_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102378	chr2	+	3806	14	FSM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	-150	-5	-150	5	multi-exon	FALSE	canonical	3	2736	junction_8	179.963737307165	2416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTCCTCCTTTTTCTGCT	NA	False	NA	31	True	NA	NA	NA	162896456	162926613	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102420	chr2	+	5006	12	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-71	975	intron_retention	FALSE	canonical	3	2774	junction_1	169.054590429999	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162896535	162925594	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102424	chr2	+	2697	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-70	975	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_3	820.256858312972	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162896536	162925594	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904386_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102432	chr2	+	2665	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-65	983	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_1	809.068256568618	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCCTCTGAGTCCTGA	NA	False	NA	NA	False	AATAAA	-27	NA	162896541	162925602	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_162896724_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102438	chr2	+	2704	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-65	975	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	834.123321803396	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162896541	162925594	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916727_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102468	chr2	+	2413	11	ISM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	7674	1006	3012	983	3prime_fragment	FALSE	canonical	3	2736	junction_5	164.584932481683	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCCTCTGAGTCCTGA	NA	False	NA	NA	False	AATAAA	-27	NA	162904280	162925602	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_+_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102483	chr2	-	767	2	Genic_Genomic	ENSMUSG00000070708.6	novel	822	1	NA	NA	-1759	3	multi-exon	FALSE	canonical	3	735	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGCTGTGCTGGTTGTTTT	910	False	NA	0	True	AATAAA	-20	NA	162931534	162928950	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr2_-_162929642_162931458
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102488	chr2	-	893	2	Genic_Genomic	ENSMUSG00000070708.6	novel	822	1	NA	NA	-1759	3	multi-exon	FALSE	canonical	3	698	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGCTGTGCTGGTTGTTTT	910	False	NA	0	True	AATAAA	-20	NA	162931534	162928950	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr2_-_162929768_162931458
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102498	chr2	-	2578	1	FSM	ENSMUSG00000070708.6	ENSMUST00000094653.6	822	1	-1758	2	-1758	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTCCGGGCTGTGCTGGTT	911	False	NA	-5	True	AATAAA	-15	NA	162931533	162928955	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_162929000_162931500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102528	chr2	-	184	1	Intergenic	novelGene_3156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTGGCATTATATCTA	NA	False	NA	-3	True	NA	NA	NA	163358959	163358775	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_163358800_163359000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102535	chr2	+	4501	5	FSM	ENSMUSG00000017679.17	ENSMUST00000109408.10	1999	5	8	-2510	8	-2	multi-exon	FALSE	canonical	3	17	junction_1	3.8405728739343	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGCATTGTGGTTTTTA	5707	False	NA	NA	False	AATAAA	-15	NA	163444249	163460930	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_163444335_163449131_163449595_163453678_163453873_163455654_163455766_163457282
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102549	chr2	+	183	1	Intergenic	novelGene_3157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGGCTGCTCTCACAAA	NA	False	NA	NA	False	NA	NA	NA	163490297	163490480	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_163490300_163490500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102566	chr2	+	160	1	Intergenic	novelGene_3158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGAGAGAAGAGGTTT	NA	False	NA	NA	False	NA	NA	NA	163501789	163501949	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_163501800_163501900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102569	chr2	-	1450	12	FSM	ENSMUSG00000017697.4	ENSMUST00000017841.4	1688	12	15	223	15	-223	multi-exon	FALSE	canonical	3	45	junction_1	12.1526108476007	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATGGTGAATATGGTCT	NA	False	NA	1	True	AATAAA	-25	NA	163592144	163568726	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_163568969_163569463_163569564_163570036_163570167_163571931_163571997_163572217_163572320_163572400_163572473_163573024_163573153_163574176_163574293_163574773_163574918_163577268_163577392_163580082_163580145_163591978
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102577	chr2	+	2843	6	FSM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	173	-3	173	3	multi-exon	FALSE	canonical	3	1292	junction_3	139.446620611616	648	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGGATTGATGTGTCA	NA	False	NA	24	True	AATAAA	-19	NA	163837052	163860511	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_163837286_163853521_163853825_163855925_163856050_163857150_163857315_163858022_163858119_163858588
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102593	chr2	-	1921	7	FSM	ENSMUSG00000018322.11	ENSMUST00000109384.10	1923	7	4	-2	4	2	multi-exon	FALSE	canonical	3	532	junction_3	35.0606617165164	232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCTCTGACGCATTTGT	5885	False	NA	-3	True	ATTAAA	-18	NA	163913085	163895457	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_163896428_163896620_163896748_163900585_163900734_163902758_163902929_163906811_163906965_163908489_163908590_163912832
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102601	chr2	+	5262	11	FSM	ENSMUSG00000018209.16	ENSMUST00000018353.14	5232	11	-30	0	-30	0	multi-exon	FALSE	canonical	3	214	junction_9	12.953763931769	234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTCCCCTTTCTTCACA	NA	False	NA	18	True	AATAAA	-18	NA	163916027	163997444	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_163916168_163921432_163921514_163925549_163925679_163928414_163928530_163930760_163930926_163938658_163938827_163940358_163940497_163941616_163941746_163942329_163942517_163959888_163960047_163993592
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102612	chr2	+	176	1	Intergenic	novelGene_3159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTGTCTGAAGACAGCTA	NA	False	NA	NA	False	NA	NA	NA	163964688	163964864	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_163964700_163964900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102619	chr2	-	2458	5	FSM	ENSMUSG00000017009.4	ENSMUST00000017153.4	2458	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	6.36396103067893	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCAGTTTTATTTTTG	NA	False	NA	47	True	AATAAA	-24	NA	164285106	164266166	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_164268158_164270812_164271009_164271599_164271647_164273106_164273234_164285009
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102637	chr2	+	144	1	Intergenic	novelGene_3160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCCATATGGTAGTCT	NA	False	NA	NA	False	NA	NA	NA	164361545	164361689	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_164361500_164361700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102656	chr2	+	1276	13	FSM	ENSMUSG00000017299.14	ENSMUST00000017443.14	1664	13	5	383	5	-383	multi-exon	FALSE	canonical	3	563	junction_10	65.6144039064594	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGTGAGCCTGCTATAAT	NA	False	NA	19	True	AATAAA	-5	NA	164587907	164610144	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599980_164601171_164601218_164604988_164605048_164605140_164605202_164607080_164607153_164609626_164609683_164609782
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102663	chr2	+	1121	8	ISM	ENSMUSG00000017299.14	ENSMUST00000109327.4	656	9	-27	1792	-10	209	5prime_fragment	FALSE	canonical	3	592	junction_6	60.090408076973	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATAGTATTGTCCTTCTG	NA	False	NA	NA	False	NA	NA	NA	164587923	164601688	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599980_164601171
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102671	chr2	+	198	1	Intergenic	novelGene_3161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTATTTATTATATGTAA	NA	False	NA	NA	False	NA	NA	NA	164610736	164610934	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_164610700_164610900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102679	chr2	+	984	6	FSM	ENSMUSG00000001403.14	ENSMUST00000088248.13	967	6	-17	0	-17	0	multi-exon	FALSE	canonical	3	1606	junction_1	43.6458474542539	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTCTCAAGTTACCCT	NA	False	NA	NA	False	AATAAA	-25	NA	164611800	164614827	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_164612001_164612286_164612315_164613212_164613300_164613773_164613979_164614086_164614147_164614423
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102689	chr2	-	964	5	FSM	ENSMUSG00000017307.17	ENSMUST00000134611.4	1017	5	50	3	-9	0	multi-exon	FALSE	canonical	3	55	junction_4	121.847240428333	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCTGACCTTTAATAGAA	8217	False	NA	-1	True	AATAAA	-19	NA	164646751	164634687	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_164634931_164636904_164637100_164637571_164637730_164641639_164641866_164646609
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102693	chr2	-	1159	6	FSM	ENSMUSG00000017307.17	ENSMUST00000103094.11	1152	6	-7	0	-7	0	multi-exon	TRUE	canonical	3	284	junction_4	26.9250812440743	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCTGACCTTTAATAGAA	8159	False	NA	-1	True	AATAAA	-19	NA	164646809	164634687	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_164634931_164636904_164637100_164637571_164637730_164641639_164641866_164644916_164645054_164646609
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102703	chr2	+	226	1	Intergenic	novelGene_3162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAGGTCAGAGACAACC	NA	False	NA	NA	False	NA	NA	NA	164639277	164639503	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_164639300_164639500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102715	chr2	+	2708	2	FSM	ENSMUSG00000045822.5	ENSMUST00000052107.5	2708	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGTGTTTTTTGAGACG	3063	False	NA	22	True	AATAAA	-22	NA	164647017	164664050	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_164647352_164661676
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102729	chr2	+	2382	2	FSM	ENSMUSG00000017764.3	ENSMUST00000017908.3	2705	2	323	0	-4	0	multi-exon	FALSE	canonical	3	571	junction_1	0	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTGTCTTGTCTGGTTTA	8850	False	NA	16	True	AATAAA	-19	NA	164664928	164668791	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_164665121_164666601
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102746	chr2	+	1909	14	NIC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	-1	-435	intron_retention	FALSE	canonical	3	800	junction_1	81.5756809102831	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTCTTCTCTGTGGCA	NA	False	NA	18	True	ATTAAA	-18	NA	164675725	164681504	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_164675771_164675949_164676129_164676239_164676352_164676617_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102753	chr2	+	1958	14	ISM	ENSMUSG00000017760.17	ENSMUST00000103093.10	2534	15	974	435	0	-435	3prime_fragment	FALSE	canonical	3	937	junction_10	54.6384566651142	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTCTTCTCTGTGGCA	NA	False	NA	18	True	ATTAAA	-18	NA	164675766	164681504	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_+_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102762	chr2	+	2067	13	NIC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	2	-435	intron_retention	FALSE	canonical	3	937	junction_9	56.2506790082474	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTCTTCTCTGTGGCA	NA	False	NA	18	True	ATTAAA	-18	NA	164675768	164681504	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102773	chr2	+	202	1	Intergenic	novelGene_3163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTGGGAGGGGCTACTT	NA	False	NA	NA	False	NA	NA	NA	164677971	164678173	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_164678000_164678200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102775	chr2	-	1819	16	FSM	ENSMUSG00000017754.14	ENSMUST00000059954.14	1809	16	-10	0	-10	0	multi-exon	FALSE	canonical	3	278	junction_15	32.6696597268271	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTTTCTCTAGCTCTG	NA	False	NA	-1	True	NA	NA	NA	164699641	164681437	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806_164698918_164699503
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102796	chr2	+	197	1	Intergenic	novelGene_3164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAACCAAAAACCAGAACT	4376	False	NA	NA	False	NA	NA	NA	164719703	164719900	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_164719700_164719900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102811	chr2	+	5769	17	FSM	ENSMUSG00000039849.7	ENSMUST00000041643.5	5780	17	11	0	11	0	multi-exon	FALSE	canonical	3	171	junction_4	60.7051017213545	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGGCCACAGACATGAA	5960	False	NA	9	True	AATAAA	-16	NA	164721287	164736374	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_164721410_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518_164732695_164732796
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102815	chr2	+	509	2	FSM	ENSMUSG00000039849.7	ENSMUST00000145327.2	611	2	66	36	13	-36	multi-exon	FALSE	canonical	3	441	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATGATGTCGTTAACAAC	5962	False	NA	8	True	AATAAA	-18	NA	164721289	164725083	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_164721410_164724694
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102829	chr2	-	4425	28	FSM	ENSMUSG00000039834.18	ENSMUST00000041361.14	4587	28	159	3	159	-3	multi-exon	TRUE	canonical	3	65	junction_13	19.1818958999235	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTCTCTTTGTATATGTG	NA	False	NA	-3	True	AATAAA	-22	NA	164753518	164733804	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102857	chr2	+	185	1	Intergenic	novelGene_3165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGCCAGGTATGGCAGC	50	False	NA	NA	False	NA	NA	NA	164857836	164858021	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_164857800_164858000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102875	chr2	-	1944	10	NIC	ENSMUSG00000017664.17	novel	1843	11	NA	NA	16	0	intron_retention	TRUE	canonical	3	63	junction_9	61.9452167365908	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTCTGGAGACTACCA	5721	False	NA	-34	True	AATAAA	-18	NA	165129728	165118473	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125521_165129703
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102914	chr2	-	1899	2	FSM	ENSMUSG00000039725.7	ENSMUST00000039007.7	1880	2	-19	0	-19	0	multi-exon	FALSE	canonical	3	240	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCGGAGACCTGGAACA	NA	False	NA	-17	True	NA	NA	NA	165335263	165332029	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_165333632_165334966
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102926	chr2	+	184	1	Intergenic	novelGene_3166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTATGGAGACTTCTAGA	NA	False	NA	NA	False	NA	NA	NA	165546167	165546351	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_165546200_165546400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102946	chr2	-	3252	9	ISM	ENSMUSG00000039671.19	ENSMUST00000109269.8	6188	24	70158	-1155	43843	1	3prime_fragment	FALSE	canonical	3	58	junction_8	38.060601348376	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCGTTTCTTCATGGC	NA	False	NA	-2	True	ATTAAA	-19	NA	165650199	165626073	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102949	chr2	-	4205	20	NIC	ENSMUSG00000039671.19	novel	5093	23	NA	NA	33	1	combination_of_known_splicesites	FALSE	canonical	3	102	junction_8	165.186623243575	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCGTTTCTTCATGGC	NA	False	NA	-2	True	ATTAAA	-19	NA	165740903	165626073	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165740835
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102954	chr2	-	3096	9	ISM	ENSMUSG00000039671.19	ENSMUST00000109266.11	5072	22	49894	2	43843	1	3prime_fragment	FALSE	canonical	3	102	junction_8	24.3871764458291	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCGTTTCTTCATGGC	NA	False	NA	-2	True	ATTAAA	-19	NA	165650199	165626073	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102974	chr2	+	179	1	Intergenic	novelGene_3167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAAGGCTGACCTCT	2851	False	NA	NA	False	NA	NA	NA	165732941	165733120	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_165732900_165733100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102980	chr2	+	195	1	Intergenic	novelGene_3168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAATTTGCTATGGGA	3995	False	NA	NA	False	NA	NA	NA	165734085	165734280	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_165734100_165734300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102983	chr2	+	193	1	Intergenic	novelGene_3169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGCCAGAGCTGGGCGT	5379	False	NA	NA	False	NA	NA	NA	165735469	165735662	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_165735500_165735700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102991	chr2	+	197	1	Intergenic	novelGene_3170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAAAAGGTCTCCTCT	NA	False	NA	NA	False	NA	NA	NA	165751162	165751359	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_165751200_165751400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000102995	chr2	+	203	1	Intergenic	novelGene_3171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATTTGGAAAACAAATTGT	NA	False	NA	NA	False	AAAACA	-5	NA	165760989	165761192	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_165761000_165761200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103000	chr2	+	175	1	Intergenic	novelGene_3172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAGGAGAGAGGGC	NA	False	NA	NA	False	NA	NA	NA	165790966	165791141	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_165791000_165791100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103010	chr2	+	5777	23	FSM	ENSMUSG00000027678.18	ENSMUST00000109252.8	5757	23	-22	2	-22	-2	multi-exon	FALSE	canonical	3	143	junction_19	38.1274504699546	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGCCCACTCATCATTT	NA	False	NA	14	True	ATTAAA	-20	NA	165834533	165913388	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103011	chr2	+	5780	23	FSM	ENSMUSG00000027678.18	ENSMUST00000088095.6	7531	23	-23	1774	-22	-2	multi-exon	FALSE	canonical	3	140	junction_19	38.5042929880864	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGCCCACTCATCATTT	NA	False	NA	14	True	ATTAAA	-20	NA	165834533	165913388	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103029	chr2	+	990	3	ISM	ENSMUSG00000027678.18	ENSMUST00000139394.2	822	5	1594	-423	1594	423	3prime_fragment	FALSE	canonical	3	310	junction_1	11	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTACCCTGTAATTCTCA	NA	False	NA	NA	False	NA	NA	NA	165910943	165912543	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_+_165911300_165911730_165911873_165912051
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103041	chr2	-	3802	21	FSM	ENSMUSG00000006800.15	ENSMUST00000109249.9	4580	21	-44	822	-44	3	multi-exon	FALSE	canonical	0	0	junction_20	203.951336107416	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGGACTTTTTTGCTCT	NA	False	NA	-7	True	NA	NA	NA	165997627	165915830	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165997422
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103078	chr2	-	192	1	Intergenic	novelGene_3173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAATGAAAAAGAGAAAGAG	NA	False	NA	NA	False	AATAAA	-7	NA	166199201	166199009	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_166199000_166199200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103090	chr2	+	192	1	Intergenic	novelGene_3174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGGAACAGGAATGGTG	9188	False	NA	NA	False	NA	NA	NA	166456747	166456939	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_166456700_166456900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103094	chr2	-	218	1	Intergenic	novelGene_3175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGACGAGGGAGAGGAGGG	NA	False	NA	0	True	NA	NA	NA	166591200	166590982	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_166591000_166591200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103105	chr2	+	8843	39	FSM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	-73	0	-73	0	multi-exon	TRUE	canonical	3	156	junction_4	19.7687636593819	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTCCCAGTGTCATCAT	NA	False	NA	NA	False	AATAAA	-16	NA	166647434	166739972	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103120	chr2	+	220	1	Intergenic	novelGene_3176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTATGTTATTTTTCT	NA	False	NA	NA	False	NA	NA	NA	166689311	166689531	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_166689300_166689500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103125	chr2	+	3668	25	FSM	ENSMUSG00000002718.15	ENSMUST00000002790.14	3641	25	-27	0	-8	0	multi-exon	FALSE	canonical	3	726	junction_12	67.9214722226255	635	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTTTTTATTGTTTTC	NA	False	NA	37	True	CATAAA	-33	NA	166747951	166788309	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103144	chr2	-	2954	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109235.8	3569	12	23	592	10	6	multi-exon	FALSE	canonical	3	104	junction_8	51.6000192196774	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTTCCAATTGAGCAG	NA	False	NA	-15	True	AATAAA	-15	NA	166838175	166790060	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103156	chr2	+	215	1	Intergenic	novelGene_3177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAGCAAGGTAGA	2166	False	NA	NA	False	NA	NA	NA	166829236	166829451	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_166829200_166829500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103164	chr2	-	178	1	Intergenic	novelGene_3178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATTAGATAGATAG	NA	False	NA	NA	False	NA	NA	NA	166853941	166853763	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_166853800_166853900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103173	chr2	+	2673	21	FSM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	44	-3	44	3	multi-exon	FALSE	canonical	3	666	junction_12	71.8993045863449	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTGTCTGTGAATCTG	NA	False	NA	NA	False	NA	NA	NA	166857156	166876870	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166869931_166870197_166870352_166871199_166871282_166871404_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166875955_166876044_166876392_166876465_166876558
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103181	chr2	+	2181	8	FSM	ENSMUSG00000017999.17	ENSMUST00000150571.2	2151	8	-30	0	-30	0	multi-exon	FALSE	canonical	3	722	junction_7	28.1497453499193	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATAGTATTATTTCCCAT	NA	False	NA	NA	False	NA	NA	NA	166857199	166867733	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103197	chr2	+	451	5	FSM	ENSMUSG00000074578.15	ENSMUST00000189909.7	738	5	287	0	0	0	multi-exon	FALSE	canonical	3	874	junction_1	47.5105251496971	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGTCTTGAGTTTC	NA	False	NA	35	True	AATAAA	-45	NA	166905140	166907782	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_166905218_166905555_166905648_166907078_166907138_166907353_166907401_166907606
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103211	chr2	+	209	1	Intergenic	novelGene_3179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	269	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGACTTTGGACAAGTGA	NA	False	NA	NA	False	NA	NA	NA	167037766	167037975	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_167037800_167038000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103222	chr2	+	178	1	Intergenic	novelGene_3180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGTGTGGTGGCGCACG	NA	False	NA	NA	False	NA	NA	NA	167101287	167101465	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_167101300_167101500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103230	chr2	-	4250	9	FSM	ENSMUSG00000017929.14	ENSMUST00000109221.9	4210	9	-40	0	-40	0	multi-exon	FALSE	canonical	3	218	junction_3	15.1244834622542	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTAGTCGTCTCTCTG	NA	False	NA	-1	True	AGTAAA	-23	NA	167191143	167140363	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_167143404_167143929_167144032_167146915_167147039_167147579_167147768_167148510_167148628_167149463_167149589_167151142_167151257_167155006_167155142_167190837
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103238	chr2	+	194	1	Intergenic	novelGene_3181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGCAAGTACTCTTACC	NA	False	NA	NA	False	NA	NA	NA	167207281	167207475	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_167207300_167207500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103248	chr2	+	235	1	Intergenic	novelGene_3182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAACACTGCTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	167297623	167297858	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_167297600_167297900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103263	chr2	-	3737	3	FSM	ENSMUSG00000047030.16	ENSMUST00000057627.16	4012	3	9	266	0	34	multi-exon	FALSE	canonical	3	52	junction_2	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGTTCATGGTGTTAC	4591	False	NA	NA	False	AATAAA	-19	NA	167334798	167323318	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_167326500_167327077_167327514_167334678
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103272	chr2	+	2171	6	FSM	ENSMUSG00000006418.18	ENSMUST00000078050.7	2502	6	331	0	-26	0	multi-exon	FALSE	canonical	3	578	junction_2	31.1088411870323	301	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCAATGTTTTCATTTAA	NA	False	NA	24	True	AATAAA	-25	NA	167345339	167358093	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_167345522_167348966_167349118_167352795_167352903_167353131_167353247_167354436_167354545_167356585
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103289	chr2	-	1773	4	FSM	ENSMUSG00000078923.11	ENSMUST00000109207.10	2041	4	63	205	-45	1	multi-exon	FALSE	canonical	3	2167	junction_3	78.0555357848927	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGTGGTTTTATTTTAAG	9381	False	NA	NA	False	AATAAA	-23	NA	167473952	167449762	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_167451168_167452223_167452350_167459748_167459898_167473859
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103295	chr2	-	1844	5	FSM	ENSMUSG00000078923.11	ENSMUST00000151365.8	924	5	2	-922	2	0	multi-exon	FALSE	canonical	3	48	junction_4	1117.10764924424	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGGTGGTTTTATTTTAA	9428	False	NA	NA	False	AATAAA	-22	NA	167473905	167449763	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_167451168_167452223_167452350_167459748_167459898_167471089_167471209_167473859
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103324	chr2	+	1686	1	FSM	ENSMUSG00000056501.4	ENSMUST00000070642.4	1504	1	-182	0	-182	0	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGGGCAGTAGTTGGC	NA	False	NA	32	True	AATAAA	-26	NA	167530652	167532338	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_167530700_167532300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103342	chr2	-	189	1	Intergenic	novelGene_3183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGACTTGTGGCTTGG	NA	False	NA	5	True	NA	NA	NA	167879865	167879676	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_167879700_167879900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103351	chr2	+	3438	3	FSM	ENSMUSG00000044641.8	ENSMUST00000052125.7	3399	3	-39	0	-39	0	multi-exon	FALSE	canonical	3	144	junction_1	5.5	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTTGTTTGAAATTACA	NA	False	NA	NA	False	AATAAA	-22	NA	167922884	167943123	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_167923280_167929261_167929485_167940303
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103360	chr2	+	196	1	Intergenic	novelGene_3184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	167981857	167982053	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_167981900_167982100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103367	chr2	+	205	1	Intergenic	novelGene_3185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAAATGCCATAACACACA	NA	False	NA	NA	False	NA	NA	NA	167999070	167999275	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_167999100_167999300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103376	chr2	-	5115	4	FSM	ENSMUSG00000051149.16	ENSMUST00000088001.6	4932	4	-183	0	-183	0	multi-exon	FALSE	canonical	3	112	junction_3	29.1699998095456	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGCTTTTATTACACAC	2734	False	NA	-1	True	AATAAA	-25	NA	168049215	168022905	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_168027093_168029486_168029580_168031201_168031315_168048493
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103384	chr2	-	5125	5	FSM	ENSMUSG00000051149.16	ENSMUST00000057793.11	4917	5	-208	0	-18	0	multi-exon	FALSE	canonical	3	20	junction_3	74.0249113474647	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGCTTTTATTACACAC	2899	False	NA	-1	True	AATAAA	-25	NA	168049050	168022905	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_168027093_168029486_168029580_168031201_168031315_168046519_168046695_168048493
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103397	chr2	-	1052	9	FSM	ENSMUSG00000078919.11	ENSMUST00000154111.8	2293	9	8	1233	8	0	multi-exon	FALSE	canonical	3	450	junction_3	8.66656650583148	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTGCTTTCATTTAGA	NA	False	NA	-19	True	AATAAA	-23	NA	168072291	168052200	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103407	chr2	+	1983	1	FSM	ENSMUSG00000074576.5	ENSMUST00000099071.5	1973	1	-10	0	-10	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAGTCTTAATTCTACT	NA	False	NA	NA	False	AAAAAG	-2	NA	168072531	168074514	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_168072500_168074500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103415	chr2	-	282	1	Intergenic	novelGene_3186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1355	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGACAGGGTTTCTCT	NA	False	NA	NA	False	AATAAA	-38	NA	168153072	168152790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_168152800_168153100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103425	chr2	-	182	1	Intergenic	novelGene_3187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACACACACAAACCAATATT	6201	False	NA	NA	False	NA	NA	NA	168224925	168224743	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_168224700_168224900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103430	chr2	+	181	1	Intergenic	novelGene_3188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTTTTAAAGGGCTG	NA	False	NA	NA	False	NA	NA	NA	168474382	168474563	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_168474400_168474600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103450	chr2	-	3692	28	FSM	ENSMUSG00000027546.16	ENSMUST00000109175.9	3729	28	37	0	37	0	multi-exon	TRUE	canonical	3	71	junction_27	47.3339708993171	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGCAGGCTTTTCATTTT	NA	False	NA	-23	True	GATAAA	-16	NA	168576222	168476357	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168575940
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103455	chr2	-	3780	28	FSM	ENSMUSG00000027546.16	ENSMUST00000109176.8	3691	28	-89	0	82	0	multi-exon	FALSE	canonical	3	157	junction_27	35.3190436202576	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGCAGGCTTTTCATTTT	6372	False	NA	-23	True	GATAAA	-16	NA	168583971	168476357	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168583601
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103466	chr2	+	198	1	Intergenic	novelGene_3189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTTAAAAAAGTTAAAGTC	2462	False	NA	NA	False	NA	NA	NA	168551515	168551713	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_168551500_168551700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103480	chr2	-	5117	4	NIC	ENSMUSG00000027547.18	novel	5073	4	NA	NA	-181	0	intron_retention	FALSE	canonical	3	69	junction_3	260.140133176119	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGGCTTGTGTGTATGCT	NA	False	NA	-17	True	AATAAA	-22	NA	168607347	168590251	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_168592381_168594373_168594661_168596353_168598721_168607013
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103506	chr2	+	187	1	Intergenic	novelGene_3190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACAACAAGCCGGGCGTG	NA	False	NA	NA	False	NA	NA	NA	168633584	168633771	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_168633600_168633800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103511	chr2	-	176	1	Intergenic	novelGene_3191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGGAAGGCAGGGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	168652729	168652553	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_168652600_168652700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103521	chr2	+	190	1	Intergenic	novelGene_3192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAAGTGGGTAACTACTC	NA	False	NA	NA	False	NA	NA	NA	168664721	168664911	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_168664700_168664900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103523	chr2	+	197	1	Intergenic	novelGene_3193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTGCTGAGAGCCGGGG	5483	False	NA	NA	False	NA	NA	NA	168676000	168676197	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_168676000_168676200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103531	chr2	+	253	1	Intergenic	novelGene_3194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCTGGGTCAGTTCCTA	6047	False	NA	NA	False	NA	NA	NA	168676564	168676817	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_168676600_168676800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103539	chr2	-	222	1	Intergenic	novelGene_3195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGAGCATTTTGACCATA	2506	False	NA	NA	False	NA	NA	NA	168720042	168719820	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_168719800_168720000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103550	chr2	-	2756	6	FSM	ENSMUSG00000027551.16	ENSMUST00000087971.11	2438	6	-318	0	-3	0	multi-exon	FALSE	canonical	3	382	junction_1	95.1075181045116	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTGTATTGTATAGTTT	NA	False	NA	0	True	AATAAA	-29	NA	168797510	168767280	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_168768854_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103559	chr2	-	999	6	FSM	ENSMUSG00000027551.16	ENSMUST00000109161.3	1009	6	10	0	-7	0	multi-exon	FALSE	canonical	3	129	junction_1	185.215982031789	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTACTGTTGTTACCATT	NA	False	NA	-1	True	TATAAA	-19	NA	168797199	168776732	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_168776860_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103564	chr2	+	203	1	Intergenic	novelGene_3196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGGCTGTCAGGATGGC	4701	False	NA	NA	False	NA	NA	NA	168783333	168783536	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_168783300_168783500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103569	chr2	+	214	1	Antisense	novelGene_ENSMUSG00000027551.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGCTTAAACATGTGAC	NA	False	NA	NA	False	AATGAA	-12	NA	168792879	168793093	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr2_+_168792900_168793100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103583	chr2	+	180	1	Intergenic	novelGene_3197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAATTTCAATACT	8897	False	NA	NA	False	NA	NA	NA	169924020	169924200	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_169924000_169924200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103587	chr2	-	221	1	Intergenic	novelGene_3198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAAAACAAGTTTACA	NA	False	NA	NA	False	NA	NA	NA	169944401	169944180	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_169944200_169944400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103604	chr2	+	189	1	Intergenic	novelGene_3199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGAGCCAATCCCAAGC	2107	False	NA	NA	False	NA	NA	NA	170135776	170135965	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_170135800_170136000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103611	chr2	-	219	1	Intergenic	novelGene_3200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTCAGTTCTCTGATCT	7820	False	NA	NA	False	AAAAAG	-21	NA	170143873	170143654	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_170143700_170143900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103616	chr2	-	1328	3	FSM	ENSMUSG00000013523.14	ENSMUST00000152461.2	371	3	-14	-943	-14	-2	multi-exon	FALSE	canonical	3	30	junction_2	23.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGAGGTGGTTTTTTTT	4132	False	NA	-1	True	AATAAA	-20	NA	170191729	170189065	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_170190069_170191101_170191384_170191686
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103618	chr2	-	1604	2	ISM	ENSMUSG00000013523.14	ENSMUST00000156657.8	594	3	-42	-785	13	-2	intron_retention	FALSE	canonical	3	77	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGAGGTGGTTTTTTTT	4159	False	NA	-1	True	AATAAA	-20	NA	170191702	170189065	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_-_170190069_170191101
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103628	chr2	+	682	4	FSM	ENSMUSG00000052033.14	ENSMUST00000063682.12	935	4	198	55	-12	1	multi-exon	FALSE	canonical	3	676	junction_1	80.8469060769936	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTCTATATTATTATT	4040	False	NA	13	True	ATTAAA	-16	NA	170353352	170360988	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_170353390_170357658_170357767_170358469_170358611_170360592
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103641	chr2	+	171	1	Intergenic	novelGene_3201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAGAAACCAACA	NA	False	NA	NA	False	NA	NA	NA	170836283	170836454	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_170836300_170836500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103657	chr2	-	1862	9	FSM	ENSMUSG00000027496.16	ENSMUST00000109140.10	1862	9	0	0	0	0	multi-exon	FALSE	canonical	3	1025	junction_8	140.198965759381	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGTGGGTAATCATTTGA	NA	False	NA	-2	True	AATATA	-22	NA	172212455	172198109	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212392
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103672	chr2	-	1920	9	FSM	ENSMUSG00000027496.16	ENSMUST00000109139.8	1905	9	-15	0	0	0	multi-exon	FALSE	canonical	3	87	junction_8	405.788969169937	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGAGTACGTGGGTAATC	NA	False	NA	-8	True	AATATA	-16	NA	172212441	172198115	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212314
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103683	chr2	+	3341	6	NIC	ENSMUSG00000027498.15	novel	3451	6	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	3	132	junction_1	102.721760109531	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGTGACGTAAAGGTAGTT	NA	False	NA	12	True	AATAAA	-19	NA	172212591	172224367	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_172212777_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172222279
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103713	chr2	+	187	1	Intergenic	novelGene_3202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTGGGCTGGCAAGATG	NA	False	NA	NA	False	NA	NA	NA	172230391	172230578	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_172230400_172230600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103719	chr2	+	2159	9	FSM	ENSMUSG00000027502.12	ENSMUST00000029005.4	2173	9	14	0	14	0	multi-exon	FALSE	canonical	3	407	junction_4	19.7416912902618	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGGGTTGGTTTTGCTT	NA	False	NA	16	True	AATAAA	-16	NA	172282489	172311828	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_172282660_172286566_172286662_172287246_172287341_172288541_172288682_172288954_172289034_172305096_172305211_172308193_172308252_172308348_172308445_172310515
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103730	chr2	+	2858	7	FSM	ENSMUSG00000028640.12	ENSMUST00000030391.9	2838	7	-20	0	-20	0	multi-exon	FALSE	canonical	3	551	junction_1	51.676611946046	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTCTGACCCTTTTT	NA	False	NA	25	True	AATAAA	-27	NA	172391492	172400542	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_172391803_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103738	chr2	+	2719	7	NNC	ENSMUSG00000028640.12	novel	2838	7	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_6	217.157904658236	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTCTGGTTCTGACCC	NA	False	NA	20	True	AATAAA	-22	NA	172391512	172400537	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_172391803_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399124
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103749	chr2	+	2779	7	FSM	ENSMUSG00000028640.12	ENSMUST00000170744.2	2776	7	0	-3	0	0	multi-exon	FALSE	canonical	3	62	junction_1	218.277091992927	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTCTGACCCTTTTT	NA	False	NA	25	True	AATAAA	-27	NA	172392910	172400542	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_172393142_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103773	chr2	+	214	1	Intergenic	novelGene_3203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGTTTATTTGTGGAG	NA	False	NA	NA	False	NA	NA	NA	172810186	172810400	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_172810200_172810400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103780	chr2	+	1744	12	FSM	ENSMUSG00000027509.12	ENSMUST00000029013.10	1742	12	3	-5	3	5	multi-exon	FALSE	canonical	3	1013	junction_10	106.078950794457	566	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCCAAGTTTCTCATCAT	NA	False	NA	90	True	NA	NA	NA	172841912	172857537	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103792	chr2	+	1794	4	FSM	ENSMUSG00000027510.18	ENSMUST00000029014.16	1768	4	-17	-9	-14	0	multi-exon	FALSE	canonical	3	657	junction_1	63.0766729200793	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTTGAGGTTTTTCTC	NA	False	NA	NA	False	AATAAA	-23	NA	172863677	172876527	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_172864064_172864584_172864709_172865119_172865175_172875298
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103803	chr2	+	1727	4	FSM	ENSMUSG00000027510.18	ENSMUST00000173878.8	936	4	30	-821	16	0	multi-exon	FALSE	canonical	0	0	junction_1	369.719713657071	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTTGAGGTTTTTCTC	NA	False	NA	NA	False	AATAAA	-23	NA	172863721	172876527	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_172864041_172864584_172864709_172865119_172865175_172875298
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103810	chr2	+	1886	4	FSM	ENSMUSG00000027510.18	ENSMUST00000173720.2	620	4	-182	-1084	16	0	multi-exon	FALSE	canonical	3	8	junction_1	365.954763446097	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTTGAGGTTTTTCTC	NA	False	NA	NA	False	AATAAA	-23	NA	172863721	172876527	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_172864200_172864584_172864709_172865119_172865175_172875298
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103815	chr2	+	1974	4	FSM	ENSMUSG00000027510.18	ENSMUST00000173997.2	440	4	-509	-1025	16	0	multi-exon	FALSE	canonical	2	17	junction_1	361.719351001421	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTTGAGGTTTTTCTC	NA	False	NA	NA	False	AATAAA	-23	NA	172863721	172876527	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_172864288_172864584_172864709_172865119_172865175_172875298
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103817	chr2	+	2271	3	FSM	ENSMUSG00000027510.18	ENSMUST00000155512.8	2281	3	16	-6	16	0	multi-exon	FALSE	canonical	3	757	junction_2	26	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTTGAGGTTTTTCTC	NA	False	NA	NA	False	AATAAA	-23	NA	172863721	172876527	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_172864709_172865119_172865175_172875298
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103843	chr2	+	1948	7	FSM	ENSMUSG00000027519.11	ENSMUST00000029024.10	7155	7	50	5157	-46	1032	multi-exon	FALSE	canonical	3	160	junction_6	19.3512847692917	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTAGTCCTTCCTGC	NA	False	NA	8	True	AATAAA	-21	NA	173501602	173543979	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_173501935_173503224_173503305_173529939_173530022_173536902_173536975_173537051_173537159_173537682_173537793_173542814
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103870	chr2	+	2148	12	FSM	ENSMUSG00000039263.17	ENSMUST00000044415.16	2467	12	-49	368	-49	0	multi-exon	FALSE	canonical	3	214	junction_9	24.2330284822489	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTCCGCTCACTTTT	NA	False	NA	8	True	ATTAAA	-17	NA	173952092	173964495	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336_173962461_173962740_173962918_173963271_173963383_173963883
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103880	chr2	+	2377	11	NIC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	237	junction_8	19.4907670449369	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTCCGCTCACTTTT	NA	False	NA	8	True	ATTAAA	-17	NA	173952143	173964495	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336_173962918_173963271_173963383_173963883
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103893	chr2	+	1632	12	NIC	ENSMUSG00000027523.21	novel	3903	13	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	236.631666212588	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGTTGCTCTTTGATT	NA	False	NA	15	True	AATAAA	-19	NA	174169504	174188537	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_174169735_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103916	chr2	+	217	1	Intergenic	novelGene_3204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTTCTGTGTGTATGG	NA	False	NA	NA	False	NA	NA	NA	174237242	174237459	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_174237200_174237500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103921	chr2	+	2272	15	FSM	ENSMUSG00000016253.13	ENSMUST00000109075.8	2279	15	17	-10	17	10	multi-exon	FALSE	canonical	3	502	junction_12	51.3083913254758	348	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTTCTTAAGCAGTCTG	NA	False	NA	50	True	AATAAA	-31	NA	174257613	174269305	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103955	chr2	-	1392	6	FSM	ENSMUSG00000016256.11	ENSMUST00000016400.9	1441	6	49	0	49	0	multi-exon	FALSE	canonical	3	493	junction_4	13.5292276202302	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGTACTTTATTTACA	5378	False	NA	0	True	AGTAAA	-17	NA	174280783	174269285	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_174269776_174270370_174270537_174270848_174271000_174275280_174275461_174279957_174280122_174280542
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103963	chr2	-	406	3	FSM	ENSMUSG00000016252.8	ENSMUST00000016396.8	421	3	14	1	-2	-1	multi-exon	FALSE	canonical	0	0	junction_1	1326.5	394	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTTTTGTTTCTGTTCT	NA	False	NA	-5	True	AATAAA	-21	NA	174305884	174302865	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_174303015_174304292_174304423_174305757
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000103977	chr2	-	1473	6	FSM	ENSMUSG00000016257.16	ENSMUST00000016401.15	1553	6	77	3	-70	-3	multi-exon	FALSE	canonical	3	812	junction_2	54.463198583998	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGAAGAGCAGCTCTTCC	NA	False	NA	-7	True	AATAAA	-42	NA	174314797	174306862	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_174307730_174308518_174308622_174308732_174308804_174310090_174310181_174311129_174311299_174314624
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104024	chr2	-	3397	4	Fusion	ENSMUSG00000078905.9_ENSMUSG00000081949.4	novel	625	4	NA	NA	-107	2726	multi-exon	FALSE	canonical	2	11	junction_3	30.0111090542597	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAACTTGCTTCTTGGTCA	NA	False	NA	NA	False	NA	NA	NA	174951915	174900615	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr2_-_174903715_174905392_174905454_174905660_174905788_174951805
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104034	chr2	+	182	1	Intergenic	novelGene_3205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCACATAATTATAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	174913981	174914163	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_174914000_174914200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104046	chr2	-	4963	4	FSM	ENSMUSG00000090093.9	ENSMUST00000109060.8	1911	4	-37	-3015	-37	2380	multi-exon	FALSE	canonical	3	26	junction_1	19.3964487013015	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	174983842	174968905	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_174973563_174974721_174974783_174974988_174975116_174983724
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104055	chr2	-	419	3	Fusion	ENSMUSG00000078902.4_ENSMUSG00000090093.9	novel	703	3	NA	NA	11	143	multi-exon	FALSE	canonical	3	30	junction_1	2.5	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGATATGTAATTATTGT	NA	False	NA	NA	False	NA	NA	NA	175017653	174974574	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr2_-_174974783_174974988_174975089_175017542
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104063	chr2	-	4510	4	FSM	ENSMUSG00000078902.4	ENSMUST00000109054.3	4516	4	6	0	6	0	multi-exon	FALSE	canonical	3	92	junction_1	16.3571255285137	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	-4	True	NA	NA	NA	175017658	175008047	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_175012254_175013387_175013449_175013640_175013768_175017542
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104074	chr2	-	4648	5	FSM	ENSMUSG00000078903.11	ENSMUST00000109058.9	1854	5	-7	-2787	-7	-1062	multi-exon	FALSE	canonical	3	35	junction_1	82.2936814099357	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175048717	175033919	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_175038181_175039337_175039399_175039599_175039727_175044851_175044907_175048573
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104096	chr2	+	4338	4	FSM	ENSMUSG00000094475.8	ENSMUST00000178120.8	1497	4	-53	-2788	-53	2788	multi-exon	FALSE	canonical	3	15	junction_3	123.327026865791	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175435717	175448441	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_175435774_175442797_175442925_175443129_175443191_175444347
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104117	chr2	-	4723	5	NNC	ENSMUSG00000095648.8	novel	1749	4	NA	NA	-3641	2787	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_3	46.0027173110459	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175895259	175880596	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_-_175884942_175886096_175886158_175886363_175886491_175891615_175891671_175895124
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104129	chr2	-	185	1	Intergenic	novelGene_3206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAGAAATTTTT	NA	False	NA	NA	False	NA	NA	NA	176032975	176032790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_176032800_176033000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104152	chr2	+	182	1	Intergenic	novelGene_3207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCACATAATTATAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	176509258	176509440	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_176509300_176509400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104162	chr2	-	3776	5	NNC	ENSMUSG00000074527.12	novel	3823	5	NA	NA	12	8	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	34.8093019177346	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGGGATAGACAGAAACAT	NA	False	NA	NA	False	AATAAA	-33	NA	176619575	176605834	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_-_176609305_176610459_176610521_176610725_176610853_176615991_176616047_176619512
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104168	chr2	+	4688	5	NIC	ENSMUSG00000078875.11	novel	683	5	NA	NA	-9	2787	combination_of_known_junctions	FALSE	canonical	3	46	junction_2	44.7178655572915	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	176692739	176707367	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_176692840_176696293_176696349_176701473_176701601_176701806_176701868_176703022
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104183	chr2	-	182	1	Intergenic	novelGene_3208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCACATAATTATAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	176762701	176762519	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_176762500_176762700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104189	chr2	-	217	1	Intergenic	novelGene_3209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGGACATTGAAAACTG	NA	False	NA	NA	False	TTTAAA	-5	NA	176764841	176764624	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_176764600_176764800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104194	chr2	+	3710	4	FSM	ENSMUSG00000078872.10	ENSMUST00000108970.9	948	4	-106	-2656	-106	2343	multi-exon	FALSE	canonical	3	143	junction_2	72.8666971637631	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGCCTGGTGAGATGGC	NA	False	NA	NA	False	AATAAA	-18	NA	176766006	176781483	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_176766152_176776035_176776163_176776368_176776430_176778106
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104203	chr2	+	395	4	NNC	ENSMUSG00000078872.10	novel	948	4	NA	NA	-51	33916	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	117.565111982916	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGTAATTCCTCCCCAA	NA	False	NA	NA	False	NA	NA	NA	176766061	176813056	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_176766152_176776035_176776163_176776368_176776430_176812939
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104222	chr2	-	4433	5	NIC	ENSMUSG00000078870.10	novel	1113	4	NA	NA	-15	3171	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	120.131958695428	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	176898229	176881978	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_176886072_176887228_176887290_176887494_176887622_176894619_176894675_176898132
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104230	chr2	+	193	1	Intergenic	novelGene_3210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTTTTCCTAATTAATA	NA	False	NA	NA	False	NA	NA	NA	176939856	176940049	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_176939900_176940000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104235	chr2	-	254	1	Intergenic	novelGene_3211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGGAATCCAGAACTCTT	NA	False	NA	NA	False	NA	NA	NA	176949014	176948760	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_176948800_176949000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104243	chr2	-	2801	3	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-62781	1704	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	250.5	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGTCTGTCCATCCT	NA	False	NA	NA	False	NA	NA	NA	177021610	176954742	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_-_176957402_176958542_176958604_177021529
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104260	chr2	-	429	5	Fusion	ENSMUSG00000078869.3_ENSMUSG00000078868.4	novel	1050	3	NA	NA	-72	-841	multi-exon	FALSE	canonical	0	0	junction_3	219.014268941546	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGACTGTAACCAATGTG	NA	False	NA	-36	True	NA	NA	NA	177016172	176957287	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr2_-_176957402_176958542_176958604_176958795_176958923_177012912_177012965_177016097
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104279	chr2	-	480	6	NIC	ENSMUSG00000078867.10	novel	588	7	NA	NA	8	3	combination_of_known_splicesites	FALSE	canonical	3	51	junction_2	99.4633600880244	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATGACTGTAACCAATG	NA	False	NA	NA	False	NA	NA	NA	177090104	177079690	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_177079803_177080953_177081015_177081219_177081347_177081614_177081652_177086489_177086545_177090016
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104299	chr2	+	4245	5	NIC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-41	2548	intron_retention	FALSE	canonical	3	153	junction_2	35.4436171968946	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	177189966	177204104	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104304	chr2	+	4185	4	FSM	ENSMUSG00000094786.2	ENSMUST00000108947.3	1209	4	-136	-2840	-36	2548	multi-exon	FALSE	canonical	3	122	junction_1	52.0405824546788	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	177189971	177204104	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_177190111_177198701_177198829_177199035_177199097_177200246
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104311	chr2	+	4132	7	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-14	57338	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	95.248213748197	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177189993	177258894	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246_177200570_177200654_177204066_177258856
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104332	chr2	+	4048	6	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	15	57338	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	97.9991836700694	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177190022	177258894	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_177190111_177198701_177198829_177199035_177199097_177200246_177200570_177200654_177204066_177258856
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104341	chr2	-	248	1	Intergenic	novelGene_3212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGGAATCCAGAACTCTT	NA	False	NA	NA	False	NA	NA	NA	177253692	177253444	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_177253400_177253700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104356	chr2	-	3146	5	NIC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	5	1737	combination_of_known_junctions	FALSE	canonical	3	253	junction_4	344.203700590217	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGTCTGTCCATCCT	2342	False	NA	NA	False	NA	NA	NA	177269998	177259259	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_177262087_177263226_177263288_177263479_177263607_177266761_177266817_177269922
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104393	chr2	+	4058	6	FSM	ENSMUSG00000078864.11	ENSMUST00000148388.2	744	6	-1	-3313	-1	2803	multi-exon	FALSE	canonical	3	97	junction_4	86.0497530501977	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177401079	177415068	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_177401169_177404638_177404694_177409531_177409569_177409836_177409964_177410168_177410230_177411379
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104397	chr2	+	4114	6	NNC	ENSMUSG00000078864.11	novel	744	6	NA	NA	8	2803	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_3	118.732640836461	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177401088	177415068	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_177401169_177404638_177404694_177405994_177406097_177409836_177409964_177410168_177410230_177411379
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104399	chr2	+	4012	5	NIC	ENSMUSG00000078864.11	novel	744	6	NA	NA	8	2803	combination_of_known_junctions	FALSE	canonical	3	49	junction_2	122.051218756717	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177401088	177415068	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_177401169_177404638_177404694_177409836_177409964_177410168_177410230_177411379
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104412	chr2	-	182	1	Intergenic	novelGene_3213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCACATAATTATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	177467341	177467159	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_177467200_177467300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104426	chr2	-	4320	3	NIC	ENSMUSG00000095362.8	novel	1576	4	NA	NA	-5	2800	combination_of_known_splicesites	FALSE	canonical	3	28	junction_1	355.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	-4	True	NA	NA	NA	177482116	177470783	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_-_177474890_177476312_177476440_177482029
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104447	chr2	+	219	1	Intergenic	novelGene_3214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCATTCTCATCTACTCC	NA	False	NA	NA	False	NA	NA	NA	177488865	177489084	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_177488900_177489100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104455	chr2	-	4667	5	FSM	ENSMUSG00000078862.11	ENSMUST00000108930.9	1807	5	-54	-2806	-54	2806	multi-exon	FALSE	canonical	3	25	junction_3	8.13557004763649	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177599144	177584523	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_177588804_177589962_177590024_177590229_177590357_177595474_177595530_177599000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104481	chr2	+	1680	1	FSM	ENSMUSG00000061897.6	ENSMUST00000118761.2	456	1	-187	-1037	-187	1037	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAACTTTAAATGTTC	NA	False	NA	NA	False	ATTAAA	-33	NA	178819030	178820710	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_178819000_178820700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104493	chr2	+	6030	14	ISM	ENSMUSG00000000305.13	ENSMUST00000000314.13	6388	16	337821	0	3089	0	3prime_fragment	FALSE	canonical	3	15	junction_11	4.62690868979156	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTCTCCCGACTTGCTT	7091	False	NA	4	True	AATAAA	-16	NA	179422044	179541166	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_+_179422274_179439250_179439422_179484761_179484918_179489012_179489158_179501909_179502083_179515864_179516003_179523602_179523789_179527646_179527901_179528512_179528656_179530881_179531116_179532535_179532770_179534984_179535125_179535820_179535986_179537504
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104531	chr2	+	2670	10	NIC	ENSMUSG00000039108.15	novel	2534	9	NA	NA	-19	0	combination_of_known_junctions	TRUE	canonical	3	24	junction_3	16.1176232049821	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGCCTCTGTCCGTCAC	NA	False	NA	15	True	AATAAA	-16	NA	179666760	179677254	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_179667106_179668427_179668592_179669692_179669829_179670750_179670868_179673153_179673322_179673586_179673665_179673853_179674016_179674293_179674445_179675478_179675664_179676090
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104534	chr2	+	2544	9	FSM	ENSMUSG00000039108.15	ENSMUST00000055485.12	2534	9	-10	0	-10	0	multi-exon	FALSE	canonical	3	38	junction_3	10.2705586508232	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGCCTCTGTCCGTCAC	NA	False	NA	15	True	AATAAA	-16	NA	179666769	179677254	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_179667106_179668427_179668592_179669692_179669829_179673153_179673322_179673586_179673665_179673853_179674016_179674293_179674445_179675478_179675664_179676090
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104542	chr2	-	959	7	FSM	ENSMUSG00000027566.16	ENSMUST00000029082.9	914	7	-31	-14	-31	14	multi-exon	FALSE	canonical	3	3926	junction_1	568.041078326794	876	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCGTCATTTGGGTGCA	NA	False	NA	2	True	AATAAA	-31	NA	179684257	179678152	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_179678367_179678730_179678794_179679175_179679296_179679857_179679981_179680517_179680643_179681145_179681273_179684070
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104564	chr2	+	1709	10	NIC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	103	junction_3	39.9749921826134	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTGTCTGTGTCTTTA	NA	False	NA	NA	False	AATATA	-1	NA	179712375	179727695	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_179712409_179713586_179713680_179714932_179715027_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104578	chr2	+	1465	8	NIC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	60.3080527333605	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTGTCTGTGTCTTTA	NA	False	NA	NA	False	AATATA	-1	NA	179712386	179727695	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_179712409_179713586_179713680_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104592	chr2	-	194	1	Intergenic	novelGene_3215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	284	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGCTGGTGAGATGGC	NA	False	NA	NA	False	NA	NA	NA	179718955	179718761	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_179718800_179719000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104599	chr2	+	190	1	ISM	ENSMUSG00000039069.20	ENSMUST00000142608.8	2339	5	9636	190	1605	-190	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTGCCAAGGCTGGT	NA	False	NA	NA	False	NA	NA	NA	179722020	179722210	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr2_+_179722000_179722200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104614	chr2	+	2797	14	FSM	ENSMUSG00000039050.9	ENSMUST00000040668.9	2805	14	10	-2	10	2	multi-exon	TRUE	canonical	3	166	junction_6	20.3809866146027	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGTTGAAGGTTTGATT	NA	False	NA	12	True	ATTAAA	-18	NA	179761108	179804475	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_179761263_179778771_179778906_179780005_179780151_179782897_179782974_179786624_179786760_179786881_179786980_179790218_179790402_179791971_179792080_179792808_179792899_179794991_179795116_179797059_179797201_179799621_179799746_179800821_179800913_179803281
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104617	chr2	+	2770	14	NNC	ENSMUSG00000039050.9	novel	2805	14	NA	NA	10	2	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	46.788963448571	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGTTGAAGGTTTGATT	NA	False	NA	12	True	ATTAAA	-18	NA	179761108	179804475	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_179761263_179778771_179778906_179780032_179780151_179782897_179782974_179786624_179786760_179786881_179786980_179790218_179790402_179791971_179792080_179792808_179792899_179794991_179795116_179797059_179797201_179799621_179799746_179800821_179800913_179803281
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104627	chr2	+	1557	10	FSM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	-19	-3	-19	3	multi-exon	FALSE	canonical	3	1931	junction_6	170.679108342794	521	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGGGCCTGTGTTACT	NA	False	NA	5	True	AATAAA	-25	NA	179813258	179818082	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817186_179817390_179817549_179817646_179817750_179817866
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104654	chr2	+	199	1	Intergenic	novelGene_3216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATTGGGAGCCCCAGTTTC	NA	False	NA	NA	False	NA	NA	NA	179826620	179826819	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_179826600_179826800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104657	chr2	+	185	1	Intergenic	novelGene_3217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAGTGAATATTCTAAAA	NA	False	NA	NA	False	NA	NA	NA	179885354	179885539	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_179885400_179885500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104669	chr2	+	394	6	FSM	ENSMUSG00000039001.13	ENSMUST00000059080.7	394	6	-1	1	-1	-1	multi-exon	FALSE	canonical	3	3954	junction_5	1417.02976680097	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCTTTTGCTGTTTTTA	NA	False	NA	25	True	AATAAA	-26	NA	179899168	179900237	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_179899241_179899413_179899477_179899580_179899645_179899778_179899851_179900022_179900079_179900170
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104687	chr2	-	2976	10	FSM	ENSMUSG00000038990.15	ENSMUST00000108891.2	2975	10	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_5	39.9001841018062	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGCTTGTCTCCTTT	NA	False	NA	0	True	AGTAAA	-19	NA	179915289	179900331	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179902974_179903308_179903475_179903909_179904019_179904870_179904949_179906006_179906100_179906195_179906268_179914892
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104756	chr2	-	4675	6	FSM	ENSMUSG00000038914.16	ENSMUST00000103055.8	4613	6	-62	0	-62	0	multi-exon	FALSE	canonical	3	159	junction_5	13.3626344707921	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTATCCTTCTGTGT	NA	False	NA	-7	True	TTTAAA	-31	NA	180351854	180322850	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104777	chr2	+	199	1	Intergenic	novelGene_3218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGCATTCACTGATAAG	NA	False	NA	NA	False	NA	NA	NA	180357092	180357291	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_180357100_180357300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104784	chr2	+	2275	13	FSM	ENSMUSG00000023393.16	ENSMUST00000094218.4	2275	13	0	0	0	0	multi-exon	TRUE	canonical	3	124	junction_2	30.6879455161143	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTGTTTTATTCAATA	NA	False	NA	29	True	ATTAAA	-14	NA	180367055	180384073	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_180367245_180373672_180373871_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104792	chr2	+	2560	12	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	-46	0	intron_retention	FALSE	canonical	3	182	junction_6	18.7713514794124	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTGTTTTATTCAATA	NA	False	NA	29	True	ATTAAA	-14	NA	180367125	180384073	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_180367245_180373672_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104797	chr2	+	2108	13	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	51.5985437994351	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTGTTTTATTCAATA	NA	False	NA	29	True	ATTAAA	-14	NA	180367152	180384073	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr2_+_180367245_180373672_180373801_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104802	chr2	-	205	1	Intergenic	novelGene_3219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTTTATGTTTTTAAC	NA	False	NA	NA	False	NA	NA	NA	180393627	180393422	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_180393400_180393600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104807	chr2	+	189	1	Intergenic	novelGene_3220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGGCTGGAGAGATGGC	NA	False	NA	NA	False	NA	NA	NA	180523700	180523889	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_180523700_180523900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104814	chr2	+	200	1	Intergenic	novelGene_3221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATGTTTAAAAAAATGTCA	NA	False	NA	NA	False	NA	NA	NA	180543571	180543771	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_180543600_180543800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104828	chr2	-	2619	6	NNC	ENSMUSG00000038848.15	novel	3184	5	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_2	228.880230688454	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTGTTCTTGTTTTC	NA	False	NA	-2	True	NA	NA	NA	180562750	180546169	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_-_180547462_180552479_180553254_180553826_180554001_180560927_180561008_180562104_180562130_180562476
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104834	chr2	-	216	1	Intergenic	novelGene_3222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTCCTTTTCAGAGTTT	NA	False	NA	NA	False	AAGAAA	-23	NA	180549774	180549558	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_180549600_180549800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104858	chr2	+	861	5	FSM	ENSMUSG00000016344.15	ENSMUST00000016488.13	1160	5	34	265	-15	2	multi-exon	TRUE	canonical	3	201	junction_1	270.955139275859	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTATGTTTGAAACAT	3370	False	NA	3	True	AATAAA	-19	NA	180829073	180830299	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_180829248_180829342_180829530_180829601_180829680_180829796_180829894_180829974
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104886	chr2	+	187	1	Intergenic	novelGene_3223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGCTCTCGAGCCCTTTA	6380	False	NA	NA	False	NA	NA	NA	180832083	180832270	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_180832100_180832300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104897	chr2	-	233	1	Intergenic	novelGene_3224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATAAATGCTTAGGCCAA	NA	False	NA	NA	False	NA	NA	NA	180833873	180833640	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_180833600_180833900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104901	chr2	-	4117	10	FSM	ENSMUSG00000038705.14	ENSMUST00000049032.13	4121	10	4	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	10.3171916936948	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTTGTCTCTTGTAA	6180	False	NA	-4	True	AATAAA	-16	NA	180929824	180893241	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_180896217_180896934_180897058_180897287_180897426_180897664_180897737_180900776_180900935_180902087_180902192_180906773_180906902_180907607_180907706_180919741_180919915_180929676
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104911	chr2	+	234	1	Intergenic	novelGene_3225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCAAAATAAGAATTTTGGA	NA	False	NA	NA	False	AAAAAG	-32	NA	180926401	180926635	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_180926400_180926600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104920	chr2	-	928	5	FSM	ENSMUSG00000027581.13	ENSMUST00000103045.4	1136	5	213	-5	213	5	multi-exon	FALSE	canonical	3	148	junction_1	19.0312243431683	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGGCTTTTCATTCAGG	NA	False	NA	-1	True	AATAAA	-21	NA	180956080	180948246	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_180948617_180949008_180949201_180950513_180950690_180950939_180951036_180955986
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104927	chr2	+	4440	34	FSM	ENSMUSG00000038685.19	ENSMUST00000108814.8	4322	34	-80	-38	-34	0	multi-exon	FALSE	canonical	3	117	junction_31	42.9439380842258	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961497	180998409	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104931	chr2	+	4318	33	FSM	ENSMUSG00000038685.19	ENSMUST00000108815.8	4243	33	-74	-1	-28	1	multi-exon	FALSE	canonical	3	92	junction_30	41.94582396899	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTCTGTATTGTGGTCTT	NA	False	NA	16	True	AATAAA	-17	NA	180961503	180998410	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997120_180997346_180997443_180997606_180997716
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104971	chr2	-	1709	8	FSM	ENSMUSG00000038671.16	ENSMUST00000127988.8	2447	8	72	666	2	601	multi-exon	FALSE	canonical	3	258	junction_2	23.8627025172878	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTTCAATCAGTTAGATG	6148	False	NA	-15	True	AATAAA	-18	NA	181007125	181000291	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007011
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104979	chr2	+	1924	7	NNC	ENSMUSG00000027582.17	novel	2072	6	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	46.3204418516634	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTCAGTGGAGACTCAG	NA	False	NA	9	True	ATTAAA	-16	NA	181007197	181022579	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr2_+_181007286_181007437_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000104985	chr2	+	2083	6	FSM	ENSMUSG00000027582.17	ENSMUST00000108807.9	2072	6	1	-12	1	0	multi-exon	FALSE	canonical	3	135	junction_3	10.1074230147946	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGACTCAGCTGGCTTC	NA	False	NA	17	True	ATTAAA	-24	NA	181007198	181022587	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105002	chr2	+	232	1	Intergenic	novelGene_3226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCAGTTTGCTCATCTGT	NA	False	NA	NA	False	NA	NA	NA	181137853	181138085	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_181137900_181138100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105028	chr2	+	2270	6	FSM	ENSMUSG00000000827.19	ENSMUST00000108800.8	3475	6	0	1205	0	501	multi-exon	FALSE	canonical	3	271	junction_3	391.498454658508	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCATTTGTTTGGTCTGT	NA	False	NA	10	True	AATAAA	-24	NA	181138979	181158550	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181149958_181150061_181154831_181154881_181156872
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105045	chr2	+	4312	5	FSM	ENSMUSG00000000826.17	ENSMUST00000072334.12	6578	5	19	2247	19	637	multi-exon	FALSE	canonical	3	111	junction_4	50.7413785780402	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGTTTCTTGAAGTGT	7024	False	NA	16	True	AATAAA	-17	NA	181162296	181194679	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181191065
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105051	chr2	+	4368	6	FSM	ENSMUSG00000000826.17	ENSMUST00000116365.9	3728	6	-3	-637	-3	637	multi-exon	FALSE	canonical	3	78	junction_5	67.7642973843897	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGTTTCTTGAAGTGT	7043	False	NA	16	True	AATAAA	-17	NA	181162315	181194679	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105068	chr2	-	187	1	Intergenic	novelGene_3227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTGATGGCCAATGAGC	NA	False	NA	-4	True	NA	NA	NA	181177259	181177072	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_181177100_181177300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105073	chr2	-	196	1	Intergenic	novelGene_3228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATAAGTGCACTCACTGT	NA	False	NA	NA	False	NA	NA	NA	181182159	181181963	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_181182000_181182200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105083	chr2	-	234	1	Intergenic	novelGene_3229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAGACTAAGACTACATCA	2188	False	NA	NA	False	NA	NA	NA	181200822	181200588	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_181200600_181200800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105089	chr2	+	189	1	Intergenic	novelGene_3230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTGGAACCAAAAACAAAACA	7153	False	NA	NA	False	NA	NA	NA	181208331	181208520	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_181208300_181208500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105101	chr2	-	1820	15	FSM	ENSMUSG00000089917.8	ENSMUST00000057816.15	1849	15	26	3	-4	0	multi-exon	FALSE	canonical	3	84	junction_14	14.4936650482413	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCGTGTGGCAGAATGTA	4573	False	NA	-2	True	AATAAA	-20	NA	181223775	181210944	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_181211184_181211260_181211418_181211488_181211597_181211701_181211825_181211925_181211989_181212101_181212196_181212292_181212392_181214262_181214280_181214866_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105108	chr2	-	2148	5	FSM	ENSMUSG00000038605.12	ENSMUST00000060173.9	2164	5	16	0	2	0	multi-exon	FALSE	canonical	3	33	junction_4	9.60143218483576	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCAGTGTTGGGTCTCT	1045	False	NA	-2	True	AATAAA	-14	NA	181240989	181237010	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_181238399_181238539_181238681_181238964_181239137_181239220_181239403_181240724
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105131	chr2	+	226	1	Intergenic	novelGene_3231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAATAAAACATCTTTAA	7232	False	NA	NA	False	NA	NA	NA	181247849	181248075	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_181247800_181248100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105135	chr2	-	225	1	Intergenic	novelGene_3232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACAGATGGTTCCAGAACA	NA	False	NA	NA	False	NA	NA	NA	181252024	181251799	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_181251800_181252000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105141	chr2	-	208	1	Intergenic	novelGene_3233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTCTATTGAGGGCTGG	NA	False	NA	NA	False	TATAAA	-14	NA	181267529	181267321	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_181267300_181267500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105155	chr2	+	140	1	Intergenic	novelGene_3234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATTAAAAAAAAGATGTAT	512	False	NA	NA	False	NA	NA	NA	181293255	181293395	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_181293300_181293400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105160	chr2	-	172	1	Intergenic	novelGene_3235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATAGATTAATAGT	6490	False	NA	NA	False	NA	NA	NA	181307823	181307651	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_-_181307700_181307800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105165	chr2	+	217	1	Intergenic	novelGene_3236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGGGGGGGGTGTTTGTTT	1481	False	NA	NA	False	TTTAAA	-9	NA	181308235	181308452	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_181308200_181308500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105180	chr2	-	1465	6	FSM	ENSMUSG00000002458.14	ENSMUST00000002532.9	1511	6	46	0	-1	0	multi-exon	FALSE	canonical	3	85	junction_5	20.8461027532726	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTTGTTCTTTCAAGTT	NA	False	NA	-15	True	AATAAA	-14	NA	181335724	181330214	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_-_181331089_181331169_181331405_181331494_181331570_181333025_181333148_181333282_181333389_181335671
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105187	chr2	+	205	1	Intergenic	novelGene_3237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGGGGAGTAGTTGGGT	NA	False	NA	NA	False	NA	NA	NA	181341755	181341960	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr2_+_181341800_181342000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105201	chr2	+	3514	7	FSM	ENSMUSG00000027589.15	ENSMUST00000029116.14	3569	7	46	9	-13	6	multi-exon	FALSE	canonical	3	52	junction_6	11.3431330181157	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCAGTATTGCTTCTGTG	NA	False	NA	17	True	AATAAA	-20	NA	181479692	181499245	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_181479778_181482947_181483132_181484167_181484499_181486188_181486292_181488260_181488433_181493378_181493503_181496730
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105210	chr2	+	2196	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	87	665	64	-665	multi-exon	FALSE	canonical	3	712	junction_2	38.5	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTAGAGTTTTGATTTT	8983	False	NA	NA	False	NA	NA	NA	181506216	181511958	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr2_+_181506363_181507738_181507827_181509996
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105220	chr3	+	198	1	Intergenic	novelGene_3238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATAATGATATTCTCAACA	NA	False	NA	NA	False	NA	NA	NA	6048483	6048681	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_6048500_6048700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105236	chr3	+	3248	9	FSM	ENSMUSG00000043542.13	ENSMUST00000051064.9	3292	9	-29	73	-29	-73	multi-exon	FALSE	canonical	3	121	junction_7	36.9256008752735	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGCTTGTTATGTTTAT	NA	False	NA	-63	True	AATAAA	-16	NA	7568513	7618823	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_7568588_7581515_7581593_7583423_7583541_7589185_7589328_7591328_7591478_7593089_7593190_7593644_7593745_7604135_7604244_7616442
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105246	chr3	+	1934	5	FSM	ENSMUSG00000027500.11	ENSMUST00000029002.9	2073	5	142	-3	-13	3	multi-exon	FALSE	canonical	3	1699	junction_2	84.762535946018	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTTTGGTCTGGTCTCTCG	NA	False	NA	26	True	AATAAA	-26	NA	8574561	8626669	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_8574691_8606900_8606997_8610632_8610806_8619851_8620044_8625325
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105258	chr3	-	693	3	FSM	ENSMUSG00000040269.6	ENSMUST00000042148.6	783	3	90	0	90	0	multi-exon	FALSE	canonical	3	890	junction_1	0.5	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGCCGTGGTTCTTTT	NA	False	NA	-1	True	NA	NA	NA	8988888	8867205	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_8867475_8965045_8965228_8988646
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105265	chr3	-	3346	6	FSM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	-62	3033	-62	0	multi-exon	FALSE	canonical	0	0	junction_1	1105.06589848751	1218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTCTTTTTTATGTATT	NA	False	NA	NA	False	AATAAA	-17	NA	9069845	8993685	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105286	chr3	+	202	1	Intergenic	novelGene_3239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAACTCCACACCTG	NA	False	NA	NA	False	NA	NA	NA	9214382	9214584	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_9214400_9214600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105296	chr3	+	242	1	Intergenic	novelGene_3240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTTCTTTTTCACACAT	NA	False	NA	NA	False	NA	NA	NA	9278177	9278419	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_9278200_9278400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105314	chr3	+	306	1	Intergenic	novelGene_3241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAGAGCTATACAT	4112	False	NA	NA	False	NA	NA	NA	9662486	9662792	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_9662500_9662800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105319	chr3	-	178	1	Intergenic	novelGene_3242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACACAGGCTCAACTGT	NA	False	NA	NA	False	NA	NA	NA	9980206	9980028	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_9980000_9980200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105324	chr3	+	698	4	FSM	ENSMUSG00000027533.11	ENSMUST00000029046.9	987	4	21	268	21	4	multi-exon	FALSE	canonical	3	202	junction_1	88.411914732499	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATATGTGTGTGGGTTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	10077628	10081399	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_10077779_10080030_10080204_10080531_10080634_10081126
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105330	chr3	+	233	1	Intergenic	novelGene_3243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	402	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTACTCTATTTTTCTC	NA	False	NA	NA	False	TTTAAA	-11	NA	10285387	10285620	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_10285400_10285600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105342	chr3	-	186	1	Intergenic	novelGene_3244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGCAATGAATTTGTTT	NA	False	NA	5	True	NA	NA	NA	10366816	10366630	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_10366600_10366800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105353	chr3	-	2172	9	FSM	ENSMUSG00000027531.17	ENSMUST00000065938.15	4185	9	23	1990	23	8	multi-exon	FALSE	canonical	3	306	junction_8	38.1901083397259	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATTTTCTTTCATTGTA	NA	False	NA	-4	True	ATTAAA	-25	NA	10396476	10379005	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_10380362_10381162_10381315_10386671_10386781_10387963_10388073_10389111_10389158_10391166_10391272_10393404_10393539_10394002_10394069_10396381
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105360	chr3	-	1609	8	FSM	ENSMUSG00000039795.15	ENSMUST00000037839.12	1610	8	1	0	0	0	multi-exon	FALSE	canonical	3	339	junction_1	173.164190104923	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGCATTTGATCTATAA	NA	False	NA	-1	True	AATAAA	-45	NA	10416376	10405012	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10413613_10416301
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105363	chr3	-	4114	8	NIC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	88	junction_7	242.301296668728	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGCATTTGATCTATAA	NA	False	NA	-1	True	AATAAA	-45	NA	10416376	10405012	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10416118_10416301
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105381	chr3	-	2139	9	NNC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	0	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	284.168084062936	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTCCTGTAACAAAGCGA	NA	False	NA	-26	True	AATAAA	-20	NA	10416376	10405037	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10413613_10415562_10416118_10416301
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105389	chr3	-	4295	8	NIC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	-1	-23	combination_of_known_splicesites	FALSE	canonical	3	88	junction_7	262.710595794797	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTCCTGTAACAAAGCGA	NA	False	NA	-26	True	AATAAA	-20	NA	10416375	10405037	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412472_10413569_10416118_10416301
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105394	chr3	-	1872	7	NIC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	0	-25	intron_retention	FALSE	canonical	3	120	junction_5	243.390404266251	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCTTCCTGTAACAAAGC	NA	False	NA	-28	True	AATAAA	-18	NA	10416376	10405039	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411298_10412224_10412472_10413569_10413613_10416301
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105399	chr3	+	280	1	Intergenic	novelGene_3245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGCTCTCCATTTCTAG	NA	False	NA	NA	False	AATAAA	-27	NA	10418042	10418322	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_10418000_10418300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105414	chr3	-	2632	8	FSM	ENSMUSG00000027534.17	ENSMUST00000029047.12	2288	8	-15	-329	0	0	multi-exon	FALSE	canonical	3	117	junction_2	14.2771402841703	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGAGTGTTATCAGTGTC	NA	False	NA	2	True	AATAAA	-27	NA	10505162	10482876	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_10484284_10485256_10485377_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870_10503345_10504974
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105438	chr3	-	428	4	FSM	ENSMUSG00000078784.9	ENSMUST00000185384.7	435	4	7	0	7	0	multi-exon	FALSE	canonical	3	4849	junction_3	245.494512271773	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTAAATCTTGTTAAT	NA	False	NA	0	True	AATAAA	-23	NA	14676338	14671343	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_14671469_14672236_14672354_14674600_14674718_14676269
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105448	chr3	-	1169	3	FSM	ENSMUSG00000078784.9	ENSMUST00000186870.7	1174	3	5	0	-2	0	multi-exon	FALSE	canonical	3	4849	junction_2	211	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTTCTTTAAATCTTG	NA	False	NA	-5	True	AATAAA	-18	NA	14676316	14671348	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_14672354_14674600_14674718_14676269
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105454	chr3	-	186	1	Intergenic	novelGene_3246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAATGAGCAAAACAC	NA	False	NA	NA	False	NA	NA	NA	14685788	14685602	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_14685600_14685800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105471	chr3	+	1525	7	FSM	ENSMUSG00000027562.13	ENSMUST00000029078.9	1788	7	263	0	52	0	multi-exon	FALSE	canonical	3	122	junction_4	9.4339811320566	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGGTGCCTGATTGTCT	NA	False	NA	11	True	AATAAA	-14	NA	14951750	14965830	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_14951847_14952893_14953092_14960081_14960201_14960594_14960688_14961759_14961823_14962973_14963130_14965030
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105477	chr3	+	1451	1	Intergenic	novelGene_3247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGCACAGGCATGGAACT	NA	False	NA	NA	False	AATAAA	-42	NA	15685326	15686777	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_15685300_15686800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105493	chr3	+	5159	6	FSM	ENSMUSG00000047213.15	ENSMUST00000108346.5	4929	6	-48	-182	-24	0	multi-exon	FALSE	canonical	3	147	junction_4	138.147167904377	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTTCTTTCCTTTTTA	NA	False	NA	14	True	AATAAA	-16	NA	16237351	16271201	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257350_16257384_16257989_16259589_16268118
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105516	chr3	+	192	1	Intergenic	novelGene_3248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAAGTAAAAATACTTAT	NA	False	NA	NA	False	NA	NA	NA	17765511	17765703	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_17765500_17765700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105523	chr3	-	2948	7	FSM	ENSMUSG00000027599.10	ENSMUST00000029125.10	3673	7	-14	739	-14	-739	multi-exon	TRUE	canonical	3	251	junction_6	16.1761140780679	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTGTATTTTTAAATTT	NA	False	NA	-3	True	AATAAA	-23	NA	19217243	19186304	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_19188388_19189006_19189082_19189170_19189288_19198493_19198684_19203649_19203742_19211635_19211857_19217073
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105528	chr3	-	2924	7	NNC	ENSMUSG00000027599.10	novel	3673	7	NA	NA	-11	-742	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	91.40280204798	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTTATTGTATTTTTAAA	NA	False	NA	-6	True	AATAAA	-20	NA	19217240	19186307	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr3_-_19188370_19189006_19189082_19189170_19189288_19198493_19198684_19203649_19203742_19211635_19211857_19217073
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105541	chr3	+	184	1	Intergenic	novelGene_3249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTAGTGTCTTAGTTAGG	1806	False	NA	NA	False	NA	NA	NA	19219458	19219642	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_19219500_19219600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105547	chr3	+	2830	8	FSM	ENSMUSG00000027601.14	ENSMUST00000130645.8	2953	8	120	3	-35	-3	multi-exon	FALSE	canonical	3	831	junction_1	130.277568667669	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTATTTGTATATTTAT	NA	False	NA	47	True	AATAAA	-33	NA	19242393	19274978	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_19242453_19254189_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105555	chr3	+	2800	8	NNC	ENSMUSG00000027601.14	novel	2953	8	NA	NA	-13	-6	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_4	376.85898407435	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATCTATTTGTATATT	NA	False	NA	44	True	AATAAA	-30	NA	19242415	19274975	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr3_+_19242453_19254189_19254332_19260615_19260715_19265631_19265748_19269639_19269868_19271343_19271588_19272325_19272486_19273201
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105564	chr3	+	3369	8	NIC	ENSMUSG00000027601.14	novel	904	4	NA	NA	18	-6	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	397.600609780668	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATCTATTTGTATATT	NA	False	NA	44	True	AATAAA	-30	NA	19242455	19274975	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_+_19243057_19254189_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105597	chr3	+	4955	25	FSM	ENSMUSG00000002428.13	ENSMUST00000002502.12	4955	25	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_12	28.4765680965168	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTCACTTAGTGACT	6938	False	NA	16	True	AATAAA	-20	NA	20111974	20172654	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105601	chr3	+	3913	26	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_25	37.5784193387641	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTCACTTAGTGACT	6946	False	NA	16	True	AATAAA	-20	NA	20111982	20172654	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735_20170908_20171941
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105613	chr3	-	1669	7	FSM	ENSMUSG00000019528.19	ENSMUST00000178328.8	1698	7	32	-3	5	0	multi-exon	FALSE	canonical	3	45	junction_2	8.93805845186128	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTGTTTAAGTACTT	NA	False	NA	-2	True	AATAAA	-15	NA	20209228	20176247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_20177029_20179421_20179642_20192180_20192308_20204702_20204866_20205116_20205292_20206893_20207030_20209161
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105619	chr3	+	195	1	Intergenic	novelGene_3250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATGTTAAGAATTTACAAA	NA	False	NA	NA	False	NA	NA	NA	21655381	21655576	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_21655400_21655600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105629	chr3	+	265	1	Intergenic	novelGene_3251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCCAGTGACCACTCCT	NA	False	NA	NA	False	NA	NA	NA	21903811	21904076	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_21903800_21904100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105632	chr3	+	191	1	Intergenic	novelGene_3252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAAAATTTCAGAAATAAC	NA	False	NA	NA	False	NA	NA	NA	21976245	21976436	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_21976200_21976400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105640	chr3	+	6825	16	FSM	ENSMUSG00000027630.14	ENSMUST00000202747.4	4209	16	-74	-2542	1	0	multi-exon	TRUE	canonical	3	160	junction_1	26.4420540469575	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGCTGTGTACATATAT	NA	False	NA	17	True	AATAAA	-17	NA	22130816	22269457	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_22131119_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105648	chr3	-	177	1	Intergenic	novelGene_3253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTAAAAAAAAAGAATACT	NA	False	NA	NA	False	NA	NA	NA	22140929	22140752	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_22140800_22140900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105657	chr3	-	183	1	Intergenic	novelGene_3254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTTTAAAACATTTGGT	NA	False	NA	NA	False	NA	NA	NA	24217140	24216957	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_24217000_24217100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105660	chr3	+	547	1	FSM	ENSMUSG00000057036.8	ENSMUST00000077389.8	444	1	-27	-76	-27	76	mono-exon	FALSE	NA	NA	NA	NA	NA	1209	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTTAGTACCTATTTA	NA	False	NA	NA	False	NA	NA	NA	24387204	24387751	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_24387200_24387800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105672	chr3	-	1958	1	FSM	ENSMUSG00000069083.5	ENSMUST00000091289.5	1590	1	-126	-242	-126	242	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCATTCTTTAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-11	NA	25266895	25264937	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_25264900_25266900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105675	chr3	-	4107	25	FSM	ENSMUSG00000027699.20	ENSMUST00000108300.8	4086	25	-19	-2	-2	2	multi-exon	FALSE	canonical	3	272	junction_24	111.161098998506	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTGTCCTGTCATAA	1808	False	NA	NA	False	AATAAA	-22	NA	27208029	27151368	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207865
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105676	chr3	-	4121	25	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	581	junction_24	64.5165784034529	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTGTCCTGTCATAA	1808	False	NA	NA	False	AATAAA	-22	NA	27208029	27151368	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105727	chr3	-	179	1	Intergenic	novelGene_3255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATTTGTTTTAAAAGCT	1903	False	NA	-5	True	NA	NA	NA	27256819	27256640	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_27256600_27256800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105737	chr3	-	7221	26	NNC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	53521	6	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_25	16.7382675328123	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGTTCTTCAGCCTTGA	270	False	NA	-19	True	AATAAA	-24	NA	27711026	27470304	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27514093_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27710592
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105748	chr3	-	6989	26	NIC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	-19	1	combination_of_known_junctions	FALSE	canonical	3	63	junction_25	12.8644626782466	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGTAGGGTTCTTCAGC	NA	False	NA	-24	True	AATAAA	-19	NA	27765475	27470309	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27514093_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27765268
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105753	chr3	+	188	1	Intergenic	novelGene_3256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTGCTATACTGGGTAT	NA	False	NA	NA	False	NA	NA	NA	27703893	27704081	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_27703900_27704100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105775	chr3	+	486	4	FSM	ENSMUSG00000039221.11	ENSMUST00000194649.2	525	4	39	0	0	0	multi-exon	FALSE	canonical	3	3779	junction_1	1855.270390596	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGGTTCATCAGTGTGT	NA	False	NA	19	True	AATAAA	-24	NA	28859656	28861573	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_28859693_28860651_28860742_28860885_28861008_28861335
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105776	chr3	+	489	4	FSM	ENSMUSG00000039221.11	ENSMUST00000043867.11	552	4	72	-9	0	0	multi-exon	FALSE	canonical	3	2038	junction_1	2670.46824857864	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGGTTCATCAGTGTGT	NA	False	NA	19	True	AATAAA	-24	NA	28859656	28861573	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_28859693_28860648_28860742_28860885_28861008_28861335
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105784	chr3	+	552	4	FSM	ENSMUSG00000039221.11	ENSMUST00000193168.2	552	4	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_2	3246.42750659175	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTATGGTTCATCAGTGT	NA	False	NA	17	True	AATAAA	-22	NA	28859658	28861571	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_28859693_28860648_28860742_28860818_28861008_28861335
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105785	chr3	+	551	4	NIC	ENSMUSG00000039221.11	novel	552	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	450	junction_2	3086.0505864652	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGGTTCATCAGTGTGT	NA	False	NA	19	True	AATAAA	-24	NA	28859658	28861573	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_+_28859693_28860651_28860742_28860818_28861008_28861335
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105805	chr3	-	229	1	Intergenic	novelGene_3257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGGCAGAGAAAGGCAGG	NA	False	NA	NA	False	NA	NA	NA	29040602	29040373	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_29040400_29040600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105811	chr3	+	199	1	Intergenic	novelGene_3258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTGCTCCCTTTCTGC	4730	False	NA	NA	False	NA	NA	NA	29158952	29159151	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_29159000_29159200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105815	chr3	+	3491	8	FSM	ENSMUSG00000037730.14	ENSMUST00000195751.2	3474	8	-21	4	-8	-4	multi-exon	FALSE	canonical	3	56	junction_2	49.6608908662808	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTAAGACTCAACCCTT	8771	False	NA	NA	False	AATAAA	-31	NA	30656771	30672646	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_30656845_30657652_30657820_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105832	chr3	+	201	1	Intergenic	novelGene_3259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	217	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTCCTTAGATCCTCT	NA	False	NA	8	True	NA	NA	NA	30676588	30676789	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_30676600_30676800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105874	chr3	+	1358	9	NNC	ENSMUSG00000027706.9	novel	3967	8	NA	NA	-10	-288	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_8	221.180356270624	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTACTTATTATTTAGAC	NA	False	NA	12	True	AATAAA	-15	NA	30847474	30873893	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648_30873086_30873724
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105878	chr3	+	1367	9	NIC	ENSMUSG00000027706.9	novel	3967	8	NA	NA	-4	-288	combination_of_known_junctions	FALSE	canonical	3	39	junction_8	236.604495942068	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTACTTATTATTTAGAC	NA	False	NA	12	True	AATAAA	-15	NA	30847480	30873893	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648_30873086_30873709
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105888	chr3	+	1796	4	FSM	ENSMUSG00000037661.15	ENSMUST00000194979.6	346	4	-47	-1403	-4	3	multi-exon	FALSE	canonical	3	233	junction_2	25.3026129524645	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTTGTTTTTTGTTTT	NA	False	NA	37	True	AATAAA	-22	NA	30910094	30951344	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_30910207_30931383_30931482_30944090_30944191_30949858
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105904	chr3	+	2021	4	FSM	ENSMUSG00000037661.15	ENSMUST00000046748.13	1977	4	-39	-5	0	3	multi-exon	FALSE	canonical	3	100	junction_2	83.6341238171756	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTTGTTTTTTGTTTT	NA	False	NA	37	True	AATAAA	-22	NA	30910098	30951344	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_30910207_30931383_30931711_30944090_30944191_30949858
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105920	chr3	+	4726	18	FSM	ENSMUSG00000037643.15	ENSMUST00000108249.9	4708	18	-18	0	-18	0	multi-exon	FALSE	canonical	3	904	junction_14	67.823095759034	940	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTTCGTGGTGGCGCACG	NA	False	NA	NA	False	NA	NA	NA	31049877	31107108	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105937	chr3	+	191	1	Intergenic	novelGene_3260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATAACACTTTGACCTG	NA	False	NA	NA	False	NA	NA	NA	31088783	31088974	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_31088800_31089000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105944	chr3	-	204	1	Intergenic	novelGene_3261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCCCAATCAATGCACGAA	NA	False	NA	NA	False	NA	NA	NA	31110366	31110162	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_31110200_31110400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105955	chr3	-	172	1	Intergenic	novelGene_3262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTGGACCAATTGTGTG	NA	False	NA	-42	True	NA	NA	NA	31115131	31114959	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_31115000_31115100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105973	chr3	+	180	1	Intergenic	novelGene_3263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAGTACAGCACCAAAGA	NA	False	NA	NA	False	NA	NA	NA	31199576	31199756	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_31199600_31199800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105977	chr3	+	200	1	Intergenic	novelGene_3264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCCCGCCCCCCCCCTCA	NA	False	NA	NA	False	NA	NA	NA	31213799	31213999	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_31213800_31214000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105984	chr3	+	192	1	Intergenic	novelGene_3265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAGAATAAGAAAACATTG	NA	False	NA	NA	False	NA	NA	NA	32380453	32380645	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_32380500_32380600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000105991	chr3	-	2372	6	FSM	ENSMUSG00000027663.13	ENSMUST00000029199.11	7797	6	-6	5431	-6	-5427	multi-exon	FALSE	canonical	3	71	junction_5	21.7568380055559	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTGATGGAGTGTTATAT	NA	False	NA	-24	True	AATAAA	-23	NA	32419833	32394371	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_32395845_32397482_32397584_32397700_32397868_32399606_32399730_32415038_32415366_32419652
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106005	chr3	+	1830	7	FSM	ENSMUSG00000027667.14	ENSMUST00000193287.6	2211	7	291	90	15	0	multi-exon	FALSE	canonical	3	56	junction_1	65.8012580089131	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAAGCTGAAATACTTT	3197	False	NA	22	True	AATAAA	-22	NA	32564698	32574892	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_32564739_32567149_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106016	chr3	+	1944	7	FSM	ENSMUSG00000027667.14	ENSMUST00000191783.6	1988	7	44	0	44	0	multi-exon	FALSE	canonical	3	110	junction_1	46.6455309280059	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAAGCTGAAATACTTT	3226	False	NA	22	True	AATAAA	-22	NA	32564727	32574892	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_32564882_32567149_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106032	chr3	+	4540	18	FSM	ENSMUSG00000027668.14	ENSMUST00000091257.11	4562	18	14	8	14	-8	multi-exon	FALSE	canonical	3	429	junction_6	42.8432404539521	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATATAGCATTTATCTCA	NA	False	NA	NA	False	AATAAA	-21	NA	32583627	32633380	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_32583845_32586046_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622_32609691_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106038	chr3	-	2283	10	FSM	ENSMUSG00000027669.15	ENSMUST00000155737.8	5997	10	50	3664	-6	2	multi-exon	TRUE	canonical	3	60	junction_8	7.61253028131584	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTACTTTTCCATTTTTG	NA	False	NA	0	True	TATAAA	-18	NA	32670684	32638144	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_32639376_32641709_32641927_32643857_32644060_32644145_32644213_32645259_32645423_32647306_32647371_32650425_32650533_32652274_32652314_32656193_32656290_32670587
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106051	chr3	+	1846	14	FSM	ENSMUSG00000027671.15	ENSMUST00000029214.14	2010	14	169	-5	-89	5	multi-exon	FALSE	canonical	3	1234	junction_9	101.670310666418	243	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATTTGTCTGTGTGACT	NA	False	NA	28	True	AATAAA	-25	NA	32762824	32781127	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_32763030_32766016_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106065	chr3	-	904	7	FSM	ENSMUSG00000037531.9	ENSMUST00000043966.8	3364	7	362	2098	362	80	multi-exon	FALSE	canonical	3	685	junction_5	35.1931180141168	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGTTCTTCTAGCTCA	NA	False	NA	-9	True	TATAAA	-23	NA	32790934	32781643	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_32781867_32782580_32782677_32784229_32784361_32785308_32785406_32787737_32787799_32788256_32788409_32790790
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106078	chr3	+	1016	6	FSM	ENSMUSG00000027673.13	ENSMUST00000127477.8	1079	6	63	0	-18	0	multi-exon	FALSE	canonical	3	2813	junction_1	66.9226419084005	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTTGCTTTACTTTTGG	NA	False	NA	10	True	AATAAA	-24	NA	32791201	32805715	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_32791355_32799002_32799092_32800596_32800664_32801876_32801939_32802609_32802717_32805177
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106115	chr3	+	3067	15	ISM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	-19	3586	-9	-3578	5prime_fragment	FALSE	canonical	3	1060	junction_7	79.2243005391551	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTTTGCATTCTTTCCA	4840	False	NA	8	True	AATAAA	-17	NA	34074237	34119908	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106119	chr3	+	2688	16	FSM	ENSMUSG00000027680.16	ENSMUST00000200392.5	3014	16	-19	345	-9	-345	multi-exon	FALSE	canonical	3	506	junction_15	191.49767622611	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTTAACTTTCTACTT	4840	False	NA	15	True	AATAAA	-19	NA	34074237	34124126	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34123065
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106120	chr3	+	2775	17	FSM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	-19	-627	-9	-350	multi-exon	FALSE	canonical	3	754	junction_15	164.164884719601	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGATTTTTAACTTTC	4840	False	NA	10	True	AATAAA	-14	NA	34074237	34124121	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106144	chr3	+	2224	16	NIC	ENSMUSG00000027680.16	novel	2459	17	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	754	junction_14	169.31149465474	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATGTTATTTTGTTTTC	4846	False	NA	15	True	ATTAAA	-18	NA	34074243	34123489	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106175	chr3	-	600	6	FSM	ENSMUSG00000027679.14	ENSMUST00000108195.10	659	6	-12	71	-12	4	multi-exon	FALSE	canonical	3	3089	junction_3	262.703330774469	326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTCTTGGTATATTTT	NA	False	NA	0	True	NA	NA	NA	34135482	34131498	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_34131674_34132923_34132995_34133353_34133434_34134232_34134307_34134379_34134432_34135334
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106187	chr3	+	2536	1	FSM	ENSMUSG00000074637.8	ENSMUST00000099151.6	2057	1	-476	-3	-476	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2068	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGAGTCTTTCATTTCT	4131	False	NA	22	True	AATAAA	-27	NA	34704077	34706613	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_34704100_34706600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106192	chr3	-	2439	2	Antisense	novelGene_ENSMUSG00000074637.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	181	junction_1	0	337	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGGGGGCTGTCAGGGA	NA	False	NA	NA	False	AATAGA	-12	NA	34706613	34704141	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr3_-_34705642_34705674
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106202	chr3	+	233	1	Intergenic	novelGene_3266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTCTTGTCTTGTGTGT	221	False	NA	NA	False	NA	NA	NA	34758598	34758831	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_34758600_34758800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106207	chr3	-	258	1	Intergenic	novelGene_3267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTACCTACCATCTAAC	NA	False	NA	NA	False	ATTAAA	-35	NA	34766467	34766209	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_34766200_34766500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106214	chr3	+	4936	30	FSM	ENSMUSG00000037400.18	ENSMUST00000029257.15	4868	30	-67	-1	-39	1	multi-exon	FALSE	canonical	2	274	junction_18	53.5097310762941	498	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTGTTGCATGTTATCT	NA	False	NA	12	True	AATAAA	-18	NA	35808215	35910426	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106228	chr3	-	4386	7	FSM	ENSMUSG00000027708.15	ENSMUST00000108182.10	4980	7	596	-2	-40	2	multi-exon	FALSE	canonical	3	154	junction_3	19.8445346520284	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTATTGCTTCCATTT	NA	False	NA	2	True	TATAAA	-19	NA	35987025	35946251	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106241	chr3	-	2992	19	FSM	ENSMUSG00000027709.10	ENSMUST00000029259.10	2455	19	0	-537	0	16	multi-exon	FALSE	canonical	3	210	junction_8	26.6884748788316	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGCCGTGGCCTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	36054827	36013444	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106252	chr3	+	217	1	Intergenic	novelGene_3268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTCCCATCTTAACTGT	NA	False	NA	NA	False	NA	NA	NA	36110698	36110915	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_36110700_36110900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106256	chr3	+	3919	18	FSM	ENSMUSG00000027710.15	ENSMUST00000011492.15	3930	18	21	-10	21	10	multi-exon	FALSE	canonical	3	170	junction_2	13.4755962948483	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCAAGGAATTTGTTAAT	NA	False	NA	15	True	NA	NA	NA	36120148	36147012	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_36120420_36123858_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106313	chr3	+	2965	17	FSM	ENSMUSG00000027722.15	ENSMUST00000198968.2	2916	17	-49	0	-35	0	multi-exon	FALSE	canonical	3	83	junction_15	114.842266146876	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTTTATCTTGTGCTT	NA	False	NA	11	True	AATAAA	-20	NA	37474411	37633245	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37584131_37584169_37632900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106329	chr3	+	2938	17	NIC	ENSMUSG00000027722.15	novel	2916	17	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_15	130.436227233848	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTTTATCTTGTGCTT	NA	False	NA	11	True	AATAAA	-20	NA	37474435	37633245	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_+_37474650_37478662_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37584131_37584169_37632900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106335	chr3	+	2898	16	FSM	ENSMUSG00000027722.15	ENSMUST00000029277.13	2890	16	-8	0	-8	0	multi-exon	FALSE	canonical	3	115	junction_1	86.3305276249369	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTTTATCTTGTGCTT	NA	False	NA	11	True	AATAAA	-20	NA	37474438	37633245	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_37474650_37478662_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106365	chr3	+	521	1	FSM	ENSMUSG00000100755.2	ENSMUST00000116115.3	425	1	-30	-66	-30	66	mono-exon	FALSE	NA	NA	NA	NA	NA	2283	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGTGGAATAGGATTGTG	7634	False	NA	NA	False	AATAAA	-32	NA	37768858	37769379	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_37768900_37769400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106369	chr3	-	8107	5	NIC	ENSMUSG00000044864.17	novel	7031	4	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	7.49583217528247	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCTTGGTTTAATTTCG	NA	False	NA	NA	False	AATAAA	-19	NA	38539003	38503800	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_-_38506655_38508189_38511735_38517048_38517279_38536839_38538134_38538819
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106383	chr3	+	1141	2	ISM	ENSMUSG00000060798.8	ENSMUST00000091186.7	6387	16	14	50157	14	1	5prime_fragment	FALSE	canonical	3	119	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGCACTTGAGAACACC	NA	False	NA	2	True	AATAAA	-18	NA	40594929	40609047	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr3_+_40595159_40608135
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106413	chr3	+	201	1	Genic_Genomic	ENSMUSG00000025758.11	novel	NA	NA	NA	NA	-4503	22	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTACAATTTACTGATTT	NA	False	NA	NA	False	AAAAAG	-3	NA	40762669	40762870	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr3_+_40762700_40762900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106444	chr3	-	604	2	NNC	ENSMUSG00000097639.3	novel	2161	2	NA	NA	-1	-1439	at_least_one_novel_splicesite	FALSE	canonical	3	175	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTAGGACTCTTAACTGTG	NA	False	NA	NA	False	TTTAAA	-4	NA	41447628	41439897	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr3_-_41440396_41447522
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106472	chr3	+	5438	11	NIC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	226.907668446882	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTCTGTTGAAAT	NA	False	NA	13	True	AATAAA	-22	NA	41510166	41571293	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548237_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106478	chr3	+	3400	9	ISM	ENSMUSG00000025764.15	ENSMUST00000026865.15	5481	11	1	10093	1	76	5prime_fragment	FALSE	canonical	3	683	junction_7	60.6727904418447	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGTCGTCATTTTGCG	NA	False	NA	8	True	ATTAAA	-13	NA	41510166	41561206	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106502	chr3	-	3026	21	FSM	ENSMUSG00000059834.13	ENSMUST00000026866.15	3005	21	-18	-3	-18	3	multi-exon	FALSE	canonical	3	23	junction_17	7.74919350642375	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTCATGTATTTGAGTG	NA	False	NA	NA	False	AATAAA	-21	NA	41696967	41581151	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_41581670_41583952_41584049_41586087_41586167_41601879_41602077_41611638_41611832_41616006_41616153_41618386_41618462_41621545_41621618_41625819_41625919_41629762_41629941_41636130_41636223_41636716_41636808_41657820_41657892_41663903_41663970_41665517_41665641_41672163_41672300_41681527_41681584_41684725_41684799_41685295_41685355_41688602_41688671_41696429
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106514	chr3	+	192	1	Intergenic	novelGene_3269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGTGTGCATACCATAT	NA	False	NA	NA	False	NA	NA	NA	49395637	49395829	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_49395600_49395800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106522	chr3	+	2576	3	FSM	ENSMUSG00000023087.16	ENSMUST00000023849.15	3059	3	472	11	449	2	multi-exon	FALSE	canonical	3	120	junction_1	3.5	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGTCTCTTTGGTCTA	9618	False	NA	16	True	AATAAA	-25	NA	51132339	51159054	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_51132709_51155225_51155496_51157117
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106539	chr3	-	2939	7	FSM	ENSMUSG00000037174.19	ENSMUST00000108051.8	2514	7	10	-435	10	0	multi-exon	FALSE	canonical	3	154	junction_6	34.1987654098149	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTTTGGTCTCTG	NA	False	NA	-6	True	AATATA	-14	NA	51184925	51162650	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51184625
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106547	chr3	-	3399	10	FSM	ENSMUSG00000037174.19	ENSMUST00000062009.14	3353	10	-45	-1	-26	0	multi-exon	FALSE	canonical	3	55	junction_9	81.5267887503894	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTTTGGTCTCTG	NA	False	NA	-6	True	AATATA	-14	NA	51248110	51162650	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51215470_51215637_51230642_51230873_51233368_51233457_51247834
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106559	chr3	-	201	1	Intergenic	novelGene_3270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGACATCAACTTCCAGCG	NA	False	NA	NA	False	NA	NA	NA	51225777	51225576	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_51225600_51225800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106563	chr3	+	197	1	Intergenic	novelGene_3271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGGCAGGCAGATCTCT	NA	False	NA	NA	False	NA	NA	NA	51243626	51243823	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_51243600_51243800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106570	chr3	+	195	1	Intergenic	novelGene_3272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	996	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAGGGTCAGGGGGAAAG	NA	False	NA	NA	False	NA	NA	NA	51251813	51252008	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_51251800_51252000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106583	chr3	+	187	1	Intergenic	novelGene_3273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	347	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTCTCTCCTCTTAGAG	NA	False	NA	NA	False	NA	NA	NA	51262576	51262763	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_51262600_51262800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106586	chr3	+	158	1	Intergenic	novelGene_3274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAATTCAAGCCTTCTGGC	NA	False	NA	NA	False	NA	NA	NA	51265162	51265320	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_51265200_51265300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106599	chr3	+	199	1	Intergenic	novelGene_3275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	244	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTCACAGTTGGACTTA	NA	False	NA	NA	False	NA	NA	NA	51287984	51288183	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_51288000_51288200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106613	chr3	+	179	1	Intergenic	novelGene_3276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAAAAAAACCCAGATCTG	NA	False	NA	NA	False	NA	NA	NA	51299948	51300127	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_51299900_51300100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106619	chr3	+	195	1	Intergenic	novelGene_3277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTTAAAAAATACAATTTC	NA	False	NA	NA	False	NA	NA	NA	51300649	51300844	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_51300600_51300800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106627	chr3	-	454	4	FSM	ENSMUSG00000037152.12	ENSMUST00000038108.12	1249	4	22	773	-2	5	multi-exon	FALSE	canonical	3	5471	junction_1	421.328322755017	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGACTCTTACTTGTTTT	NA	False	NA	-4	True	NA	NA	NA	51316387	51312870	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_51313041_51314756_51314834_51315565_51315670_51316284
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106646	chr3	+	210	1	Intergenic	novelGene_3278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCCTGTATGTAGGCGG	NA	False	NA	NA	False	NA	NA	NA	51333217	51333427	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_51333200_51333400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106654	chr3	+	193	1	Intergenic	novelGene_3279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAATGTATAGCATATGG	NA	False	NA	NA	False	NA	NA	NA	51337754	51337947	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_51337800_51337900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106664	chr3	-	192	1	Intergenic	novelGene_3280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAATTAAAAATCCAT	NA	False	NA	NA	False	NA	NA	NA	51342059	51341867	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_51341900_51342100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106672	chr3	-	173	1	Antisense	novelGene_ENSMUSG00000063273.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAAAGAAACCCT	NA	False	NA	NA	False	NA	NA	NA	51348371	51348198	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr3_-_51348200_51348400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106693	chr3	+	187	1	Intergenic	novelGene_3281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAATATTTTTTAAATTAAA	NA	False	NA	8	True	NA	NA	NA	51482739	51482926	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_51482700_51482900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106702	chr3	+	211	1	Intergenic	novelGene_3282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	503	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGTTTTACATCTTAAAA	NA	False	NA	NA	False	AAAACA	-5	NA	51509819	51510030	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_51509800_51510000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106709	chr3	+	178	1	FSM	ENSMUSG00002076132.1	ENSMUST00020183798.1	117	1	105	-166	105	166	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAAAGACTGCCTGA	NA	False	NA	NA	False	NA	NA	NA	51736437	51736615	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_51736400_51736600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106714	chr3	+	200	1	Intergenic	novelGene_3283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTGGGTAAATAATCACG	NA	False	NA	NA	False	NA	NA	NA	51907317	51907517	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_51907300_51907500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106731	chr3	-	2940	19	FSM	ENSMUSG00000027742.14	ENSMUST00000036665.10	3182	19	-5	247	-5	0	multi-exon	TRUE	canonical	3	106	junction_7	14.5610676585896	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGTAGTATTTTTATA	NA	False	NA	-1	True	ATTAAA	-18	NA	52924663	52889542	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_52890613_52893821_52893902_52896530_52896585_52897379_52897488_52900175_52900344_52900860_52900993_52903428_52903547_52905677_52905770_52907901_52907967_52909666_52909759_52909833_52909963_52914666_52914761_52916473_52916545_52916893_52916977_52917996_52918109_52920326_52920386_52921235_52921308_52922889_52923034_52924466
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106739	chr3	-	5177	1	Intergenic	novelGene_3284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTGGCTACATTCTTT	NA	False	NA	NA	False	NA	NA	NA	53026128	53020951	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_53021000_53026100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106741	chr3	-	451	2	Antisense	novelGene_ENSMUSG00000048332.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	53026128	53020955	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr3_-_53021169_53025890
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106750	chr3	-	186	1	Intergenic	novelGene_3285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTAGTAAACTGGAATAA	NA	False	NA	NA	False	NA	NA	NA	53084223	53084037	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_53084000_53084200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106753	chr3	-	185	1	Intergenic	novelGene_3286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAAAGTTGGTTTGAAT	NA	False	NA	NA	False	NA	NA	NA	53221632	53221447	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_53221400_53221600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106783	chr3	-	1655	6	FSM	ENSMUSG00000027746.14	ENSMUST00000146598.8	4890	6	20	3215	20	1231	multi-exon	FALSE	canonical	3	324	junction_3	16.7737890770094	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTCTTCAGGAACAGTT	NA	False	NA	NA	False	AATAAA	-20	NA	53771231	53764011	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034_53771092_53771169
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106796	chr3	+	1529	1	FSM	ENSMUSG00000069014.5	ENSMUST00000091130.5	1488	1	-24	-17	-24	17	mono-exon	FALSE	NA	NA	NA	NA	NA	2504	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAACATGCTTAGTCAT	5416	False	NA	NA	False	NA	NA	NA	54388834	54390363	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_54388800_54390400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106798	chr3	-	3196	1	FSM	ENSMUSG00000104831.2	ENSMUST00000197444.2	1688	1	-59	-1449	-59	1449	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTTGTGCCCATGTGTT	NA	False	NA	NA	False	AATAAA	-26	NA	54542048	54538852	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_54538900_54542000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106806	chr3	+	2872	27	FSM	ENSMUSG00000027751.14	ENSMUST00000197502.5	2751	27	6	-127	6	0	multi-exon	FALSE	canonical	3	259	junction_20	89.4210256174979	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600233	54636184	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106820	chr3	+	3104	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	226	junction_20	93.1009504905751	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600238	54636184	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106827	chr3	+	2829	27	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	91	junction_23	119.269081933775	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600240	54636184	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106830	chr3	+	2868	27	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	198	junction_6	101.803856252742	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600240	54636184	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106860	chr3	+	3099	27	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	119.346079476414	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600278	54636184	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106872	chr3	+	3100	27	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	128.485425001709	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600280	54636184	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106873	chr3	+	2860	27	NIC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	116.599933013266	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600280	54636184	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106883	chr3	+	3031	26	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_22	121.131822408482	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600521	54636184	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr3_+_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629974_54630062_54633390_54633497_54634989_54635118_54635764
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106902	chr3	-	957	11	FSM	ENSMUSG00000027752.16	ENSMUST00000029316.16	1300	11	343	0	-4	0	multi-exon	FALSE	canonical	3	1645	junction_10	187.140588863026	296	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGTCCTTACGTTGTT	NA	False	NA	-12	True	AATAAA	-27	NA	54642471	54636098	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106929	chr3	-	2170	3	FSM	ENSMUSG00000036615.8	ENSMUST00000044373.6	2162	3	-8	0	-8	0	multi-exon	FALSE	canonical	3	271	junction_1	17.5	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTCTGCTGTACTTATTT	NA	False	NA	0	True	ATTAAA	-21	NA	54715220	54710535	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_54711997_54712780_54712889_54714619
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106950	chr3	+	4037	9	FSM	ENSMUSG00000036580.16	ENSMUST00000118118.8	3981	9	-56	0	2	0	multi-exon	TRUE	canonical	0	0	junction_4	69.2431178890726	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCTCAGATGTATTCAC	NA	False	NA	16	True	AATAAA	-17	NA	55019530	55044738	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_55019913_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106962	chr3	+	2370	11	FSM	ENSMUSG00000027794.5	ENSMUST00000029369.5	2364	11	-6	0	-6	0	multi-exon	FALSE	canonical	3	238	junction_8	29.6317397396778	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTGCAAGGAATCTGAT	NA	False	NA	20	True	AATAAA	-22	NA	55089442	55117378	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_55089536_55096541_55096757_55097730_55097793_55097874_55097980_55099659_55099757_55102493_55102605_55104147_55104296_55104418_55104508_55111754_55111877_55115013_55115271_55116307
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106966	chr3	+	183	1	Intergenic	novelGene_3287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGGCTGTAGGTTTGGG	NA	False	NA	NA	False	NA	NA	NA	55477704	55477887	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_55477700_55477900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000106974	chr3	-	4722	7	FSM	ENSMUSG00000027803.15	ENSMUST00000029380.14	4697	7	-19	-6	-19	6	multi-exon	TRUE	canonical	3	192	junction_3	19.06494747494	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTTTCTGTCGTCATT	NA	False	NA	0	True	AATAAA	-23	NA	57483268	57363063	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_57366532_57369939_57370053_57370863_57370986_57384777_57384978_57409152_57409290_57482243_57482679_57483021
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107007	chr3	+	182	1	Intergenic	novelGene_3288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAATTTAACTTTTATAG	9862	False	NA	NA	False	NA	NA	NA	57745954	57746136	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_57746000_57746100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107019	chr3	+	4667	3	FSM	ENSMUSG00000027806.10	ENSMUST00000199164.2	4659	3	-6	-2	-1	2	multi-exon	FALSE	canonical	3	95	junction_1	10.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCTCTATATGTGTTCA	NA	False	NA	20	True	ATTAAA	-20	NA	58322134	58369143	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_58325035_58366751_58366804_58367428
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107023	chr3	+	4734	4	FSM	ENSMUSG00000027806.10	ENSMUST00000099090.7	9799	4	2	5063	2	0	multi-exon	FALSE	canonical	3	31	junction_2	37.7447568102732	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGCTCTATATGTGTT	NA	False	NA	18	True	ATTAAA	-18	NA	58322137	58369141	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_58325035_58335648_58335721_58366751_58366804_58367428
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107036	chr3	-	2466	3	FSM	ENSMUSG00000027808.9	ENSMUST00000029385.9	4611	3	-7	2152	-7	-2152	multi-exon	FALSE	canonical	3	847	junction_1	36.5	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTGCAGAGTTTTTAT	NA	False	NA	18	True	AATAAA	-36	NA	58433320	58429389	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_58431290_58432503_58432580_58432830
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107049	chr3	+	1958	13	FSM	ENSMUSG00000027810.15	ENSMUST00000154219.8	1945	13	-13	0	0	0	multi-exon	TRUE	canonical	2	16	junction_3	220.750408958977	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCCTTCAAGTTTGTC	NA	False	NA	5	True	AATAAA	-16	NA	58433463	58464922	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_58433508_58438507_58438578_58444954_58445030_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107050	chr3	+	2081	14	NNC	ENSMUSG00000027810.15	novel	2299	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	216.693031319619	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCCTTCAAGTTTGTC	NA	False	NA	5	True	AATAAA	-16	NA	58433463	58464922	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr3_+_58433508_58438507_58438578_58444954_58445034_58446948_58447068_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107064	chr3	+	1851	1	Genic_Genomic	ENSMUSG00000075700.11	novel	NA	NA	NA	NA	14587	2	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGCTTTGTGAAAATGAT	NA	False	NA	17	True	AATAAA	-20	NA	58498705	58500556	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr3_+_58498700_58500600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107070	chr3	-	2509	2	FSM	ENSMUSG00000036432.9	ENSMUST00000070368.8	2511	2	-9	11	-9	-11	multi-exon	FALSE	canonical	3	158	junction_1	0	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATGCTTCATTTTCTGC	NA	False	NA	-11	True	AATAAA	-19	NA	58599830	58582369	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_58583865_58598816
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107088	chr3	-	198	1	Intergenic	novelGene_3289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCGTGGTGGCACACG	NA	False	NA	NA	False	NA	NA	NA	58954187	58953989	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_58954000_58954200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107108	chr3	-	5638	25	FSM	ENSMUSG00000027770.6	ENSMUST00000029336.6	5620	25	-18	0	-18	0	multi-exon	FALSE	canonical	3	420	junction_17	54.5870704827516	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTGTCATGTTTTAAC	NA	False	NA	0	True	NA	NA	NA	62414443	62375433	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107125	chr3	+	1680	1	Antisense	novelGene_ENSMUSG00000027770.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTTACCAGTTCCATTA	NA	False	NA	NA	False	NA	NA	NA	62385051	62386731	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr3_+_62385100_62386700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107131	chr3	+	5742	23	NIC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-68	2090	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	89.7851890084843	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTGCTTTGCATTT	NA	False	NA	19	True	NA	NA	NA	63148889	63291134	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_+_63148988_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107132	chr3	+	5821	24	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-68	2090	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_2	106.461509147939	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTGCTTTGCATTT	NA	False	NA	19	True	NA	NA	NA	63148889	63291134	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr3_+_63148988_63150636_63150716_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107154	chr3	+	5758	23	FSM	ENSMUSG00000027820.13	ENSMUST00000029400.7	3782	23	114	-2090	114	2090	multi-exon	FALSE	canonical	3	117	junction_1	72.8286793023574	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTGCTTTGCATTT	NA	False	NA	19	True	NA	NA	NA	63203629	63291134	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_63203744_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107163	chr3	-	1553	5	FSM	ENSMUSG00000048581.13	ENSMUST00000061706.7	1640	5	87	0	6	0	multi-exon	FALSE	canonical	3	41	junction_2	6.68487097856047	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTTTCTGAGATCACTC	NA	False	NA	NA	False	AATAAA	-15	NA	63836806	63822104	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_63823160_63827621_63827783_63832754_63832903_63834684_63834745_63836677
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107189	chr3	+	191	1	Intergenic	novelGene_3290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTAGCTCACATGTTTGC	NA	False	NA	NA	False	NA	NA	NA	63905277	63905468	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_63905300_63905500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107194	chr3	-	2954	5	FSM	ENSMUSG00000027828.13	ENSMUST00000029414.12	2957	5	3	0	3	0	multi-exon	FALSE	canonical	3	545	junction_4	56.4225132371822	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTTTCTGTAATTCT	2719	False	NA	-1	True	ATTAAA	-20	NA	65300041	65287075	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_65289456_65290412_65290545_65295152_65295252_65298745_65298873_65299825
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107239	chr3	-	5817	11	NIC	ENSMUSG00000027829.16	novel	2229	12	NA	NA	2	-4	intron_retention	FALSE	canonical	3	98	junction_8	37.3739213891184	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTGTTTCAAATATCTT	NA	False	NA	NA	False	AATAAA	-19	NA	65865600	65853575	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65862698_65864273_65864384_65864921_65864997_65865228
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107249	chr3	+	3235	10	FSM	ENSMUSG00000034544.18	ENSMUST00000065074.14	3224	10	-2	-9	0	8	multi-exon	FALSE	canonical	3	299	junction_4	31.3821526695165	247	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTCCTCCCTTCGTTTT	NA	False	NA	24	True	AATAAA	-24	NA	66893002	67265737	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_66893140_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107272	chr3	+	4067	18	FSM	ENSMUSG00000027774.17	ENSMUST00000077271.9	4078	18	11	0	-9	0	multi-exon	TRUE	canonical	0	0	junction_6	154.691388272057	421	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTTTCTTCCTGCTTCA	NA	False	NA	11	True	ATTAAA	-25	NA	67337439	67383862	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_67337656_67338982_67339136_67340687_67340821_67342837_67343043_67345878_67345996_67347434_67347586_67350887_67351043_67352105_67352191_67357011_67357150_67358631_67358734_67361002_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107283	chr3	-	1108	6	FSM	ENSMUSG00000047557.3	ENSMUST00000058981.3	1112	6	4	0	4	0	multi-exon	FALSE	canonical	3	160	junction_4	5.56417109729742	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGAGTCTAATTGCATTGTA	NA	False	NA	-3	True	AATAAA	-18	NA	67371255	67365330	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_67365661_67365926_67365990_67368254_67368392_67368644_67368823_67369691_67369755_67370918
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107308	chr3	+	2158	8	FSM	ENSMUSG00000027777.16	ENSMUST00000182719.8	2156	8	1	-3	1	2	multi-exon	FALSE	canonical	3	304	junction_1	72.6321455791344	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCTTTTGCTCACTAACA	NA	False	NA	24	True	AATAAA	-26	NA	68401541	68533799	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_68401703_68401906_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107354	chr3	+	181	1	Intergenic	novelGene_3291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGACCAGTTTTAGCA	NA	False	NA	NA	False	NA	NA	NA	68930242	68930423	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_68930200_68930400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107361	chr3	+	183	1	Intergenic	novelGene_3292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGTTGGAATTATATAT	NA	False	NA	NA	False	NA	NA	NA	68938000	68938183	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_68938000_68938200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107379	chr3	-	3289	3	NNC	ENSMUSG00000034317.15	novel	2939	3	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	293	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTGGTGACATAGTTTT	NA	False	NA	-10	True	AATAAA	-22	NA	68952087	68942624	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr3_-_68945342_68951100_68951176_68951590
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107393	chr3	-	3744	17	FSM	ENSMUSG00000027782.11	ENSMUST00000194558.6	3726	17	-18	0	3	0	multi-exon	FALSE	canonical	3	213	junction_6	26.0353575690829	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTGGTGTGTGGAT	NA	False	NA	-1	True	AATAAA	-33	NA	69034443	68979553	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_68981521_68984082_68984178_68986709_68986873_68988491_68988564_68991382_68991488_68993019_68993149_68994789_68994922_68997108_68997154_68997240_68997411_69000142_69000230_69001985_69002072_69002852_69002949_69008384_69008438_69008534_69008565_69008673_69008764_69009536_69009582_69034064
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107406	chr3	-	168	1	Intergenic	novelGene_3293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGGACAACTGTG	2112	False	NA	NA	False	NA	NA	NA	69287841	69287673	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_69287700_69287800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107414	chr3	-	195	1	Intergenic	novelGene_3294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCGTGATCTAGATATT	NA	False	NA	NA	False	NA	NA	NA	69556972	69556777	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_69556800_69557000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107421	chr3	-	188	1	Intergenic	novelGene_3295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGCCCTTCCCTATAAAA	NA	False	NA	NA	False	NA	NA	NA	69606423	69606235	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_69606200_69606400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107440	chr3	+	191	1	Intergenic	novelGene_3296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATTCAGTACCTCTGAA	NA	False	NA	NA	False	NA	NA	NA	71896886	71897077	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_71896900_71897100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107442	chr3	+	182	1	Intergenic	novelGene_3297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTGACATCAGGATTTT	NA	False	NA	NA	False	NA	NA	NA	72398651	72398833	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_72398700_72398800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107454	chr3	-	1903	8	FSM	ENSMUSG00000027835.12	ENSMUST00000161137.8	1927	8	26	-2	7	2	multi-exon	FALSE	canonical	3	1188	junction_3	125.646735098117	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGCTATAAGACAATTTA	NA	False	NA	-9	True	ATTAAA	-15	NA	75464137	75423794	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_75424909_75428008_75428092_75428337_75428417_75434894_75435022_75436116_75436235_75440847_75440902_75448466_75448686_75464028
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107462	chr3	-	933	3	FSM	ENSMUSG00000099370.2	ENSMUST00000190602.2	1026	3	98	-5	98	5	multi-exon	FALSE	canonical	3	42	junction_1	94	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGGTCATGGTGTTTCT	NA	False	NA	0	True	NA	NA	NA	75562940	75554747	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_75555246_75556106_75556298_75562696
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107495	chr3	+	199	1	Intergenic	novelGene_3298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCCAAGCTTCCTTCTG	NA	False	NA	NA	False	NA	NA	NA	76831800	76831999	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_76831800_76832000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107508	chr3	+	190	1	Intergenic	novelGene_3299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGTGTGTGTGGTGGTGG	968	False	NA	NA	False	NA	NA	NA	79238884	79239074	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_79238900_79239100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107515	chr3	+	196	1	Intergenic	novelGene_3300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTAGAGCTAATTGGACA	NA	False	NA	NA	False	NA	NA	NA	79320219	79320415	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_79320200_79320400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107520	chr3	+	181	1	Intergenic	novelGene_3301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGAGAGAGAGAGA	8	False	NA	NA	False	NA	NA	NA	79345350	79345531	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_79345400_79345500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107535	chr3	-	183	1	Intergenic	novelGene_3302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACCCCCGCCAAACTATC	NA	False	NA	NA	False	NA	NA	NA	79488614	79488431	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_79488400_79488600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107545	chr3	+	182	1	Intergenic	novelGene_3303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATGAACACAGAGT	NA	False	NA	NA	False	NA	NA	NA	79495461	79495643	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_79495500_79495600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107546	chr3	+	1944	10	FSM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	-22	-170	1	170	multi-exon	FALSE	canonical	3	2177	junction_5	219.851352699843	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGACAAATACTTCATG	NA	False	NA	NA	False	AATAAA	-31	NA	79498649	79511127	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_79498865_79500916_79501058_79502508_79502616_79504991_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107556	chr3	+	4118	9	FSM	ENSMUSG00000027804.14	ENSMUST00000161460.8	3777	9	31	-372	8	-2	multi-exon	FALSE	canonical	3	2177	junction_4	229.457478359281	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGGATGTCCTTTCC	NA	False	NA	27	True	AATAAA	-17	NA	79498679	79510955	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_79498865_79500916_79501058_79502508_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107610	chr3	-	205	1	Intergenic	novelGene_3304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGCAGGACTGTCGTAG	NA	False	NA	1	True	NA	NA	NA	82649615	82649410	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_82649400_82649600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107617	chr3	+	1567	10	FSM	ENSMUSG00000033860.14	ENSMUST00000048486.13	1695	10	133	-5	-4	5	multi-exon	FALSE	canonical	3	22	junction_4	1.8324913891634	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATTCCGTGGCTTTTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	82915163	82922361	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_82915290_82915459_82915505_82915680_82915865_82915954_82916049_82917370_82917502_82917762_82917897_82918651_82918837_82920070_82920349_82921444_82921615_82922141
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107641	chr3	+	208	1	Intergenic	novelGene_3305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1018	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAAACTGTGAGTTAGTG	NA	False	NA	NA	False	NA	NA	NA	83737583	83737791	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_83737600_83737800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107644	chr3	-	2905	3	FSM	ENSMUSG00000027995.11	ENSMUST00000029623.11	3014	3	109	0	109	0	multi-exon	FALSE	canonical	3	25	junction_2	5.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCGGTTTCTCTGTTTTTC	NA	False	NA	-1	True	TATAAA	-16	NA	83748965	83743578	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_83746097_83748195_83748444_83748826
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107666	chr3	-	884	8	FSM	ENSMUSG00000033752.8	ENSMUST00000047368.8	875	8	-9	0	-9	0	multi-exon	FALSE	canonical	3	187	junction_3	22.7497476998793	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTCTCCTCTTTTTGG	NA	False	NA	NA	False	AATAAA	-15	NA	84063102	83995239	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_83995482_84000861_84000907_84012241_84012357_84023733_84023809_84041324_84041474_84045475_84045534_84049005_84049072_84062968
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107675	chr3	+	181	1	Intergenic	novelGene_3306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCACACATATGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	84004350	84004531	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_84004400_84004500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107686	chr3	-	2952	8	FSM	ENSMUSG00000074513.10	ENSMUST00000098990.10	2799	8	-153	0	-62	0	multi-exon	FALSE	canonical	3	164	junction_6	7.88954358370519	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTGCCCTGTCCTTAT	NA	False	NA	-3	True	ATTAAA	-16	NA	84489994	84403399	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84441893_84442003_84455240_84455343_84489720
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107700	chr3	+	5145	14	FSM	ENSMUSG00000028086.16	ENSMUST00000107679.8	4473	14	-672	0	-672	0	multi-exon	FALSE	canonical	3	30	junction_3	22.7195403737157	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGCCTGTTTCTTCCACT	NA	False	NA	25	True	AATAAA	-19	NA	84721902	84886505	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_84723077_84771270_84771319_84771443_84771508_84810807_84811387_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107704	chr3	+	5077	13	NIC	ENSMUSG00000028086.16	novel	4473	14	NA	NA	-668	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	21.8649580125115	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGCCTGTTTCTTCCACT	NA	False	NA	25	True	AATAAA	-19	NA	84721906	84886505	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_+_84723077_84771270_84771319_84810807_84811387_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107717	chr3	+	2016	13	FSM	ENSMUSG00000028085.13	ENSMUST00000127348.8	3469	13	-5	1458	-5	6	multi-exon	FALSE	canonical	3	140	junction_6	19.0283049399806	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCGTGGGTGCTTTGTA	NA	False	NA	15	True	AATAAA	-19	NA	85481420	85561471	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_85481627_85483170_85483322_85509166_85509281_85511687_85511887_85512321_85512445_85518658_85518773_85520769_85520855_85523921_85523967_85526130_85526321_85544230_85544365_85552276_85552356_85559587_85559723_85561030
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107732	chr3	+	155	1	Intergenic	novelGene_3307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTCAGTTGTGGTG	NA	False	NA	NA	False	AATAAA	-28	NA	85844718	85844873	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_85844700_85844900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107746	chr3	+	215	1	Intergenic	novelGene_3308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTTAGAACTAGGAGACT	NA	False	NA	NA	False	NA	NA	NA	85937226	85937441	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_85937200_85937400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107756	chr3	+	202	1	Intergenic	novelGene_3309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	326	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTGCTGGTCTTACAGA	7337	False	NA	NA	False	NA	NA	NA	86024575	86024777	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_86024600_86024800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107760	chr3	-	966	6	FSM	ENSMUSG00000028081.7	ENSMUST00000029722.7	977	6	12	-1	12	1	multi-exon	FALSE	canonical	3	3673	junction_2	2509.92074775281	2065	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGTCCATTGATTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	86049997	86045245	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_86045418_86045789_86045900_86046346_86046556_86048545_86048734_86049004_86049109_86049814
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107771	chr3	+	185	1	Intergenic	novelGene_3310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGAGGCCTCCCTTTCT	4617	False	NA	NA	False	NA	NA	NA	86108825	86109010	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_86108800_86109000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107772	chr3	-	195	1	Intergenic	novelGene_3311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAAATGCCATCTTG	NA	False	NA	NA	False	NA	NA	NA	86124155	86123960	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_86124000_86124200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107780	chr3	+	198	1	Intergenic	novelGene_3312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTGGCTGCTCTTCCA	4716	False	NA	NA	False	NA	NA	NA	86229407	86229605	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_86229400_86229600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107822	chr3	+	179	1	Intergenic	novelGene_3313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGGGGGGCAGGGGTAA	NA	False	NA	5	True	NA	NA	NA	87398828	87399007	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_87398800_87399000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107831	chr3	+	5131	5	FSM	ENSMUSG00000003382.19	ENSMUST00000170036.8	5127	5	10	-14	10	0	multi-exon	FALSE	canonical	3	20	junction_1	10.2072278312968	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAATGTTTGCTGAGTAT	NA	False	NA	NA	False	ATTAAA	-24	NA	87432894	87447463	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_87432967_87434564_87434624_87435176_87435415_87436530_87436647_87442817
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107843	chr3	+	184	1	Intergenic	novelGene_3314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTAAGTAAAAAGGCATG	NA	False	NA	NA	False	NA	NA	NA	87565901	87566085	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_87565900_87566100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107866	chr3	+	196	1	Intergenic	novelGene_3315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACTGACTGTTTTTATG	NA	False	NA	NA	False	NA	NA	NA	87786764	87786960	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_87786800_87787000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107894	chr3	+	963	6	FSM	ENSMUSG00000019710.14	ENSMUST00000019854.13	1226	6	25	238	-5	-228	multi-exon	FALSE	canonical	3	263	junction_1	297.101329515706	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTTGTCCACACTACCCC	NA	False	NA	37	True	AATAAA	-15	NA	87826837	87830741	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_87827013_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107901	chr3	+	1315	6	FSM	ENSMUSG00000019710.14	ENSMUST00000119968.8	1339	6	29	-5	-1	5	multi-exon	FALSE	canonical	3	595	junction_1	165.189103756876	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGTCTTAAAAGCTTTA	NA	False	NA	21	True	AATAAA	-23	NA	87826841	87830974	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107926	chr3	-	1739	8	FSM	ENSMUSG00000004896.17	ENSMUST00000005016.16	2492	8	0	753	0	0	multi-exon	FALSE	canonical	3	36	junction_2	29.6922995583236	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGTAATTTTTATTTC	9443	False	NA	-22	True	TATAAA	-27	NA	87837451	87830964	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_87831220_87831650_87831836_87832253_87832739_87834037_87834182_87834361_87834425_87834869_87835063_87835230_87835356_87837162
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107951	chr3	+	902	4	FSM	ENSMUSG00000004885.6	ENSMUST00000005019.6	931	4	29	0	29	0	multi-exon	FALSE	canonical	3	31	junction_1	3.29983164553722	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTGTGGCTCCCTGAG	8860	False	NA	8	True	ATTAAA	-19	NA	87856001	87860683	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_87856218_87859421_87859601_87859784_87859902_87860293
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107956	chr3	+	6141	4	FSM	ENSMUSG00000004891.17	ENSMUST00000090973.12	6126	4	-15	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	1.4142135623731	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGCTGCTTTCTTCTA	NA	False	NA	10	True	AATAAA	-20	NA	87878384	87887758	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_87879296_87880298_87880424_87882108_87882183_87882727
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107968	chr3	+	1637	8	FSM	ENSMUSG00000028069.17	ENSMUST00000029707.13	1630	8	-4	-3	-4	0	multi-exon	FALSE	canonical	3	156	junction_1	22.2417148068898	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTGTTTTGTTTTTGA	1715	False	NA	39	True	TTTAAA	-28	NA	87950410	87963300	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_87950487_87958468_87958597_87958979_87959054_87959151_87959245_87959338_87959426_87961675_87961768_87962009_87962061_87962264
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107979	chr3	-	962	6	FSM	ENSMUSG00000028070.8	ENSMUST00000029708.8	908	6	-54	0	-54	0	multi-exon	TRUE	canonical	3	839	junction_3	34.2963554915096	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTCTTCTGGCCTTAA	NA	False	NA	-4	True	AATAAA	-25	NA	87965856	87963826	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_87964084_87964292_87964441_87965030_87965145_87965227_87965339_87965436_87965546_87965633
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107980	chr3	-	1525	5	NIC	ENSMUSG00000028070.8	novel	908	6	NA	NA	-27	0	intron_retention	FALSE	canonical	3	839	junction_2	37.6920084368026	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTCTTCTGGCCTTAA	NA	False	NA	-4	True	AATAAA	-25	NA	87965829	87963826	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_-_87964084_87964292_87965145_87965227_87965339_87965436_87965546_87965633
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000107993	chr3	+	5731	38	FSM	ENSMUSG00000028068.15	ENSMUST00000071812.11	5756	38	25	0	-24	0	multi-exon	FALSE	canonical	3	183	junction_11	23.9826757536325	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGCGTTGTTGCTATAG	NA	False	NA	19	True	AATAAA	-20	NA	87989302	88028355	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_87989400_87991237_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108002	chr3	+	182	1	Intergenic	novelGene_3316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTAAATGCTGGTGTT	1992	False	NA	NA	False	NA	NA	NA	88032870	88033052	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_88032900_88033100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108007	chr3	+	202	1	Intergenic	novelGene_3317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCTTGGGGGGCTGGAA	7031	False	NA	NA	False	NA	NA	NA	88037909	88038111	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_88037900_88038100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108028	chr3	+	189	1	Intergenic	novelGene_3318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATAAAATATTTTTTAA	9058	False	NA	NA	False	NA	NA	NA	88179388	88179577	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_88179400_88179600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108033	chr3	+	200	1	Intergenic	novelGene_3319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAGAAAAGTCGGCCAGG	NA	False	NA	NA	False	NA	NA	NA	88186374	88186574	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_88186400_88186600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108049	chr3	+	2032	14	FSM	ENSMUSG00000001416.14	ENSMUST00000001452.14	1977	14	-48	-7	-48	7	multi-exon	FALSE	canonical	3	2266	junction_3	121.304155843285	3071	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGTGTTTTTCAACCTT	3756	False	NA	30	True	ATTAAA	-22	NA	88204374	88229081	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_88204574_88206648_88206711_88208106_88208158_88208235_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320_88228453_88228750
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108061	chr3	+	1573	6	FSM	ENSMUSG00000001418.14	ENSMUST00000177005.8	4219	6	13	2633	13	99	multi-exon	FALSE	canonical	3	936	junction_4	66.9489357645064	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGAGTCTTTTGTTTGT	4008	False	NA	16	True	TTTAAA	-26	NA	88232342	88235987	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_88232509_88232983_88233239_88233421_88233620_88233717_88233937_88235163_88235421_88235509
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108070	chr3	+	1695	5	NIC	ENSMUSG00000001418.14	novel	4219	6	NA	NA	-7	50	intron_retention	FALSE	canonical	3	936	junction_3	74.2596795037522	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCAGTCTCTCTTATTTT	4020	False	NA	16	True	AATAGA	-19	NA	88232354	88235938	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_+_88232509_88232983_88233620_88233717_88233937_88235163_88235421_88235509
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108079	chr3	+	4460	22	FSM	ENSMUSG00000001415.11	ENSMUST00000001451.11	4448	22	-12	0	-12	0	multi-exon	FALSE	canonical	3	253	junction_5	44.0686436309756	223	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88243554	88269645	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108101	chr3	-	2053	6	FSM	ENSMUSG00000074489.10	ENSMUST00000107542.2	2051	6	0	-2	0	0	multi-exon	TRUE	canonical	3	20	junction_5	10.571660229122	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGGGCTGGAGTCTGTC	7128	False	NA	NA	False	AATAAA	-15	NA	88280050	88275926	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_88276196_88276401_88276460_88276602_88276636_88276779_88276916_88277434_88278787_88279845
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108102	chr3	-	688	5	NNC	ENSMUSG00000074489.10	novel	2051	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	6.26498204307083	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGGGCTGGAGTCTGTC	7128	False	NA	NA	False	AATAAA	-15	NA	88280050	88275926	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr3_-_88276196_88276401_88276460_88276602_88276636_88276779_88276916_88279858
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108103	chr3	-	701	5	NIC	ENSMUSG00000074489.10	novel	2051	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_3	35.14612354158	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGGGCTGGAGTCTGTC	7128	False	NA	NA	False	AATAAA	-15	NA	88280050	88275926	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_-_88276196_88276401_88276460_88276602_88276636_88276779_88276916_88279845
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108113	chr3	-	1086	5	FSM	ENSMUSG00000028066.16	ENSMUST00000056370.13	1007	5	-74	-5	-74	5	multi-exon	FALSE	canonical	0	0	junction_1	377.05205210952	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGAGGAGGTTTCCTTG	NA	False	NA	-1	True	AATAAA	-21	NA	88317712	88301444	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_88301878_88303211_88303408_88306441_88306543_88307017_88307124_88317462
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108125	chr3	-	3553	4	FSM	ENSMUSG00000050144.14	ENSMUST00000057935.9	3577	4	28	-4	1	3	multi-exon	FALSE	canonical	3	53	junction_3	3.85861230093008	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTTTTGGGTTTTGT	4094	False	NA	0	True	ATTAAA	-22	NA	88332418	88317801	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_88320205_88323294_88323423_88327807_88328446_88332034
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108139	chr3	+	180	1	Intergenic	novelGene_3320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAACAACAGAGTTGGGC	4021	False	NA	NA	False	NA	NA	NA	88330449	88330629	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_88330400_88330600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108147	chr3	+	212	1	Intergenic	novelGene_3321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCTCACGCAGGAGACAG	648	False	NA	NA	False	NA	NA	NA	88340927	88341139	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_88340900_88341100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108162	chr3	-	2026	10	FSM	ENSMUSG00000028063.16	ENSMUST00000120377.8	2021	10	-5	0	-5	0	multi-exon	FALSE	canonical	3	100	junction_5	22.6377811589932	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGCCCTGGCCTTTCT	NA	False	NA	-1	True	ATTAAA	-19	NA	88410619	88390511	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108184	chr3	-	591	4	FSM	ENSMUSG00000028062.16	ENSMUST00000029698.15	668	4	77	0	-54	0	multi-exon	FALSE	canonical	3	2467	junction_3	160.918889161244	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTCACCTGCTTTC	1054	False	NA	-6	True	AATAAA	-14	NA	88460254	88457125	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_88457312_88458002_88458093_88459661_88459825_88460102
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108189	chr3	+	3390	11	FSM	ENSMUSG00000008604.12	ENSMUST00000008748.8	3330	11	-58	-2	-58	2	multi-exon	FALSE	canonical	3	1295	junction_8	115.436605979213	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGGTTTGTTTGTTGTT	6047	False	NA	NA	False	AATAAA	-28	NA	88461006	88477034	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108202	chr3	+	4376	10	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-10	0	intron_retention	FALSE	canonical	3	1295	junction_7	121.63312576741	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGGTTTGTTTGTTG	6095	False	NA	NA	False	AATAAA	-26	NA	88461054	88477032	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108219	chr3	+	3245	11	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	406.990417577613	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGGTTTGTTTGTTG	6126	False	NA	NA	False	AATAAA	-26	NA	88461085	88477032	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_+_88461220_88462708_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108245	chr3	+	2162	6	FSM	ENSMUSG00000041355.14	ENSMUST00000195014.6	1059	6	-1101	-2	-1101	2	multi-exon	FALSE	canonical	3	3697	junction_1	473.044775893361	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTGTCTTGCGTCAACA	2456	False	NA	17	True	AATAAA	-19	NA	88485813	88495728	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_88486994_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108256	chr3	+	1172	5	FSM	ENSMUSG00000041355.14	ENSMUST00000035785.9	1189	5	18	-1	18	1	multi-exon	FALSE	canonical	3	4285	junction_2	286.022180083993	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTCTTGCGTCAAC	3638	False	NA	16	True	AATAAA	-18	NA	88486995	88495727	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108263	chr3	-	177	1	Intergenic	novelGene_3322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAAAAGAAGAGG	8644	False	NA	NA	False	NA	NA	NA	88502472	88502295	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_88502300_88502500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108265	chr3	+	4282	24	NNC	ENSMUSG00000028059.17	novel	3065	22	NA	NA	-32	0	intron_retention	FALSE	canonical	3	13	junction_1	80.4191759242328	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	8586	False	NA	15	True	ATTAAA	-17	NA	88522641	88555359	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr3_+_88522706_88522788_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108276	chr3	+	4277	23	NIC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	56	0	intron_retention	FALSE	canonical	3	134	junction_1	52.3518768361218	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	8674	False	NA	15	True	ATTAAA	-17	NA	88522729	88555359	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_+_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108289	chr3	+	4413	23	FSM	ENSMUSG00000028059.17	ENSMUST00000176500.8	4492	23	79	0	79	0	multi-exon	FALSE	canonical	3	97	junction_1	58.4462916553691	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	9473	False	NA	15	True	ATTAAA	-17	NA	88523528	88555359	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108297	chr3	+	4296	22	FSM	ENSMUSG00000028059.17	ENSMUST00000029694.14	4300	22	4	0	4	0	multi-exon	FALSE	canonical	3	163	junction_1	44.2621032808889	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	NA	False	NA	15	True	ATTAAA	-17	NA	88528416	88555359	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108312	chr3	+	192	1	Intergenic	novelGene_3323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGACACAGGAACCAGATG	1671	False	NA	NA	False	NA	NA	NA	88588565	88588757	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_88588600_88588800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108319	chr3	+	248	1	Intergenic	novelGene_3324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTGTTAGGAACTAAACT	3507	False	NA	NA	False	NA	NA	NA	88590401	88590649	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_88590400_88590600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108325	chr3	+	3005	14	FSM	ENSMUSG00000028060.15	ENSMUST00000029696.11	2981	14	-12	-12	-12	12	multi-exon	FALSE	canonical	3	322	junction_11	33.2047619027415	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGTTGTTTTTTTGCAT	-4	True	NA	28	True	AATAAA	-28	NA	88593097	88620243	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617136_88617250_88618067_88618160_88618936
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108374	chr3	-	237	1	Intergenic	novelGene_3325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTAAGAAGCCTGGTAAA	7672	False	NA	NA	False	TTTAAA	-5	NA	88599662	88599425	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_88599400_88599700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108381	chr3	-	204	1	Intergenic	novelGene_3326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGGATTCAGTCGCTA	NA	False	NA	NA	False	NA	NA	NA	88623191	88622987	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_88623000_88623200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108386	chr3	+	1105	6	FSM	ENSMUSG00000028057.15	ENSMUST00000029692.15	1204	6	37	62	-1	-62	multi-exon	FALSE	canonical	3	56	junction_4	6.67532770731145	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGTGTACCGTGTGCA	2254	False	NA	12	True	NA	NA	NA	88624181	88636972	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_88624265_88624632_88624778_88624908_88624966_88633301_88633376_88633586_88633779_88636418
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108390	chr3	+	6579	19	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	-6	392	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	100.330149451144	21	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGGTCTGGTTTTGTTT	NA	False	NA	15	True	AATATA	-16	NA	88682516	88733286	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr3_+_88682582_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696706_88702770_88702795_88706921_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108417	chr3	+	190	1	Intergenic	novelGene_3327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGTTTCTGCATGTAAA	NA	False	NA	11	True	NA	NA	NA	88801214	88801404	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_88801200_88801400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108423	chr3	-	168	1	Intergenic	novelGene_3328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTTTTTTTTTTAAAA	NA	False	NA	0	True	NA	NA	NA	88812304	88812136	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_88812100_88812300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108430	chr3	-	1826	14	FSM	ENSMUSG00000068922.15	ENSMUST00000126245.2	1875	14	49	0	-19	0	multi-exon	FALSE	canonical	3	676	junction_13	37.3331396162909	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATACGCATTTGTACATTTA	NA	False	NA	-7	True	AATAAA	-44	NA	88821257	88816921	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88819608_88820009_88820086_88820164_88820235_88820873_88821010_88821099
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108437	chr3	-	1782	14	NNC	ENSMUSG00000068922.15	novel	1875	14	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	3	215	junction_1	142.181149559078	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAGGGACCTGTTACAT	NA	False	NA	-29	True	AATAAA	-22	NA	88821238	88816943	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr3_-_88817215_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88819608_88820009_88820086_88820164_88820235_88820873_88821010_88821099
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108468	chr3	-	187	1	Intergenic	novelGene_3329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTTAAATGATATTGAA	NA	False	NA	NA	False	NA	NA	NA	88854248	88854061	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_88854100_88854200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108474	chr3	+	239	1	Intergenic	novelGene_3330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGCAGGTCTTAGGAGAA	NA	False	NA	NA	False	AAAAAG	-16	NA	88940932	88941171	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_88940900_88941200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108480	chr3	+	189	1	Intergenic	novelGene_3331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATGTGCTTATTTT	8712	False	NA	NA	False	NA	NA	NA	88993609	88993798	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_88993600_88993800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108483	chr3	-	1218	10	FSM	ENSMUSG00000059743.13	ENSMUST00000081848.13	1237	10	22	-3	22	3	multi-exon	FALSE	canonical	3	1662	junction_9	235.997175124336	242	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTTATTCTTGTGGC	NA	False	NA	0	True	AATAAA	-17	NA	89009244	89000891	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975_89008139_89009168
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108511	chr3	-	191	1	Intergenic	novelGene_3332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTAAGAGTATAATT	NA	False	NA	NA	False	NA	NA	NA	89029438	89029247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_89029200_89029400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108518	chr3	-	239	1	Intergenic	novelGene_3333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATATTTTTTTGAGA	NA	False	NA	NA	False	NA	NA	NA	89034611	89034372	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_89034400_89034600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108553	chr3	+	2049	12	FSM	ENSMUSG00000068917.13	ENSMUST00000128318.8	1885	12	-164	0	-2	0	multi-exon	FALSE	canonical	3	39	junction_3	144.088987655672	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCCAATCCCTGGAAT	NA	False	NA	18	True	AATAAA	-19	NA	89072121	89084228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_89072414_89074341_89074512_89076001_89076231_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108556	chr3	+	2131	13	FSM	ENSMUSG00000068917.13	ENSMUST00000090927.12	2128	13	-3	0	-2	0	multi-exon	FALSE	canonical	3	115	junction_2	141.611043001596	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCCAATCCCTGGAAT	NA	False	NA	18	True	AATAAA	-19	NA	89072121	89084228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_89072414_89074341_89074512_89076004_89076231_89076924_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108559	chr3	+	3174	11	FSM	ENSMUSG00000068917.13	ENSMUST00000138822.8	3168	11	-4	-2	-2	0	multi-exon	FALSE	canonical	3	370	junction_2	65.9302661908778	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCCAATCCCTGGAAT	NA	False	NA	18	True	AATAAA	-19	NA	89072121	89084228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_89072414_89074341_89074512_89076001_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108569	chr3	+	2134	13	FSM	ENSMUSG00000068917.13	ENSMUST00000121212.9	2154	13	20	0	-2	0	multi-exon	FALSE	canonical	3	173	junction_3	106.020045274467	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCCAATCCCTGGAAT	NA	False	NA	18	True	AATAAA	-19	NA	89072121	89084228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_89072414_89074341_89074512_89076001_89076231_89076924_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108611	chr3	+	1489	9	FSM	ENSMUSG00000028049.16	ENSMUST00000029684.15	1489	9	4	-4	4	4	multi-exon	TRUE	canonical	3	743	junction_2	141.598022585063	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTTCCTGTATCTTTAC	NA	False	NA	22	True	ATTAAA	-26	NA	89084783	89090076	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_89084965_89085296_89085375_89086401_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108627	chr3	-	189	1	Intergenic	novelGene_3334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATATTTATTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	89109917	89109728	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_89109700_89109900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108633	chr3	+	5743	11	FSM	ENSMUSG00000105692.2_ENSMUSG00000028048.12	ENSMUST00000077367.11	1779	11	-6	-3958	-6	-527	multi-exon	FALSE	canonical	3	268	junction_1	28.1177879642051	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACTGGATTTCCTCCATT	NA	False	NA	NA	False	AATAAA	-15	NA	89110228	89119944	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_89110394_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108652	chr3	-	1113	8	FSM	ENSMUSG00000064068.16	ENSMUST00000239452.2	1522	8	409	0	-14	0	multi-exon	FALSE	canonical	3	739	junction_1	39.053077434984	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGAATCCCTTCTTTCT	NA	False	NA	-16	True	AATAAA	-21	NA	89121233	89116387	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_89116729_89116811_89116967_89117413_89117491_89117572_89117756_89117890_89117984_89119989_89120070_89120183_89120254_89121119
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108662	chr3	-	1540	7	NIC	ENSMUSG00000064068.16	novel	775	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	739	junction_1	41.4286535302963	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGATCAAAGAATCCCTT	NA	False	NA	-22	True	AATAAA	-15	NA	89121219	89116393	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_-_89116729_89116811_89117491_89117572_89117756_89117890_89117984_89119989_89120070_89120183_89120254_89121119
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108666	chr3	+	576	5	FSM	ENSMUSG00000042747.13	ENSMUST00000040888.12	1172	5	418	178	-50	6	multi-exon	FALSE	canonical	3	1428	junction_1	178.055293378209	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGAACTGTGACAGTT	7541	False	NA	26	True	AATAAA	-20	NA	89153690	89157035	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_89153823_89154084_89154240_89154371_89154436_89156380_89156448_89156877
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108682	chr3	+	389	2	FSM	ENSMUSG00000042737.10	ENSMUST00000040824.2	404	2	17	-2	17	0	multi-exon	FALSE	canonical	3	539	junction_1	0	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTAGTTTTGAGTAT	6794	False	NA	19	True	ATTAAA	-20	NA	89173875	89174386	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_89173914_89174035
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108691	chr3	-	993	6	FSM	ENSMUSG00000027953.14	ENSMUST00000029565.11	1022	6	30	-1	-14	1	multi-exon	FALSE	canonical	3	127	junction_5	11.5481600266016	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGAGTGATGTGTTCTT	NA	False	NA	-30	True	AATAAA	-18	NA	89177847	89175551	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_89175906_89175979_89176100_89176356_89176519_89177133_89177258_89177368_89177447_89177692
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108701	chr3	-	2335	5	FSM	ENSMUSG00000028039.12	ENSMUST00000029673.10	2363	5	28	0	28	0	multi-exon	FALSE	canonical	3	176	junction_1	13.4047566184545	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAATGTCTCTTAACTGT	9217	False	NA	NA	False	NA	NA	NA	89230244	89221205	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_89222875_89223114_89223193_89223376_89223443_89223769_89224060_89230012
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108744	chr3	-	2000	8	NIC	ENSMUSG00000042642.14	novel	2238	8	NA	NA	2	-415	combination_of_known_junctions	FALSE	canonical	2	9	junction_7	114.072300739129	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGGTGCCTGTTGCTCT	3746	False	NA	-15	True	AGTAAA	-18	NA	89319168	89310388	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89318867
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108752	chr3	-	1819	8	FSM	ENSMUSG00000042642.14	ENSMUST00000107426.8	2238	8	4	415	-2	-415	multi-exon	FALSE	canonical	3	53	junction_7	99.0019583397321	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGGTGCCTGTTGCTCT	3742	False	NA	-15	True	AGTAAA	-18	NA	89319172	89310388	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319052
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108770	chr3	-	779	3	FSM	ENSMUSG00000028044.7	ENSMUST00000029679.4	849	3	70	0	70	0	multi-exon	FALSE	canonical	3	2335	junction_2	153.5	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGTGGTTATAAGACTGT	NA	False	NA	-12	True	ATTAAA	-22	NA	89325620	89322778	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_89323271_89323580_89323709_89325461
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108788	chr3	+	2975	12	NIC	ENSMUSG00000042626.14	novel	3250	13	NA	NA	-1	0	combination_of_known_junctions	TRUE	canonical	3	123	junction_1	129.584906273394	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGCCTCTCAACTCCTC	NA	False	NA	20	True	ATTAAA	-17	NA	89325856	89337322	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_+_89326017_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108799	chr3	+	3554	12	FSM	ENSMUSG00000042626.14	ENSMUST00000094378.10	2617	12	-7	-930	-7	2	multi-exon	FALSE	canonical	3	501	junction_1	37.6308735565373	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTCTGGAAAGTCTGATT	NA	False	NA	34	True	ATTAAA	-31	NA	89328927	89337336	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108802	chr3	+	3109	13	NIC	ENSMUSG00000042626.14	novel	2617	12	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	152.973558898988	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGCCTCTCAACTCCTC	NA	False	NA	20	True	ATTAAA	-17	NA	89328929	89337322	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_+_89329056_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108813	chr3	+	3049	3	FSM	ENSMUSG00000047824.14	ENSMUST00000060061.11	3198	3	152	-3	-11	3	multi-exon	FALSE	canonical	3	239	junction_1	12.5	261	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGACTCCTTTGTTCATC	NA	False	NA	NA	False	AATAAA	-19	NA	89337719	89342438	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_89338037_89338433_89338484_89339756
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108837	chr3	+	1169	5	FSM	ENSMUSG00000027952.17	ENSMUST00000029564.12	1194	5	28	-3	28	3	multi-exon	FALSE	canonical	3	519	junction_1	43.1878165690279	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAGACTGATGATTTCC	168	False	NA	24	True	AATAAA	-23	NA	89366452	89376323	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_89366772_89369188_89369253_89371602_89371756_89374853_89374984_89375820
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108847	chr3	-	178	1	Intergenic	novelGene_3335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAGTAAGGTATATAAC	9957	False	NA	NA	False	NA	NA	NA	89377934	89377756	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_89377800_89377900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108851	chr3	+	203	1	Intergenic	novelGene_3336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGGCGTTGCTATATAT	963	False	NA	NA	False	NA	NA	NA	89390294	89390497	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_89390300_89390500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108872	chr3	+	5877	15	FSM	ENSMUSG00000027951.17	ENSMUST00000098924.9	5909	15	32	0	32	0	multi-exon	FALSE	canonical	3	79	junction_7	20.181320925195	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTGTTACAAAGTTTTAT	NA	False	NA	12	True	AATAAA	-16	NA	89622360	89660753	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_89622458_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108880	chr3	+	114	1	Genic_Genomic	ENSMUSG00000027951.17	novel	NA	NA	NA	NA	7697	9	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTTTTATATCTTGGTT	NA	False	NA	21	True	AATAAA	-25	NA	89660648	89660762	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr3_+_89660600_89660800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108886	chr3	+	3315	13	FSM	ENSMUSG00000042572.13	ENSMUST00000038356.13	3077	13	-238	0	-238	0	multi-exon	TRUE	canonical	3	944	junction_1	76.7428968844819	239	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGGTTCATGTCCACTT	NA	False	NA	NA	False	AATAAA	-43	NA	89680684	89691307	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_89681346_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108895	chr3	+	260	1	Intergenic	novelGene_3337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGAAAGAAACCGAGGC	NA	False	NA	NA	False	NA	NA	NA	89700901	89701161	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_89700900_89701200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108898	chr3	+	216	1	Intergenic	novelGene_3338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCAGAGGCAGGTGGAGT	NA	False	NA	NA	False	NA	NA	NA	89704764	89704980	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_89704800_89705000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108905	chr3	+	185	1	Intergenic	novelGene_3339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCATACACATAAGATAAAAA	NA	False	NA	NA	False	NA	NA	NA	89749821	89750006	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_89749800_89750000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108915	chr3	+	288	1	Intergenic	novelGene_3340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAGAGTAATATAT	NA	False	NA	14	True	AATAAA	-10	NA	89753558	89753846	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_89753600_89753800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108918	chr3	+	189	1	Intergenic	novelGene_3341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGCCATGTAAAAACCAG	9564	False	NA	NA	False	NA	NA	NA	89791858	89792047	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_89791900_89792000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108927	chr3	-	5476	28	FSM	ENSMUSG00000060671.13	ENSMUST00000168276.8	4265	28	157	-1368	-72	0	multi-exon	TRUE	canonical	3	87	junction_27	29.2541017489138	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATTTGTCTCTTTTCTTT	1090	False	NA	1	True	TATAAA	-43	NA	89870658	89846787	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89868381_89868449_89870463
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108946	chr3	+	188	1	Intergenic	novelGene_3342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGATCTGTACTGTTTA	NA	False	NA	NA	False	NA	NA	NA	89877560	89877748	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_89877600_89877700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108951	chr3	+	182	1	Intergenic	novelGene_3343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAGTGTCTATAATTGTT	NA	False	NA	NA	False	NA	NA	NA	89888397	89888579	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_89888400_89888600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108957	chr3	-	166	1	Intergenic	novelGene_3344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTAAAGTAAAAGGGTT	NA	False	NA	NA	False	NA	NA	NA	89892903	89892737	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_89892700_89892900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108993	chr3	-	3514	29	FSM	ENSMUSG00000042520.17	ENSMUST00000029553.16	3509	29	-5	0	2	0	multi-exon	FALSE	canonical	3	137	junction_1	263.472271321105	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3552	False	NA	-9	True	AATAAA	-21	NA	89959777	89907446	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000108995	chr3	-	3408	28	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	221.790525129089	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3542	False	NA	-9	True	AATAAA	-21	NA	89959787	89907446	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_-_89907561_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109004	chr3	-	3480	29	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	137	junction_1	260.888650107861	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3536	False	NA	-9	True	AATAAA	-21	NA	89959793	89907446	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109008	chr3	-	3348	27	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	264.732096354478	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3542	False	NA	-9	True	AATAAA	-21	NA	89959787	89907446	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_-_89907561_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109015	chr3	-	3459	29	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	137	junction_1	239.227732847313	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3542	False	NA	-9	True	AATAAA	-21	NA	89959787	89907446	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109032	chr3	-	4203	29	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	232.539682810553	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3536	False	NA	-9	True	AATAAA	-21	NA	89959793	89907446	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109046	chr3	-	4071	29	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	254.875579890443	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCAGCCTCTGCCCATTC	3536	False	NA	NA	False	AAAAAG	-24	NA	89959793	89907593	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109125	chr3	-	3444	26	NIC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	-5	2	combination_of_known_junctions	FALSE	canonical	3	289	junction_17	212.482304204374	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCGTTCTTTCCGTGCA	3542	False	NA	-1	True	AATAAA	-22	NA	89959787	89913523	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109130	chr3	-	3369	25	NIC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	-5	2	combination_of_known_junctions	FALSE	canonical	3	158	junction_17	234.13700879803	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCGTTCTTTCCGTGCA	3542	False	NA	-1	True	AATAAA	-22	NA	89959787	89913523	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109155	chr3	-	3395	25	NIC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	158	junction_17	275.661426794215	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3546	False	NA	-4	True	AATAAA	-19	NA	89959783	89913526	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109166	chr3	-	2366	9	ISM	ENSMUSG00000042520.17	ENSMUST00000197177.5	3503	12	2802	742	6	-741	3prime_fragment	FALSE	canonical	3	915	junction_2	60.6872103494633	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTACTCCTTATGGCTAC	NA	False	NA	NA	False	NA	NA	NA	89925798	89914267	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr3_-_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109168	chr3	-	4127	2	ISM	ENSMUSG00000042520.17	ENSMUST00000197177.5	3503	12	9458	742	4458	-741	intron_retention	FALSE	canonical	3	1052	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTACTCCTTATGGCTAC	NA	False	NA	NA	False	NA	NA	NA	89919142	89914267	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr3_-_89915669_89916416
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109170	chr3	+	179	1	Intergenic	novelGene_3345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTTCTTTCCACATGA	NA	False	NA	NA	False	NA	NA	NA	89931770	89931949	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_89931800_89931900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109180	chr3	+	200	1	Antisense	novelGene_ENSMUSG00000042520.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAAAACCAGGGCTTGT	NA	False	NA	NA	False	NA	NA	NA	89944066	89944266	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr3_+_89944100_89944300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109197	chr3	+	175	1	ISM	ENSMUSG00000118504.2	ENSMUST00000239082.2	2360	5	7139	13	7139	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAGTTCAGATTTA	9743	False	NA	2	True	NA	NA	NA	89973188	89973363	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr3_+_89973200_89973400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109206	chr3	+	2243	8	FSM	ENSMUSG00000027940.19	ENSMUST00000029549.16	2230	8	-10	-3	-10	2	multi-exon	FALSE	canonical	3	3249	junction_3	140.088164659085	1166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGCTTGACTTTGTTAAAC	NA	False	NA	21	True	AATAAA	-24	NA	89986836	90008211	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109224	chr3	+	2885	3	FSM	ENSMUSG00000027940.19	ENSMUST00000149734.2	512	3	7	-2380	7	292	multi-exon	FALSE	canonical	3	3261	junction_1	54.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGTACAGTAAGGTCAGTG	NA	False	NA	NA	False	NA	NA	NA	89995374	89999729	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_89995784_89997103_89997167_89997316
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109229	chr3	+	4208	2	FSM	ENSMUSG00000027940.19	ENSMUST00000143281.2	692	2	-1563	-1953	7	295	multi-exon	FALSE	canonical	3	3370	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGTAAGGTCAGTGACC	NA	False	NA	NA	False	NA	NA	NA	89995374	89999732	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_89997167_89997316
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109245	chr3	-	183	1	Intergenic	novelGene_3346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGGAACCCCCCCCCC	2909	False	NA	NA	False	NA	NA	NA	90084553	90084370	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_90084400_90084600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109250	chr3	+	185	1	Intergenic	novelGene_3347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGTCATGAGGCTTGCA	NA	False	NA	NA	False	NA	NA	NA	90101688	90101873	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_90101700_90101900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109260	chr3	+	1103	5	FSM	ENSMUSG00000027937.16	ENSMUST00000029546.15	1101	5	0	-2	0	2	multi-exon	FALSE	canonical	3	314	junction_4	18.2260116317312	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGTGTAATCATTTGGC	NA	False	NA	6	True	AATAAA	-16	NA	90138903	90143147	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_90139348_90139501_90139540_90139735_90139819_90141229_90141310_90142689
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109272	chr3	+	2349	4	FSM	ENSMUSG00000052310.10	ENSMUST00000015467.9	2364	4	18	-3	18	3	multi-exon	FALSE	canonical	3	126	junction_1	8.60232526704263	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGTATCTGATTCTGTG	NA	False	NA	2	True	AATAAA	-19	NA	90155496	90160922	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_90155567_90156252_90156471_90156632_90156764_90158992
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109293	chr3	-	186	1	Intergenic	novelGene_3348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTTTAAAAAAAAAATCCC	1106	False	NA	NA	False	NA	NA	NA	90212547	90212361	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_90212400_90212500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109294	chr3	+	197	1	FSM	ENSMUSG00000042390.10	ENSMUST00000205797.2	2443	1	1896	350	1269	-350	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAGAAAAAAAAGACTA	1212	False	NA	NA	False	NA	NA	NA	90250231	90250428	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_90250200_90250400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109298	chr3	-	181	1	Intergenic	novelGene_3349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAATTCAAAAGACCCA	3016	False	NA	NA	False	NA	NA	NA	90263379	90263198	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_90263200_90263400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109301	chr3	-	227	1	Intergenic	novelGene_3350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTTTTGTTTTTTAG	NA	False	NA	NA	False	NA	NA	NA	90278185	90277958	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_90278000_90278200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109304	chr3	+	173	1	Intergenic	novelGene_3351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGCCACCACCAGCTGGC	3115	False	NA	NA	False	NA	NA	NA	90290786	90290959	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_90290800_90291000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109318	chr3	-	4437	30	FSM	ENSMUSG00000027933.12	ENSMUST00000029542.12	4337	30	-83	-17	1	9	multi-exon	FALSE	canonical	3	154	junction_21	22.3924035870797	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCTGTTCGTCCTGTGT	NA	False	NA	6	True	AATGAA	-33	NA	90340919	90298685	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109342	chr3	+	156	1	Intergenic	novelGene_3352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTGGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	90350349	90350505	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_90350300_90350500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109361	chr3	+	203	1	Intergenic	novelGene_3353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATATTGTATGAATTTTT	NA	False	NA	NA	False	NA	NA	NA	90382630	90382833	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_90382600_90382800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109385	chr3	-	1600	4	FSM	ENSMUSG00000001018.16	ENSMUST00000149884.2	1928	4	-1	329	-1	7	multi-exon	FALSE	canonical	3	599	junction_3	50.1663898109747	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTTATTATGGTTTCA	NA	False	NA	-19	True	AATAAA	-30	NA	90398341	90395669	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_90396901_90397460_90397580_90397854_90397902_90398138
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109389	chr3	-	1802	3	FSM	ENSMUSG00000001018.16	ENSMUST00000107351.2	958	3	-207	-637	-6	7	multi-exon	FALSE	canonical	3	694	junction_2	10	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTTATTATGGTTTCA	NA	False	NA	-19	True	AATAAA	-30	NA	90398306	90395669	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_90396901_90397460_90397580_90397854
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109410	chr3	-	1858	5	FSM	ENSMUSG00000001017.16	ENSMUST00000076639.11	1842	5	-14	-2	0	0	multi-exon	FALSE	canonical	3	97	junction_1	581.611769138143	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTTTCTGTTTATTT	NA	False	NA	-1	True	NA	NA	NA	90416783	90406262	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_90407415_90410402_90410587_90413414_90413569_90414851_90414934_90416497
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109415	chr3	-	3283	5	NIC	ENSMUSG00000001017.16	novel	3257	5	NA	NA	-4	0	intron_retention	FALSE	canonical	3	677	junction_3	338.147157314682	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTTTCTGTTTATTT	NA	False	NA	-1	True	NA	NA	NA	90416787	90406262	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_-_90407415_90409422_90409561_90410402_90410587_90413414_90414934_90416497
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109419	chr3	-	3283	5	FSM	ENSMUSG00000001017.16	ENSMUST00000001043.14	3257	5	-26	0	-1	0	multi-exon	TRUE	canonical	3	892	junction_3	258.017804618208	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTTTCTGTTTATTT	NA	False	NA	-1	True	NA	NA	NA	90416784	90406262	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_90407415_90409422_90409561_90410402_90410590_90413414_90414934_90416497
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109424	chr3	-	1865	5	FSM	ENSMUSG00000001017.16	ENSMUST00000107346.8	1321	5	-6	-538	-4	0	multi-exon	FALSE	canonical	3	97	junction_1	566.644233624591	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTTTCTGTTTATTT	NA	False	NA	-1	True	NA	NA	NA	90416787	90406262	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_90407415_90410402_90410590_90413414_90413569_90414851_90414934_90416497
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109457	chr3	-	180	1	Intergenic	novelGene_3354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATCTGAAGAAAGC	NA	False	NA	NA	False	NA	NA	NA	90418050	90417870	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_90417900_90418000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109464	chr3	-	613	3	FSM	ENSMUSG00000044080.10	ENSMUST00000060738.9	677	3	65	-1	-49	1	multi-exon	FALSE	canonical	3	340	junction_1	21.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGTCTGTACCCTCTGG	NA	False	NA	-2	True	AATAAA	-21	NA	90421634	90418339	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_90418672_90419302_90419457_90421507
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109475	chr3	+	450	3	ISM	ENSMUSG00000042312.11	ENSMUST00000048138.8	715	4	557	0	557	0	3prime_fragment	FALSE	canonical	3	229	junction_1	83.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTTATTTATTTATTTA	NA	False	NA	15	True	AATAAA	-20	NA	90422298	90431888	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr3_+_90422327_90423156_90423350_90431659
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109478	chr3	+	232	1	Intergenic	novelGene_3355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAAACTCGTTCTTTATA	NA	False	NA	NA	False	NA	NA	NA	91870047	91870279	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_91870000_91870300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109487	chr3	+	1891	1	FSM	ENSMUSG00000091421.4	ENSMUST00000169025.4	733	1	-129	-1029	-129	1029	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATGTGAGAGAGATGAA	NA	False	NA	NA	False	NA	NA	NA	92596603	92598494	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_92596600_92598500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109494	chr3	+	186	1	FSM	ENSMUSG00000103273.2	ENSMUST00000192925.2	2544	1	1830	528	1830	-528	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTGGGGATATTTGAGG	NA	False	NA	NA	False	NA	NA	NA	93215604	93215790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_93215600_93215800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109503	chr3	+	195	1	Intergenic	novelGene_3356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTGCCAAGACAAGGCTAA	NA	False	NA	NA	False	NA	NA	NA	93310708	93310903	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_93310700_93310900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109509	chr3	+	506	3	FSM	ENSMUSG00000027907.5	ENSMUST00000029515.5	511	3	6	-1	6	1	multi-exon	FALSE	canonical	3	443	junction_1	9.5	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGAGAGTCAGTAGATTT	NA	False	NA	8	True	AATAAA	-26	NA	93427800	93433595	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_93427861_93431357_93431507_93433298
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109520	chr3	+	183	1	Intergenic	novelGene_3357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTCCTTTTACATATTAT	9985	False	NA	NA	False	NA	NA	NA	93457815	93457998	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_93457800_93458000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109526	chr3	+	650	3	FSM	ENSMUSG00000041959.15	ENSMUST00000045756.14	685	3	37	-2	37	2	multi-exon	TRUE	canonical	3	427	junction_2	41.5	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACGTAGAGTGTTTCTT	NA	False	NA	22	True	AATAAA	-26	NA	93462423	93471952	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_93462519_93468250_93468403_93471549
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109532	chr3	-	176	1	Intergenic	novelGene_3358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATATAAAAAAAGAAATGTC	NA	False	NA	NA	False	NA	NA	NA	93487913	93487737	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_93487700_93487900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109536	chr3	+	174	1	Intergenic	novelGene_3359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAGAAGTACCCTGG	NA	False	NA	4	True	NA	NA	NA	93491220	93491394	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_93491200_93491400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109545	chr3	+	192	1	Intergenic	novelGene_3360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAGAAATAAGACATTA	NA	False	NA	NA	False	NA	NA	NA	93869019	93869211	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_93869000_93869200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109562	chr3	+	1629	7	FSM	ENSMUSG00000028140.14	ENSMUST00000029786.14	1612	7	-4	-13	3	13	multi-exon	FALSE	canonical	3	188	junction_4	26.1002341411379	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTCTGTGTTATTTCTT	8486	False	NA	NA	False	NA	NA	NA	94350627	94356028	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_94350802_94350965_94351123_94351893_94352019_94352207_94352259_94353942_94354045_94354566_94354651_94355092
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109577	chr3	-	5325	12	FSM	ENSMUSG00000028136.16	ENSMUST00000107283.8	3531	12	-25	-1769	-25	0	multi-exon	FALSE	canonical	3	101	junction_1	30.5951975921464	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGGTTTCCTAGACTA	NA	False	NA	-2	True	AATAAA	-21	NA	94489881	94404850	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_94408579_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489551
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109584	chr3	-	6111	12	FSM	ENSMUSG00000028136.16	ENSMUST00000029783.16	6261	12	150	0	-17	0	multi-exon	FALSE	canonical	3	75	junction_1	37.6139590757922	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGGTTTCCTAGACTA	NA	False	NA	-2	True	AATAAA	-21	NA	94489873	94404850	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_94409373_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489551
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109600	chr3	-	2614	13	FSM	ENSMUSG00000005968.15	ENSMUST00000006123.11	2631	13	20	-3	20	3	multi-exon	FALSE	canonical	3	34	junction_11	22.9474036294596	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGTGGGTCTTTTACTT	6461	False	NA	-2	True	AATAAA	-19	NA	94566158	94520060	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94529453_94529994_94530124_94535503_94535618_94539903_94539970_94541764_94541855_94542715_94542803_94546231_94546334_94546701_94546777_94566031
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109626	chr3	+	5104	19	FSM	ENSMUSG00000038902.15	ENSMUST00000107270.9	6399	19	-147	1442	-147	9	multi-exon	FALSE	canonical	3	43	junction_5	12.0021860148809	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACTGAACTCTTTCCTT	NA	False	NA	77	True	TATAAA	-20	NA	94744730	94788195	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_94745052_94761260_94761386_94763353_94763513_94768106_94768283_94769732_94769842_94771398_94771690_94771768_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109632	chr3	+	190	1	Intergenic	novelGene_3361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTTAAAAAATGTGCATT	NA	False	NA	NA	False	NA	NA	NA	94765461	94765651	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_94765500_94765700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109640	chr3	-	955	7	FSM	ENSMUSG00000005779.13	ENSMUST00000005923.7	1183	7	-3	231	-3	-2	multi-exon	FALSE	canonical	3	1538	junction_1	134.402380931292	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGAGTTGGATTTTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	94794275	94791634	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_94791752_94791981_94792071_94792227_94792345_94792970_94793053_94793385_94793533_94793751_94793959_94794079
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109653	chr3	-	177	1	Intergenic	novelGene_3362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAATACAACAATAAC	7798	False	NA	-1	True	NA	NA	NA	94830549	94830372	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_94830400_94830500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109655	chr3	+	182	1	Intergenic	novelGene_3363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATATTTATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	94835736	94835918	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_94835700_94835900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109662	chr3	+	1702	12	FSM	ENSMUSG00000068874.14	ENSMUST00000090839.12	1712	12	10	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	7.58314791042644	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGATCACTCTGTGACG	2664	False	NA	NA	False	AATAAA	-14	NA	94840376	94852069	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_94840474_94844007_94844065_94844205_94844319_94844518_94844705_94845265_94845387_94846956_94847140_94847358_94847538_94849774_94849854_94849935_94850058_94851149_94851243_94851385_94851505_94851716
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109670	chr3	+	4121	10	FSM	ENSMUSG00000005774.13	ENSMUST00000137088.8	4333	10	0	212	0	0	multi-exon	FALSE	canonical	3	32	junction_7	4.21637021355784	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCCTTATGTTTCTTT	NA	False	NA	4	True	NA	NA	NA	94861418	94868660	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_94861563_94862325_94862458_94862662_94862697_94863056_94863140_94863582_94863703_94863797_94863918_94864031_94864114_94864407_94864610_94865092_94865197_94865560
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109674	chr3	+	242	1	Intergenic	novelGene_3364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAACACTTGGGAGGCAG	NA	False	NA	NA	False	NA	NA	NA	94879599	94879841	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_94879600_94879800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109690	chr3	-	4601	10	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	35	junction_9	37.0118432830611	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGCTTTTCTTTTTATG	NA	False	NA	0	True	ATTAAA	-23	NA	94922760	94914141	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94921143_94921240_94922630
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109696	chr3	-	4569	10	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	10	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_9	41.4428060444694	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGCTTTTCTTTTTATG	NA	False	NA	0	True	ATTAAA	-23	NA	94922519	94914141	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94921143_94921240_94922421
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109710	chr3	+	216	1	Intergenic	novelGene_3365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGAAGACTGAGATGGCA	NA	False	NA	NA	False	NA	NA	NA	94928494	94928710	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_94928500_94928700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109718	chr3	+	194	1	Intergenic	novelGene_3366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGGGTCCTCAGCAAAGC	6377	False	NA	NA	False	NA	NA	NA	94939481	94939675	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_94939500_94939700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109725	chr3	-	1305	10	FSM	ENSMUSG00000005625.16	ENSMUST00000071664.12	1276	10	-20	-9	-20	6	multi-exon	FALSE	canonical	3	876	junction_3	370.873576676127	344	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGATAGCTTTGCACACA	NA	False	NA	-4	True	AATAAA	-31	NA	94949883	94939998	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_94940296_94940792_94940858_94940943_94941076_94941219_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109749	chr3	-	3579	15	FSM	ENSMUSG00000028126.17	ENSMUST00000107236.9	3618	15	0	39	0	0	multi-exon	FALSE	canonical	3	17	junction_14	9.68798961896341	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTTCTAGCAATCATT	1253	False	NA	-27	True	AATAAA	-18	NA	95014186	94965879	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_94967397_94967794_94967841_94970965_94971096_94971641_94971786_94972731_94972817_94973122_94973172_94974692_94974777_94975371_94975578_94978022_94978323_94979200_94979354_94979713_94979832_94981303_94981435_94985412_94985494_94990101_94990137_95013686
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109756	chr3	-	3582	15	FSM	ENSMUSG00000028126.17	ENSMUST00000107233.9	3663	15	55	26	0	0	multi-exon	FALSE	canonical	3	28	junction_14	7.6080650011172	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTTCTAGCAATCATT	1253	False	NA	-27	True	AATAAA	-18	NA	95014186	94965879	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_94967397_94967794_94967841_94970965_94971096_94971641_94971786_94972731_94972817_94973122_94973172_94974692_94974777_94975371_94975578_94978022_94978323_94979200_94979354_94979713_94979832_94981303_94981435_94985412_94985494_94990101_94990140_95013686
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109762	chr3	-	186	1	Intergenic	novelGene_3367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTTACTAGAAATGCAATT	3986	False	NA	NA	False	NA	NA	NA	94993122	94992936	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_94992900_94993100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109780	chr3	-	815	7	FSM	ENSMUSG00000092607.10	ENSMUST00000172572.9	1054	7	56	183	-16	0	multi-exon	FALSE	canonical	3	365	junction_2	27.675199487387	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGAGTCCGGTTCCTTG	1294	False	NA	-23	True	AATAAA	-28	NA	95041266	95037029	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_95037195_95037474_95037670_95040135_95040225_95040327_95040423_95040510_95040600_95040868_95040940_95041155
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109807	chr3	-	1924	2	FSM	ENSMUSG00000053192.10	ENSMUST00000065482.6	1923	2	-1	0	-1	0	multi-exon	FALSE	canonical	3	62	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGGGCTTAGTTTTTTC	6379	False	NA	0	True	AATAAA	-16	NA	95135989	95126445	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_95127775_95135394
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109824	chr3	-	2865	8	FSM	ENSMUSG00000015711.9	ENSMUST00000015855.8	3140	8	275	0	275	0	multi-exon	FALSE	canonical	3	150	junction_5	23.7538396466589	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTGTTTCTTTTTAAAA	4625	False	NA	NA	False	ATTAAA	-19	NA	95189112	95160984	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_95162739_95165337_95165497_95166550_95166646_95169521_95169681_95170902_95171088_95172728_95172932_95175541_95175635_95188895
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109850	chr3	-	184	1	Intergenic	novelGene_3368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAAAGTGTTTTTACTGG	NA	False	NA	NA	False	NA	NA	NA	95196822	95196638	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_95196600_95196800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109877	chr3	-	4620	22	FSM	ENSMUSG00000015697.15	ENSMUST00000107170.3	4622	22	2	0	0	0	multi-exon	FALSE	canonical	3	141	junction_11	31.3428122874475	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGGTCTGAAATGGTC	1644	False	NA	-4	True	ATTAAA	-15	NA	95264511	95230835	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109880	chr3	-	4590	22	FSM	ENSMUSG00000015697.15	ENSMUST00000107171.10	4573	22	-17	0	-17	0	multi-exon	FALSE	canonical	3	29	junction_11	47.7030211966969	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGGTCTGAAATGGTC	1671	False	NA	-4	True	ATTAAA	-15	NA	95264484	95230835	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247374_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109899	chr3	+	195	1	Intergenic	novelGene_3369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAACAAGTCAGTCAACAT	NA	False	NA	NA	False	NA	NA	NA	95259143	95259338	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_95259100_95259300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109904	chr3	+	233	1	Intergenic	novelGene_3370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGAGTCATTTCTGGAG	4948	False	NA	NA	False	NA	NA	NA	95292595	95292828	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_95292600_95292800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109913	chr3	+	4388	22	FSM	ENSMUSG00000015522.19	ENSMUST00000102749.11	2699	22	-16	-1673	-16	0	multi-exon	TRUE	canonical	0	0	junction_11	68.4937059524599	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	False	NA	NA	False	TATAAA	-1	NA	95341682	95404551	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109919	chr3	+	4353	22	NIC	ENSMUSG00000015522.19	novel	2699	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	83.8073051654387	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	False	NA	NA	False	TATAAA	-1	NA	95341714	95404551	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401011_95401172_95401757_95401925_95402614
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109930	chr3	+	4306	21	FSM	ENSMUSG00000015522.19	ENSMUST00000090804.12	4325	21	19	0	5	0	multi-exon	FALSE	canonical	0	0	junction_10	84.9941174435031	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	False	NA	NA	False	TATAAA	-1	NA	95341719	95404551	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109936	chr3	+	199	1	Intergenic	novelGene_3371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAATTTGGAAATTTATAA	NA	False	NA	NA	False	AAGAAA	-7	NA	95464441	95464640	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_95464400_95464600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109943	chr3	+	1672	15	FSM	ENSMUSG00000028109.15	ENSMUST00000029754.13	1385	15	-18	-269	-17	190	multi-exon	FALSE	canonical	3	195	junction_6	50.4359059821958	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTGTGTTATTAACAAC	NA	False	NA	9	True	ATTAAA	-20	NA	95466970	95495172	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109949	chr3	+	1644	15	NIC	ENSMUSG00000028109.15	novel	1511	16	NA	NA	0	188	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	83.0812240877466	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATAGTGTGTTATTAACA	NA	False	NA	7	True	ATTAAA	-18	NA	95466987	95495170	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_+_95467035_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109954	chr3	+	1445	16	FSM	ENSMUSG00000028109.15	ENSMUST00000107154.4	1444	16	-1	0	0	0	multi-exon	FALSE	canonical	3	12	junction_15	107.711260114974	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGTTTACCTGAGATA	NA	False	NA	NA	False	AATAAA	-15	NA	95466987	95494907	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95492845_95492901_95494691
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109959	chr3	+	207	1	Intergenic	novelGene_3372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTATTTGGGAGAATAT	NA	False	NA	NA	False	NA	NA	NA	95477262	95477469	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_95477300_95477500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109964	chr3	+	183	1	Intergenic	novelGene_3373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATCACATTCCTTTC	746	False	NA	7	True	NA	NA	NA	95481989	95482172	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_95482000_95482200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109975	chr3	+	2829	5	FSM	ENSMUSG00000046519.16	ENSMUST00000177390.8	2836	5	7	0	7	0	multi-exon	FALSE	canonical	3	50	junction_3	6.87386354243376	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTTCTCTCTGTACAT	NA	False	NA	4	True	AATAAA	-15	NA	95496251	95526553	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_95496446_95499027_95499217_95515216_95515349_95516982_95517098_95524354
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109988	chr3	+	3898	3	FSM	ENSMUSG00000038619.13	ENSMUST00000037983.6	3845	3	-38	-15	-11	15	multi-exon	FALSE	canonical	3	422	junction_2	58	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGTTGTGAAGCAGTTG	371	False	NA	25	True	AATAAA	-36	NA	95532292	95539428	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_95532488_95534059_95534186_95535851
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000109999	chr3	+	181	1	FSM	ENSMUSG00000106383.2	ENSMUST00000200640.2	1742	1	454	1107	454	-1107	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATACTGGTAAAACTATA	269	False	NA	NA	False	NA	NA	NA	95547068	95547249	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_95547100_95547200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110004	chr3	+	199	1	Intergenic	novelGene_3374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGGGATTAAAGGCGTG	735	False	NA	NA	False	NA	NA	NA	95555212	95555411	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_95555200_95555400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110011	chr3	+	3502	3	FSM	ENSMUSG00000038612.17	ENSMUST00000037947.15	3418	3	-77	-7	-77	7	multi-exon	FALSE	canonical	3	754	junction_2	15.5	538	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGTATGGGTCTTTTC	6340	False	NA	21	True	AATAAA	-21	NA	95566021	95570494	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_95566799_95567071_95567320_95568017
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110042	chr3	-	2159	16	FSM	ENSMUSG00000028107.15	ENSMUST00000163530.8	2157	16	0	-2	0	2	multi-exon	TRUE	canonical	1	51	junction_13	151.691997884602	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCCTTCATCTGAGT	NA	False	NA	-17	True	AATAAA	-18	NA	95662183	95647285	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95660318_95660443_95661630_95661828_95662069
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110044	chr3	-	2503	17	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	0	2	intron_retention	FALSE	canonical	1	178	junction_5	104.120554376886	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCCTTCATCTGAGT	NA	False	NA	-17	True	AATAAA	-18	NA	95662183	95647285	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110077	chr3	-	3285	9	FSM	ENSMUSG00000028106.14	ENSMUST00000197449.2	3298	9	20	-7	0	7	multi-exon	FALSE	canonical	3	54	junction_5	23.6851087183488	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATGAATTGAGTATTG	9966	False	NA	3	True	ATTAAA	-22	NA	95726070	95679559	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95693631_95693710_95694595_95694697_95697411_95697542_95725858
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110087	chr3	+	186	1	Intergenic	novelGene_3375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAACCACAGATGAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	95703313	95703499	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_95703300_95703500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110091	chr3	+	205	1	Intergenic	novelGene_3376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATCTGCCTGCCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	95730867	95731072	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_95730900_95731100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110098	chr3	-	2443	16	FSM	ENSMUSG00000015748.14	ENSMUST00000015892.14	2933	16	0	490	0	4	multi-exon	FALSE	canonical	3	400	junction_5	22.8428447343048	291	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATATTTTTCATATGGT	NA	False	NA	-30	True	ATTAAA	-20	NA	95763197	95737925	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_95738278_95739872_95739935_95741064_95741149_95741395_95741515_95742665_95742780_95742955_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755161_95756226_95756374_95758874_95759006_95760755_95760950_95763060
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110127	chr3	+	209	1	Intergenic	novelGene_3377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	386	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAGCTCATGTGTA	NA	False	NA	NA	False	NA	NA	NA	95781323	95781532	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_95781300_95781500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110134	chr3	-	191	1	Intergenic	novelGene_3378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGCATGAGTCACCATGC	NA	False	NA	NA	False	NA	NA	NA	95784000	95783809	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_95783800_95784000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110146	chr3	-	1399	6	FSM	ENSMUSG00000038550.11	ENSMUST00000036418.10	1398	6	4	-5	4	3	multi-exon	FALSE	canonical	3	105	junction_5	32.3604697122894	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTTTTTTTTTTTTTT	NA	False	NA	2	True	ATTAAA	-18	NA	95789539	95785811	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492_95788902_95789466
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110161	chr3	+	1754	7	FSM	ENSMUSG00000015750.16	ENSMUST00000056710.10	1601	7	-129	-24	-43	24	multi-exon	FALSE	canonical	3	108	junction_6	85.2670641116617	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGACTTGGCTTTAAGAG	NA	False	NA	4	True	AATAAA	-19	NA	95801237	95804781	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_95801596_95802132_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548_95803673_95804005
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110183	chr3	+	207	1	Intergenic	novelGene_3379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTGTAATCAAATCACTA	NA	False	NA	NA	False	NA	NA	NA	95832227	95832434	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_95832200_95832400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110187	chr3	+	3282	7	FSM	ENSMUSG00000015749.13	ENSMUST00000165307.8	3274	7	-5	-3	-5	3	multi-exon	FALSE	canonical	3	1451	junction_5	106.857641540301	1584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCAGTGTGTGATTGTTC	NA	False	NA	108	True	AATAAA	-25	NA	95836552	95854705	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845352_95851618_95851674_95852491
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110202	chr3	+	3202	7	FSM	ENSMUSG00000015749.13	ENSMUST00000015893.13	1381	7	1	-1822	1	-3	multi-exon	FALSE	canonical	3	152	junction_5	557.690301352123	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTAGCTTCAGTGTGTGA	NA	False	NA	102	True	AATAAA	-19	NA	95836590	95854699	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845316_95851618_95851674_95852491
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110208	chr3	+	2212	1	NIC	ENSMUSG00000015749.13	novel	3274	7	NA	NA	975	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTCAGTGTGTGATTG	NA	False	NA	105	True	AATAAA	-22	NA	95852490	95854702	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_+_95852500_95854700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110228	chr3	+	193	1	Intergenic	novelGene_3380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTGAGGGTAGTGGGT	2058	False	NA	NA	False	NA	NA	NA	95984870	95985063	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_95984900_95985100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110238	chr3	+	3906	12	NNC	ENSMUSG00000038495.15	novel	8043	12	NA	NA	16	-3966	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	17.0565418486489	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTTGATATTAGGGCT	NA	False	NA	NA	False	AATAAA	-20	NA	96011875	96064480	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr3_+_96012132_96043784_96043936_96047727_96047917_96048932_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110265	chr3	+	177	1	Intergenic	novelGene_3381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAAGGTGTGTGTGTG	9804	False	NA	NA	False	NA	NA	NA	96118404	96118581	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_96118400_96118600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110268	chr3	+	201	1	Intergenic	novelGene_3382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTATCCCATCATCCAAGC	NA	False	NA	NA	False	NA	NA	NA	96123313	96123514	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_96123300_96123500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110275	chr3	-	182	1	Intergenic	novelGene_3383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAAAAAGGGAAATTAGCA	2052	False	NA	NA	False	NA	NA	NA	96196420	96196238	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_96196200_96196400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110279	chr3	+	183	1	Intergenic	novelGene_3384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAATAATTTTGTG	2837	False	NA	NA	False	NA	NA	NA	96198269	96198452	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_96198300_96198500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110290	chr3	+	232	1	Intergenic	novelGene_3385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1083	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGTCTGAGCCCTAGGCT	9067	False	NA	NA	False	AAAACA	-30	NA	96230228	96230460	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_96230200_96230500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110301	chr3	+	215	1	Intergenic	novelGene_3386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATGGAATCTACCTAAC	1786	False	NA	NA	False	NA	NA	NA	96249638	96249853	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_96249600_96249900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110313	chr3	+	175	1	Intergenic	novelGene_3387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAGATAGATAGATAGATA	1868	False	NA	NA	False	NA	NA	NA	96375888	96376063	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_96375900_96376100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110316	chr3	-	208	1	Intergenic	novelGene_3388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGGATAGATGGTAGAAT	NA	False	NA	2	True	NA	NA	NA	96442615	96442407	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_96442400_96442600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110325	chr3	+	2827	8	FSM	ENSMUSG00000038393.15	ENSMUST00000049093.8	2795	8	-3	-29	0	3	multi-exon	FALSE	canonical	3	228	junction_1	94.3746333956929	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACTGGAGAAGTTACTAG	NA	False	NA	48	True	AATAAA	-43	NA	96465272	96469202	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_96465802_96466207_96466281_96466385_96466534_96466648_96466752_96466904_96467162_96467253_96467411_96467523_96467676_96467794
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110329	chr3	+	2810	8	FSM	ENSMUSG00000038393.15	ENSMUST00000074519.13	2827	8	0	17	0	8	multi-exon	FALSE	canonical	3	279	junction_1	78.2390371795021	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTTTCTTGTCTATGA	NA	False	NA	28	True	AATAAA	-23	NA	96465272	96469182	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_96465802_96466204_96466281_96466385_96466534_96466648_96466752_96466904_96467162_96467253_96467411_96467523_96467676_96467794
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110359	chr3	+	215	1	Intergenic	novelGene_3389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAAAGAAGGCTAAGG	9468	False	NA	NA	False	NA	NA	NA	96498193	96498408	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_96498200_96498400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110404	chr3	+	1749	4	FSM	ENSMUSG00000028102.16	ENSMUST00000118557.8	2424	4	38	637	-32	3	multi-exon	FALSE	canonical	3	279	junction_3	9.46337971105226	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTTATTCAATTCAAGA	NA	False	NA	12	True	ATTAAA	-19	NA	96542783	96552045	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_96543060_96543989_96544106_96544446_96544649_96550890
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110432	chr3	+	187	1	Intergenic	novelGene_3390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATAGCTGACTGATCTT	NA	False	NA	NA	False	NA	NA	NA	96593600	96593787	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_96593600_96593800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110457	chr3	+	2829	14	FSM	ENSMUSG00000028101.19	ENSMUST00000064900.16	2931	14	-1	103	-1	5	multi-exon	FALSE	canonical	3	105	junction_1	24.6852374253431	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTCATGGAGGGGAAGGGA	3286	False	NA	10	True	AATAAA	-20	NA	96604397	96613283	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_96604512_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110473	chr3	-	2235	15	FSM	ENSMUSG00000028099.9	ENSMUST00000029741.9	2390	15	125	30	-27	3	multi-exon	FALSE	canonical	3	175	junction_5	23.0394515240839	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATCTGTTCTTAGCAA	NA	False	NA	NA	False	AATAAA	-20	NA	96634819	96618835	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149_96633316_96634664
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110494	chr3	+	2324	9	FSM	ENSMUSG00000028098.14	ENSMUST00000029740.14	2209	9	-114	-1	-114	1	multi-exon	FALSE	canonical	3	647	junction_7	60.034885691571	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTTCAGCGTCTCAAA	4681	False	NA	15	True	AATAAA	-22	NA	96634865	96698469	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_96635227_96661650_96661710_96665292_96665351_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110504	chr3	-	210	1	Intergenic	novelGene_3391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTGCATAAAACACCTCAG	NA	False	NA	NA	False	AATAAA	-6	NA	96655606	96655396	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_96655400_96655600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110509	chr3	-	233	1	Intergenic	novelGene_3392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAATGTCACACCCCTTCC	NA	False	NA	NA	False	TTTAAA	-4	NA	96746412	96746179	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_96746200_96746400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110511	chr3	-	4597	14	FSM	ENSMUSG00000028096.14	ENSMUST00000029738.14	4598	14	18	-17	-16	17	multi-exon	FALSE	canonical	3	110	junction_5	18.4284960714547	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCACTGAATGTCATGGCT	1881	False	NA	NA	False	AATAAA	-31	NA	96812644	96775579	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_96778911_96779792_96779859_96780775_96780866_96782943_96783040_96787389_96787483_96787936_96788026_96789834_96789945_96797224_96797306_96798118_96798240_96800181_96800284_96800813_96800921_96804648_96804753_96805807_96805868_96812497
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110523	chr3	+	208	1	Intergenic	novelGene_3393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGTCTCTTTAATAAAAC	NA	False	NA	NA	False	NA	NA	NA	96993270	96993478	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_96993300_96993500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110534	chr3	+	1760	10	FSM	ENSMUSG00000028093.16	ENSMUST00000090759.5	1754	10	-2	-4	-2	4	multi-exon	FALSE	canonical	3	1030	junction_1	83.6891662236509	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGCCTGTGTGTAAAA	NA	False	NA	15	True	NA	NA	NA	97066090	97083894	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97073933_97075302_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110550	chr3	+	197	1	FSM	ENSMUSG00000028093.16	ENSMUST00000198329.2	3291	1	114	2980	114	421	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAACTGGATGTATGCCAA	NA	False	NA	NA	False	NA	NA	NA	97081438	97081635	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_97081400_97081600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110558	chr3	+	189	1	FSM	ENSMUSG00000106536.2	ENSMUST00000199972.2	3292	1	244	2859	244	-2859	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCCTTTCTTGTCTTCCA	6919	False	NA	NA	False	NA	NA	NA	97169914	97170103	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_97169900_97170100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110563	chr3	-	3020	23	NNC	ENSMUSG00000028089.6	novel	3008	23	NA	NA	-28	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	68.3504732250088	88	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTTTTTTCTTACCC	NA	False	NA	0	True	AATAGA	-21	NA	97517547	97468049	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr3_-_97468404_97469894_97470004_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97477721_97478219_97478384_97479876_97480026_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97501487_97505007_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110576	chr3	+	4904	8	FSM	ENSMUSG00000038205.13	ENSMUST00000045743.13	5006	8	102	0	100	0	multi-exon	FALSE	canonical	3	53	junction_1	11.768168758068	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAGTTACTTACTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	97565629	97581128	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_97565686_97565904_97566083_97569588_97569756_97570897_97570992_97571183_97571305_97573897_97574032_97574674_97574744_97577043
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110580	chr3	+	4953	8	NNC	ENSMUSG00000038205.13	novel	5006	8	NA	NA	139	-3	intron_retention	FALSE	canonical	3	6	junction_1	26.4683098926136	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTTGAGTTACTTACT	NA	False	NA	NA	False	AATAAA	-17	NA	97565668	97581125	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr3_+_97565777_97565904_97566083_97569588_97569756_97570897_97570992_97571183_97571305_97573897_97574032_97574674_97574744_97577043
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110592	chr3	+	181	1	Intergenic	novelGene_3394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAGGCTACTTTATCC	9332	False	NA	NA	False	NA	NA	NA	97667954	97668135	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_97668000_97668100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110597	chr3	+	2794	5	FSM	ENSMUSG00000027879.10	ENSMUST00000029476.9	2810	5	17	-1	-9	1	multi-exon	FALSE	canonical	3	330	junction_4	8.07774721070176	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGTGTGAAGTTCTGTC	NA	False	NA	19	True	AATAAA	-18	NA	97808522	97830593	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_97808737_97814536_97814647_97819894_97820056_97821815_97821963_97828431
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110607	chr3	-	186	1	Intergenic	novelGene_3395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAAGGAGGAGA	NA	False	NA	1	True	NA	NA	NA	97905523	97905337	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_97905300_97905500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110614	chr3	+	189	1	Intergenic	novelGene_3396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAGAAAGAAAGGAATGAG	7226	False	NA	NA	False	NA	NA	NA	97908450	97908639	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_97908400_97908600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110620	chr3	-	1895	12	FSM	ENSMUSG00000053398.12	ENSMUST00000065793.12	1893	12	0	-2	0	2	multi-exon	FALSE	canonical	3	1070	junction_1	240.376770374213	1866	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCTGTGTGATCATTA	NA	False	NA	0	True	AGTAAA	-18	NA	98247306	98220483	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_98220774_98221483_98221722_98222380_98222512_98223721_98223855_98226935_98227089_98227961_98228111_98228528_98228662_98235362_98235462_98235604_98235660_98240550_98240617_98241822_98241975_98247010
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110642	chr3	-	3379	27	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	79	junction_25	119.848400294933	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGGTTCCCTGAATATT	NA	False	NA	-14	True	ATTAAA	-16	NA	100069724	100045494	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067237_100068335_100068539_100069659
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110644	chr3	-	3435	27	FSM	ENSMUSG00000033285.16	ENSMUST00000052120.14	3432	27	-2	-1	-2	1	multi-exon	FALSE	canonical	3	562	junction_13	50.4098586206493	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGGTTCCCTGAATATT	NA	False	NA	-14	True	ATTAAA	-16	NA	100069725	100045494	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110662	chr3	+	197	1	Intergenic	novelGene_3397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTGCGCCACCACTGCCT	NA	False	NA	NA	False	NA	NA	NA	100066097	100066294	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_100066100_100066300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110667	chr3	+	2925	14	FSM	ENSMUSG00000027865.11	ENSMUST00000029459.10	3008	14	85	-2	-52	2	multi-exon	FALSE	canonical	3	84	junction_11	11.7054581917706	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATAAGGTGTTCTATGG	NA	False	NA	NA	False	AATAAA	-15	NA	100069781	100114299	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_100069982_100077251_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992_100090070_100093885_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109289_100109434_100113087
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110682	chr3	+	189	1	Intergenic	novelGene_3398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAATGCAGGTGTAGAA	NA	False	NA	NA	False	NA	NA	NA	100575622	100575811	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_100575600_100575800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110690	chr3	+	198	1	Intergenic	novelGene_3399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	469	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTTCATTGTTGTAAAG	NA	False	NA	NA	False	NA	NA	NA	100754597	100754795	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_100754600_100754800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110704	chr3	-	4577	23	FSM	ENSMUSG00000033222.17	ENSMUST00000076941.12	4541	23	-31	-5	-31	5	multi-exon	TRUE	canonical	3	226	junction_14	22.0712594988997	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGCTGTGTGTTCACCA	NA	False	NA	-2	True	AATAAA	-22	NA	100877010	100846170	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110713	chr3	-	183	1	Intergenic	novelGene_3400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCACATTTGCTTCTCTT	NA	False	NA	NA	False	NA	NA	NA	100862242	100862059	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_100862100_100862200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110726	chr3	-	6086	9	FSM	ENSMUSG00000027864.10	ENSMUST00000102694.4	5902	9	-185	1	-185	-1	multi-exon	FALSE	canonical	3	82	junction_8	11.5515150521479	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTTGTGTGAGGAAGT	4596	False	NA	-4	True	ATTAAA	-17	NA	101017779	100947548	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_100950839_100952759_100953066_100957405_100957514_100963551_100963972_100967952_100968379_100980125_100980507_100984358_100984773_100987443_100987813_101017407
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110741	chr3	-	159	1	ISM	ENSMUSG00000033161.11	ENSMUST00000036493.8	3679	23	28303	4	1179	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	425	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTTGAGTCCTTGTC	NA	False	NA	-10	True	AATAAA	-20	NA	101483697	101483538	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr3_-_101483500_101483700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110748	chr3	-	3696	23	FSM	ENSMUSG00000033161.11	ENSMUST00000036493.8	3679	23	-21	4	-21	-4	multi-exon	FALSE	canonical	3	297	junction_17	44.2662166204014	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTTGAGTCCTTGTC	NA	False	NA	-10	True	AATAAA	-20	NA	101512021	101483538	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_101483901_101484234_101484327_101486309_101486412_101486836_101486968_101487089_101487236_101488462_101488587_101489040_101489196_101489317_101489487_101490003_101490155_101491060_101491198_101492038_101492215_101493442_101493636_101494131_101494267_101496321_101496432_101497082_101497282_101497762_101498032_101498436_101498555_101498655_101498791_101499096_101499211_101499693_101499898_101501518_101501579_101502313_101502425_101511718
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110785	chr3	-	3275	32	NIC	ENSMUSG00000027855.14	novel	3437	33	NA	NA	0	3	combination_of_known_junctions	TRUE	canonical	3	64	junction_8	14.4403037547212	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTCATTGATTTTTGT	NA	False	NA	1	True	ATTAAA	-17	NA	102843416	102725811	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842982_102843301
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110786	chr3	-	3270	32	NIC	ENSMUSG00000027855.14	novel	3189	33	NA	NA	-1	3	combination_of_known_junctions	FALSE	canonical	3	35	junction_31	16.9376649901153	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTCATTGATTTTTGT	NA	False	NA	1	True	ATTAAA	-17	NA	102843417	102725811	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842976_102843301
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110802	chr3	+	2394	5	FSM	ENSMUSG00000027854.13	ENSMUST00000029447.12	7375	5	5	4976	5	1289	multi-exon	FALSE	canonical	3	364	junction_4	22.0609949911603	265	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCTCATTTTACTGAGAA	NA	False	NA	20	True	AATAAA	-17	NA	102903028	102910799	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_102903284_102903471_102903578_102904558_102904702_102905805_102905920_102909023
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110812	chr3	+	203	1	Intergenic	novelGene_3401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCCTCTTTCTGGGCCA	NA	False	NA	NA	False	NA	NA	NA	102908740	102908943	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_102908700_102908900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110818	chr3	+	4184	20	FSM	ENSMUSG00000068823.11	ENSMUST00000029446.13	4318	20	137	-3	-44	3	multi-exon	FALSE	canonical	0	0	junction_12	4594.89725408776	298	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGCGCTTTCATTATTGA	NA	False	NA	25	True	AATAAA	-28	NA	102927878	102965505	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110843	chr3	+	4432	7	FSM	ENSMUSG00000027852.15	ENSMUST00000029445.13	4470	7	38	0	-25	0	multi-exon	FALSE	canonical	3	741	junction_4	34.7870505919787	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCCTACTGCCATAGGG	NA	False	NA	26	True	AATAAA	-28	NA	102965638	102975230	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110859	chr3	-	291	1	Intergenic	novelGene_3402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGGAGGGAAGGAGAAC	NA	False	NA	NA	False	NA	NA	NA	102994142	102993851	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_102993900_102994100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110898	chr3	+	1092	7	FSM	ENSMUSG00000005687.15	ENSMUST00000135017.2	1405	7	-25	338	-2	1	multi-exon	FALSE	canonical	3	101	junction_2	1366.36225268249	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTGTGGCTATAGT	5021	False	NA	49	True	AATAAA	-17	NA	103079062	103086144	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_103079182_103079263_103079357_103080549_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110902	chr3	+	2166	6	NIC	ENSMUSG00000005687.15	novel	1467	7	NA	NA	0	1	intron_retention	FALSE	canonical	3	3786	junction_4	89.7850767109991	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTGTGGCTATAGT	5023	False	NA	49	True	AATAAA	-17	NA	103079064	103086144	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103082986_103084654_103084736_103085670
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110906	chr3	+	1133	6	FSM	ENSMUSG00000005687.15	ENSMUST00000155520.8	737	6	-13	-383	0	3	multi-exon	FALSE	canonical	3	3472	junction_3	182.474107752306	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGTGGCTATAGTGA	5023	False	NA	51	True	AATAAA	-19	NA	103079064	103086146	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_103079357_103080590_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110912	chr3	+	388	1	ISM	ENSMUSG00000005687.15	ENSMUST00000005830.15	1467	7	6788	322	6658	3	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGTGGCTATAGTGA	NA	False	NA	51	True	AATAAA	-19	NA	103085758	103086146	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr3_+_103085800_103086100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110921	chr3	-	185	1	Intergenic	novelGene_3403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAGAAAACAAAGTATTAG	NA	False	NA	NA	False	NA	NA	NA	103092082	103091897	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_103091900_103092100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110941	chr3	-	213	1	Intergenic	novelGene_3404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGCTCATCAGAACGCCT	NA	False	NA	NA	False	TATAAA	-8	NA	103189034	103188821	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_103188800_103189000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110948	chr3	-	216	1	Intergenic	novelGene_3405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAGACTCAGTAAAGTG	NA	False	NA	NA	False	NA	NA	NA	103193735	103193519	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_103193500_103193700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110965	chr3	-	8071	16	FSM	ENSMUSG00000008730.18	ENSMUST00000029438.15	4185	16	-44	-3842	-25	-3	multi-exon	FALSE	canonical	2	63	junction_1	12.16260206078	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTGGCTGGTTTCAAT	NA	False	NA	-5	True	AATAAA	-15	NA	103698616	103647133	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_103651753_103652575_103652707_103654110_103654353_103656594_103656802_103657518_103657702_103658091_103658235_103660695_103660831_103661516_103661639_103665850_103666077_103667810_103667974_103668802_103668988_103670988_103671076_103671777_103671898_103676713_103676838_103684537_103685616_103698310
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110972	chr3	+	166	1	Antisense	novelGene_ENSMUSG00000027845.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTACTTAAAATTATTTTT	NA	False	NA	NA	False	NA	NA	NA	103708248	103708414	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr3_+_103708200_103708400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110982	chr3	+	6281	7	FSM	ENSMUSG00000044098.15	ENSMUST00000068879.11	6712	7	415	16	-1	7	multi-exon	FALSE	canonical	3	59	junction_2	6.92218655243173	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATGTTTCAAAATGAATA	NA	False	NA	25	True	AATAAA	-22	NA	103821881	103873936	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_103822470_103835666_103836341_103860952_103861091_103861420_103861564_103867318_103867487_103868788_103868898_103869475
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000110999	chr3	+	3254	19	FSM	ENSMUSG00000058388.15	ENSMUST00000063717.14	3327	19	75	-2	-33	0	multi-exon	FALSE	canonical	3	55	junction_6	13.8399136513399	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTTCTAGGCTTTTT	NA	False	NA	8	True	AATAAA	-18	NA	103875648	103914806	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_103876104_103876370_103876447_103877069_103877127_103889201_103889272_103890261_103890421_103893068_103893226_103894742_103894878_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111010	chr3	+	3163	18	NIC	ENSMUSG00000058388.15	novel	5647	20	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	19.101984534304	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTTCTAGGCTTTTT	NA	False	NA	8	True	AATAAA	-18	NA	103875682	103914806	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_+_103876104_103876370_103876447_103889201_103889272_103890261_103890421_103893068_103893226_103894742_103894878_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111024	chr3	-	203	1	Intergenic	novelGene_3406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCATGGTTTGAGAGGG	NA	False	NA	NA	False	NA	NA	NA	104181968	104181765	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_104181800_104182000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111028	chr3	-	7174	18	FSM	ENSMUSG00000032913.14	ENSMUST00000046316.11	7099	18	-75	0	3	0	multi-exon	FALSE	canonical	3	56	junction_3	14.2253246568117	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTGGTCTTCTCTTGCC	NA	False	NA	-20	True	AATAAA	-16	NA	104419231	104361295	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_104365281_104368716_104369005_104369974_104370125_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111044	chr3	+	187	1	Intergenic	novelGene_3407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTAAGATGTTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	104434598	104434785	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_104434600_104434800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111047	chr3	+	177	1	Intergenic	novelGene_3408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCAGAATGAGCAAGGCC	NA	False	NA	NA	False	NA	NA	NA	104445456	104445633	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_104445500_104445600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111054	chr3	-	190	1	Intergenic	novelGene_3409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAAATTAAAATAA	NA	False	NA	NA	False	NA	NA	NA	104543559	104543369	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_104543400_104543600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111069	chr3	+	1721	10	FSM	ENSMUSG00000002228.8	ENSMUST00000002298.7	1721	10	0	0	0	0	multi-exon	TRUE	canonical	3	56	junction_1	13.4200881305638	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTGTGTCATTATTTGC	NA	False	NA	NA	False	AATAAA	-14	NA	104688371	104693334	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_104688726_104689916_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692069_104692271_104692336_104692501_104692610_104692713_104692866_104693017
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111083	chr3	+	1091	5	FSM	ENSMUSG00000002233.14	ENSMUST00000002303.12	1202	5	111	0	-35	0	multi-exon	FALSE	canonical	3	201	junction_3	22.8965062837106	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCTTCCTGTCTTT	NA	False	NA	13	True	AATAAA	-20	NA	104696314	104701775	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_104696400_104699204_104699369_104699880_104700002_104700215_104700347_104701185
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111108	chr3	-	3460	21	FSM	ENSMUSG00000002227.16	ENSMUST00000168015.8	3460	21	5	-5	1	5	multi-exon	TRUE	canonical	3	138	junction_20	265.434944948852	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTGCGTGTGTCTCATC	NA	False	NA	-20	True	AAGAAA	-26	NA	104725616	104702146	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251_104725473_104725573
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111110	chr3	-	3427	21	NIC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	-2	4	combination_of_known_splicesites	FALSE	canonical	3	106	junction_20	272.054755518076	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCGTGTGTCTCAT	NA	False	NA	-21	True	AAGAAA	-25	NA	104725619	104702147	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251_104725438_104725573
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111149	chr3	-	4860	6	FSM	ENSMUSG00000062127.12	ENSMUST00000098763.7	4834	6	-24	-2	-21	0	multi-exon	FALSE	canonical	3	66	junction_1	8.46167832052247	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTGGGGGAAAAGTCTT	1448	False	NA	-11	True	ATTAAA	-17	NA	104960291	104909230	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_104913445_104915263_104915372_104918508_104918740_104939968_104940077_104946180_104946304_104960215
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111160	chr3	-	241	1	Intergenic	novelGene_3410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTTACCAAAGAGGCCT	NA	False	NA	NA	False	NA	NA	NA	105430420	105430179	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_105430200_105430400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111172	chr3	+	187	1	Intergenic	novelGene_3411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCTTTAATAAATTCCAT	NA	False	NA	NA	False	NA	NA	NA	105518025	105518212	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_105518000_105518200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111176	chr3	-	2785	11	FSM	ENSMUSG00000027905.16	ENSMUST00000090680.11	2905	11	120	0	-2	0	multi-exon	FALSE	canonical	3	276	junction_2	22.5302019520465	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTTTATTCTGTCGAG	NA	False	NA	0	True	AATAAA	-23	NA	105594770	105585585	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_105587029_105587659_105587762_105587865_105587972_105588296_105588380_105590041_105590101_105590192_105590332_105590468_105590612_105590731_105590847_105591600_105591770_105593954_105594050_105594439
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111188	chr3	+	177	1	Antisense	novelGene_ENSMUSG00000027905.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACAGTCTTCCTAATACT	NA	False	NA	NA	False	NA	NA	NA	105589146	105589323	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr3_+_105589100_105589300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111196	chr3	-	2450	8	FSM	ENSMUSG00000068798.11	ENSMUST00000090678.11	2407	8	-39	-4	-39	4	multi-exon	TRUE	canonical	3	409	junction_7	23.7667234354495	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCTTCTCTTTATCCAG	NA	False	NA	-14	True	AATAAA	-16	NA	105708691	105634578	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_105636281_105639271_105639388_105645070_105645215_105646829_105646971_105648661_105648719_105653219_105653289_105657560_105657645_105708554
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111204	chr3	-	1188	7	ISM	ENSMUSG00000000563.18	ENSMUST00000118209.8	1604	8	801	-18	-22	18	3prime_fragment	FALSE	canonical	3	4041	junction_4	350.10446853602	1370	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATAGCACTTCTTTATT	NA	False	NA	-2	True	AATAAA	-34	NA	105866614	105849995	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr3_-_105850380_105851002_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866177_105866215_105866463
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111217	chr3	+	3643	10	FSM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	45	-6	45	6	multi-exon	FALSE	canonical	3	910	junction_4	50.9162953856864	653	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTTGTTGTTGTCTCA	NA	False	NA	18	True	AATAAA	-37	NA	105866729	105877082	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111248	chr3	+	426	1	FSM	ENSMUSG00000092072.4	ENSMUST00000170669.4	429	1	-2	5	-2	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	251	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAGTTATTATTTATTCA	NA	False	NA	NA	False	AATAAA	-45	NA	105941977	105942403	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_105942000_105942400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111257	chr3	-	2068	9	FSM	ENSMUSG00000040774.16	ENSMUST00000068301.11	2814	9	26	720	26	3	multi-exon	FALSE	canonical	3	190	junction_8	25.7924407530579	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTTTCTCAATTTTATT	NA	False	NA	-2	True	AATAAA	-19	NA	106455092	106410295	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_106411061_106411841_106411968_106412465_106412625_106413036_106413169_106420118_106420204_106438452_106438595_106440670_106440819_106446505_106446920_106454995
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111273	chr3	+	754	4	FSM	ENSMUSG00000087260.6	ENSMUST00000199317.2	743	4	-11	0	-11	0	multi-exon	FALSE	canonical	3	1062	junction_2	64.8194072447099	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTCATTTCTGGTCT	3140	False	NA	12	True	AATAAA	-16	NA	107186303	107191398	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_107186430_107187185_107187248_107189224_107189343_107190950
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111287	chr3	+	193	1	Intergenic	novelGene_3412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGCCAACTAAATCATC	12	True	NA	NA	False	NA	NA	NA	107211368	107211561	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_107211400_107211600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111299	chr3	-	3214	2	FSM	ENSMUSG00000048109.11	ENSMUST00000061772.11	4343	2	609	520	37	-520	multi-exon	FALSE	canonical	3	61	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTCTGCCTGGAAGTG	NA	False	NA	-5	True	AATAAA	-20	NA	107240380	107233256	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_107233621_107237530
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111310	chr3	-	232	1	Intergenic	novelGene_3413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACAGCTCCACCTAAGGT	NA	False	NA	NA	False	NA	NA	NA	107254868	107254636	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_107254600_107254900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111316	chr3	-	3232	21	FSM	ENSMUSG00000014601.14	ENSMUST00000064759.7	3215	21	-16	-1	-16	1	multi-exon	FALSE	canonical	3	175	junction_2	23.6893963620857	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGCCTTGTGTGTAGAT	NA	False	NA	0	True	ATTAAA	-18	NA	107539026	107519846	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111340	chr3	+	189	1	Intergenic	novelGene_3414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTCAGAAGGGCTGT	NA	False	NA	NA	False	NA	NA	NA	107721504	107721693	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_107721500_107721700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111349	chr3	-	1198	8	FSM	ENSMUSG00000004038.10	ENSMUST00000004136.10	1311	8	113	0	113	0	multi-exon	FALSE	canonical	3	154	junction_5	50.6947648547014	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTCTTTTTCTTTTGC	NA	False	NA	0	True	AATAAA	-20	NA	107876486	107871011	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_107871613_107873402_107873514_107873594_107873691_107874890_107874992_107875081_107875164_107875451_107875517_107876078_107876155_107876420
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111365	chr3	-	1085	8	FSM	ENSMUSG00000040562.13	ENSMUST00000012348.9	1064	8	-18	-3	-18	3	multi-exon	FALSE	canonical	3	626	junction_6	40.3692143766479	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGTGTATTATTTTTCT	2024	False	NA	-1	True	AATAAA	-16	NA	107893787	107889014	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_107889455_107891251_107891363_107891444_107891541_107892364_107892466_107892562_107892645_107892933_107892999_107893349_107893426_107893673
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111374	chr3	+	254	1	Intergenic	novelGene_3415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTCACCTGTATAAGTGA	4844	False	NA	NA	False	AAAAAG	-32	NA	107902142	107902396	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_107902100_107902400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111411	chr3	-	3612	19	FSM	ENSMUSG00000027889.18	ENSMUST00000102637.8	3586	19	-21	-5	-21	3	multi-exon	TRUE	canonical	3	124	junction_18	33.5369705707258	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGTGAAGGTGTCTGTT	NA	False	NA	-3	True	AATAAA	-20	NA	107993988	107981374	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533_107993669_107993754
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111432	chr3	-	3275	9	FSM	ENSMUSG00000000001.5	ENSMUST00000000001.5	3262	9	-8	-5	-8	5	multi-exon	FALSE	canonical	3	376	junction_4	42.0652395095998	287	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTATTTGTCTTGTTTTT	NA	False	NA	-5	True	ATTAAA	-37	NA	108053470	108014590	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_108016633_108016718_108016929_108019250_108019405_108019788_108019919_108023078_108023208_108025616_108025775_108030857_108031000_108031110_108031154_108053203
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111450	chr3	+	1027	9	FSM	ENSMUSG00000068749.10	ENSMUST00000090569.10	1239	9	214	-2	214	2	multi-exon	FALSE	canonical	3	2544	junction_4	248.775972262194	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAATAGTCTGTGATCTT	NA	False	NA	13	True	AATAAA	-17	NA	108164455	108187292	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_108164622_108169001_108169069_108172381_108172509_108173748_108173817_108175108_108175217_108175348_108175408_108176143_108176247_108179606_108179694_108187050
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111457	chr3	+	1006	9	NNC	ENSMUSG00000068749.10	novel	1239	9	NA	NA	237	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	973.551544282582	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTAATAGTCTGTGATC	NA	False	NA	11	True	AATAAA	-15	NA	108164478	108187290	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr3_+_108164626_108169001_108169069_108172381_108172509_108173748_108173817_108175108_108175217_108175348_108175408_108176143_108176247_108179606_108179694_108187050
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111470	chr3	+	1660	8	FSM	ENSMUSG00000068744.13	ENSMUST00000102629.8	1687	8	-35	62	-15	-10	multi-exon	FALSE	canonical	3	155	junction_1	112.452983372553	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCTGTATATCTGAA	7017	False	NA	6	True	AATAAA	-14	NA	108291139	108295485	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_108291212_108291551_108291602_108291689_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111478	chr3	+	1684	8	FSM	ENSMUSG00000068744.13	ENSMUST00000090561.10	1686	8	-8	10	-8	-10	multi-exon	FALSE	canonical	3	329	junction_1	57.4402973103556	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCTGTATATCTGAA	7024	False	NA	6	True	AATAAA	-14	NA	108291146	108295485	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_108291243_108291551_108291602_108291689_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111499	chr3	-	1914	11	FSM	ENSMUSG00000068739.14	ENSMUST00000090553.12	3570	11	-41	1697	-30	50	multi-exon	FALSE	canonical	3	2549	junction_7	105.882198692698	820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTCTCCCTGGGCCTGA	NA	False	NA	0	True	NA	NA	NA	108352555	108333877	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111529	chr3	+	1299	4	FSM	ENSMUSG00000048100.14	ENSMUST00000143054.2	2443	4	-1	1145	0	8	multi-exon	FALSE	canonical	3	149	junction_1	10.4986771653491	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTGTTTGCTTGTTTGT	NA	False	NA	22	True	AATAAA	-31	NA	108479013	108489393	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_108479065_108480195_108480275_108485431_108485530_108488322
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111535	chr3	+	4166	15	FSM	ENSMUSG00000040389.16	ENSMUST00000051145.15	4222	15	56	0	-17	0	multi-exon	FALSE	canonical	3	33	junction_5	8.19064922297845	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCCTTTTCTCACGGTC	NA	False	NA	3	True	AATAAA	-18	NA	108498650	108553035	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_108498914_108517192_108517360_108518671_108518756_108521648_108521734_108525805_108526609_108530638_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111551	chr3	-	177	1	Intergenic	novelGene_3416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAATAACAGCACT	NA	False	NA	NA	False	NA	NA	NA	108506947	108506770	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_108506800_108506900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111555	chr3	-	186	1	Intergenic	novelGene_3417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATTGTGATCACAGG	5201	False	NA	NA	False	NA	NA	NA	108557230	108557044	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_108557000_108557200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111566	chr3	+	2033	12	FSM	ENSMUSG00000027884.17	ENSMUST00000106609.8	2043	12	10	0	10	0	multi-exon	TRUE	canonical	3	66	junction_1	36.8117839559091	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTCTGGTGTGCAGTC	6606	False	NA	6	True	AATAAA	-18	NA	108561238	108586156	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_108561297_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000_108584295_108585855
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111574	chr3	+	2087	12	NIC	ENSMUSG00000027884.17	novel	2224	13	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_1	23.1716555264122	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTCTGGTGTGCAGTC	6623	False	NA	6	True	AATAAA	-18	NA	108561255	108586156	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_+_108561368_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000_108584295_108585855
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111583	chr3	-	185	1	Intergenic	novelGene_3418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCTCTGACACATTTTC	NA	False	NA	NA	False	NA	NA	NA	108579726	108579541	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_108579500_108579700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111600	chr3	-	2467	19	FSM	ENSMUSG00000027882.19	ENSMUST00000102621.11	2419	19	-47	-1	-32	1	multi-exon	FALSE	canonical	1	38	junction_10	22.0233461984726	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTTTTTCTTTCTT	NA	False	NA	4	True	AATAAA	-18	NA	108747874	108700490	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_108701181_108702117_108702270_108704696_108704783_108706539_108706633_108707370_108707478_108708050_108708190_108709426_108709508_108710861_108710928_108712373_108712432_108712553_108712650_108717192_108717318_108720193_108720285_108723640_108723796_108729103_108729205_108729830_108729910_108733321_108733399_108734341_108734424_108734888_108734939_108747735
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111613	chr3	-	3042	6	FSM	ENSMUSG00000027881.15	ENSMUST00000029480.9	3026	6	-14	-2	-14	0	multi-exon	FALSE	canonical	3	234	junction_4	114.013332553697	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGGTGTTGGTTTCCCC	6836	False	NA	-7	True	AATAAA	-20	NA	108819057	108810120	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_108812079_108812426_108812651_108815102_108815164_108815247_108815400_108815651_108815721_108818479
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111631	chr3	-	3052	2	FSM	ENSMUSG00000049300.12	ENSMUST00000190378.2	3051	2	2	-3	2	0	multi-exon	FALSE	canonical	3	26	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTAACCTGGTCTATTCT	NA	False	NA	-5	True	AATAAA	-21	NA	110158307	110153424	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_110155172_110157002
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111649	chr3	+	157	1	FSM	ENSMUSG00000105509.2	ENSMUST00000197569.2	3692	1	1576	1959	1576	-1959	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCACTCGGTTCAAGTCA	NA	False	NA	NA	False	NA	NA	NA	110158906	110159063	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_110158900_110159100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111659	chr3	-	3457	15	FSM	ENSMUSG00000027981.15	ENSMUST00000092154.10	3888	15	34	397	34	0	multi-exon	FALSE	canonical	3	32	junction_1	23.6233195061532	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTCTAATTTTTCATTA	NA	False	NA	-1	True	AATAAA	-16	NA	113423764	113399112	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_113400949_113401988_113402061_113402686_113402820_113404706_113404766_113404857_113404953_113407406_113407566_113409011_113409161_113410396_113410523_113413673_113413817_113414757_113414827_113415480_113415593_113416014_113416099_113418587_113418707_113421993_113422042_113423511
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111668	chr3	-	202	1	Intergenic	novelGene_3419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCTTTGGGCCACAAACA	NA	False	NA	NA	False	NA	NA	NA	115087733	115087531	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_115087500_115087700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111675	chr3	+	194	1	Intergenic	novelGene_3420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGCCAAAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	115495519	115495713	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_115495500_115495700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111678	chr3	+	190	1	Intergenic	novelGene_3421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTAGTAGTAACTGAGTA	NA	False	NA	NA	False	NA	NA	NA	115499651	115499841	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_115499700_115499800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111686	chr3	+	1354	8	FSM	ENSMUSG00000033554.18	ENSMUST00000043342.10	1576	8	-22	244	-4	0	multi-exon	FALSE	canonical	3	254	junction_6	12.9331089117215	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTTTTATAATCTCC	7736	False	NA	8	True	AATAAA	-18	NA	115681809	115722737	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_115681927_115682088_115682247_115686360_115686486_115693343_115693453_115708688_115708810_115718860_115718901_115720345_115720450_115722157
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111710	chr3	-	1496	11	FSM	ENSMUSG00000000339.15	ENSMUST00000000348.15	1594	11	98	0	23	0	multi-exon	FALSE	canonical	3	261	junction_7	31.9274176844918	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGCTGCTGCTTTTTTA	NA	False	NA	0	True	AATAAA	-20	NA	116301759	116282611	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_116282988_116286631_116286737_116287731_116287827_116289284_116289344_116291238_116291364_116293194_116293337_116294760_116294820_116297993_116298118_116300483_116300628_116301399_116301501_116301593
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111718	chr3	+	178	1	Intergenic	novelGene_3422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAAAATCTCTTC	NA	False	NA	NA	False	NA	NA	NA	116302536	116302714	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_116302500_116302700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111728	chr3	+	3300	11	FSM	ENSMUSG00000000340.11	ENSMUST00000000349.11	3301	11	1	0	1	0	multi-exon	FALSE	canonical	3	173	junction_7	26.1091937830336	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTATGCCTTCATAGTA	NA	False	NA	10	True	AATAAA	-19	NA	116306719	116343630	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_116306841_116313885_116314010_116317000_116317077_116326903_116327086_116328393_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116339942_116340015_116341681
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111745	chr3	-	1861	11	ISM	ENSMUSG00000033439.13	ENSMUST00000041524.11	3402	12	19710	-4	10	4	3prime_fragment	FALSE	canonical	3	87	junction_7	13.8524366087703	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTGTGAGGCTTTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	116388526	116374737	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr3_-_116375260_116376142_116376573_116378844_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111770	chr3	-	2794	12	FSM	ENSMUSG00000089911.5	ENSMUST00000029570.9	2782	12	-11	-1	-11	1	multi-exon	FALSE	canonical	3	876	junction_3	57.2050104723397	809	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGATCTGTGAGTCCCT	NA	False	NA	0	True	AATAAA	-37	NA	116456337	116424811	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116456043
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111783	chr3	-	5340	8	FSM	ENSMUSG00000027957.14	ENSMUST00000029569.9	5725	8	386	-1	-7	1	multi-exon	FALSE	canonical	3	122	junction_1	23.3779941878019	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCAGTAGTTCCTCAGGA	2182	False	NA	-8	True	AATAAA	-21	NA	116505913	116463117	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116505731
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111793	chr3	-	209	1	ISM	ENSMUSG00000033400.15	ENSMUST00000040603.14	9625	34	67560	399	40644	-399	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCACAAAGATAAAACTCCA	NA	False	NA	NA	False	NA	NA	NA	116534255	116534046	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr3_-_116534000_116534300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111797	chr3	-	5142	34	FSM	ENSMUSG00000033400.15	ENSMUST00000040603.14	9625	34	-76	4559	-76	-1507	multi-exon	TRUE	canonical	3	13	junction_28	10.2172903022423	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATCTCTTTTTGGCTTTT	NA	False	NA	NA	False	AAAACA	-9	NA	116601891	116538206	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_116538585_116540028_116540163_116540265_116540354_116544046_116544145_116545633_116545846_116546899_116547013_116548521_116548658_116551887_116552000_116552339_116552566_116562434_116562538_116564988_116565165_116566035_116566170_116566412_116566550_116570177_116570309_116572267_116572403_116572703_116572817_116572904_116573030_116574374_116574526_116574640_116574797_116574891_116574994_116575236_116575401_116576168_116576293_116578101_116578290_116578708_116578849_116580178_116580277_116580367_116580471_116580878_116581003_116581919_116582032_116582174_116582357_116584654_116584859_116585666_116585834_116587260_116587472_116600916_116601067_116601676
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111805	chr3	+	192	1	Intergenic	novelGene_3423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTCTAGAGTTGTACAG	NA	False	NA	NA	False	NA	NA	NA	116546351	116546543	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_116546400_116546500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111817	chr3	+	194	1	FSM	ENSMUSG00000106037.2	ENSMUST00000196114.2	346	1	218	-66	218	66	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGTACCCTTCAAAATAG	NA	False	NA	58	True	NA	NA	NA	119503382	119503576	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_119503400_119503600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111835	chr3	+	189	1	Intergenic	novelGene_3424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	214	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCACAAAAGACAGTAAGGTA	NA	False	NA	NA	False	NA	NA	NA	119673627	119673816	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_119673600_119673800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111839	chr3	-	1040	5	FSM	ENSMUSG00000028133.18	ENSMUST00000106466.10	1484	5	0	444	0	1	multi-exon	FALSE	canonical	3	76	junction_3	13.1244047484067	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTCATGTTTACTTT	NA	False	NA	1	True	ATTAAA	-17	NA	120965344	120949490	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_120949707_120949835_120949952_120950049_120950166_120952416_120952905_120965240
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111848	chr3	-	179	1	Intergenic	novelGene_3425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAGTACATTAAAT	NA	False	NA	NA	False	NA	NA	NA	121006106	121005927	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_121005900_121006100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111854	chr3	+	202	1	Intergenic	novelGene_3426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGGAGGACAACCTGG	NA	False	NA	NA	False	NA	NA	NA	121040755	121040957	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_121040800_121041000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111860	chr3	-	146	1	Intergenic	novelGene_3427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCAAATGTTTCCCACC	NA	False	NA	NA	False	NA	NA	NA	121072424	121072278	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_121072300_121072400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111868	chr3	+	215	1	Intergenic	novelGene_3428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATATCTACCTTGGAGTCT	NA	False	NA	NA	False	TTTAAA	-3	NA	121178271	121178486	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_121178300_121178500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111874	chr3	+	2098	7	FSM	ENSMUSG00000053931.12	ENSMUST00000029773.13	2049	7	-49	0	-49	0	multi-exon	FALSE	canonical	3	4254	junction_2	486.023204750098	1902	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGGCTGGTTATTTTCT	NA	False	NA	27	True	AATAAA	-27	NA	121220096	121251856	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121245170_121245531_121245649_121248595_121248743_121250730
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111901	chr3	+	184	1	Intergenic	novelGene_3429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCTGCTCCTTAGGTTT	NA	False	NA	NA	False	NA	NA	NA	121410656	121410840	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_121410700_121410800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111919	chr3	-	3407	23	FSM	ENSMUSG00000028127.11	ENSMUST00000029770.8	3489	23	82	0	-23	0	multi-exon	TRUE	canonical	3	145	junction_14	20.5277981251709	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATGTGCCTGACCTTTT	7213	False	NA	-1	True	ATTAAA	-22	NA	121608869	121552555	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_121553959_121555063_121555121_121558649_121558755_121562270_121562391_121562815_121562906_121563000_121563067_121563163_121563242_121565951_121566016_121567637_121567711_121567790_121567883_121569079_121569172_121569265_121569364_121569450_121569521_121570645_121570716_121573203_121573347_121575576_121575634_121577659_121577784_121578121_121578220_121579650_121579721_121585382_121585472_121586452_121586552_121590097_121590135_121608657
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111931	chr3	-	199	1	Intergenic	novelGene_3430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTCAAGTGCATCTGAA	2788	False	NA	NA	False	NA	NA	NA	121720614	121720415	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_121720400_121720600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111940	chr3	+	4888	7	FSM	ENSMUSG00000028124.16	ENSMUST00000029769.14	5589	7	-52	753	-52	-753	multi-exon	FALSE	canonical	3	413	junction_2	51.1826793619352	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAGCCATAAAGCTATTC	NA	False	NA	NA	False	AATAAA	-19	NA	122039153	122063628	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_122039761_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111948	chr3	+	178	1	ISM	ENSMUSG00000028124.16	ENSMUST00000029769.14	5589	7	22532	2466	6310	1323	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAAATGAGTCTTT	NA	False	NA	NA	False	NA	NA	NA	122061737	122061915	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr3_+_122061700_122061900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111968	chr3	-	222	1	Intergenic	novelGene_3431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAATCATTGACAGTCT	NA	False	NA	NA	False	NA	NA	NA	122184587	122184365	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_122184400_122184600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111975	chr3	+	3344	12	FSM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	-33	0	-12	0	multi-exon	TRUE	canonical	3	116	junction_1	21.0877740616698	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCTCTTTATTATTGA	NA	False	NA	NA	False	AATATA	-22	NA	122213393	122323840	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_122213833_122220093_122220404_122248701_122248742_122298575_122298705_122301774_122302221_122304867_122304972_122305999_122306653_122312911_122313028_122316817_122316990_122318572_122318685_122318935_122319149_122323230
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111986	chr3	+	192	1	Intergenic	novelGene_3432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCTCAAGAAGTTTTAAG	63	False	NA	NA	False	NA	NA	NA	122266627	122266819	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_122266600_122266800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000111994	chr3	+	210	1	Intergenic	novelGene_3433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTTAGATAGCTAAGAAT	NA	False	NA	NA	False	AAAAAG	-12	NA	122327331	122327541	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_122327300_122327500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112024	chr3	+	5873	24	NNC	ENSMUSG00000039234.12	novel	3903	23	NA	NA	-2656	1	at_least_one_novel_splicesite	TRUE	canonical	3	16	junction_1	15.8213084042354	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTGTGTTTTATGTCTT	NA	False	NA	19	True	AATAAA	-19	NA	123058447	123159291	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr3_+_123058555_123059241_123061186_123063242_123063403_123072793_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112036	chr3	-	2620	11	FSM	ENSMUSG00000028114.17	ENSMUST00000029759.16	2741	11	125	-4	2	4	multi-exon	TRUE	canonical	3	213	junction_2	25.8534330408942	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTTCCTTAGATGCA	NA	False	NA	2	True	AATAAA	-21	NA	123179632	123161941	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_123163340_123164923_123165135_123166205_123166323_123167618_123167712_123168393_123168536_123169793_123169885_123173868_123173957_123174296_123174378_123176403_123176492_123177244_123177334_123179410
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112050	chr3	-	382	3	FSM	ENSMUSG00000104960.2	ENSMUST00000196466.2	448	3	66	0	-5	0	multi-exon	FALSE	canonical	3	427	junction_1	15.5	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGTCCTGTTTCTGGA	NA	False	NA	48	True	AATAAA	-21	NA	123301987	123301200	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_123301310_123301465_123301512_123301760
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112068	chr3	+	190	1	Intergenic	novelGene_3434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGATTGGACTTTCCTA	NA	False	NA	NA	False	NA	NA	NA	126664056	126664246	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_126664100_126664200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112077	chr3	-	216	1	Intergenic	novelGene_3435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTGGATGGTTTTAGCT	4775	False	NA	NA	False	NA	NA	NA	127236019	127235803	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_127235800_127236000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112082	chr3	+	220	1	Intergenic	novelGene_3436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGACAAAAAGGCCACCAA	NA	False	NA	NA	False	NA	NA	NA	127236330	127236550	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_127236300_127236600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112095	chr3	+	207	1	Intergenic	novelGene_3437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGGCACCTTGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	127251490	127251697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_127251500_127251700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112102	chr3	-	2129	13	FSM	ENSMUSG00000027968.12	ENSMUST00000029588.10	2121	13	-8	0	-8	0	multi-exon	FALSE	canonical	3	466	junction_6	145.639680948108	261	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTGGTTTTATTTACA	NA	False	NA	-1	True	AATAAA	-17	NA	127347006	127330362	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337802_127337928_127339474_127339620_127339695_127340053_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010_127341196_127346831
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112129	chr3	-	2682	10	FSM	ENSMUSG00000074238.7	ENSMUST00000051737.8	2662	10	-9	-11	3	6	multi-exon	FALSE	canonical	3	416	junction_8	26.3288791357173	257	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGCTTCATAATGGTCC	NA	False	NA	-5	True	AATAAA	-27	NA	127631169	127600649	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127609244_127609344_127610558_127610656_127614408_127614435_127616232_127616260_127616913_127616963_127630797
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112152	chr3	-	235	1	Intergenic	novelGene_3438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGATAAGTCTGTCCTC	NA	False	NA	NA	False	NA	NA	NA	129296120	129295885	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_129295900_129296100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112164	chr3	+	5951	5	FSM	ENSMUSG00000041220.11	ENSMUST00000071402.7	5951	5	0	0	0	0	multi-exon	FALSE	canonical	1	87	junction_1	129.619635858152	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTCTAGTTCTTTGTTG	NA	False	NA	17	True	AATAAA	-25	NA	129326034	129432144	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_129326145_129326296_129326418_129398689_129398822_129421931_129422084_129426708
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112175	chr3	-	189	1	Intergenic	novelGene_3439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAGAAGAAGT	NA	False	NA	NA	False	NA	NA	NA	129358448	129358259	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_129358300_129358400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112193	chr3	+	2464	2	ISM	ENSMUSG00000105960.2	ENSMUST00000199846.2	3871	5	4161	2	4161	-2	3prime_fragment	FALSE	canonical	3	92	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACACTGCAGCACTGTCTA	NA	False	NA	0	True	NA	NA	NA	129551567	129557531	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr3_+_129551788_129555287
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112205	chr3	-	1030	7	NNC	ENSMUSG00000028010.17	novel	1271	7	NA	NA	-197	0	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_6	620.417444593199	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTTATTGAACGGAACCTA	NA	False	NA	-1	True	AATAAA	-22	NA	129624778	129618560	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr3_-_129618859_129619196_129619266_129620472_129620624_129622553_129622614_129622985_129623141_129624243_129624503_129624740
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112207	chr3	-	1271	7	FSM	ENSMUSG00000028010.17	ENSMUST00000029643.15	1271	7	0	0	0	0	multi-exon	FALSE	canonical	3	868	junction_6	342.204130113397	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTTATTGAACGGAACCTA	NA	False	NA	-1	True	AATAAA	-22	NA	129625045	129618560	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_129618859_129619196_129619266_129620472_129620624_129622553_129622614_129622985_129623141_129624243_129624503_129624766
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112219	chr3	-	175	1	Intergenic	novelGene_3440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTCTTAAGG	9981	False	NA	1	True	NA	NA	NA	129668459	129668284	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_129668300_129668500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112245	chr3	+	1273	7	FSM	ENSMUSG00000027997.10	ENSMUST00000029626.9	1456	7	30	153	-3	-153	multi-exon	FALSE	canonical	3	125	junction_5	8.11206234909197	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACACTTTCTAATTCCTA	NA	False	NA	7	True	AATAAA	-16	NA	129695103	129707599	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_129695156_129699114_129699157_129699551_129699702_129700049_129700127_129704171_129704348_129705766_129705924_129706980
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112247	chr3	-	5093	24	FSM	ENSMUSG00000001052.16	ENSMUST00000001079.15	5128	24	35	0	35	0	multi-exon	FALSE	canonical	3	129	junction_20	16.4228159792433	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGAGTGCAATTTTATT	NA	False	NA	0	True	TATAAA	-22	NA	129854521	129776407	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129814186_129814292_129827479_129827624_129834322_129835097_129854217
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112263	chr3	-	1069	4	FSM	ENSMUSG00000041084.9	ENSMUST00000043937.9	1067	4	-2	0	-2	0	multi-exon	FALSE	canonical	3	1781	junction_1	135.7063823931	503	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGGACTTTTTGTTGT	NA	False	NA	1	True	AATAAA	-24	NA	130503095	130489560	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_130490128_130496964_130497163_130499598_130499693_130502885
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112279	chr3	-	469	5	FSM	ENSMUSG00000062006.13	ENSMUST00000079085.11	480	5	17	-6	17	1	multi-exon	FALSE	canonical	3	6284	junction_4	1283.0290331867	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTCCGTTATCTGTGATT	NA	False	NA	-13	True	AATAAA	-18	NA	130524030	130520481	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130522952_130523966
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112295	chr3	+	191	1	Intergenic	novelGene_3441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAGGAAGGAAGGAA	NA	False	NA	NA	False	TTTAAA	-3	NA	130529143	130529334	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_130529100_130529300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112306	chr3	-	178	1	Intergenic	novelGene_3442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACCTCTCCATATATAT	NA	False	NA	NA	False	NA	NA	NA	130673826	130673648	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_130673600_130673800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112309	chr3	+	198	1	Intergenic	novelGene_3443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAAGGCACAAAAGTATC	NA	False	NA	NA	False	NA	NA	NA	130856076	130856274	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_130856100_130856300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112321	chr3	-	196	1	Intergenic	novelGene_3444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATTTATTTATTTAAT	NA	False	NA	NA	False	NA	NA	NA	130992207	130992011	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_130992000_130992200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112331	chr3	+	190	1	Intergenic	novelGene_3445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCGAGAGAAGGGACTCGAA	NA	False	NA	NA	False	NA	NA	NA	130993046	130993236	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_130993000_130993200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112344	chr3	+	193	1	Antisense	novelGene_ENSMUSG00000027984.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTCCCCGTGTCCCACA	NA	False	NA	NA	False	NA	NA	NA	131040848	131041041	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr3_+_131040800_131041000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112360	chr3	-	1120	7	FSM	ENSMUSG00000028029.12	ENSMUST00000029663.11	1126	7	8	-2	8	2	multi-exon	FALSE	canonical	3	854	junction_6	52.4195150259477	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGCTCATTTTTTGTG	NA	False	NA	-14	True	AATAAA	-33	NA	132389637	132366257	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_132366503_132373145_132373315_132377739_132377949_132379725_132379891_132380509_132380624_132382765_132382900_132389553
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112380	chr3	-	3510	12	FSM	ENSMUSG00000028018.16	ENSMUST00000029651.11	3503	12	-7	0	-7	0	multi-exon	FALSE	canonical	3	158	junction_3	19.4795930515641	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGACTCCTCTCAGAT	NA	False	NA	-3	True	NA	NA	NA	132797593	132687512	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_132688981_132692145_132692216_132701926_132701958_132704585_132704720_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797340
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112392	chr3	+	3018	7	FSM	ENSMUSG00000028016.10	ENSMUST00000029650.9	3101	7	83	0	-15	0	multi-exon	FALSE	canonical	3	154	junction_1	13.0213499897497	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTGTAGATGTTTTTG	NA	False	NA	NA	False	AATAAA	-23	NA	132797683	132816749	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_132797738_132802508_132802674_132804170_132804324_132806383_132806569_132808117_132808278_132812699_132812847_132814595
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112409	chr3	-	176	1	Intergenic	novelGene_3446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATTAGAGCCAACAAATA	NA	False	NA	NA	False	NA	NA	NA	133096697	133096521	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_133096500_133096700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112421	chr3	-	9119	12	NNC	ENSMUSG00000040943.13	novel	9021	12	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_5	35.1295124450667	32	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCTGTTGCAGAGGTTT	NA	False	NA	-3	True	AATAAA	-26	NA	133250068	133169437	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133182394_133185102_133185127_133185893_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133219789_133219935_133249960
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112436	chr3	+	218	1	Intergenic	novelGene_3447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATAATTTGACTTAATA	NA	False	NA	NA	False	NA	NA	NA	133202016	133202234	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_133202000_133202200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112449	chr3	+	194	1	Intergenic	novelGene_3448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	639	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTGACTTTCCTGCCT	NA	False	NA	NA	False	NA	NA	NA	134770093	134770287	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_134770100_134770300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112487	chr3	+	3655	8	FSM	ENSMUSG00000078578.10	ENSMUST00000106291.10	1512	8	-2	-2141	-2	1	multi-exon	FALSE	canonical	2	536	junction_1	766.131549422427	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTCTTACTCAGTAATT	NA	False	NA	6	True	ATTAAA	-19	NA	135143992	135173960	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_135144114_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112508	chr3	+	3706	8	FSM	ENSMUSG00000078578.10	ENSMUST00000166033.6	2504	8	46	-1248	-3	0	multi-exon	FALSE	canonical	2	723	junction_1	704.867942473291	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGTCTTACTCAGTAAT	NA	False	NA	5	True	ATTAAA	-18	NA	135144286	135173959	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112512	chr3	+	3864	8	FSM	ENSMUSG00000078578.10	ENSMUST00000197859.5	3833	8	-31	0	1	0	multi-exon	FALSE	canonical	2	870	junction_1	657.273775778808	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGTCTTACTCAGTAAT	NA	False	NA	5	True	ATTAAA	-18	NA	135144294	135173959	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112535	chr3	+	3680	17	FSM	ENSMUSG00000028164.16	ENSMUST00000029814.10	3675	17	-5	0	-5	0	multi-exon	TRUE	canonical	3	85	junction_8	25.1755554804656	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCATTGAACACCATGTC	NA	False	NA	11	True	AATAAA	-19	NA	135191366	135277165	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_135191619_135212669_135212765_135216735_135216842_135217563_135217735_135223663_135223788_135228752_135228929_135230277_135230389_135248072_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112550	chr3	+	178	1	Intergenic	novelGene_3449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCCGGAGCGAGCAAGGAC	NA	False	NA	NA	False	NA	NA	NA	135418514	135418692	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_135418500_135418700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112558	chr3	+	179	1	Intergenic	novelGene_3450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCGACAGGAGTTTAAAATA	NA	False	NA	NA	False	NA	NA	NA	135474242	135474421	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_135474200_135474400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112571	chr3	+	2656	3	FSM	ENSMUSG00000046818.8	ENSMUST00000053855.8	2722	3	66	0	66	0	multi-exon	FALSE	canonical	3	67	junction_2	6.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTTGGCCTCTTTGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	137329498	137334094	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_137329645_137329892_137330035_137331726
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112575	chr3	+	174	1	Intergenic	novelGene_3451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACCTCATTCTCTCCTGG	NA	False	NA	NA	False	NA	NA	NA	137486473	137486647	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_137486500_137486600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112582	chr3	+	190	1	Intergenic	novelGene_3452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATCTGAACAGGGAACTT	NA	False	NA	NA	False	NA	NA	NA	137547691	137547881	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_137547700_137547900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112597	chr3	+	803	5	FSM	ENSMUSG00000037894.14	ENSMUST00000174561.8	810	5	13	-6	-5	6	multi-exon	FALSE	canonical	3	143	junction_3	6290.0667921732	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTAAACTTGCTTAATAA	NA	False	NA	3	True	AATAAA	-18	NA	137570346	137572585	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_137570458_137570893_137570972_137571280_137571395_137571840_137571902_137572146
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112600	chr3	+	1406	4	NIC	ENSMUSG00000037894.14	novel	1069	5	NA	NA	-5	0	intron_retention	FALSE	canonical	3	14112	junction_3	709.278663306759	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGTGGTACTTTTGTTGT	NA	False	NA	32	True	ATTAAA	-21	NA	137570346	137572683	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_+_137570972_137571280_137571395_137571771_137571902_137572146
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112608	chr3	+	1648	3	FSM	ENSMUSG00000037894.14	ENSMUST00000138010.3	870	3	-391	-387	-2	0	multi-exon	FALSE	canonical	3	14469	junction_2	647	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGTGGTACTTTTGTTGT	NA	False	NA	32	True	ATTAAA	-21	NA	137570349	137572683	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_137570972_137571280_137571395_137571771
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112625	chr3	+	200	1	ISM	ENSMUSG00000074212.8	ENSMUST00000090178.10	9477	8	46383	2300	8828	-2300	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCAGGTCAGGTCTTCAC	NA	False	NA	NA	False	NA	NA	NA	137619818	137620018	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr3_+_137619800_137620000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112629	chr3	+	207	1	ISM	ENSMUSG00000074212.8	ENSMUST00000090178.10	9477	8	46798	1878	9243	-1878	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAAGCAGCTCAAC	NA	False	NA	NA	False	NA	NA	NA	137620233	137620440	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr3_+_137620200_137620400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112635	chr3	+	1326	7	FSM	ENSMUSG00000091512.6	ENSMUST00000168345.6	1295	7	-29	-2	-9	2	multi-exon	FALSE	canonical	3	124	junction_3	73.5090697351921	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCTGTATAGGCCTCT	51	False	NA	4	True	AATAAA	-24	NA	137624257	137634528	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_137624425_137624633_137624680_137625681_137625717_137630872_137630932_137632569_137632704_137633107_137633172_137633707
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112650	chr3	+	2484	8	NNC	ENSMUSG00000004127.13	novel	4025	8	NA	NA	-8	-1541	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.2811814618978	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTCTAAAATTCAGGTTT	NA	False	NA	4	True	AATAAA	-19	NA	137849200	137864038	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr3_+_137849353_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112661	chr3	+	2440	8	FSM	ENSMUSG00000004127.13	ENSMUST00000040321.13	4025	8	41	1544	20	-1541	multi-exon	FALSE	canonical	3	147	junction_7	16.9609395196067	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTCTAAAATTCAGGTTT	NA	False	NA	4	True	AATAAA	-19	NA	137849249	137864038	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_137849358_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112675	chr3	+	1449	9	FSM	ENSMUSG00000028138.9	ENSMUST00000005964.7	1604	9	-24	179	-24	77	multi-exon	FALSE	canonical	3	1845	junction_1	151.305103598656	214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAGTTGAACATCTTG	4900	False	NA	21	True	AATAAA	-18	NA	138148829	138161081	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_138148955_138151050_138151153_138152843_138152986_138153612_138153701_138156659_138156880_138157004_138157266_138159502_138159639_138160428_138160568_138160845
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112713	chr3	+	3157	8	FSM	ENSMUSG00000028152.11	ENSMUST00000029800.9	6653	8	24	3472	24	7	multi-exon	FALSE	canonical	3	131	junction_4	20.1990098767242	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGTCGTCTTACTTTTTC	4849	False	NA	26	True	AATAAA	-39	NA	138447979	138610194	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_138448422_138574106_138574158_138596495_138596643_138600108_138600280_138602549_138602676_138603873_138603922_138604027_138604145_138608139
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112728	chr3	-	222	1	Intergenic	novelGene_3453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	138569531	138569309	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_138569300_138569500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112734	chr3	-	169	1	Intergenic	novelGene_3454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAGAAGAAAAAGAGGG	NA	False	NA	NA	False	NA	NA	NA	138572017	138571848	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_138571800_138572000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112738	chr3	-	3543	14	FSM	ENSMUSG00000028149.13	ENSMUST00000029796.11	3383	14	-155	-5	-24	1	multi-exon	FALSE	canonical	3	34	junction_10	15.970386796752	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGATTACTTGGTTTCTT	NA	False	NA	-5	True	AATAAA	-22	NA	138780986	138631665	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_138633474_138647490_138647620_138651423_138651551_138661082_138661223_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138721306_138721433_138727573_138727697_138756241_138756350_138780796
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112740	chr3	-	3706	15	FSM	ENSMUSG00000028149.13	ENSMUST00000098574.9	3669	15	-40	3	-40	1	multi-exon	FALSE	canonical	3	58	junction_10	10.7892614791424	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGATTACTTGGTTTCTT	NA	False	NA	-5	True	AATAAA	-22	NA	138781002	138631665	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_138633474_138647490_138647620_138651423_138651551_138661082_138661223_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138689482_138689630_138721306_138721433_138727573_138727697_138756241_138756350_138780796
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112752	chr3	+	194	1	Intergenic	novelGene_3455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATAGCTGTTGAACAATTT	NA	False	NA	NA	False	NA	NA	NA	140464965	140465159	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_140465000_140465200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112763	chr3	-	5005	13	FSM	ENSMUSG00000028273.16	ENSMUST00000029941.16	5016	13	16	-5	16	5	multi-exon	FALSE	canonical	3	150	junction_4	21.3476514451174	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGGCCTTTTTTTTTCC	7019	False	NA	1	True	AATAAA	-24	NA	142101438	141945345	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983763_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101346
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112788	chr3	+	1695	13	NNC	ENSMUSG00000040213.14	novel	734	7	NA	NA	-10297	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	24.2674622122344	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCCGTGTTGTACTTTC	NA	False	NA	23	True	AATACA	-37	NA	142418578	142450099	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr3_+_142418803_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112795	chr3	+	203	2	Intergenic	novelGene_3456	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCTTCTAAATCTTAAG	NA	False	NA	NA	False	NA	NA	NA	142458919	142466758	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_142458948_142466583
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112809	chr3	-	185	1	Intergenic	novelGene_3457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTTAGAAGAGTTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	142466758	142466573	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_142466600_142466800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112820	chr3	+	189	1	Intergenic	novelGene_3458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTACATATGGTATGGTGA	NA	False	NA	NA	False	NA	NA	NA	142477701	142477890	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_142477700_142477900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112824	chr3	-	5601	22	FSM	ENSMUSG00000004591.17	ENSMUST00000043812.15	6207	22	-8	614	-8	-614	multi-exon	FALSE	canonical	3	374	junction_13	40.9391451479165	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTTTAAGTTTTCAT	NA	False	NA	0	True	NA	NA	NA	142587773	142497276	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112832	chr3	-	1717	7	ISM	ENSMUSG00000004591.17	ENSMUST00000172521.8	2510	16	0	16513	0	7	5prime_fragment	FALSE	canonical	3	467	junction_2	29.0975371237269	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAATATCACTCTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	142587751	142527062	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr3_-_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112845	chr3	-	185	1	Intergenic	novelGene_3459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATAAAAGTTATGTACAG	NA	False	NA	NA	False	NA	NA	NA	143889562	143889377	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_143889400_143889600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112855	chr3	-	2480	7	FSM	ENSMUSG00000040151.10	ENSMUST00000043325.9	6177	7	-40	3737	-40	-3737	multi-exon	FALSE	canonical	3	89	junction_1	15.667553166408	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGTATTTCTCGTTTAA	NA	False	NA	-7	True	AGTAAA	-22	NA	144275982	144139203	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_144140476_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144275494
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112914	chr3	+	174	1	Intergenic	novelGene_3460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAGGAACTATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	145337172	145337346	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_145337200_145337300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112918	chr3	-	2021	5	FSM	ENSMUSG00000028195.5	ENSMUST00000029846.5	2019	5	0	-2	0	2	multi-exon	FALSE	canonical	3	41	junction_2	2.58602010819715	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGTATGTTGTTTGG	NA	False	NA	NA	False	AATAAA	-18	NA	145355736	145352728	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_145353724_145353951_145354167_145354287_145354633_145354976_145355191_145355484
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112931	chr3	+	3766	6	FSM	ENSMUSG00000028194.16	ENSMUST00000029845.15	3764	6	-1	-1	-1	1	multi-exon	FALSE	canonical	3	249	junction_5	17.0105849399719	188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTAGTGTCTGTCTCGTT	NA	False	NA	10	True	AATAAA	-19	NA	145464428	145600033	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_145464920_145551459_145551560_145558005_145558080_145558911_145559032_145594838_145594983_145597196
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112945	chr3	+	412	1	FSM	ENSMUSG00000105388.2	ENSMUST00000197973.2	321	1	-32	-59	-32	59	mono-exon	FALSE	NA	NA	NA	NA	NA	696	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTTCTCTCACAGAGGACC	8269	False	NA	NA	False	AATAAA	-34	NA	145584742	145585154	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_145584700_145585200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112949	chr3	+	1860	3	FSM	ENSMUSG00000028191.12	ENSMUST00000029842.9	1949	3	18	71	18	-71	multi-exon	FALSE	canonical	3	334	junction_2	11.5	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTGTCTGAGTCAGAAA	NA	False	NA	16	True	NA	NA	NA	145630034	145640040	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_145630271_145636160_145636450_145638705
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112958	chr3	+	1545	3	FSM	ENSMUSG00000036873.14	ENSMUST00000039571.14	1547	3	7	-5	7	5	multi-exon	FALSE	canonical	3	242	junction_2	10.5	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGCATCTTGTTTATTTG	NA	False	NA	10	True	ATTAAA	-24	NA	145643775	145650589	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_145644084_145644652_145644852_145649551
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112980	chr3	+	203	1	Intergenic	novelGene_3461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCTTTGGTCATGGTA	NA	False	NA	NA	False	NA	NA	NA	145679547	145679750	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_145679500_145679800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112988	chr3	+	5599	7	FSM	ENSMUSG00000036863.13	ENSMUST00000039517.11	5495	7	-104	0	-104	0	multi-exon	FALSE	canonical	3	28	junction_1	22.9685775692696	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTATTGTAATTGATTT	NA	False	NA	5	True	ATTAAA	-16	NA	145693520	145727475	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_145694925_145704220_145704866_145707077_145708169_145712770_145712898_145720012_145720195_145721350_145721583_145725557
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000112998	chr3	-	182	1	Intergenic	novelGene_3462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTTTAAAAAAATGATTTA	9648	False	NA	NA	False	NA	NA	NA	146098421	146098239	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_-_146098200_146098400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113002	chr3	+	3456	14	FSM	ENSMUSG00000036825.13	ENSMUST00000106153.9	3446	14	-10	0	-10	0	multi-exon	FALSE	canonical	3	150	junction_1	20.2423190195674	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGTTGTCCATTCAC	NA	False	NA	22	True	ATTAAA	-24	NA	146110386	146145899	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_146110540_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113004	chr3	+	3448	14	FSM	ENSMUSG00000036825.13	ENSMUST00000039021.11	3410	14	-27	-11	-5	0	multi-exon	FALSE	canonical	3	67	junction_10	37.3226774028969	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGTTGTCCATTCAC	NA	False	NA	22	True	ATTAAA	-24	NA	146110391	146145899	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_146110540_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138730_146138902_146142297_146142413_146142930_146143097_146144410
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113027	chr3	+	213	1	Intergenic	novelGene_3463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATTAAGGCAAATTTCT	2023	False	NA	NA	False	NA	NA	NA	146152293	146152506	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_146152300_146152500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113033	chr3	+	584	3	FSM	ENSMUSG00000068523.13	ENSMUST00000090031.12	593	3	-13	22	-13	2	multi-exon	FALSE	canonical	3	3573	junction_2	41.5	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTCCTTACTGATGTGA	NA	False	NA	4	True	AATAAA	-17	NA	146205548	146211305	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_146205776_146209014_146209155_146211088
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113054	chr3	-	4395	10	FSM	ENSMUSG00000005034.16	ENSMUST00000102515.10	4347	10	-48	0	-18	0	multi-exon	FALSE	canonical	3	142	junction_1	11.8415464455544	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATTGAGTCTTCTGTCCG	2650	False	NA	NA	False	ATTAAA	-20	NA	146518763	146435328	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_146438469_146443688_146443854_146451014_146451138_146452354_146452451_146453675_146453803_146456237_146456321_146457201_146457301_146461386_146461516_146463461_146463524_146518392
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113062	chr3	+	192	1	Intergenic	novelGene_3464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGAACAGGTTGACACC	NA	False	NA	NA	False	NA	NA	NA	148367775	148367967	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_148367800_148368000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113076	chr3	+	2693	20	FSM	ENSMUSG00000028034.16	ENSMUST00000196695.5	2374	20	-60	-259	-14	241	multi-exon	FALSE	canonical	1	416	junction_13	300.522177130688	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTAGTATACTTCCATTG	NA	False	NA	26	True	ATTAAA	-22	NA	151916095	151938667	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113105	chr3	+	2480	21	NIC	ENSMUSG00000028034.16	novel	2374	20	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	463.709486100942	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	NA	False	NA	25	True	AATAAA	-15	NA	151916112	151938408	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113114	chr3	+	2465	21	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	466.001960832784	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCGGTAAGTTGGATAT	NA	False	NA	26	True	AATAAA	-16	NA	151916116	151938409	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113141	chr3	-	4972	16	FSM	ENSMUSG00000054942.14	ENSMUST00000073089.13	4965	16	8	-15	6	15	multi-exon	TRUE	canonical	3	131	junction_7	24.7194030852059	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTCACTTTGTTCTTA	NA	False	NA	-19	True	AATAAA	-28	NA	152046036	151979470	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113151	chr3	+	3921	24	FSM	ENSMUSG00000025437.16	ENSMUST00000197748.5	4183	24	-17	279	-6	5	multi-exon	FALSE	canonical	3	245	junction_13	66.1683137664235	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTGAATTTATTTG	NA	False	NA	NA	False	AATAAA	-22	NA	152052108	152098975	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113158	chr3	+	3884	24	FSM	ENSMUSG00000025437.16	ENSMUST00000117492.9	3886	24	3	-1	3	1	multi-exon	FALSE	canonical	3	273	junction_13	62.1055263911158	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTGAATGTTGAATTTA	NA	False	NA	NA	False	AATAAA	-18	NA	152052117	152098971	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113178	chr3	+	7632	14	FSM	ENSMUSG00000039068.17	ENSMUST00000106100.9	7607	14	-25	0	-25	0	multi-exon	FALSE	canonical	3	170	junction_1	24.8676972569618	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTTCCATTTATTTC	NA	False	NA	13	True	AATAAA	-15	NA	152101614	152168463	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113198	chr3	+	4206	14	FSM	ENSMUSG00000039068.17	ENSMUST00000106101.2	7539	14	-16	3349	-6	0	multi-exon	FALSE	canonical	0	0	junction_1	63.1683202752023	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCTTGTTGTGGATTCC	NA	False	NA	20	True	AATAAA	-29	NA	152102314	152165114	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_152102399_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113205	chr3	+	1568	11	FSM	ENSMUSG00000039047.18	ENSMUST00000159899.8	4737	11	-6	3175	-6	3	multi-exon	FALSE	canonical	3	317	junction_8	39.6252444787411	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTGTGTGTGCTGTCTTG	3951	False	NA	36	True	AGTAAA	-40	NA	152419730	152491488	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113216	chr3	-	2236	2	ISM	ENSMUSG00000052544.10	ENSMUST00000199707.2	416	3	19055	-1899	19055	1899	3prime_fragment	FALSE	canonical	3	111	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGCGTTGTTTTCTCTC	NA	False	NA	-4	True	AATAAA	-24	NA	152912365	152909103	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr3_-_152911229_152912254
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113217	chr3	-	2353	3	NNC	ENSMUSG00000052544.10	novel	416	3	NA	NA	-134274	1899	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	46	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGCGTTGTTTTCTCTC	NA	False	NA	-4	True	AATAAA	-24	NA	153065694	152909103	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr3_-_152911229_152912254_152912363_153065574
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113229	chr3	+	202	1	Intergenic	novelGene_3465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTTGTAAGTGTGCACCTG	4331	False	NA	NA	False	NA	NA	NA	152925484	152925686	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_152925500_152925700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113233	chr3	+	217	1	Intergenic	novelGene_3466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTGTCATAGGCATGAG	NA	False	NA	NA	False	NA	NA	NA	153514528	153514745	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_153514500_153514700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113245	chr3	+	223	1	Intergenic	novelGene_3467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	153544825	153545048	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_153544800_153545000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113253	chr3	+	199	1	Intergenic	novelGene_3468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGGCTGTATTCCTGTC	NA	False	NA	NA	False	NA	NA	NA	153595247	153595446	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_153595200_153595400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113264	chr3	-	1578	9	FSM	ENSMUSG00000065463.3_ENSMUSG00000038975.15	ENSMUST00000200209.5	1169	9	-124	-285	-1	0	multi-exon	FALSE	canonical	3	607	junction_3	165.057565715722	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTATATAGCTTTTT	6904	False	NA	0	True	AATAAA	-17	NA	153617842	153612923	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113269	chr3	-	2309	9	FSM	ENSMUSG00000065463.3_ENSMUSG00000038975.15	ENSMUST00000196266.5	1271	9	-871	-167	3	0	multi-exon	FALSE	canonical	3	426	junction_3	203.564140690348	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTATATAGCTTTTT	6157	False	NA	0	True	AATAAA	-17	NA	153618589	153612923	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113288	chr3	-	1462	8	FSM	ENSMUSG00000065463.3_ENSMUSG00000038975.15	ENSMUST00000196956.5	1055	8	-124	-283	-1	0	multi-exon	FALSE	canonical	3	355	junction_5	265.52827590696	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6904	False	NA	-2	True	AATAAA	-15	NA	153617842	153612925	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113292	chr3	-	1442	10	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_9	287.574145028528	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6157	False	NA	-2	True	AATAAA	-15	NA	153618589	153612925	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618550
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113334	chr3	+	179	1	Intergenic	novelGene_3469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGCTCTCGGGCTGGAG	NA	False	NA	NA	False	NA	NA	NA	153624911	153625090	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_153624900_153625100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113338	chr3	-	2067	12	FSM	ENSMUSG00000062908.13	ENSMUST00000072697.13	2047	12	-18	-2	-18	2	multi-exon	TRUE	canonical	3	875	junction_11	59.2580851965116	279	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTGACTCTCCAGGTT	NA	False	NA	-4	True	AATAAA	-18	NA	153650287	153627991	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_153628640_153631301_153631551_153635167_153635264_153635853_153635995_153638663_153638773_153641931_153642063_153643339_153643421_153644190_153644292_153644533_153644604_153644706_153644805_153647519_153647608_153650032
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113359	chr3	+	2051	9	FSM	ENSMUSG00000028199.19	ENSMUST00000029850.15	2507	9	456	0	23	0	multi-exon	FALSE	canonical	3	139	junction_1	25.4447931805311	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTGTCTGTCTCGTGTG	NA	False	NA	18	True	AGTAAA	-18	NA	154302803	154328819	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_154302922_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327733
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113378	chr3	+	2947	10	FSM	ENSMUSG00000028180.19	ENSMUST00000106058.8	2924	10	-41	18	-41	16	multi-exon	TRUE	canonical	3	697	junction_8	81.8057017542553	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCTAAACTCATAATAGC	NA	False	NA	19	True	AATAAA	-27	NA	157239755	157254029	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113386	chr3	+	2736	11	FSM	ENSMUSG00000028180.19	ENSMUST00000106057.8	2737	11	-34	35	-5	5	multi-exon	FALSE	canonical	3	77	junction_9	297.644569915193	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTGTTGTTTATTAGAA	NA	False	NA	16	True	AATAAA	-17	NA	157239990	157253978	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157251711_157251787_157252311
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113399	chr3	+	178	1	Intergenic	novelGene_3470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGAACTTAGTTC	NA	False	NA	NA	False	NA	NA	NA	157400301	157400479	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr3_+_157400300_157400500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113405	chr3	-	1831	12	FSM	ENSMUSG00000028179.13	ENSMUST00000118539.2	1815	12	-16	0	-16	0	multi-exon	FALSE	canonical	3	948	junction_5	60.9754048777046	246	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCCTGATCCTACTTT	NA	False	NA	-16	True	AATAAA	-18	NA	157630730	157599884	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_157600465_157602828_157602968_157610781_157610835_157611819_157611942_157612956_157613110_157614535_157614614_157616519_157616578_157619236_157619369_157624062_157624173_157625653_157625750_157626591_157626674_157630502
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113418	chr3	-	220	1	Antisense	novelGene_ENSMUSG00000028177.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCGACTTCCCAGGTACA	NA	False	NA	NA	False	NA	NA	NA	157631385	157631165	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr3_-_157631200_157631400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113429	chr3	+	4342	13	FSM	ENSMUSG00000039988.15	ENSMUST00000040787.13	3903	13	-439	0	-264	0	multi-exon	FALSE	canonical	3	283	junction_4	30.2143959433615	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGTGCCTATTAATCC	NA	False	NA	15	True	AATAAA	-23	NA	157652611	157713671	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113449	chr3	-	2660	12	FSM	ENSMUSG00000055436.19	ENSMUST00000072875.15	2654	12	-2	-4	-2	4	multi-exon	TRUE	canonical	3	573	junction_1	36.7913482463625	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGTAGAGCTGGGTT	NA	False	NA	-23	True	AATAAA	-21	NA	157737405	157716551	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113451	chr3	-	2666	13	FSM	ENSMUSG00000055436.19	ENSMUST00000121326.8	3106	13	-2	442	-2	4	multi-exon	FALSE	canonical	3	316	junction_12	95.9239788698437	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGTAGAGCTGGGTT	NA	False	NA	-23	True	AATAAA	-21	NA	157742278	157716551	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088_157737286_157742152
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113504	chr3	+	4104	15	FSM	ENSMUSG00000063052.10	ENSMUST00000072080.10	4142	15	38	0	0	0	multi-exon	TRUE	canonical	3	641	junction_2	81.4479926714224	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTGTAGTGTGTTTGT	NA	False	NA	NA	False	AATAAA	-24	NA	157742336	157774124	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113512	chr3	+	4030	14	NIC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	146	junction_2	190.962278254048	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTGTAGTGTGTTTGT	NA	False	NA	NA	False	AATAAA	-24	NA	157742336	157774124	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr3_+_157742514_157746077_157746260_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113518	chr3	+	2820	16	NNC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_6	282.785871091342	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTATAGTGTTTTTGTTT	NA	False	NA	30	True	AATAAA	-45	NA	157742337	157772727	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157755737_157755852_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113521	chr3	+	2450	13	FSM	ENSMUSG00000063052.10	ENSMUST00000156597.8	2450	13	1	-1	1	1	multi-exon	FALSE	canonical	3	70	junction_1	215.046296694973	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTATAGTGTTTTTGTTT	NA	False	NA	30	True	AATAAA	-45	NA	157742337	157772727	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr3_+_157742514_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113564	chr4	-	2410	8	FSM	ENSMUSG00000028232.14	ENSMUST00000029891.12	2690	8	44	236	0	-236	multi-exon	FALSE	canonical	3	50	junction_4	11.6233403467474	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTCTAGTAAAAATGTTAT	-11	True	NA	NA	False	AATAAA	-17	NA	3574809	3549276	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_3550580_3551751_3551892_3554353_3554415_3560498_3560693_3564092_3564258_3569363_3569753_3570320_3570373_3574703
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113566	chr4	-	2400	8	NNC	ENSMUSG00000028232.14	novel	2773	9	NA	NA	0	-236	intron_retention	FALSE	canonical	0	0	junction_6	25.7840323946937	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTCTAGTAAAAATGTTAT	-11	True	NA	NA	False	AATAAA	-17	NA	3574809	3549276	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_-_3550580_3551751_3551892_3554353_3554415_3560498_3560693_3564092_3564258_3569363_3569753_3570330_3570373_3574703
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113573	chr4	+	2948	13	FSM	ENSMUSG00000042228.15	ENSMUST00000041377.13	3463	13	-21	536	-21	-535	multi-exon	FALSE	canonical	3	29	junction_2	7.08823359911026	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTTGTCTTGTGTATCA	4	True	NA	20	True	AATACA	-17	NA	3678093	3791077	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_3678365_3738724_3738862_3742441_3742488_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113593	chr4	-	159	1	ISM	ENSMUSG00000028234.7	ENSMUST00000138502.2	3706	4	1037	3136	605	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGGCTTTTGTTCAG	970	False	NA	-37	True	AATAAA	-18	NA	3834628	3834469	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_-_3834500_3834600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113594	chr4	-	497	3	FSM	ENSMUSG00000028234.7	ENSMUST00000103009.5	582	3	88	-3	88	0	multi-exon	FALSE	canonical	3	6653	junction_2	831.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGGCTTTTGTTCAG	198	False	NA	-37	True	AATAAA	-18	NA	3835400	3834469	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_3834684_3834935_3835010_3835191
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113611	chr4	-	6547	5	FSM	ENSMUSG00000066324.3	ENSMUST00000084949.3	6543	5	-4	0	-4	0	multi-exon	FALSE	canonical	3	157	junction_3	6.90561365846657	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATGCTGTGTTGGTGTTT	-31	True	NA	-4	True	AATAAA	-22	NA	4793359	4762483	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_4767973_4769311_4769474_4776313_4776410_4778192_4778356_4792722
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113649	chr4	+	2090	9	FSM	ENSMUSG00000028249.16	ENSMUST00000029912.11	2745	9	30	625	3	4	multi-exon	FALSE	canonical	3	359	junction_4	40.7944542799631	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGTCTGTGCCTGCATC	-2	True	NA	17	True	ATTAAA	-22	NA	6365679	6395659	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_6365760_6377076_6377143_6378965_6379048_6380989_6381100_6385025_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113659	chr4	-	3538	31	FSM	ENSMUSG00000028245.16	ENSMUST00000029910.12	3507	31	-31	0	-31	0	multi-exon	FALSE	canonical	3	82	junction_12	11.571804814577	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTCTTATCTTATTTAAA	-6	True	NA	NA	False	ATTAAA	-21	NA	6454302	6396206	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398960_6406786_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417208_6417745_6417878_6418260_6418382_6418471_6418524_6419863_6419928_6420049_6420141_6421056_6421137_6423321_6423499_6424878_6424988_6426401_6426474_6428391_6428522_6432679_6432733_6432829_6432878_6433262_6433335_6435056_6435108_6437741_6437779_6437853_6437922_6438042_6438122_6440899_6440990_6453984
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113668	chr4	-	202	1	Intergenic	novelGene_3471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTTTAAAAAGATTCATG	NA	False	NA	NA	False	NA	NA	NA	6517070	6516868	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_6516900_6517100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113672	chr4	+	3428	1	Intergenic	novelGene_3472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGGTCGCGTCGTTCTT	NA	False	NA	NA	False	NA	NA	NA	8133522	8136950	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_8133500_8137000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113677	chr4	-	1938	9	FSM	ENSMUSG00000041261.10	ENSMUST00000066674.8	3853	9	1	1914	1	-1914	multi-exon	FALSE	canonical	3	29	junction_2	2.31503239718152	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGCACTCTCAATTTGG	0	True	NA	NA	False	AATAAA	-19	NA	8239040	8145275	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_8146217_8169595_8169766_8183252_8183366_8184583_8184633_8185575_8185639_8189296_8189393_8221549_8221675_8237918_8238111_8238851
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113694	chr4	+	168	1	Intergenic	novelGene_3473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGCCAGAGCAAGTGCCC	NA	False	NA	NA	False	NA	NA	NA	8729492	8729660	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_8729500_8729700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113700	chr4	-	6651	24	FSM	ENSMUSG00000028207.19	ENSMUST00000078139.13	6694	24	45	-2	-31	2	multi-exon	TRUE	canonical	0	0	junction_21	108.084473020543	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATGTTTTGTGTTTTGT	NA	False	NA	NA	False	AATAAA	-32	NA	9669117	9449076	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113711	chr4	-	4396	23	FSM	ENSMUSG00000028207.19	ENSMUST00000108340.9	6646	23	45	2205	-31	-2205	multi-exon	FALSE	canonical	0	0	junction_20	115.972932507461	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCCTCGCTCTTACTTG	NA	False	NA	1	True	AATAAA	-22	NA	9669117	9451283	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113725	chr4	-	2844	14	FSM	ENSMUSG00000028207.19	ENSMUST00000084915.11	2884	14	45	-5	-31	5	multi-exon	FALSE	canonical	0	0	junction_11	124.875606744325	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTCATTATTTTGAACT	NA	False	NA	1	True	AATAAA	-22	NA	9669117	9575261	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113733	chr4	-	2759	13	FSM	ENSMUSG00000028207.19	ENSMUST00000108337.8	2836	13	78	-1	2	1	multi-exon	FALSE	canonical	0	0	junction_10	142.503411265212	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGATTGTCATTATTTTG	6	True	NA	-3	True	AATAAA	-18	NA	9669084	9575265	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113746	chr4	+	719	1	FSM	ENSMUSG00000066315.10	ENSMUST00000120234.2	636	1	-28	-55	-28	55	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTTCAGGCATGATTTA	-8	True	NA	NA	False	AATAAA	-31	NA	10848391	10849110	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_10848400_10849100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113750	chr4	+	2132	6	FSM	ENSMUSG00000059482.16	ENSMUST00000080517.14	2116	6	-12	-4	-12	0	multi-exon	FALSE	canonical	3	121	junction_4	10.0079968025574	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCTCTGTGCAATTAT	NA	False	NA	15	True	AATAAA	-19	NA	10874485	10899425	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_10874773_10879522_10879611_10881800_10881869_10882406_10882473_10893262_10893359_10897898
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113760	chr4	+	192	1	Intergenic	novelGene_3474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACTGGCTGCTTTTCTA	NA	False	NA	NA	False	NA	NA	NA	10909294	10909486	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_10909300_10909500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113766	chr4	-	3000	2	FSM	ENSMUSG00000049969.4	ENSMUST00000054776.4	2977	2	-23	0	-23	0	multi-exon	FALSE	canonical	3	844	junction_1	0	329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTTTTTATATTG	NA	False	NA	-1	True	AATAAA	-17	NA	11007699	10988661	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_10991355_11007392
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113774	chr4	-	216	1	Intergenic	novelGene_3475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2869	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTCTGATGACCAAAGT	NA	False	NA	1	True	NA	NA	NA	11046165	11045949	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_11045900_11046200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113784	chr4	-	1085	9	FSM	ENSMUSG00000050323.15	ENSMUST00000058183.9	1082	9	0	-3	0	3	multi-exon	TRUE	canonical	0	0	junction_7	119.468549731718	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTCTGAGTTTTTTT	-19	True	NA	0	True	TTTAAA	-6	NA	11076204	11051041	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_11051226_11053431_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11066650_11066708_11070199_11070323_11073143_11073244_11075979
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113792	chr4	-	956	9	NNC	ENSMUSG00000050323.15	novel	675	6	NA	NA	-5	-802	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	143.326550227095	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGAGCGTCACAGCACA	-25	True	NA	NA	False	NA	NA	NA	11076210	11052014	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_-_11052064_11053431_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11066650_11066708_11070199_11070323_11073143_11073244_11075979
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113799	chr4	+	233	1	Intergenic	novelGene_3476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATACAGCTGATCAAAATT	9058	False	NA	NA	False	TTTAAA	-11	NA	11114454	11114687	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_11114500_11114700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113803	chr4	+	211	1	Intergenic	novelGene_3477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	353	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTTTTTATGTAGTCGA	NA	False	NA	NA	False	NA	NA	NA	11121835	11122046	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_11121800_11122000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113815	chr4	-	235	1	Intergenic	novelGene_3478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCCCGTAAGAATCGCTA	9888	False	NA	NA	False	AAGAAA	-38	NA	11146362	11146127	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_11146100_11146400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113823	chr4	+	5410	4	FSM	ENSMUSG00000028211.12	ENSMUST00000029865.4	5404	4	-6	0	-6	0	multi-exon	FALSE	canonical	3	122	junction_3	56.8409085860605	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGGAGGATTCTTTTAT	-8	True	NA	16	True	AATAAA	-17	NA	11156424	11174379	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_11156548_11164310_11164570_11165089_11165448_11169709
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113826	chr4	+	5450	5	FSM	ENSMUSG00000028211.12	ENSMUST00000132010.8	5432	5	-16	-2	-6	2	multi-exon	FALSE	canonical	3	82	junction_4	77.6997425993163	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGAGGATTCTTTTATCT	-8	True	NA	18	True	AATAAA	-19	NA	11156424	11174381	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_11156548_11164310_11164570_11165089_11165448_11167896_11167935_11169709
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113847	chr4	+	2619	12	NIC	ENSMUSG00000028212.17	novel	2908	12	NA	NA	47	-221	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	73.3862193472497	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACTAACTGCTTAAAAGT	0	True	NA	3	True	AATAAA	-13	NA	11191782	11204454	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_11191808_11192680_11192718_11192814_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113850	chr4	+	2647	12	FSM	ENSMUSG00000028212.17	ENSMUST00000029866.16	3006	12	57	302	47	-198	multi-exon	FALSE	canonical	3	47	junction_2	64.9822607707368	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGCCATTGCTTGTAGA	0	True	NA	26	True	AATAAA	-36	NA	11191782	11204477	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_11191816_11192680_11192718_11192817_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113851	chr4	+	2668	12	FSM	ENSMUSG00000028212.17	ENSMUST00000108324.4	2908	12	53	187	47	-180	multi-exon	FALSE	canonical	3	208	junction_1	27.8285779741998	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACTTCTTTTTCCTTCTC	0	True	NA	44	True	AGTAAA	-19	NA	11191782	11204495	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_11191816_11192680_11192718_11192814_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113869	chr4	-	3672	27	FSM	ENSMUSG00000040738.11	ENSMUST00000108319.9	3220	27	-5	-447	-5	174	multi-exon	TRUE	canonical	3	373	junction_22	31.9212464720813	278	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAAAAGTGTTTAATTT	-6	True	NA	NA	False	AATAAA	-18	NA	11254263	11203935	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113885	chr4	+	199	1	Intergenic	novelGene_3479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGATTGGCTGCCATAT	7789	False	NA	NA	False	NA	NA	NA	11210200	11210399	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_11210200_11210400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113891	chr4	+	190	1	Intergenic	novelGene_3480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGTTATTTTACAGAAGC	NA	False	NA	NA	False	NA	NA	NA	11244939	11245129	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_11244900_11245100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113895	chr4	+	233	1	Intergenic	novelGene_3481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAATGAAGGATAGCTAAT	NA	False	NA	NA	False	TATAAA	-35	NA	11250890	11251123	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_11250900_11251100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113902	chr4	+	251	1	Intergenic	novelGene_3482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGTGTAGTGGGGCATT	NA	False	NA	NA	False	AATAAA	-9	NA	11254567	11254818	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_11254600_11254800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113923	chr4	+	182	1	Intergenic	novelGene_3483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTGCAGCTAGCTGTG	NA	False	NA	NA	False	NA	NA	NA	11373272	11373454	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_11373300_11373500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113938	chr4	+	212	1	Intergenic	novelGene_3484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGGGAAAACCTACAGGA	6250	False	NA	NA	False	NA	NA	NA	11552331	11552543	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_11552300_11552500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113951	chr4	+	2924	15	FSM	ENSMUSG00000078773.12	ENSMUST00000070755.13	2870	15	-52	-2	-2	2	multi-exon	FALSE	canonical	3	142	junction_12	66.7496464868725	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTGTATCCTTAAGT	-27	True	NA	21	True	AGTAAA	-18	NA	11558919	11615807	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11612617_11612819_11615442
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113958	chr4	+	2503	5	NNC	ENSMUSG00000078773.12	novel	2403	4	NA	NA	8	8	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_4	91.7261549395809	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAATTTATGTTATGTA	-17	True	NA	NA	False	AATAAA	-17	NA	11558929	11585752	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11578633_11578714_11583676
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113984	chr4	-	3466	28	FSM	ENSMUSG00000049488.15	ENSMUST00000050686.10	3456	28	-17	7	-17	1	multi-exon	FALSE	canonical	3	27	junction_10	5.81280927905584	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAAATTTTGGTTTGCGT	-13	True	NA	NA	False	AATAAA	-25	NA	12087974	12039361	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_12039893_12040634_12040778_12043464_12043568_12045794_12045900_12046002_12046120_12047197_12047315_12047809_12047891_12051387_12051529_12053446_12053587_12053674_12053775_12054745_12054833_12055030_12055130_12057315_12057415_12058520_12058578_12061754_12061861_12063034_12063159_12063673_12063831_12068867_12068934_12069413_12069492_12070236_12070346_12070448_12070604_12073893_12073957_12075454_12075530_12075622_12075693_12077335_12077436_12079874_12079969_12085911_12086001_12087714
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000113992	chr4	+	3400	4	NNC	ENSMUSG00000052137.12	novel	3327	4	NA	NA	-61	28	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	14.4299072146089	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACTTGTATTTGTGTAAC	-7	True	NA	12	True	AATAAA	-20	NA	12089377	12096271	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_12089506_12089662_12089728_12092522_12092573_12093114
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114001	chr4	-	1144	8	NNC	ENSMUSG00000028218.20	novel	648	7	NA	NA	27	52908	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	130.899556445204	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATTACACAGTCTTTCT	-12	True	NA	NA	False	ATTAAA	-36	NA	12171844	12100500	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_-_12100753_12155648_12155769_12157650_12157765_12164087_12164193_12168222_12168325_12168964_12169034_12170983_12171219_12171697
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114011	chr4	-	1149	8	NIC	ENSMUSG00000028218.20	novel	1639	9	NA	NA	27	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	135.606423302203	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATAGTCTTTCTTTCAT	-12	True	NA	-40	True	ATTAAA	-41	NA	12171844	12153721	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_12153979_12155648_12155769_12157650_12157765_12164087_12164193_12168222_12168325_12168964_12169034_12170983_12171219_12171697
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114017	chr4	+	1844	2	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	-52	739	multi-exon	FALSE	canonical	3	4269	junction_1	0	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	-4	True	NA	NA	False	AAAAAG	-13	NA	12232780	12234690	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr4_+_12232839_12232904
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114056	chr4	+	207	1	Intergenic	novelGene_3485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATATATAAATGCCTGAG	NA	False	NA	NA	False	NA	NA	NA	14827326	14827533	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_14827300_14827500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114070	chr4	+	3720	2	ISM	ENSMUSG00000028221.4	ENSMUST00000029875.4	2339	7	24726	21654	24726	-21654	internal_fragment	FALSE	canonical	3	292	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTAATGCTCATTTCTGA	NA	False	NA	NA	False	NA	NA	NA	14888801	14893522	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_+_14892500_14893500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114082	chr4	+	4767	3	FSM	ENSMUSG00000043252.9	ENSMUST00000062684.9	4670	3	-96	-1	-96	1	multi-exon	FALSE	canonical	3	428	junction_2	4.5	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTCTTCTCTTTCTTTC	NA	False	NA	19	True	AATAAA	-20	NA	15265734	15286754	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_15266750_15281006_15281163_15283158
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114096	chr4	+	2539	16	FSM	ENSMUSG00000028224.15	ENSMUST00000029879.15	2533	16	-6	0	-6	0	multi-exon	TRUE	canonical	3	165	junction_3	27.9629914152418	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTGTGTGGTAACGT	NA	False	NA	9	True	AATAAA	-15	NA	15957918	15992589	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_15958111_15962310_15962445_15963771_15963921_15964246_15964407_15965133_15965238_15969340_15969459_15970720_15970915_15971765_15971864_15976034_15976165_15979140_15979414_15981306_15981749_15983953_15984023_15986508_15986665_15989001_15989116_15991181_15991232_15992433
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114114	chr4	-	2521	6	FSM	ENSMUSG00000041153.10	ENSMUST00000037198.10	2658	6	34	103	-33	3	multi-exon	FALSE	canonical	3	76	junction_2	19.0305018325844	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGAACACTGAGT	-9	True	NA	-1	True	AATAAA	-20	NA	16013854	15997223	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_15999001_16001929_16002022_16005356_16005549_16006356_16006494_16008600_16008756_16013686
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114137	chr4	+	178	1	Intergenic	novelGene_3486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATAGGGTTATTTGGTT	NA	False	NA	NA	False	NA	NA	NA	16850553	16850731	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_16850600_16850700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114144	chr4	+	183	1	Intergenic	novelGene_3487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATGCATGGTATTG	NA	False	NA	NA	False	NA	NA	NA	16953674	16953857	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_16953700_16953900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114149	chr4	+	101	1	Intergenic	novelGene_3488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGATGGTTATGACCTC	NA	False	NA	NA	False	NA	NA	NA	16969576	16969677	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_16969600_16969700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114161	chr4	+	197	1	Intergenic	novelGene_3489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCAGTTGATAGGCATG	NA	False	NA	NA	False	NA	NA	NA	18619880	18620077	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_18619900_18620100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114168	chr4	+	213	1	Intergenic	novelGene_3490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGTCTTTGTAGATCTT	NA	False	NA	NA	False	NA	NA	NA	19006330	19006543	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_19006300_19006500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114174	chr4	-	5658	16	FSM	ENSMUSG00000028228.6	ENSMUST00000029885.5	5648	16	-4	-6	-4	6	multi-exon	FALSE	canonical	3	122	junction_5	15.541199724889	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTTGGTTTTCATTT	-17	True	NA	0	True	AATAAA	-21	NA	19570112	19519247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_19523295_19525002_19525240_19526283_19526418_19528059_19528112_19528187_19528243_19532398_19532533_19533054_19533115_19535211_19535299_19536526_19536626_19540740_19540831_19543253_19543338_19550587_19550660_19552243_19552319_19553717_19553898_19555361_19555502_19570000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114198	chr4	+	2552	5	FSM	ENSMUSG00000073988.14	ENSMUST00000121491.8	2862	5	310	0	-40	0	multi-exon	FALSE	canonical	3	35	junction_1	15.2212844398888	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTGTTTATATTTTTC	327	False	NA	21	True	AATAAA	-17	NA	20008316	20030470	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_20008347_20014630_20014785_20021191_20021386_20023784_20023896_20028407
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114212	chr4	+	1224	9	FSM	ENSMUSG00000073987.5	ENSMUST00000098242.4	1965	9	102	639	102	-639	multi-exon	FALSE	canonical	3	51	junction_6	14.9080515158756	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCTGTGATTATTGGC	-8	True	NA	NA	False	AATATA	-1	NA	20042153	20066111	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_20042283_20046202_20046315_20049791_20049843_20052663_20052749_20054063_20054203_20057936_20058044_20058138_20058230_20063998_20064137_20065739
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114215	chr4	+	187	1	Intergenic	novelGene_3491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGCCATGTAAGGGAT	NA	False	NA	NA	False	NA	NA	NA	21693914	21694101	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_21693900_21694100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114229	chr4	+	186	1	Intergenic	novelGene_3492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTAAATGATGGGTTGT	NA	False	NA	NA	False	NA	NA	NA	21722321	21722507	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_21722300_21722500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114231	chr4	+	198	1	Intergenic	novelGene_3493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGATCTGCCGGGCGTGGT	NA	False	NA	NA	False	NA	NA	NA	21725851	21726049	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_21725900_21726000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114240	chr4	+	3385	12	FSM	ENSMUSG00000028252.21	ENSMUST00000102997.8	3365	12	-19	-1	6	1	multi-exon	FALSE	canonical	3	192	junction_11	80.4513096421711	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTCTTTTTAATTTT	1	True	NA	NA	False	NA	NA	NA	21727706	21750547	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21748136
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114260	chr4	-	208	1	Intergenic	novelGene_3494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCGCCATCTCTCTCA	NA	False	NA	NA	False	NA	NA	NA	21753265	21753057	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_21753100_21753300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114271	chr4	+	179	1	Intergenic	novelGene_3495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTTGGATGTTTGCTA	5039	False	NA	NA	False	NA	NA	NA	21754744	21754923	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_21754700_21754900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114279	chr4	-	1580	4	FSM	ENSMUSG00000028251.6	ENSMUST00000029915.6	1588	4	8	0	8	0	multi-exon	FALSE	canonical	3	232	junction_1	27.288581250528	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGCATGTATTTCTTTAA	-9	True	NA	0	True	AATAAA	-24	NA	21767204	21757381	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_21758476_21759369_21759530_21759622_21759794_21767049
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114284	chr4	+	4092	12	FSM	ENSMUSG00000028248.16	ENSMUST00000029911.12	4545	12	453	0	-12	0	multi-exon	FALSE	canonical	3	306	junction_11	60.0897400518935	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGCTATGATACATACA	458	False	NA	18	True	AATAAA	-18	NA	21848035	21876475	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21874673_21874912
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114290	chr4	+	3844	10	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	-7	0	intron_retention	FALSE	canonical	3	402	junction_3	31.0876895964374	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	-18	True	NA	13	True	AATAAA	-25	NA	21848040	21875256	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21870406_21871437_21871609_21873585
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114294	chr4	+	3108	11	ISM	ENSMUSG00000028248.16	ENSMUST00000029911.12	4545	12	458	1219	-7	0	intron_retention	FALSE	canonical	3	310	junction_8	50.2622124463299	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	-18	True	NA	13	True	AATAAA	-25	NA	21848040	21875256	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114311	chr4	+	4869	9	NIC	ENSMUSG00000028248.16	novel	2438	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	402	junction_3	32.8785644455472	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	-11	True	NA	13	True	AATAAA	-25	NA	21848047	21875256	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21871609_21873585
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114320	chr4	+	3033	11	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	26	junction_4	131.149380478903	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	-1	True	NA	13	True	AATAAA	-25	NA	21848057	21875256	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860877_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114333	chr4	+	2657	7	FSM	ENSMUSG00000028247.3	ENSMUST00000029909.3	2651	7	-5	-1	-5	1	multi-exon	FALSE	canonical	3	302	junction_5	29.1414176426306	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGCCATTGTGCT	-15	True	NA	12	True	NA	NA	NA	21879667	21912163	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_21879797_21892808_21892936_21896554_21896708_21899057_21899158_21900263_21900507_21908482_21908643_21910418
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114339	chr4	+	150	1	ISM	ENSMUSG00000028247.3	ENSMUST00000029909.3	2651	7	30947	1393	11908	-1393	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTGTCACCTAAGAGA	NA	False	NA	23	True	AATAAA	-25	NA	21910619	21910769	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_+_21910600_21910800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114346	chr4	+	187	1	Intergenic	novelGene_3496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAGAAATCAGGTGCAGA	NA	False	NA	NA	False	NA	NA	NA	21954803	21954990	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_21954800_21955000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114367	chr4	+	4489	24	FSM	ENSMUSG00000045751.17	ENSMUST00000108222.9	4478	24	-11	0	-11	0	multi-exon	FALSE	canonical	3	129	junction_15	74.8650203134992	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	-27	True	NA	NA	False	ATTAAA	-23	NA	24496439	24602950	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114376	chr4	+	1355	5	FSM	ENSMUSG00000045751.17	ENSMUST00000138567.9	1350	5	-3	-2	-3	2	multi-exon	FALSE	canonical	3	361	junction_3	29.9457843443781	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCATTCTCGTTGATAA	-8	True	NA	11	True	AATAAA	-20	NA	24496458	24503415	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114378	chr4	+	4473	24	NIC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	-3	0	intron_retention	FALSE	canonical	3	64	junction_15	79.749300001076	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	-8	True	NA	NA	False	ATTAAA	-23	NA	24496458	24602950	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580050_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114389	chr4	-	184	1	Intergenic	novelGene_3497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGGCAAGAAGGCATAAT	NA	False	NA	NA	False	NA	NA	NA	24579783	24579599	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_24579600_24579800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114391	chr4	+	2135	3	FSM	ENSMUSG00000028261.14	ENSMUST00000029925.10	3632	3	-4	1501	-4	-5	multi-exon	FALSE	canonical	3	446	junction_2	23.5	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCACTTTTCTGGTTTTTT	3203	False	NA	9	True	AATAAA	-22	NA	24898078	24903500	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_24898303_24898572_24898677_24901693
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114402	chr4	+	2385	2	FSM	ENSMUSG00000028261.14	ENSMUST00000146721.2	2358	2	-32	5	16	-5	multi-exon	FALSE	canonical	3	446	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCACTTTTCTGGTTTTTT	-21	True	NA	9	True	AATAAA	-22	NA	24898098	24903500	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_24898677_24901693
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114437	chr4	+	184	1	Intergenic	novelGene_3498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTAGCCATAAGCTTCTC	NA	False	NA	NA	False	NA	NA	NA	25780375	25780559	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_25780400_25780600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114442	chr4	-	4872	5	FSM	ENSMUSG00000040520.8	ENSMUST00000041374.8	4867	5	-5	0	-5	0	multi-exon	TRUE	canonical	3	44	junction_4	9.33742469849155	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAAATCTATTCATTGTT	-5	True	NA	-4	True	AATAAA	-25	NA	26346896	26324505	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_26328309_26329085_26329163_26336620_26336731_26340416_26340999_26346596
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114452	chr4	+	4900	17	FSM	ENSMUSG00000028284.14	ENSMUST00000037607.11	5773	17	-185	1058	-185	-1058	multi-exon	TRUE	canonical	3	147	junction_6	19.7680890262564	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGGAATGGTAGCTGGCT	NA	False	NA	18	True	AATAAA	-27	NA	31963911	32022409	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114463	chr4	+	191	1	Intergenic	novelGene_3499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTTTAACTATATATTAA	NA	False	NA	NA	False	NA	NA	NA	31983461	31983652	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_31983500_31983700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114472	chr4	+	187	1	Intergenic	novelGene_3500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCACCGACCTGAACTCCA	NA	False	NA	NA	False	NA	NA	NA	32572570	32572757	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_32572600_32572800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114480	chr4	+	193	1	Intergenic	novelGene_3501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTAAAGCGTTCACAAGC	NA	False	NA	NA	False	NA	NA	NA	32588561	32588754	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_32588600_32588800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114490	chr4	+	6601	11	FSM	ENSMUSG00000028282.13	ENSMUST00000178925.8	6557	11	-38	-6	-16	6	multi-exon	FALSE	canonical	3	150	junction_1	42.596243965871	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTATGCTTCTTTTGTTG	-14	True	NA	13	True	AATAAA	-26	NA	32615434	32653271	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_32615493_32624083_32624167_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114513	chr4	+	201	1	Intergenic	novelGene_3502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCTTGCCTAGGGTTGG	4896	False	NA	NA	False	NA	NA	NA	32764013	32764214	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_32764000_32764200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114521	chr4	+	191	1	Intergenic	novelGene_3503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTAAAATTCCAGGCTAT	NA	False	NA	NA	False	NA	NA	NA	32778543	32778734	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_32778500_32778700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114525	chr4	+	149	1	Intergenic	novelGene_3504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAATCAAAAATCTGTAA	NA	False	NA	NA	False	NA	NA	NA	32778774	32778923	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_32778800_32778900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114527	chr4	+	1343	3	FSM	ENSMUSG00000045854.5	ENSMUST00000062802.5	465	3	6	-884	6	708	multi-exon	FALSE	canonical	3	270	junction_2	3	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCATCATTAAGGAGCAT	-9	True	NA	NA	False	NA	NA	NA	32800258	32802267	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_32800336_32800609_32800751_32801142
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114539	chr4	-	194	1	Intergenic	novelGene_3505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGGCTATGGGTAAGAAA	6195	False	NA	NA	False	NA	NA	NA	32858413	32858219	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_32858200_32858400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114548	chr4	+	202	1	Intergenic	novelGene_3506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAGTTGCCTTGATCAT	NA	False	NA	NA	False	NA	NA	NA	32976652	32976854	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_32976700_32976900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114554	chr4	+	5029	7	FSM	ENSMUSG00000028278.15	ENSMUST00000098190.10	5008	7	-21	0	-21	0	multi-exon	FALSE	canonical	3	113	junction_4	9.38823140367177	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGAAGTGGGGTCTCT	-8	True	NA	4	True	AATAAA	-19	NA	32983015	33022180	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_32983608_32995801_32996098_33004150_33004351_33005133_33005249_33007069_33007213_33012903_33013053_33018646
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114588	chr4	-	1702	2	FSM	ENSMUSG00000040128.10	ENSMUST00000049357.10	1648	2	-58	4	-58	-4	multi-exon	FALSE	canonical	3	146	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTAGTCTTGGCTTTTTGTG	169	False	NA	-2	True	TTTAAA	-34	NA	33248568	33245426	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_33246508_33247947
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114595	chr4	+	187	1	Intergenic	novelGene_3507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACATCAACTTAGGAGAC	NA	False	NA	NA	False	NA	NA	NA	33285051	33285238	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_33285100_33285200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114598	chr4	+	203	1	Antisense	novelGene_ENSMUSG00000086127.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATATTCTGTGGATCTC	NA	False	NA	NA	False	NA	NA	NA	33304804	33305007	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr4_+_33304800_33305000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114603	chr4	+	4157	16	FSM	ENSMUSG00000028274.18	ENSMUST00000108153.9	4157	16	0	0	0	0	multi-exon	TRUE	canonical	3	214	junction_12	34.6965256025569	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTTCCTGTCTCG	-36	True	NA	11	True	AATAAA	-18	NA	33310310	33502614	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_33310525_33320518_33320629_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114616	chr4	+	170	1	Intergenic	novelGene_3508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGTGGAGACTGTTGT	NA	False	NA	NA	False	NA	NA	NA	33524204	33524374	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_33524200_33524400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114625	chr4	+	194	1	Intergenic	novelGene_3509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAGCCTGGCTCAA	NA	False	NA	NA	False	NA	NA	NA	34179102	34179296	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_34179100_34179300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114632	chr4	+	184	1	Intergenic	novelGene_3510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGGAACTCTTCTTTCTC	NA	False	NA	NA	False	NA	NA	NA	34426196	34426380	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_34426200_34426400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114638	chr4	+	202	1	Intergenic	novelGene_3511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACCTCAAGGCATTCTC	NA	False	NA	NA	False	NA	NA	NA	34547475	34547677	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_34547500_34547700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114670	chr4	-	2278	20	FSM	ENSMUSG00000040044.12	ENSMUST00000108142.8	2266	20	-12	0	-12	0	multi-exon	FALSE	canonical	3	292	junction_6	92.190426792828	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGCTTCATTCTTGCT	-17	True	NA	-17	True	CATAAA	-21	NA	34614925	34570795	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578030_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114679	chr4	+	1877	20	FSM	ENSMUSG00000028292.15	ENSMUST00000029968.14	1868	20	-9	0	-9	0	multi-exon	TRUE	canonical	3	576	junction_1	51.5992441268264	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTAGTAGTGTGTTTT	-21	True	NA	12	True	AATAGA	-27	NA	34614947	34660167	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114692	chr4	+	1959	21	NNC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_9	178.38710715744	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTAGTAGTGTGTTTT	0	True	NA	12	True	AATAGA	-27	NA	34614968	34660167	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34640873_34640977_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114693	chr4	+	1848	20	NNC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_12	155.081928128757	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTGTGTAGTAGTGTG	0	True	NA	8	True	AATAGA	-23	NA	34614968	34660163	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652135_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114719	chr4	-	230	1	Intergenic	novelGene_3512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTGTAAAACCATTAACCA	NA	False	NA	NA	False	AAAAAG	-26	NA	34780951	34780721	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_34780700_34781000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114726	chr4	+	184	1	Intergenic	novelGene_3513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTTAACTAATAAACTAC	NA	False	NA	NA	False	NA	NA	NA	34790165	34790349	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_34790200_34790300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114733	chr4	-	9960	8	FSM	ENSMUSG00000039967.15	ENSMUST00000047950.6	9986	8	14	12	14	-12	multi-exon	FALSE	canonical	3	109	junction_4	23.430313524081	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTCAACAACTGAATAA	-5	True	NA	-7	True	AATAAA	-25	NA	34882946	34803124	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_34812044_34816273_34816416_34819463_34819601_34826692_34826896_34839331_34839468_34839568_34839648_34839831_34839987_34882757
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114744	chr4	+	200	1	Intergenic	novelGene_3514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGTATTGAGATGATAGA	NA	False	NA	NA	False	NA	NA	NA	34876194	34876394	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_34876200_34876400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114751	chr4	-	201	1	Intergenic	novelGene_3515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGCATACATACATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34935995	34935794	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_34935800_34936000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114763	chr4	+	231	1	Intergenic	novelGene_3516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTATATATTGTAGGATC	NA	False	NA	NA	False	NA	NA	NA	35166507	35166738	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_35166500_35166700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114771	chr4	-	3180	11	FSM	ENSMUSG00000028300.15	ENSMUST00000108127.4	3193	11	19	-6	19	4	multi-exon	FALSE	canonical	3	67	junction_8	10.8355895086516	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTAGTTCATTATTTAG	NA	False	NA	1	True	AATAAA	-22	NA	35225861	35191280	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_35193069_35193184_35193295_35194136_35194195_35196972_35197209_35205767_35205885_35211291_35211365_35213008_35213074_35213548_35213645_35217212_35217273_35218413_35218917_35225787
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114782	chr4	-	179	1	Intergenic	novelGene_3517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATAATTTTCTCAT	NA	False	NA	NA	False	NA	NA	NA	36587178	36586999	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_36587000_36587200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114790	chr4	+	213	1	Intergenic	novelGene_3518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	408	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTAGGGCTGAATTGTCA	NA	False	NA	NA	False	NA	NA	NA	38983267	38983480	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_38983300_38983500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114802	chr4	+	173	1	Intergenic	novelGene_3519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAGGAAAGGA	NA	False	NA	NA	False	NA	NA	NA	40131547	40131720	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_40131500_40131700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114821	chr4	-	2459	9	FSM	ENSMUSG00000040296.16	ENSMUST00000137903.8	3533	9	2	1072	2	0	multi-exon	FALSE	canonical	3	61	junction_4	6.68487097856047	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTCCAATTCATTCCCT	-7	True	NA	-10	True	AATAAA	-22	NA	40220598	40204848	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_40206107_40208450_40208595_40208770_40208923_40209878_40210050_40211549_40211641_40213730_40213880_40216354_40216491_40217329_40217488_40220398
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114825	chr4	+	204	1	Intergenic	novelGene_3520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2287	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTGAAGAAGATTCCAAGG	NA	False	NA	NA	False	NA	NA	NA	40214109	40214313	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_40214100_40214300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114836	chr4	+	193	1	Intergenic	novelGene_3521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAACAGATTCAGAAAG	NA	False	NA	NA	False	NA	NA	NA	40217791	40217984	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_40217800_40218000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114839	chr4	-	3869	3	FSM	ENSMUSG00000036822.7	ENSMUST00000042575.7	3856	3	-13	0	-13	0	multi-exon	FALSE	canonical	3	214	junction_1	19	242	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTGCAACATTGATT	9548	False	NA	0	True	AATAAA	-28	NA	40269863	40259600	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_40263082_40268303_40268502_40269673
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114860	chr4	-	584	4	FSM	ENSMUSG00000071014.11	ENSMUST00000095128.10	659	4	12	63	0	11	multi-exon	FALSE	canonical	3	2502	junction_3	28.8251433455046	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTTACTGTCCAAAGGTT	2	True	NA	0	True	AATAAA	-28	NA	40279409	40270653	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_40270848_40272809_40272855_40277652_40277746_40279157
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114882	chr4	+	229	1	Intergenic	novelGene_3522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	366	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTAAGCGACCTCCAGTT	NA	False	NA	NA	False	NA	NA	NA	40691908	40692137	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_40691900_40692100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114889	chr4	+	2351	9	FSM	ENSMUSG00000028410.14	ENSMUST00000030118.10	3376	9	-27	1052	-27	12	multi-exon	FALSE	canonical	3	1814	junction_2	361.659175709673	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGGCCTTTTTTTCTCA	1309	False	NA	17	True	AATATA	-29	NA	40722452	40733912	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_40722634_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114907	chr4	+	1579	9	FSM	ENSMUSG00000028410.14	ENSMUST00000164233.8	5622	9	0	4043	0	-794	multi-exon	FALSE	canonical	3	76	junction_1	940.162278213182	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGCCCTGTATGTAT	-35	True	NA	12	True	AATAAA	-18	NA	40722921	40733106	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_40723137_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114920	chr4	-	2323	12	FSM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	24	71	-16	-71	multi-exon	FALSE	canonical	3	1190	junction_8	75.1643928360578	347	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGTCTCTTATGTATAT	8559	False	NA	-10	True	AAGAAA	-14	NA	40757899	40736612	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_40737396_40738289_40738443_40739518_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40755626_40755838_40757776
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114948	chr4	+	180	1	Intergenic	novelGene_3523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTTTTTTAATCCCA	NA	False	NA	NA	False	NA	NA	NA	40907803	40907983	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_40907800_40908000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114955	chr4	+	197	1	Intergenic	novelGene_3524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTTTAAAAAGATTAATT	NA	False	NA	NA	False	NA	NA	NA	40909689	40909886	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_40909700_40909900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114962	chr4	+	164	1	Intergenic	novelGene_3525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTGTACAATTGTT	NA	False	NA	NA	False	NA	NA	NA	40911531	40911695	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_40911500_40911700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114966	chr4	-	2471	7	FSM	ENSMUSG00000028416.14	ENSMUST00000191273.7	1348	7	-14	-1109	-14	1108	multi-exon	FALSE	canonical	3	1821	junction_3	173.811599791907	368	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGGCTTCAAGGTGCTC	1	True	NA	NA	False	NA	NA	NA	40948308	40935289	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_40936677_40937131_40937195_40939076_40939185_40941524_40941639_40943624_40943708_40946168_40946298_40947721
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114979	chr4	+	181	1	Intergenic	novelGene_3526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAAAAAAGGCTTTAGTC	NA	False	NA	NA	False	NA	NA	NA	40943384	40943565	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_40943400_40943600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114988	chr4	+	1409	8	FSM	ENSMUSG00000028419.6	ENSMUST00000030128.6	1519	8	110	0	110	0	multi-exon	FALSE	canonical	3	499	junction_1	44.0352363547231	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATTGTAGTATCGCTTT	18	False	NA	14	True	AATAAA	-16	NA	40948516	40965303	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_40948677_40949453_40949559_40950513_40950561_40952367_40952462_40952981_40953054_40958889_40958999_40960858_40960972_40964594
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000114997	chr4	+	4305	16	FSM	ENSMUSG00000028423.16	ENSMUST00000030133.15	4349	16	44	0	44	0	multi-exon	FALSE	canonical	3	463	junction_8	92.9020033272815	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCCTCTTCATTTTT	6089	False	NA	NA	False	AATAAA	-15	NA	40970949	41013871	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41012057
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115011	chr4	+	4530	24	FSM	ENSMUSG00000028423.16	ENSMUST00000098143.11	4594	24	64	0	64	0	multi-exon	FALSE	canonical	3	177	junction_17	193.960434840598	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTATTTTGTTTATTGAG	-22	True	NA	34	True	ATTAAA	-19	NA	40970969	41025993	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41015202_41015434_41016076_41016151_41017971_41018074_41018447_41018490_41021748_41021848_41022259_41022327_41023613_41023760_41024473_41024579_41024800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115014	chr4	+	3366	16	NNC	ENSMUSG00000028423.16	novel	3617	16	NA	NA	66	0	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_15	149.55756974044	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTCTTGTCAGGCTA	-20	True	NA	16	True	NA	NA	NA	40970971	41012608	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41011711
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115021	chr4	+	3545	16	FSM	ENSMUSG00000028423.16	ENSMUST00000091614.7	3617	16	72	0	72	0	multi-exon	FALSE	canonical	3	26	junction_15	162.820473733086	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTCTTGTCAGGCTA	-14	True	NA	16	True	NA	NA	NA	40970977	41012608	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41011526
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115036	chr4	-	194	1	Intergenic	novelGene_3527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGACAGCCAGATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	41051855	41051661	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_41051700_41051900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115037	chr4	+	176	1	Intergenic	novelGene_3528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAGAAGAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	41060721	41060897	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_41060700_41060900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115047	chr4	-	1769	6	FSM	ENSMUSG00000028435.9	ENSMUST00000055327.8	1765	6	0	-4	0	4	multi-exon	FALSE	canonical	3	1694	junction_1	130.458269189806	651	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGTGTGTTTTTTGT	-1	True	NA	0	True	AATAAA	-25	NA	41098183	41092717	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_41093703_41093781_41094000_41094265_41094385_41094700_41094839_41095144_41095272_41098001
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115081	chr4	+	189	1	Intergenic	novelGene_3529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTCAGATGTCACTGTT	NA	False	NA	NA	False	NA	NA	NA	41163324	41163513	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_41163300_41163500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115086	chr4	+	186	1	Intergenic	novelGene_3530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTTAGATAAACTCTTTT	NA	False	NA	NA	False	NA	NA	NA	41176994	41177180	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_41177000_41177200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115102	chr4	-	4201	28	NIC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	14	0	combination_of_known_junctions	TRUE	canonical	3	112	junction_27	174.707288022968	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCTCCGTGTTCTGGC	2	True	NA	-3	True	AATAAA	-15	NA	41275102	41194312	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41275039
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115104	chr4	-	4326	29	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	182	junction_12	158.993144987642	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCTCCGTGTTCTGGC	-4	True	NA	-3	True	AATAAA	-15	NA	41275108	41194312	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202440_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115119	chr4	-	4425	28	NIC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	14	0	intron_retention	FALSE	canonical	3	748	junction_16	85.5414771164856	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCTCCGTGTTCTGGC	2	True	NA	-3	True	AATAAA	-15	NA	41275102	41194312	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115127	chr4	-	2931	12	ISM	ENSMUSG00000028433.15	ENSMUST00000030143.13	4368	29	72010	-1	-3048	1	3prime_fragment	FALSE	canonical	3	791	junction_7	51.0985112428892	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	8754	False	NA	-5	True	AATAAA	-13	NA	41203125	41194314	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115132	chr4	-	4333	29	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	14	1	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_21	183.593199792923	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	2	True	NA	-5	True	AATAAA	-13	NA	41275102	41194314	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221619_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115179	chr4	-	171	1	Intergenic	novelGene_3531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAGAACTTTATAG	NA	False	NA	NA	False	NA	NA	NA	41345598	41345427	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_41345400_41345600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115210	chr4	+	198	1	Intergenic	novelGene_3532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	221	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCTTCACAAACAAGCCCA	NA	False	NA	NA	False	NA	NA	NA	41485040	41485238	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_41485000_41485200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115214	chr4	-	4235	2	FSM	ENSMUSG00000046312.5	ENSMUST00000054920.5	4173	2	-59	-3	-59	3	multi-exon	FALSE	canonical	3	158	junction_1	0	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGTTTTCTTGCTTAA	5831	False	NA	1	True	NA	NA	NA	41503135	41495600	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_41499691_41502990
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115236	chr4	-	832	7	FSM	ENSMUSG00000028447.12	ENSMUST00000030158.11	973	7	-5	146	-5	-146	multi-exon	FALSE	canonical	3	869	junction_5	34.1829229619443	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGGCCTGCTGATGT	-21	True	NA	NA	False	AATAAA	-21	NA	41723175	41714943	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_41715260_41715395_41715456_41716395_41716455_41717356_41717441_41719836_41719924_41720782_41720868_41723034
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115247	chr4	-	1639	4	FSM	ENSMUSG00000036078.17	ENSMUST00000059354.15	1640	4	0	1	0	-1	multi-exon	FALSE	canonical	3	474	junction_2	54.2647829320883	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTTTCCTTATGTGTCTA	3747	False	NA	NA	False	AATAAA	-16	NA	41741359	41738493	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_41739581_41740549_41740643_41740775_41740977_41741101
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115265	chr4	+	1332	11	FSM	ENSMUSG00000036073.19	ENSMUST00000084695.12	1595	11	270	-7	245	7	multi-exon	FALSE	canonical	2	236	junction_6	31.3438989278615	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTAGTGTGGACTCTTAC	5	True	NA	39	True	AATAAA	-40	NA	41755497	41758702	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_41755653_41755960_41756131_41756346_41756423_41756512_41756562_41756681_41756812_41756938_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115290	chr4	+	2400	4	FSM	ENSMUSG00000036052.15	ENSMUST00000098112.9	3093	4	0	693	0	0	multi-exon	FALSE	canonical	3	21	junction_3	4.32049379893857	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCTGCGCAGAAGCAGTA	-26	True	NA	NA	False	AATAAA	-17	NA	42949866	42958732	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_42950005_42953140_42953386_42956525_42957128_42957317
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115317	chr4	-	2692	14	FSM	ENSMUSG00000028453.11	ENSMUST00000030165.5	2771	14	85	-6	-48	6	multi-exon	FALSE	canonical	3	78	junction_11	17.9578731229673	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTATGTGTGTGTGTGTG	-22	True	NA	0	True	ATTAAA	-22	NA	43010270	43002336	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43008914_43009147_43009280_43009706_43009801_43010001
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115338	chr4	-	3989	10	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	18	-3	intron_retention	FALSE	canonical	3	84	junction_9	35.2686339855951	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTAGCTAAGATCTGTG	11	True	NA	-10	True	AATAAA	-18	NA	43025801	43017637	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025779
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115343	chr4	-	4056	11	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	-31	-3	intron_retention	FALSE	canonical	3	30	junction_10	46.9541265492182	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTAGCTAAGATCTGTG	-11	True	NA	-10	True	AATAAA	-18	NA	43025787	43017637	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025285
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115349	chr4	-	1656	10	FSM	ENSMUSG00000028455.16	ENSMUST00000030169.15	1874	10	218	0	-36	0	multi-exon	FALSE	canonical	3	2352	junction_9	320.749854459519	833	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGAGATGGCTGTGGTG	8807	False	NA	-4	True	AATAAA	-19	NA	43031492	43027689	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115376	chr4	-	3061	9	FSM	ENSMUSG00000036002.13	ENSMUST00000107956.8	3107	9	46	0	8	0	multi-exon	TRUE	canonical	3	38	junction_5	6.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCTCTACTTTTTTTTG	455	False	NA	2	True	AATAAA	-21	NA	43045751	43032413	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_43033689_43033811_43033988_43034084_43034154_43034375_43034535_43034658_43034765_43034942_43035002_43035835_43036805_43037062_43037207_43045647
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115384	chr4	-	180	1	Intergenic	novelGene_3533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAAGGGGGGGGGGGC	NA	False	NA	NA	False	NA	NA	NA	43054112	43053932	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_43053900_43054100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115405	chr4	+	191	1	Intergenic	novelGene_3534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATAGCATAGGTAAAATA	NA	False	NA	NA	False	NA	NA	NA	43432671	43432862	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_43432700_43432900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115415	chr4	+	194	1	Intergenic	novelGene_3535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACTCAATGAAGTGAAAAA	9913	False	NA	NA	False	NA	NA	NA	43464090	43464284	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_43464100_43464300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115439	chr4	-	1610	9	FSM	ENSMUSG00000051517.15	ENSMUST00000054538.13	1659	9	49	0	15	0	multi-exon	FALSE	canonical	3	105	junction_3	13.833270582187	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCTGTCTAAATCACG	1	True	NA	-3	True	AATAAA	-18	NA	43499646	43496141	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_43496721_43496820_43496910_43497086_43497317_43497581_43497711_43497958_43498030_43498585_43498705_43498895_43499017_43499242_43499338_43499469
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115446	chr4	+	163	1	Intergenic	novelGene_3536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAACCAAATAGCT	7761	False	NA	NA	False	NA	NA	NA	43516635	43516798	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_43516600_43516800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115468	chr4	-	3563	17	FSM	ENSMUSG00000028467.16	ENSMUST00000030189.14	3544	17	-19	0	-19	0	multi-exon	FALSE	canonical	3	32	junction_8	9.51314879522022	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGTGGTGTGTCTGAG	-26	True	NA	-1	True	AATAAA	-16	NA	43578892	43566927	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_43567468_43567724_43567917_43567999_43568116_43568195_43568339_43568437_43568545_43568654_43568807_43568885_43568994_43569180_43569286_43569488_43569662_43569829_43569956_43570036_43570191_43570345_43570449_43570671_43570912_43571188_43571408_43573750_43573867_43574027_43574120_43578015
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115480	chr4	-	627	5	FSM	ENSMUSG00000028470.11	ENSMUST00000030192.5	610	5	-15	-2	-15	0	multi-exon	FALSE	canonical	3	693	junction_3	25.1433390781734	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTATCCCTGTCTTAAA	5534	False	NA	-5	True	AATAAA	-16	NA	43656481	43654226	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_43654412_43654512_43654586_43654715_43654821_43654905_43655047_43656358
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115494	chr4	+	511	1	FSM	ENSMUSG00000043770.11	ENSMUST00000102482.5	297	1	-124	-90	-124	90	mono-exon	FALSE	NA	NA	NA	NA	NA	513	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAGAGATGAAGGGGAGA	8380	False	NA	NA	False	ATTAAA	-33	NA	43663918	43664429	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_43663900_43664400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115498	chr4	+	4439	21	FSM	ENSMUSG00000028476.14	ENSMUST00000030198.7	4433	21	-6	0	-6	0	multi-exon	TRUE	canonical	3	46	junction_14	9.31812749429841	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGTGTCTTTACTGT	NA	False	NA	NA	False	AATGAA	-19	NA	43875523	43944806	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_43875706_43890963_43891023_43894818_43894894_43895849_43895887_43897994_43898081_43900069_43900118_43909579_43909614_43911931_43912130_43913784_43914053_43918313_43918494_43922811_43923025_43925060_43925198_43927145_43927287_43928276_43928466_43930192_43930316_43930888_43931061_43937309_43937503_43938888_43939100_43940656_43940731_43942273_43942430_43943143
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115508	chr4	+	243	1	Intergenic	novelGene_3537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGGGCTACATCCCAAG	NA	False	NA	NA	False	AAAAAG	-44	NA	43891686	43891929	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_43891700_43891900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115518	chr4	+	2073	5	FSM	ENSMUSG00000028480.15	ENSMUST00000030202.14	2320	5	251	-4	-40	4	multi-exon	FALSE	canonical	3	229	junction_4	22.0567450001128	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCTAATGCGATTCGAT	137	False	NA	40	True	AATAAA	-25	NA	43957651	43979122	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_43957774_43968111_43968221_43968571_43968676_43970499_43970578_43977462
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115529	chr4	+	217	1	Intergenic	novelGene_3538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAACCAACCAAAGATATG	7237	False	NA	NA	False	NA	NA	NA	44011683	44011900	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_44011700_44011900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115541	chr4	+	1045	5	FSM	ENSMUSG00000028478.19	ENSMUST00000107845.4	1031	5	-16	2	-8	-1	multi-exon	FALSE	canonical	3	59	junction_1	565.255860208455	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACATGAAGCATCTTTAA	-8	True	NA	19	True	AATAAA	-19	NA	44012669	44032844	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_44013003_44018812_44018851_44019873_44019992_44025448_44025561_44032400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115562	chr4	-	206	1	Intergenic	novelGene_3539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAGTTATAATACTGCAC	NA	False	NA	NA	False	NA	NA	NA	44093692	44093486	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_44093500_44093700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115573	chr4	+	197	1	Intergenic	novelGene_3540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACTGGTCAATTCTGAGC	NA	False	NA	NA	False	NA	NA	NA	44190823	44191020	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_44190800_44191000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115577	chr4	+	236	1	Intergenic	novelGene_3541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTATTAGTGTACAAAAAA	NA	False	NA	NA	False	AAAAAG	-6	NA	44198732	44198968	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_44198700_44199000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115583	chr4	+	186	1	Intergenic	novelGene_3542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAATACATTAAAAAA	NA	False	NA	5	True	NA	NA	NA	44223151	44223337	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_44223200_44223300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115590	chr4	+	188	1	Intergenic	novelGene_3543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGAGGAGGAGGA	NA	False	NA	NA	False	NA	NA	NA	44246739	44246927	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_44246700_44246900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115594	chr4	-	184	1	Intergenic	novelGene_3544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATGTACTCCCAAA	NA	False	NA	NA	False	NA	NA	NA	44248512	44248328	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_44248300_44248500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115597	chr4	-	179	1	Intergenic	novelGene_3545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAGAGGAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	44280079	44279900	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_44279900_44280100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115602	chr4	+	2952	18	FSM	ENSMUSG00000035683.14	ENSMUST00000045607.12	2955	18	12	-9	12	9	multi-exon	FALSE	canonical	2	288	junction_12	49.6985375708199	258	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTGGTCAGTAG	NA	False	NA	NA	False	ATTAAA	-20	NA	44300887	44364684	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115611	chr4	+	176	1	Intergenic	novelGene_3546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCAAGCAGCTGTTGGAA	NA	False	NA	NA	False	NA	NA	NA	44554747	44554923	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_44554700_44554900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115622	chr4	+	186	1	Intergenic	novelGene_3547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTCATAAGAAAATGAAATTC	NA	False	NA	NA	False	NA	NA	NA	44861887	44862073	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_44861900_44862100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115627	chr4	+	185	1	Intergenic	novelGene_3548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCTTGCTAAACATTTAC	1664	False	NA	NA	False	NA	NA	NA	44886605	44886790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_44886600_44886800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115634	chr4	-	185	1	Intergenic	novelGene_3549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACTCCAGCTACAGAGA	NA	False	NA	0	True	NA	NA	NA	44946298	44946113	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_44946100_44946300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115639	chr4	+	1279	9	FSM	ENSMUSG00000035637.15	ENSMUST00000045078.13	1280	9	0	1	0	-1	multi-exon	FALSE	canonical	3	277	junction_3	33.5326333591622	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTTTTGTGTTTGCTGA	-31	True	NA	12	True	NA	NA	NA	44981394	44990733	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_44981535_44982878_44983010_44983873_44983947_44984429_44984547_44985306_44985396_44986285_44986391_44987215_44987352_44988919_44989051_44990376
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115672	chr4	-	650	2	FSM	ENSMUSG00000078713.9	ENSMUST00000107810.3	639	2	-11	0	-11	0	multi-exon	FALSE	canonical	3	2176	junction_1	0	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTTTTGTGTTTTTAAT	-27	True	NA	NA	False	AATAAA	-18	NA	45108125	45105207	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_45105645_45107912
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115685	chr4	-	180	1	Intergenic	novelGene_3550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAAGATGCGTGTTT	NA	False	NA	NA	False	NA	NA	NA	45262677	45262497	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_45262500_45262700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115689	chr4	+	1396	9	FSM	ENSMUSG00000035601.10	ENSMUST00000044673.9	2064	9	26	642	-2	347	multi-exon	FALSE	canonical	3	203	junction_1	41.8103979292233	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCGATTTCCACCAGCT	-10	True	NA	12	True	CATAAA	-21	NA	45297152	45315489	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_45297196_45300416_45300628_45301235_45301351_45304263_45304389_45305743_45305897_45307891_45307971_45308496_45308565_45314282_45314407_45315011
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115701	chr4	-	1077	4	FSM	ENSMUSG00000028322.12	ENSMUST00000030003.10	1077	4	2	-2	2	2	multi-exon	FALSE	canonical	3	481	junction_1	46.9065264352651	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTAGTTCTACAGTAC	-20	True	NA	1	True	AATAAA	-19	NA	45320627	45316610	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_45317029_45317677_45317830_45319549_45319700_45320270
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115716	chr4	-	1941	3	FSM	ENSMUSG00000045973.19	ENSMUST00000107796.8	4433	3	0	2492	0	826	multi-exon	FALSE	canonical	3	68	junction_2	5.5	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTTAATGCAACCCCAAG	-17	True	NA	NA	False	AATAAA	-26	NA	45408761	45398414	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_45400180_45404726_45404836_45408694
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115736	chr4	+	213	1	Intergenic	novelGene_3551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAGCTCTGCTTCCAGA	NA	False	NA	NA	False	AATAAA	-14	NA	45534936	45535149	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_45534900_45535100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115742	chr4	+	2242	2	FSM	ENSMUSG00000035561.6	ENSMUST00000044384.5	2298	2	56	0	-43	0	multi-exon	FALSE	canonical	3	42	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTATCACTGTTTTCCTT	-27	True	NA	12	True	ATTAAA	-26	NA	45799077	45804604	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_45799170_45802454
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115749	chr4	+	194	1	Intergenic	novelGene_3552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAGAGGACCAGGCTTC	2775	False	NA	NA	False	NA	NA	NA	45801879	45802073	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_45801900_45802100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115758	chr4	-	3714	10	FSM	ENSMUSG00000035495.16	ENSMUST00000107772.8	3726	10	15	-3	-5	3	multi-exon	FALSE	canonical	3	146	junction_3	21.9291789378647	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGGAAGAGTGCTCTGTG	-29	True	NA	0	True	AATAAA	-28	NA	46138460	46114742	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_46117084_46119142_46119282_46119840_46120000_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386_46135595_46138379
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115788	chr4	+	3112	23	FSM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	-94	-8	-94	8	multi-exon	TRUE	canonical	3	296	junction_19	36.3529529761015	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGGTTTATCATCTTAG	16	True	NA	29	True	AATAAA	-29	NA	46138518	46172411	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115800	chr4	-	958	6	FSM	ENSMUSG00000028329.14	ENSMUST00000030013.12	955	6	-3	0	-3	0	multi-exon	FALSE	canonical	3	75	junction_2	5.6	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGATGCAGTCTTCACAGA	1	True	NA	-1	True	AATAAA	-18	NA	46196314	46175221	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_46175416_46183117_46183236_46184287_46184454_46185590_46185697_46193049_46193158_46196048
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115805	chr4	+	175	1	Intergenic	novelGene_3553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACCAAAGCAAGCGGGGT	NA	False	NA	NA	False	NA	NA	NA	46198887	46199062	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_46198900_46199100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115810	chr4	+	208	1	Intergenic	novelGene_3554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAACATTTATCA	NA	False	NA	NA	False	NA	NA	NA	46228599	46228807	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_46228600_46228800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115819	chr4	-	1457	5	FSM	ENSMUSG00000028331.13	ENSMUST00000030015.6	1527	5	13	57	-1	-57	multi-exon	FALSE	canonical	3	91	junction_4	13.5346776836392	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATATTCTTTTTTAATCC	-1	True	NA	NA	False	NA	NA	NA	46389424	46379920	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_46380311_46382058_46382686_46386093_46386252_46387567_46387743_46389317
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115825	chr4	+	1822	7	FSM	ENSMUSG00000028333.11	ENSMUST00000102926.5	1716	7	-101	-5	-101	5	multi-exon	FALSE	canonical	3	5377	junction_1	313.520688666988	1034	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTACTCTCACATTTCTA	NA	False	NA	13	True	AATAAA	-25	NA	46450800	46472662	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115869	chr4	+	210	1	Intergenic	novelGene_3555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTCACTCACAGCAAATC	NA	False	NA	NA	False	TTTAAA	-14	NA	46645171	46645381	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_46645200_46645400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115882	chr4	+	5748	9	FSM	ENSMUSG00000007613.16	ENSMUST00000044234.14	2861	9	-91	-2796	-6	-2	multi-exon	FALSE	canonical	3	99	junction_2	41.6435769357052	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCAACATTCTTTTCTG	NA	False	NA	31	True	AATAAA	-22	NA	47353215	47414929	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_47353397_47383748_47383995_47393258_47393490_47396354_47396586_47402802_47402971_47403369_47403527_47405528_47405654_47406921_47407053_47410651
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115886	chr4	+	5755	9	FSM	ENSMUSG00000007613.16	ENSMUST00000007757.15	5756	9	-3	4	-3	-4	multi-exon	FALSE	canonical	3	114	junction_2	37.2623721064561	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGGCAACATTCTTTTC	NA	False	NA	29	True	AATAAA	-20	NA	47353218	47414927	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_47353397_47383748_47383995_47393246_47393490_47396354_47396586_47402802_47402971_47403369_47403527_47405528_47405654_47406921_47407053_47410651
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115910	chr4	+	583	4	FSM	ENSMUSG00000053317.12	ENSMUST00000065678.6	564	4	-19	0	-19	0	multi-exon	FALSE	canonical	3	2329	junction_2	60.4225859169308	362	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTGCCTGTGCTTTATT	NA	False	NA	NA	False	AATAAA	-25	NA	47474638	47483242	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_47474754_47474911_47475010_47480130_47480233_47482974
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115919	chr4	-	207	1	Intergenic	novelGene_3556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTTTAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	48082040	48081833	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_48081800_48082000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115945	chr4	-	219	1	Intergenic	novelGene_3557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGTGAGAAGCTTGTGG	NA	False	NA	NA	False	AAAAAG	-20	NA	48360706	48360487	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_48360500_48360700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115960	chr4	-	3311	15	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	139	junction_14	171.623282279556	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATGAGCTTCCTTCATA	8	True	NA	-3	True	ATTAAA	-18	NA	48473422	48430857	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473019
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115965	chr4	-	2598	15	NIC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_12	196.22390636355	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATGAGCTTCCTTCATA	2	True	NA	-3	True	ATTAAA	-18	NA	48473428	48430857	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468753_48468994_48469883_48470073_48473265
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115975	chr4	+	495	2	Intergenic	novelGene_3558	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	71	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTTTGTCTTGGTTCCTT	NA	False	NA	17	True	NA	NA	NA	48513813	48519022	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_48514080_48518793
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000115983	chr4	+	1724	3	FSM	ENSMUSG00000039693.12	ENSMUST00000064807.9	1378	3	-3	-343	-3	1	multi-exon	FALSE	canonical	3	126	junction_1	89	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTACACTGTGTATGTTT	-1	True	NA	16	True	NA	NA	NA	48540075	48561920	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_48540272_48552379_48552831_48560843
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116004	chr4	+	2546	10	FSM	ENSMUSG00000028347.15	ENSMUST00000130834.8	1426	10	-454	-666	-77	5	multi-exon	FALSE	canonical	3	335	junction_4	69.1178989163971	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGTGTGCTCATTTAT	-11	True	NA	NA	False	AATATA	-20	NA	48585096	48663136	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_48585642_48604580_48604691_48610412_48610543_48614956_48614984_48617231_48617332_48636839_48636989_48638979_48639046_48650294_48650419_48658773_48658933_48662000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116017	chr4	+	2507	10	FSM	ENSMUSG00000028347.15	ENSMUST00000030032.13	2461	10	-41	-5	-41	5	multi-exon	FALSE	canonical	3	169	junction_4	114.355952842942	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGTGTGCTCATTTAT	25	True	NA	NA	False	AATATA	-20	NA	48585132	48663136	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_48585642_48604580_48604691_48610412_48610543_48614956_48614984_48617234_48617332_48636839_48636989_48638979_48639046_48650294_48650419_48658773_48658933_48662000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116021	chr4	+	2488	10	NNC	ENSMUSG00000028347.15	novel	2461	10	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_7	160.121096149442	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTGCTTTGTGTGCTCA	-21	True	NA	NA	False	AATATA	-15	NA	48585140	48663131	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_48585642_48604580_48604691_48610412_48610543_48614956_48614984_48617234_48617332_48636839_48636989_48638979_48639046_48650300_48650419_48658773_48658933_48662000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116040	chr4	+	183	1	Intergenic	novelGene_3559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGCTGGCTTGCTCATG	9222	False	NA	NA	False	NA	NA	NA	48628152	48628335	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_48628200_48628300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116048	chr4	+	199	1	Intergenic	novelGene_3560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAAGAAAGTTTTTCCC	NA	False	NA	NA	False	NA	NA	NA	48697056	48697255	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_48697100_48697300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116056	chr4	-	2113	2	FSM	ENSMUSG00000044018.4	ENSMUST00000057829.4	2114	2	5	-4	5	4	multi-exon	FALSE	canonical	3	1281	junction_1	0	204	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTAAAGTGTTATTGCTA	-26	True	NA	4	True	AATAAA	-25	NA	49521088	49512591	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_49514578_49520961
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116085	chr4	+	204	1	Intergenic	novelGene_3561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTCCATGGATCTAAAAT	NA	False	NA	NA	False	NA	NA	NA	51782152	51782356	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_51782200_51782400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116105	chr4	+	5409	25	FSM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	-5	0	-5	0	multi-exon	FALSE	canonical	3	347	junction_1	46.9361083164006	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTAGTACTACAGTTT	-24	True	NA	21	True	ATTAAA	-21	NA	52439237	52488260	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_52439411_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116107	chr4	+	5332	25	FSM	ENSMUSG00000028312.20	ENSMUST00000117280.8	5328	25	-4	0	-4	0	multi-exon	FALSE	canonical	3	100	junction_1	79.8595990195014	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTAGTACTACAGTTT	-23	True	NA	21	True	ATTAAA	-21	NA	52439238	52488260	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_52439335_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116117	chr4	+	197	1	Intergenic	novelGene_3562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	400	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCTGAATCTAAGTGAGA	NA	False	NA	NA	False	AAAAAG	-9	NA	52517961	52518158	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_52518000_52518200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116125	chr4	+	1522	6	FSM	ENSMUSG00000015247.11	ENSMUST00000015391.10	1552	6	30	0	30	0	multi-exon	FALSE	canonical	3	527	junction_3	32.5785205311721	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTATCAAGTGAGTCTT	9	False	NA	10	True	AATAAA	-21	NA	53011909	53022060	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_53012048_53015014_53015226_53017048_53017208_53020181_53020332_53021110_53021198_53021283
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116178	chr4	-	186	1	Intergenic	novelGene_3563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCCTGGGTTATTCATTT	NA	False	NA	NA	False	NA	NA	NA	55099905	55099719	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_55099700_55099900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116184	chr4	+	190	1	Intergenic	novelGene_3564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGAGCGGAATTTAGGA	NA	False	NA	NA	False	NA	NA	NA	55200595	55200785	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_55200600_55200800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116191	chr4	+	197	1	Intergenic	novelGene_3565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGCCTGGAGACAAGAG	NA	False	NA	NA	False	NA	NA	NA	55238872	55239069	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_55238900_55239100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116197	chr4	-	173	1	Intergenic	novelGene_3566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCCAGAGAGAGCAGGGA	NA	False	NA	NA	False	NA	NA	NA	55320696	55320523	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_55320500_55320700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116217	chr4	-	2926	4	NIC	ENSMUSG00000003032.9	novel	3029	5	NA	NA	-12	6	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	560.618111254593	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTTTTTTTTTTTC	-3	True	NA	-1	True	AATAAA	-27	NA	55532478	55527136	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_55528301_55529717_55529883_55529998_55530984_55531866
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116239	chr4	-	5060	37	FSM	ENSMUSG00000028431.12	ENSMUST00000030140.3	6160	37	13	1087	13	245	multi-exon	TRUE	canonical	3	245	junction_24	36.3764927995411	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTACTAGCTTTAATTG	9	False	56802327	1	True	ATTAAA	-21	NA	56802318	56750766	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116247	chr4	+	4301	6	FSM	ENSMUSG00000038827.12	ENSMUST00000045368.12	4275	6	-26	0	-22	0	multi-exon	FALSE	canonical	3	125	junction_2	10.8369737473153	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTTTCTGTGTACGTT	1	True	NA	13	True	AATAAA	-22	NA	56802322	56809601	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_56802727_56803595_56803648_56804153_56804284_56805681_56805759_56805877_56805948_56806033
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116259	chr4	-	1807	5	FSM	ENSMUSG00000038816.15	ENSMUST00000131231.2	654	5	52	-1205	52	0	multi-exon	FALSE	canonical	3	19	junction_4	112.62548557054	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATACCGACTGGCTTAAT	NA	False	NA	-6	True	AATAAA	-21	NA	56814267	56810934	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56814169
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116260	chr4	-	3704	19	FSM	ENSMUSG00000038816.15	ENSMUST00000045142.15	3664	19	-40	0	-40	0	multi-exon	FALSE	canonical	3	197	junction_15	25.8110417562564	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATACCGACTGGCTTAAT	9389	False	NA	-6	True	AATAAA	-21	NA	56865228	56810934	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56847809_56848000_56864976
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116266	chr4	-	3383	18	NIC	ENSMUSG00000038816.15	novel	3664	19	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_17	49.5178133688317	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATACCGACTGGCTTAAT	-8	True	NA	-6	True	AATAAA	-21	NA	56846084	56810934	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56845963
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116283	chr4	+	237	1	Intergenic	novelGene_3567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATCACTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	56830434	56830671	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_56830400_56830700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116285	chr4	+	200	1	Intergenic	novelGene_3568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	56845289	56845489	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_56845300_56845500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116298	chr4	+	191	1	Intergenic	novelGene_3569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCATTGGCCAGCAGGC	NA	False	NA	NA	False	NA	NA	NA	56964087	56964278	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_56964100_56964300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116307	chr4	-	3556	16	FSM	ENSMUSG00000028434.13	ENSMUST00000030142.4	3247	16	-316	7	-316	-7	multi-exon	FALSE	canonical	3	116	junction_1	13.208414826247	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTAACAGTTTTTACAAT	-1	True	NA	-7	True	AATAAA	-25	NA	57143753	57061732	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_57063280_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116325	chr4	+	195	1	Intergenic	novelGene_3570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTGTCTTTGCACTCTA	NA	False	NA	NA	False	NA	NA	NA	57294353	57294548	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_57294400_57294500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116336	chr4	-	172	1	Intergenic	novelGene_3571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAGAGAAGAGAAAG	9839	False	NA	NA	False	NA	NA	NA	57933978	57933806	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_57933800_57934000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116342	chr4	-	656	5	FSM	ENSMUSG00000028367.6	ENSMUST00000030051.6	1051	5	11	384	11	-384	multi-exon	TRUE	canonical	3	4612	junction_4	90.890043459116	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGATGTGTTTTAATA	35	False	NA	-3	True	AATAAA	-25	NA	57956400	57943756	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_57943968_57945146_57945213_57950838_57950899_57951796_57951902_57956186
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116350	chr4	-	3447	4	FSM	ENSMUSG00000038668.15	ENSMUST00000055018.11	3512	4	68	-3	22	3	multi-exon	FALSE	canonical	3	120	junction_3	72.8941393772885	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGTTCTGGTCTGTGC	4	True	NA	-2	True	AATAAA	-25	NA	58553289	58435251	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_58437635_58486476_58487225_58504621_58504782_58553133
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116385	chr4	-	5942	49	FSM	ENSMUSG00000050812.19	ENSMUST00000102889.10	7045	49	-16	1119	-16	-1119	multi-exon	FALSE	canonical	3	80	junction_48	23.9024347899725	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTCCTTATTAGCTTT	-38	True	NA	-12	True	AATAAA	-19	NA	58912765	58800029	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58912475
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116392	chr4	-	5711	49	NIC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	0	-1119	combination_of_known_junctions	TRUE	canonical	3	51	junction_48	26.1772719352537	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTCCTTATTAGCTTT	2	True	NA	-12	True	AATAAA	-19	NA	58911927	58800029	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58911868
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116408	chr4	-	1226	10	FSM	ENSMUSG00000028378.7	ENSMUST00000030069.7	2296	10	-8	1078	-8	-1078	multi-exon	FALSE	canonical	3	293	junction_9	57.656068390259	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGTGATAGAGAATGAAAT	-3	True	NA	-5	True	AATAAA	-24	NA	58987127	58966516	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_58966764_58968758_58968878_58970990_58971100_58973534_58973691_58975860_58975979_58978013_58978182_58981826_58981884_58982879_58982926_58984743_58984860_58987037
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116414	chr4	-	192	1	Intergenic	novelGene_3572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTCAAAGTATATATATAT	NA	False	NA	NA	False	NA	NA	NA	59001224	59001032	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_59001000_59001200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116435	chr4	+	150	1	Intergenic	novelGene_3573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATTTAAAAAAAAAACACTG	NA	False	NA	NA	False	NA	NA	NA	59138302	59138452	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_59138300_59138500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116440	chr4	+	197	1	Intergenic	novelGene_3574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAAATGCCTTATGAG	NA	False	NA	NA	False	NA	NA	NA	59148342	59148539	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_59148300_59148500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116448	chr4	+	3812	9	FSM	ENSMUSG00000028381.9	ENSMUST00000030074.8	4012	9	200	0	-101	0	multi-exon	FALSE	canonical	3	208	junction_7	33.8664657146269	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGAGTAATGGACTGGCTT	-41	True	NA	NA	False	AATAAA	-19	NA	59189456	59222833	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_59189742_59207760_59207903_59211875_59211979_59213158_59213261_59213864_59213978_59217035_59217215_59218494_59218582_59219488_59219679_59220222
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116451	chr4	+	242	1	Intergenic	novelGene_3575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	709	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTAGGGCCATGCAGTG	223	False	NA	NA	False	NA	NA	NA	59197785	59198027	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_59197800_59198000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116488	chr4	-	6610	14	FSM	ENSMUSG00000028382.16	ENSMUST00000030076.12	6855	14	76	169	-4	11	multi-exon	FALSE	canonical	3	119	junction_2	23.0463900573291	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTAGTGCATGGTTAAT	1	True	NA	-5	True	ATTAAA	-16	NA	59549288	59472036	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524394_59524477_59549147
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116501	chr4	+	2569	11	FSM	ENSMUSG00000028383.18	ENSMUST00000030078.12	2611	11	42	0	-40	0	multi-exon	FALSE	canonical	3	72	junction_3	12.963024338479	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTATGTGCCTTTTATTTC	10	False	NA	20	True	NA	NA	NA	59581604	59618689	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_59581776_59592154_59592319_59593236_59593336_59594395_59594511_59596862_59596967_59597256_59597356_59601372_59601568_59606471_59606544_59610509_59610876_59612681_59612811_59617634
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116512	chr4	+	3718	4	FSM	ENSMUSG00000045071.15	ENSMUST00000070150.11	10856	4	1	7137	1	1263	multi-exon	FALSE	canonical	3	63	junction_2	17.7200451466693	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGTCTTTAAATTAGTT	-10	True	NA	16	True	ATTAAA	-23	NA	59626211	59754302	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_59626492_59690143_59691339_59737561_59737735_59752232
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116517	chr4	-	3240	5	FSM	ENSMUSG00000038544.15	ENSMUST00000095063.11	3237	5	-3	0	-3	0	multi-exon	FALSE	canonical	3	236	junction_4	41.7814252988095	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTACTGCATATGTTAA	-31	True	NA	NA	False	NA	NA	NA	59783869	59769636	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59782253_59782335_59783727
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116536	chr4	+	7329	9	FSM	ENSMUSG00000028385.15	ENSMUST00000030080.7	7314	9	-12	-3	-12	3	multi-exon	FALSE	canonical	3	98	junction_2	10.264471491509	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTGCTCATTTTTGTCT	820	False	NA	21	True	AATAAA	-30	NA	59805827	59904740	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_59806226_59857444_59857637_59868237_59868349_59879221_59879381_59884979_59885176_59886406_59886607_59892461_59892549_59894524_59894678_59898907
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116558	chr4	-	3580	4	FSM	ENSMUSG00000028389.13	ENSMUST00000221329.2	1776	4	-185	-1619	-100	-5	multi-exon	FALSE	canonical	3	15	junction_3	10.3708994574027	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGTGAAAGTGGTATTT	NA	False	NA	NA	False	ATTAAA	-14	NA	62126783	62107781	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_62110927_62122755_62122888_62123260_62123346_62126565
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116572	chr4	+	1797	4	FSM	ENSMUSG00000066152.12	ENSMUST00000084530.9	1820	4	23	0	23	0	multi-exon	FALSE	canonical	3	73	junction_3	15.369522511198	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGTTGGTCCGTTTC	NA	False	NA	9	True	AATAAA	-20	NA	62204708	62216648	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_62204812_62210868_62210936_62214123_62214314_62215211
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116588	chr4	+	3754	5	FSM	ENSMUSG00000066150.13	ENSMUST00000084526.12	3718	5	-32	-4	-32	4	multi-exon	FALSE	canonical	3	753	junction_3	40.1932830209228	327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTACACACTGTCC	NA	False	NA	27	True	AATAAA	-27	NA	62278931	62310010	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_62279081_62303728_62303916_62304327_62304401_62306103_62306273_62306834
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116596	chr4	-	3041	4	FSM	ENSMUSG00000066149.12	ENSMUST00000084525.12	819	4	17	-2239	0	2239	multi-exon	FALSE	canonical	3	361	junction_3	9.67241208569794	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCTGTTTTCCCTTGAA	2681	False	NA	NA	False	AATAAA	-21	NA	62326862	62310580	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_62313259_62320960_62321153_62322692_62322790_62326788
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116629	chr4	+	185	1	Intergenic	novelGene_3576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCATTCTCTTTCCCCTT	NA	False	NA	NA	False	NA	NA	NA	62373533	62373718	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_62373500_62373700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116654	chr4	-	1802	4	FSM	ENSMUSG00000028394.10	ENSMUST00000030091.10	1805	4	0	3	0	-3	multi-exon	FALSE	canonical	3	309	junction_3	9.56846672960488	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGACTCATACAATGTGC	NA	False	NA	-2	True	AATAAA	-19	NA	62443305	62440888	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_62442348_62442554_62442674_62442986_62443073_62443167
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116658	chr4	+	221	1	Intergenic	novelGene_3577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTTCTCCATGTGGGAA	NA	False	NA	NA	False	NA	NA	NA	62472842	62473063	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_62472800_62473100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116661	chr4	+	4349	23	NIC	ENSMUSG00000059810.19	novel	2072	18	NA	NA	-133	1	combination_of_known_junctions	TRUE	canonical	2	39	junction_18	14.1957973061405	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGTGTATTCCTGGTC	NA	False	NA	2	True	AATAAA	-22	NA	62501704	62621256	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62607735_62608864_62615507_62615570_62618234_62618337_62618590_62618653_62619270_62619438_62620296
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116677	chr4	-	200	1	Intergenic	novelGene_3578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTCCAAGCCAACAGAG	NA	False	NA	NA	False	NA	NA	NA	62901556	62901356	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_62901400_62901600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116693	chr4	+	1051	3	FSM	ENSMUSG00000039105.7	ENSMUST00000035301.7	1135	3	36	48	36	-48	multi-exon	FALSE	canonical	3	4249	junction_2	22.5	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGCTCCTTTTTTTT	NA	False	NA	NA	False	AGTAAA	-20	NA	63463044	63468939	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_63463237_63466821_63466923_63468181
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116706	chr4	+	3765	10	FSM	ENSMUSG00000045917.18	ENSMUST00000077709.11	3765	10	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	11.4901997962622	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGTAAGGGACCATGTT	NA	False	NA	18	True	AATAAA	-18	NA	63477017	63504594	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_63477195_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116714	chr4	-	187	1	Intergenic	novelGene_3579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGGATGAAATAAATATA	NA	False	NA	NA	False	NA	NA	NA	64939936	64939749	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_64939700_64939900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116717	chr4	+	3177	2	FSM	ENSMUSG00000051675.14	ENSMUST00000050850.14	3194	2	17	0	17	0	multi-exon	FALSE	canonical	3	75	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGGTCATGTCTTAATT	NA	False	NA	20	True	AATAAA	-21	NA	65523239	65534475	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_65523307_65531365
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116724	chr4	+	3168	2	FSM	ENSMUSG00000051675.14	ENSMUST00000107366.2	3191	2	23	0	23	0	multi-exon	FALSE	canonical	3	41	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGGTCATGTCTTAATT	NA	False	NA	20	True	AATAAA	-21	NA	65523245	65534475	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_65523307_65531368
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116736	chr4	+	5195	1	Intergenic	novelGene_3580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCGTTTCTTGTGGGTGA	NA	False	NA	NA	False	NA	NA	NA	66820645	66825840	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_66820600_66825800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116745	chr4	+	3470	2	Intergenic	novelGene_3581	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCGTTTCTTGTGGGTGA	NA	False	NA	NA	False	NA	NA	NA	66821213	66825840	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_66821344_66822500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116778	chr4	-	3676	20	NIC	ENSMUSG00000008305.19	novel	3644	20	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	3	22	junction_8	71.9647882503828	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTTCCTCCTTGACTC	NA	False	NA	81	True	AGTAAA	-18	NA	72119129	72036041	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056923_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72075699_72075717_72076449_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116782	chr4	-	3725	20	FSM	ENSMUSG00000008305.19	ENSMUST00000072695.13	3644	20	-81	0	-19	0	multi-exon	FALSE	canonical	3	132	junction_8	62.2917361117158	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTTCCTCCTTGACTC	NA	False	NA	81	True	AGTAAA	-18	NA	72119175	72036041	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72075699_72075717_72076449_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116801	chr4	-	2164	7	FSM	ENSMUSG00000008305.19	ENSMUST00000107337.8	2067	7	-98	1	-41	-1	multi-exon	FALSE	canonical	3	194	junction_1	41.6959896819293	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGCCTGTGTTCTAATT	NA	False	NA	-1	True	AATAAA	-19	NA	72119197	72075817	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116809	chr4	+	190	1	Intergenic	novelGene_3582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAAATCTAGATGTCTGC	NA	False	NA	NA	False	NA	NA	NA	72125885	72126075	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_72125900_72126100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116825	chr4	+	4294	22	FSM	ENSMUSG00000028397.14	ENSMUST00000030102.12	4196	22	-94	-4	-94	4	multi-exon	FALSE	canonical	0	0	junction_5	55.9303502727513	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTTCTGTCTGTCAATTT	NA	False	NA	18	True	ATTAAA	-19	NA	74170078	74324101	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_74170324_74181045_74181207_74189430_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116839	chr4	-	186	1	Intergenic	novelGene_3583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTACAGATATAACTAAT	NA	False	NA	NA	False	NA	NA	NA	74215099	74214913	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_74214900_74215100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116847	chr4	+	203	1	Intergenic	novelGene_3584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGTATTCAACAAATATAAC	NA	False	NA	NA	False	NA	NA	NA	75064789	75064992	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_75064800_75065000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116855	chr4	-	744	2	FSM	ENSMUSG00000028398.9	ENSMUST00000030103.9	741	2	0	-3	0	3	multi-exon	FALSE	canonical	3	402	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTCTTTTAATTTTTCT	NA	False	NA	NA	False	AATAAA	-19	NA	75196542	75195587	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_75196007_75196217
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116862	chr4	+	193	1	Intergenic	novelGene_3585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAGAAGAAGAAGAAGGAG	NA	False	NA	NA	False	NA	NA	NA	75780902	75781095	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_75780900_75781100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116867	chr4	+	1711	2	FSM	ENSMUSG00000048706.4	ENSMUST00000055922.4	3066	2	33	1322	33	-1322	multi-exon	FALSE	canonical	3	28	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCGTGGTTTGTGGTGTTG	NA	False	NA	22	True	AATAAA	-24	NA	80828915	80872543	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_80829883_80871799
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116874	chr4	+	188	1	Intergenic	novelGene_3586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACAAGGCATCAAGCCTA	NA	False	NA	NA	False	NA	NA	NA	81873828	81874016	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_81873800_81874000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116889	chr4	+	188	1	Intergenic	novelGene_3587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGTCAAATTGAGCATCC	NA	False	NA	NA	False	NA	NA	NA	82813951	82814139	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_82814000_82814100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116905	chr4	+	224	1	Intergenic	novelGene_3588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAGAAAATTGGTTCAAG	NA	False	NA	NA	False	NA	NA	NA	83231911	83232135	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_83231900_83232100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116907	chr4	-	3110	1	Intergenic	novelGene_3589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAAGCTTCATGTAGGAC	4287	False	NA	NA	False	NA	NA	NA	83280905	83277795	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_83277800_83280900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116918	chr4	+	2101	9	FSM	ENSMUSG00000028483.14	ENSMUST00000030206.10	1405	9	0	-696	0	3	multi-exon	FALSE	canonical	3	309	junction_6	50.2767341819255	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGTTTAAAAGATTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	83335960	83372273	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123_83360207_83368307_83368473_83369441_83369550_83371277
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116927	chr4	+	927	6	FSM	ENSMUSG00000028483.14	ENSMUST00000071544.11	942	6	13	2	0	-2	multi-exon	FALSE	canonical	3	396	junction_3	22.8875512014719	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGTTTCTAGTCCCCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	83335980	83360321	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116934	chr4	+	190	1	Intergenic	novelGene_3590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAATGATAATAAGAAT	5086	False	NA	NA	False	NA	NA	NA	83347341	83347531	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_83347300_83347500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116947	chr4	-	4497	16	FSM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	-21	-1225	-21	1225	multi-exon	FALSE	canonical	3	958	junction_5	345.826738892951	1102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATCTGTCATCTTTGT	NA	False	NA	2	True	AATAAA	-24	NA	83404717	83372691	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116958	chr4	-	1566	11	NIC	ENSMUSG00000028484.17	novel	1973	11	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	512.655478854952	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTTTTAGGTATTTTT	NA	False	NA	94	True	AATAAA	-19	NA	83404662	83380107	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_83380412_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116964	chr4	-	1861	11	NNC	ENSMUSG00000028484.17	novel	1898	11	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	221	junction_1	470.836925060047	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTTTTAGGTATTTTT	NA	False	NA	94	True	AATAAA	-19	NA	83404712	83380107	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_-_83380657_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116976	chr4	-	1902	11	FSM	ENSMUSG00000028484.17	ENSMUST00000107215.9	1898	11	-4	0	-3	0	multi-exon	FALSE	canonical	3	354	junction_1	432.133081353418	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTTTTAGGTATTTTT	NA	False	NA	94	True	AATAAA	-19	NA	83404699	83380107	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_83380711_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116983	chr4	-	1983	11	FSM	ENSMUSG00000028484.17	ENSMUST00000107214.9	1973	11	-10	0	-4	0	multi-exon	FALSE	canonical	3	116	junction_1	501.525034270474	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTTTTAGGTATTTTT	NA	False	NA	94	True	AATAAA	-19	NA	83404700	83380107	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_83380791_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000116989	chr4	-	3036	10	ISM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	-16	6191	-16	0	5prime_fragment	FALSE	canonical	3	1502	junction_9	115.542200082913	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTTTTAGGTATTTTT	NA	False	NA	94	True	AATAAA	-19	NA	83404712	83380107	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_-_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117001	chr4	+	206	1	Intergenic	novelGene_3591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATGCAATGCCTGGCTA	NA	False	NA	NA	False	NA	NA	NA	83399659	83399865	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_83399700_83399900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117006	chr4	+	195	1	Intergenic	novelGene_3592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGGCTGGTCTCAAACT	NA	False	NA	NA	False	NA	NA	NA	83481656	83481851	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_83481700_83481900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117015	chr4	+	3119	9	FSM	ENSMUSG00000028488.16	ENSMUST00000030212.15	2822	9	-297	0	18	0	multi-exon	FALSE	canonical	3	246	junction_4	17.2191753577226	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGGCTTCTGCTTCTTCC	NA	False	NA	28	True	AATAAA	-18	NA	85123380	85307617	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_85123859_85265360_85265430_85273563_85273637_85294577_85294722_85295630_85295765_85297488_85297648_85299641_85299746_85304026_85304158_85305790
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117026	chr4	-	187	1	Intergenic	novelGene_3593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAATGTGTTTCTGATG	NA	False	NA	NA	False	NA	NA	NA	86103483	86103296	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_86103300_86103500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117041	chr4	+	1608	1	FSM	ENSMUSG00000070934.7	ENSMUST00000091064.8	1618	1	10	0	10	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTTGAAATAATTTGC	NA	False	NA	19	True	AATAAA	-19	NA	86493914	86495522	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_86493900_86495500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117058	chr4	-	1757	8	FSM	ENSMUSG00000028494.13	ENSMUST00000000466.13	1888	8	-2	133	-2	-133	multi-exon	FALSE	canonical	3	453	junction_2	61.6944412539141	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTGGTCTGAGCAGG	NA	False	NA	-13	True	AATAAA	-23	NA	86588299	86574934	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_86575642_86576817_86576953_86578324_86578507_86580170_86580451_86582665_86582749_86586603_86586800_86586886_86586943_86588181
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117063	chr4	+	191	1	Intergenic	novelGene_3594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGATTCTCCACCTGGT	2160	False	NA	NA	False	NA	NA	NA	86579269	86579460	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_86579300_86579500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117075	chr4	+	196	1	Intergenic	novelGene_3595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAAAGCTATGGGTAC	NA	False	NA	NA	False	NA	NA	NA	86721723	86721919	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_86721700_86721900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117083	chr4	-	1448	5	FSM	ENSMUSG00000028495.15	ENSMUST00000102814.5	878	5	-11	-559	-11	559	multi-exon	FALSE	canonical	3	14010	junction_1	3685.72343645043	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCTGCTCTTGATTTTTG	NA	False	NA	-2	True	AGTAAA	-20	NA	86775660	86772337	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_86773193_86774103_86774251_86774382_86774594_86774964_86775097_86775557
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117091	chr4	-	715	5	NNC	ENSMUSG00000028495.15	novel	878	5	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	3	1096	junction_3	7241.45353157776	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGCTTTCATTAATAGT	NA	False	NA	NA	False	AATAAA	-19	NA	86775604	86772898	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_-_86773193_86774103_86774251_86774382_86774478_86774964_86775097_86775557
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117092	chr4	-	1223	4	FSM	ENSMUSG00000028495.15	ENSMUST00000136174.8	1128	4	47	-142	34	-2	multi-exon	FALSE	canonical	3	14010	junction_1	4247.77282820068	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGCTTTCATTAATAGT	NA	False	NA	NA	False	AATAAA	-19	NA	86775535	86772898	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_86773193_86774103_86774251_86774382_86774594_86774964
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117106	chr4	+	718	2	FSM	ENSMUSG00000038007.15	ENSMUST00000135874.2	2943	2	23	2202	23	129	multi-exon	FALSE	canonical	3	467	junction_1	0	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTGGTGTGGTTCAAGA	4143	False	NA	22	True	NA	NA	NA	86848950	86850857	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_86849080_86850268
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117113	chr4	-	204	1	Intergenic	novelGene_3596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTAACACCAAAACTTTT	2498	False	NA	NA	False	NA	NA	NA	87159188	87158984	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_87159000_87159200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117121	chr4	+	5823	44	FSM	ENSMUSG00000038368.17	ENSMUST00000097992.10	5791	44	-27	-5	-26	0	multi-exon	TRUE	canonical	0	0	junction_35	26.0666035463672	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACTTTTATTTTTAAGT	NA	False	NA	15	True	AGTAAA	-24	NA	88012839	88329248	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117136	chr4	-	4184	1	FSM	ENSMUSG00000070923.5	ENSMUST00000094993.3	4174	1	-10	0	-10	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTGTATTGCTTTTTT	NA	False	NA	-1	True	NA	NA	NA	88640712	88636528	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_88636500_88640700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117145	chr4	+	186	1	Intergenic	novelGene_3597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAAGGCCAAAGTGTGG	NA	False	NA	NA	False	NA	NA	NA	88731294	88731480	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_88731300_88731500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117150	chr4	+	2562	8	FSM	ENSMUSG00000062937.8	ENSMUST00000058030.10	2797	8	248	-13	248	13	multi-exon	FALSE	canonical	3	513	junction_1	29.2609651521041	311	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGAGCGTTTGTGTTGG	5296	False	NA	NA	False	NA	NA	NA	89055606	89099331	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_89055762_89066425_89066513_89070245_89070305_89074682_89074851_89089364_89089468_89090381_89090622_89095039_89095163_89097704
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117158	chr4	-	185	1	Intergenic	novelGene_3598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGAGTAGCCCACAGT	NA	False	NA	NA	False	NA	NA	NA	89624028	89623843	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_89623800_89624000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117165	chr4	-	3671	6	NIC	ENSMUSG00000008489.19	novel	3730	7	NA	NA	-6	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	36.2082863444267	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGTGTATCTTTAAATA	NA	False	NA	-1	True	AATAAA	-17	NA	91260277	91139002	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_91141805_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91260136
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117183	chr4	+	206	1	Intergenic	novelGene_3599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATACAATTTGGATTTT	NA	False	NA	NA	False	NA	NA	NA	92489097	92489303	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_92489100_92489300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117186	chr4	-	2092	6	FSM	ENSMUSG00000028578.9	ENSMUST00000030313.9	2107	6	20	-5	-10	5	multi-exon	FALSE	canonical	3	225	junction_2	22.29798197147	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATCTTTTGCTTCATTAC	NA	False	NA	NA	False	AATAAA	-27	NA	94445013	94388312	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_94389654_94409298_94409373_94437355_94437432_94438658_94438744_94439501_94439703_94444698
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117193	chr4	-	1921	4	NIC	ENSMUSG00000028578.9	novel	2107	6	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	128.416855937563	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGATATCTTTTGCTTC	NA	False	NA	NA	False	AATAAA	-22	NA	94445008	94388317	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_94389654_94409298_94409373_94439501_94439703_94444698
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117201	chr4	-	4824	14	FSM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	-19	-2021	-19	368	multi-exon	TRUE	canonical	3	626	junction_12	53.7532164993284	317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACATCTTATTGACTGTA	NA	False	NA	-5	True	AATAAA	-21	NA	94491500	94455382	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117223	chr4	+	225	1	Intergenic	novelGene_3600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGCGGGTCAGAGGGAAA	NA	False	NA	NA	False	ATTAAA	-6	NA	94578259	94578484	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_94578300_94578500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117250	chr4	+	239	1	Intergenic	novelGene_3601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGGAACAGAGAATTCTCA	NA	False	NA	NA	False	NA	NA	NA	98255533	98255772	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_98255500_98255800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117292	chr4	+	188	1	Intergenic	novelGene_3602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATTAGCATTTATAGCCA	NA	False	NA	NA	False	NA	NA	NA	98679844	98680032	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_98679800_98680000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117294	chr4	+	178	1	Intergenic	novelGene_3603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGTGCCACCACTGCTG	9525	False	NA	NA	False	NA	NA	NA	98743475	98743653	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_98743500_98743700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117317	chr4	+	3432	8	NIC	ENSMUSG00000028560.12	novel	3577	9	NA	NA	-75	0	combination_of_known_junctions	FALSE	canonical	3	214	junction_1	120.154492387161	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGATTTTTTTTTTTAA	NA	False	NA	18	True	AATAAA	-24	NA	98811971	98823780	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_98812481_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117321	chr4	+	3619	9	FSM	ENSMUSG00000028560.12	ENSMUST00000030289.9	3577	9	-42	0	-42	0	multi-exon	FALSE	canonical	3	153	junction_1	150.352710318105	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGATTTTTTTTTTTAA	NA	False	NA	18	True	AATAAA	-24	NA	98812004	98823780	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_98812481_98814691_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117348	chr4	+	726	1	Intergenic	novelGene_3604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATTAGTATAAACACCTA	NA	False	NA	NA	False	NA	NA	NA	98887506	98888232	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_98887500_98888200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117356	chr4	+	201	1	Intergenic	novelGene_3605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCCCCATTTGTCCCACA	8882	False	NA	NA	False	NA	NA	NA	98987603	98987804	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_98987600_98987800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117361	chr4	+	204	1	Intergenic	novelGene_3606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATTTTACACTAATTT	NA	False	NA	NA	False	NA	NA	NA	99075552	99075756	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_99075600_99075800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117384	chr4	+	201	1	Intergenic	novelGene_3607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTGGAGGCCAGGCCAG	NA	False	NA	NA	False	NA	NA	NA	99520776	99520977	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_99520800_99521000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117392	chr4	+	190	1	Intergenic	novelGene_3608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTAAGGGTGTTTGCCA	NA	False	NA	NA	False	NA	NA	NA	99537445	99537635	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_99537400_99537600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117405	chr4	+	2537	1	FSM	ENSMUSG00000067261.5	ENSMUST00000087285.5	2324	1	-161	-52	-161	52	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGTGTTTTAATTAGGTG	NA	False	NA	7	True	AATAAA	-17	NA	99544374	99546911	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_99544400_99546900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117429	chr4	+	261	1	Intergenic	novelGene_3609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATATTGGGATAAAGCTT	NA	False	NA	NA	False	NA	NA	NA	99681669	99681930	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_99681700_99681900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117438	chr4	-	187	1	Intergenic	novelGene_3610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAATCATTAACATGAATG	NA	False	NA	NA	False	NA	NA	NA	99742470	99742283	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_99742300_99742500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117445	chr4	+	2342	11	FSM	ENSMUSG00000025791.19	ENSMUST00000058351.16	2371	11	29	0	29	0	multi-exon	TRUE	canonical	3	174	junction_5	14.102836594104	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGTCGCTTTTATTC	NA	False	NA	16	True	ATTAAA	-19	NA	99786639	99844491	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_99787009_99818652_99818816_99819240_99819388_99820714_99820841_99821871_99822063_99824255_99824411_99827183_99827300_99836061_99836198_99839080_99839265_99841165_99841301_99843871
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117459	chr4	+	5773	27	FSM	ENSMUSG00000028532.15	ENSMUST00000030257.15	5765	27	-6	-2	-6	2	multi-exon	FALSE	canonical	3	174	junction_5	18.5926832335326	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTGCTGGTATCTGACG	NA	False	NA	20	True	AATAAA	-22	NA	100633865	100861743	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_100634566_100722178_100722242_100754853_100755003_100775238_100775346_100806269_100806397_100809202_100809348_100810230_100810448_100816646_100816797_100821622_100821857_100823381_100823532_100824142_100824267_100825253_100825372_100828077_100828247_100831202_100831346_100831975_100832158_100833542_100833654_100838167_100838291_100840501_100840602_100840690_100840808_100845278_100845440_100845747_100845835_100846575_100846693_100848020_100848173_100849925_100850088_100851231_100851310_100851931_100852034_100860058
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117467	chr4	+	4047	12	FSM	ENSMUSG00000035275.15	ENSMUST00000038463.15	4045	12	-2	0	-2	0	multi-exon	FALSE	canonical	3	27	junction_5	7.48773101162691	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTAGTATGTTTATTGT	NA	False	NA	8	True	ATTAAA	-18	NA	100926177	101009567	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_100926527_100953449_100953517_100959804_100960275_100964399_100964592_100977649_100977777_100988460_100988544_100990783_100990889_100991051_100991164_100993193_100993451_100994907_100995017_100996291_100996429_101007528
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117474	chr4	-	4918	25	FSM	ENSMUSG00000028530.15	ENSMUST00000102781.10	4906	25	-6	-6	-6	6	multi-exon	FALSE	canonical	3	155	junction_18	17.726657186283	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCCTTTTAATATTAAGC	NA	False	NA	-1	True	AATAAA	-23	NA	101122485	101009557	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211_101016363_101017228_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021654_101021799_101023739_101023847_101028431_101028619_101031282_101031407_101032270_101032429_101034764_101034954_101036651_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101048671_101048871_101050979_101051061_101122238
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117484	chr4	-	2211	1	FSM	ENSMUSG00000065451.3	ENSMUST00000083517.3	83	1	71	-2199	71	2199	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCGTGTATCTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	101204153	101201942	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_101201900_101204200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117500	chr4	+	4108	5	ISM	ENSMUSG00000028527.19	ENSMUST00000106945.8	4175	6	396	-2	9	2	3prime_fragment	FALSE	canonical	3	206	junction_2	35.8355619462009	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGATGGAATTTCATAAAT	NA	False	NA	21	True	AATAAA	-19	NA	101276911	101324194	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_+_101277163_101304356_101304477_101317696_101317870_101320145_101320265_101320749
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117529	chr4	+	1903	4	FSM	ENSMUSG00000035212.15	ENSMUST00000030254.15	1898	4	-5	0	-5	0	multi-exon	FALSE	canonical	3	539	junction_3	48.8011839564939	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGTTGCATTTCATAAA	8210	False	NA	8	True	AATAAA	-20	NA	101504909	101516561	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_101505023_101509595_101509672_101513305_101513493_101515034
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117553	chr4	-	1379	3	NNC	ENSMUSG00000046133.4	novel	913	3	NA	NA	-9902	-3	at_least_one_novel_splicesite	FALSE	canonical	3	182	junction_2	141	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTGTTTTTCTTCTTGA	NA	False	NA	-5	True	ATTAAA	-23	NA	101760888	101747219	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_-_101747741_101747885_101748198_101760342
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117562	chr4	-	1974	3	NNC	ENSMUSG00000078626.3	novel	951	4	NA	NA	9757	1205	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	2.5	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACTGTTTGTTTCTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	101828489	101823444	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_-_101824980_101825125_101825438_101828362
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117567	chr4	+	211	1	Intergenic	novelGene_3611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGGCCAAATTCCATAAT	NA	False	NA	NA	False	NA	NA	NA	102883344	102883555	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_102883300_102883600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117582	chr4	+	4661	13	FSM	ENSMUSG00000028522.17	ENSMUST00000106857.8	4752	13	93	-2	-11	0	multi-exon	FALSE	canonical	3	89	junction_1	18.0662361572323	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGTCTAGTTAT	436	False	NA	17	True	ATTAAA	-18	NA	102976575	103022951	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_102976707_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117598	chr4	+	1912	9	FSM	ENSMUSG00000035069.4	ENSMUST00000035780.4	1915	9	0	3	0	-3	multi-exon	FALSE	canonical	3	69	junction_1	14.2560294261761	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCCTTGCCTTAGTTTG	42	False	NA	13	True	AATAAA	-25	NA	103171008	103223637	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_103171081_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103186034_103186164_103188501_103188577_103210698_103210849_103223169
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117618	chr4	+	200	1	Intergenic	novelGene_3612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTAACACTCTTCCTGTA	NA	False	NA	NA	False	NA	NA	NA	103336129	103336329	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_103336100_103336300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117624	chr4	+	207	1	Intergenic	novelGene_3613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATATCCAGGTTTGTC	NA	False	NA	NA	False	NA	NA	NA	104502370	104502577	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_104502400_104502600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117628	chr4	+	207	1	Intergenic	novelGene_3614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGAGCGAGCGTGTGC	NA	False	NA	NA	False	NA	NA	NA	104664150	104664357	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_104664200_104664400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117653	chr4	+	3247	6	FSM	ENSMUSG00000028517.9	ENSMUST00000064139.8	3159	6	-84	-4	-84	4	multi-exon	FALSE	canonical	3	181	junction_2	17.8616908494129	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGCCTGAGCTGTTAAA	NA	False	NA	17	True	AATAAA	-27	NA	105014459	105089965	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_105015161_105051999_105052158_105065720_105066002_105066396_105066455_105076524_105076702_105088093
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117663	chr4	-	167	1	Intergenic	novelGene_3615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTAAAGGAGCAG	NA	False	NA	NA	False	NA	NA	NA	105461948	105461781	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_105461800_105461900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117677	chr4	+	182	1	Intergenic	novelGene_3616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAATTCAGAGCTGTGC	NA	False	NA	NA	False	NA	NA	NA	106374137	106374319	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_106374100_106374300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117682	chr4	-	187	1	Intergenic	novelGene_3617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGAAGTCTTTTTCTTCC	NA	False	NA	NA	False	NA	NA	NA	106383238	106383051	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_106383100_106383200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117685	chr4	+	4038	9	FSM	ENSMUSG00000034926.4	ENSMUST00000047973.4	4028	9	-10	0	-10	0	multi-exon	FALSE	canonical	3	318	junction_6	36.7353287041235	438	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTGTCATTTATTCAG	NA	False	NA	18	True	AATAAA	-18	NA	106418224	106446310	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_106418595_106421597_106421754_106428608_106428715_106429421_106429541_106430924_106431189_106435386_106435531_106442986_106443185_106443541_106443721_106443808
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117698	chr4	+	2202	2	FSM	ENSMUSG00000043572.8	ENSMUST00000058905.8	2191	2	-11	0	-3	0	multi-exon	FALSE	canonical	3	40	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGTGTGTGTGTGTG	NA	False	NA	5	True	AATAAA	-20	NA	106508291	106512479	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_106508329_106510314
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117710	chr4	+	2208	2	FSM	ENSMUSG00000043572.8	ENSMUST00000106782.2	502	2	37	-1743	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGTGTGTGTGTGTG	NA	False	NA	5	True	AATAAA	-20	NA	106508302	106512479	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_106508346_106510314
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117719	chr4	-	2551	10	FSM	ENSMUSG00000025413.14	ENSMUST00000026480.13	2121	10	24	-454	-19	454	multi-exon	TRUE	canonical	3	276	junction_4	15.561903466677	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	106536117	106518998	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_106520429_106522852_106522936_106524692_106524775_106525233_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794_106533957_106535381_106535500_106535949
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117741	chr4	-	245	1	Intergenic	novelGene_3618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGCTGATTCGCTTTAT	NA	False	NA	NA	False	NA	NA	NA	106622309	106622064	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_106622100_106622300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117752	chr4	-	1497	7	FSM	ENSMUSG00000028622.12	ENSMUST00000030365.6	1498	7	2	-1	2	1	multi-exon	FALSE	canonical	3	549	junction_3	34.5976877840124	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTCTGTGAGATATTAG	NA	False	NA	-7	True	AATAAA	-24	NA	106924063	106913069	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_106913302_106914568_106914773_106917679_106917838_106919079_106919266_106921581_106921698_106921783_106921968_106923646
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117761	chr4	-	4383	6	NIC	ENSMUSG00000028622.12	novel	1498	7	NA	NA	14	3	intron_retention	FALSE	canonical	3	549	junction_2	37.4411538283745	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTGAGATTGTCTGTG	NA	False	NA	-16	True	AATAAA	-15	NA	106924051	106913078	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_106913302_106914568_106917838_106919079_106919266_106921581_106921698_106921783_106921968_106923646
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117766	chr4	-	176	1	Intergenic	novelGene_3619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAGAATTGAC	NA	False	NA	NA	False	NA	NA	NA	106931357	106931181	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_106931200_106931400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117774	chr4	-	1540	5	FSM	ENSMUSG00000028619.16	ENSMUST00000057043.10	6431	5	228	4663	-36	452	multi-exon	FALSE	canonical	3	63	junction_1	11	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAGGCATAGTTTCCCCC	NA	False	NA	NA	False	AATAAA	-17	NA	107035516	106996014	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_106996997_107004711_107004906_107022744_107022887_107034761_107034902_107035434
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117791	chr4	-	1685	8	FSM	ENSMUSG00000028617.11	ENSMUST00000030360.11	1755	8	70	0	70	0	multi-exon	FALSE	canonical	3	194	junction_4	9.55755924781585	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCTTTTGAATTGCAGA	NA	False	NA	-5	True	AATAAA	-20	NA	107110659	107090710	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_107091182_107092996_107093082_107096274_107096389_107096908_107096998_107098098_107098218_107100404_107100537_107104490_107104978_107110471
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117805	chr4	+	1316	10	FSM	ENSMUSG00000057375.14	ENSMUST00000075693.12	1321	10	6	-1	0	0	multi-exon	FALSE	canonical	3	322	junction_9	32.5261528202145	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCCTTCAGCTCTT	NA	False	NA	29	True	AGTAAA	-19	NA	107171565	107217020	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_107171660_107172959_107173040_107176138_107176303_107193310_107193392_107193633_107193722_107198182_107198300_107201708_107201876_107202205_107202389_107207610_107207736_107216803
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117816	chr4	-	374	1	Intergenic	novelGene_3620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	107222445	107222071	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_107222100_107222400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117826	chr4	+	187	1	Intergenic	novelGene_3621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAAGATGGCATTC	NA	False	NA	NA	False	NA	NA	NA	107224457	107224644	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_107224500_107224600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117831	chr4	+	4533	18	FSM	ENSMUSG00000028614.15	ENSMUST00000139560.8	4584	18	58	-7	-38	7	multi-exon	FALSE	canonical	3	529	junction_11	46.6085071760132	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGTGTTTCATTAGC	NA	False	NA	29	True	AATAAA	-40	NA	107225038	107273550	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117846	chr4	+	200	1	Genic_Genomic	ENSMUSG00000028614.15	novel	NA	NA	NA	NA	34692	7	mono-exon	FALSE	NA	NA	NA	NA	NA	265	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGTGTTTCATTAGC	NA	False	NA	29	True	AATAAA	-40	NA	107273350	107273550	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr4_+_107273400_107273600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117880	chr4	+	1385	8	FSM	ENSMUSG00000028608.16	ENSMUST00000135454.8	2997	8	27	1585	-9	-3	multi-exon	FALSE	canonical	3	475	junction_1	98.5130261769001	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATACTTGTGTGTATTTA	NA	False	NA	20	True	NA	NA	NA	107747036	107754996	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_107747094_107747315_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117916	chr4	-	190	1	Antisense	novelGene_ENSMUSG00000008932.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACACACATGCTGTGGGG	NA	False	NA	NA	False	NA	NA	NA	107870374	107870184	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr4_-_107870200_107870400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117928	chr4	-	2660	16	FSM	ENSMUSG00000028603.16	ENSMUST00000030340.15	2640	16	-17	-3	-17	3	multi-exon	TRUE	canonical	3	305	junction_7	132.795314509043	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTTTTACTGTGTATG	NA	False	NA	NA	False	ATTAAA	-19	NA	107975746	107901032	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_107902043_107904786_107904867_107912635_107912766_107921082_107921186_107928453_107928608_107931552_107931661_107942351_107942500_107944208_107944360_107948433_107948521_107950020_107950085_107955218_107955346_107959487_107959553_107962240_107962373_107964813_107964886_107969423_107969482_107975575
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117932	chr4	+	179	1	Intergenic	novelGene_3622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTTAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	107942100	107942279	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_107942100_107942300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117937	chr4	+	206	1	Intergenic	novelGene_3623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTGAGAGAACAAGCCCA	6554	False	NA	NA	False	NA	NA	NA	107975177	107975383	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_107975200_107975400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117942	chr4	+	211	1	Intergenic	novelGene_3624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGGTCAAAATGATTAAGCT	NA	False	NA	NA	False	NA	NA	NA	107996264	107996475	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_107996300_107996500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117952	chr4	+	1289	10	FSM	ENSMUSG00000028601.19	ENSMUST00000052999.13	1307	10	18	0	-11	0	multi-exon	TRUE	canonical	3	713	junction_3	43.9463758530471	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGCTGGAATTGTTGG	NA	False	NA	24	True	AATAAA	-17	NA	108022651	108036505	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_108022859_108026911_108026980_108027057_108027146_108029285_108029373_108030076_108030170_108030991_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108036103
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117958	chr4	+	1562	10	FSM	ENSMUSG00000028601.19	ENSMUST00000130942.8	1319	10	-6	-237	-6	0	multi-exon	FALSE	canonical	3	90	junction_3	222.335582197522	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGCTGGAATTGTTGG	NA	False	NA	24	True	AATAAA	-17	NA	108022656	108036505	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_108022859_108026911_108026980_108027057_108027424_108029285_108029373_108030076_108030170_108030991_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108036103
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000117974	chr4	-	186	1	Intergenic	novelGene_3625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTTAAAAAAAGAATGTGT	NA	False	NA	NA	False	NA	NA	NA	108085144	108084958	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_108085000_108085100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118009	chr4	-	194	1	Intergenic	novelGene_3626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACCTCTGCCTGGCAAA	NA	False	NA	NA	False	NA	NA	NA	108186727	108186533	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_108186500_108186700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118017	chr4	+	202	1	Intergenic	novelGene_3627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTAAAGACTTGTTTAC	7593	False	NA	NA	False	NA	NA	NA	108200673	108200875	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_108200700_108200900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118022	chr4	-	1035	3	FSM	ENSMUSG00000028597.12	ENSMUST00000030332.7	1289	3	233	21	-4	-21	multi-exon	FALSE	canonical	3	159	junction_2	16.5	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGCCCGTGGAAACCT	NA	False	NA	-32	True	AATAAA	-19	NA	108263925	108257607	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_108258195_108260397_108260660_108263739
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118039	chr4	+	5849	30	ISM	ENSMUSG00000034610.15	ENSMUST00000043368.12	6054	31	582	0	-2	0	3prime_fragment	FALSE	canonical	3	91	junction_25	21.0061991869214	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAATTTGGTTAATTCAT	NA	False	NA	15	True	AATAAA	-15	NA	108317204	108416612	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_+_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406437_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118062	chr4	-	212	1	Intergenic	novelGene_3628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAACGTGCTATGGGTTC	NA	False	NA	NA	False	NA	NA	NA	108355761	108355549	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_108355500_108355800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118068	chr4	-	1531	10	FSM	ENSMUSG00000063800.6	ENSMUST00000079213.6	1516	10	-11	-4	-11	4	multi-exon	TRUE	canonical	3	462	junction_7	44.4233283170614	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTTTTGTTTCTTCTCT	NA	False	NA	-4	True	ATTAAA	-24	NA	108436544	108422062	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_108422465_108424101_108424151_108424619_108424718_108424810_108424838_108425554_108425668_108427352_108427464_108430002_108430089_108432565_108432688_108434125_108434286_108436181
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118084	chr4	+	3051	17	FSM	ENSMUSG00000028587.19	ENSMUST00000102744.4	3014	17	-34	-3	-3	3	multi-exon	FALSE	canonical	3	458	junction_7	60.5103296966724	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTATGGTTTGGGGTGCA	5238	False	NA	24	True	NA	NA	NA	108436616	108472033	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118088	chr4	+	2888	16	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	149.780936333329	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTATGGTTTGGGGT	5273	False	NA	21	True	NA	NA	NA	108436651	108472030	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_108436773_108445872_108445979_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118092	chr4	+	192	1	Intergenic	novelGene_3629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCAGGATAGCCAAGCTT	9208	False	NA	NA	False	NA	NA	NA	108440586	108440778	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_108440600_108440800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118101	chr4	+	4919	5	ISM	ENSMUSG00000028587.19	ENSMUST00000102744.4	3014	17	11604	13165	3036	-4375	internal_fragment	FALSE	canonical	3	458	junction_4	83.2901554807049	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATGTCTGCTTCCTGAGT	NA	False	NA	NA	False	NA	NA	NA	108448254	108458865	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_+_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118119	chr4	-	199	1	Intergenic	novelGene_3630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGTAATAATAGTCACTTC	NA	False	NA	NA	False	NA	NA	NA	108586704	108586505	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_108586500_108586700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118124	chr4	+	190	1	Intergenic	novelGene_3631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGTCACGCACTGATAA	NA	False	NA	NA	False	NA	NA	NA	108617272	108617462	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_108617300_108617500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118146	chr4	+	1349	7	FSM	ENSMUSG00000028567.9	ENSMUST00000030296.9	1359	7	8	2	8	-2	multi-exon	FALSE	canonical	3	773	junction_6	37.6592913133296	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGGCCTTTGGTTACT	NA	False	NA	26	True	ATTAAA	-20	NA	108691805	108719322	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_108692054_108703147_108703209_108710365_108710419_108713344_108713419_108715121_108715192_108716471_108716556_108718563
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118158	chr4	+	1576	1	FSM	ENSMUSG00000073775.5	ENSMUST00000102738.4	1629	1	53	0	53	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGGTCTCTTGATGTA	NA	False	NA	9	True	AATAAA	-15	NA	108705034	108706610	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_108705000_108706600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118168	chr4	+	1142	5	FSM	ENSMUSG00000003411.11	ENSMUST00000106650.9	3327	5	49	2136	49	0	multi-exon	FALSE	canonical	3	36	junction_4	5.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCTGCTTGTTTCCTATC	NA	False	NA	7	True	ATTAAA	-18	NA	108736308	108798385	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_108736416_108747504_108747733_108781102_108781222_108786598_108786724_108797822
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118176	chr4	+	184	1	Intergenic	novelGene_3632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTGCAAGAATAAGCTGG	NA	False	NA	NA	False	NA	NA	NA	108760808	108760992	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_108760800_108761000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118187	chr4	+	4042	31	FSM	ENSMUSG00000053510.13	ENSMUST00000065977.11	4311	31	-32	301	-32	1	multi-exon	FALSE	canonical	1	202	junction_11	90.2713440442511	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGCCATCTGCCGTGG	9908	False	NA	21	True	AGTAAA	-23	NA	108857819	108918673	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118189	chr4	+	3918	33	FSM	ENSMUSG00000053510.13	ENSMUST00000106644.9	3784	33	-143	9	-28	-9	multi-exon	FALSE	canonical	1	36	junction_3	173.040085222326	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACGTGTATTTAAAGACG	9912	False	NA	30	True	AATAAA	-22	NA	108857823	108918349	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_108858362_108870706_108871038_108873848_108873983_108874823_108874894_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118211	chr4	-	2838	24	FSM	ENSMUSG00000028559.18	ENSMUST00000030288.14	2871	24	38	-5	0	0	multi-exon	FALSE	canonical	1	25	junction_18	119.667039647815	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTTTCATTGTTTT	NA	False	NA	-1	True	CATAAA	-25	NA	109059431	108918846	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108948857_108948897_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109013851_109013931_109029470_109029522_109059301
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118215	chr4	-	2554	21	FSM	ENSMUSG00000028559.18	ENSMUST00000084366.13	3134	21	75	505	75	0	multi-exon	FALSE	canonical	1	25	junction_18	113.002776514562	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTTTCATTGTTTT	NA	False	NA	-1	True	CATAAA	-25	NA	108975144	108918846	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108948857_108948897_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118218	chr4	-	2802	23	FSM	ENSMUSG00000028559.18	ENSMUST00000162787.9	2408	23	35	-429	-1	0	multi-exon	FALSE	canonical	1	25	junction_17	111.643220473462	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTTTCATTGTTTT	NA	False	NA	-1	True	CATAAA	-25	NA	109059434	108918846	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109013851_109013931_109029470_109029522_109059301
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118234	chr4	+	202	1	Intergenic	novelGene_3633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGTAATTGAAAGGTAAAAA	5788	False	NA	NA	False	NA	NA	NA	108948140	108948342	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_108948100_108948300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118237	chr4	+	1966	9	NNC	ENSMUSG00000028558.15	novel	1606	8	NA	NA	-16148	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_5	5.12195031213697	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCTTGTCTTATTTCTA	NA	False	NA	4	True	TTTAAA	-21	NA	109075533	109111768	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_109075716_109092970_109093073_109095974_109096179_109099353_109099449_109101248_109101459_109101885_109102000_109103344_109103489_109108523_109108617_109110946
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118250	chr4	+	5204	25	FSM	ENSMUSG00000028552.14	ENSMUST00000102729.10	5190	25	-14	0	-14	0	multi-exon	TRUE	canonical	3	117	junction_16	21.9326225188771	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTATCTTGTCCTGTT	NA	False	NA	NA	False	AATAAA	-27	NA	109137450	109245014	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118258	chr4	-	2799	3	FSM	ENSMUSG00000028557.11	ENSMUST00000030284.10	4061	3	-12	1274	-12	527	multi-exon	FALSE	canonical	3	201	junction_2	15	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGTCTCAGATAGTACT	NA	False	NA	NA	False	NA	NA	NA	109333884	109309568	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_109311620_109314094_109314265_109333306
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118267	chr4	-	2062	3	FSM	ENSMUSG00000028551.15	ENSMUST00000097921.10	2471	3	414	-5	414	5	multi-exon	FALSE	canonical	3	20	junction_2	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTGTGATTTTTTTTT	7257	False	NA	NA	False	ATTAAA	-27	NA	109523972	109518067	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_109518824_109522214_109522355_109522806
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118276	chr4	+	183	1	Intergenic	novelGene_3634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGGATCACAGGTATGC	NA	False	NA	NA	False	NA	NA	NA	109529533	109529716	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_109529500_109529700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118286	chr4	+	2574	19	FSM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	-12	1906	-12	-1906	multi-exon	FALSE	canonical	3	1050	junction_10	116.73236245551	363	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGAGTATATGTTCCCC	NA	False	NA	31	True	AATAAA	-23	NA	109533772	109819251	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118290	chr4	+	194	1	Intergenic	novelGene_3635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTTTCATATGAGTCTA	NA	False	NA	NA	False	NA	NA	NA	109583244	109583438	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_109583200_109583400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118295	chr4	+	955	3	Intergenic	novelGene_3636	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	21.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGGAGCATGTGTCCT	NA	False	NA	NA	False	NA	NA	NA	109862637	109866106	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_109862813_109864517_109864840_109865648
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118300	chr4	-	3818	7	NIC	ENSMUSG00000028546.18	novel	4107	7	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	10.286182749473	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGCTTCCCAAATTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	110209124	110060933	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_110063857_110066936_110066976_110068622_110068849_110070324_110070479_110083741_110083846_110108477_110108719_110208993
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118310	chr4	+	2408	13	FSM	ENSMUSG00000034401.17	ENSMUST00000038868.14	2466	13	53	5	-1	3	multi-exon	FALSE	canonical	3	90	junction_2	15.2103309190388	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACCTCTGGTATTTTCA	NA	False	NA	15	True	AATAAA	-30	NA	111577233	111686334	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_111577455_111603337_111603476_111604951_111605001_111624859_111624902_111625912_111626038_111631995_111632077_111636196_111636491_111637951_111638040_111641999_111642041_111656266_111656452_111663127_111663228_111679937_111680030_111685382
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118315	chr4	-	187	1	Intergenic	novelGene_3637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGCCCTGAAGGA	NA	False	NA	NA	False	NA	NA	NA	114365677	114365490	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_114365500_114365700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118322	chr4	-	1911	6	FSM	ENSMUSG00000028719.9	ENSMUST00000030491.9	3170	6	-14	1273	-14	-1273	multi-exon	FALSE	canonical	3	519	junction_1	39.0302446828098	238	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTCTTTTTTCTTTTTT	NA	False	NA	24	True	AATAAA	-43	NA	114844452	114817805	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_114818953_114820261_114820359_114820552_114820630_114822079_114822233_114826414_114826562_114844162
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118335	chr4	+	5296	17	FSM	ENSMUSG00000028718.17	ENSMUST00000030490.13	5285	17	-4	-7	-4	7	multi-exon	TRUE	canonical	3	47	junction_15	11.7923107892389	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTTCTCTTCACTGAAT	NA	False	NA	NA	False	ATTAAA	-24	NA	114857351	114900400	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114866467_114866716_114867260_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114878671_114878787_114880678_114881615_114887065_114887235_114889839_114890069_114895534_114895728_114896264_114896516_114898370
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118351	chr4	-	244	1	Intergenic	novelGene_3638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGAAGCAGAGGTAGG	7758	False	NA	NA	False	AAAAAG	-41	NA	114962756	114962512	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_114962500_114962800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118355	chr4	-	179	1	Intergenic	novelGene_3639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGATTCCTAGCCCTGG	NA	False	NA	NA	False	NA	NA	NA	115219484	115219305	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_115219300_115219500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118361	chr4	+	5708	11	FSM	ENSMUSG00000034210.15	ENSMUST00000106525.9	2792	11	-23	-2893	-23	1	multi-exon	FALSE	canonical	3	140	junction_6	11.0657128102983	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCTGACTAGAATTTTC	NA	False	NA	30	True	AATAAA	-19	NA	115594917	115634525	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118385	chr4	+	196	1	Intergenic	novelGene_3640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTACATGCTGTTATTCC	NA	False	NA	NA	False	NA	NA	NA	115649676	115649872	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_115649700_115649900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118392	chr4	+	187	1	Intergenic	novelGene_3641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGATTTGTAAATGGTGG	1300	False	NA	NA	False	NA	NA	NA	115653619	115653806	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_115653600_115653800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118396	chr4	+	2911	4	FSM	ENSMUSG00000028709.4	ENSMUST00000030477.4	2884	4	-26	-1	-26	1	multi-exon	FALSE	canonical	3	40	junction_1	9.42809041582063	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGTGGGAAGTGGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	115685262	115693383	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_115685439_115688419_115688887_115690829_115691033_115691318
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118427	chr4	+	202	1	Intergenic	novelGene_3642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTGCTCTCAAGGGGCT	4439	False	NA	NA	False	NA	NA	NA	115804681	115804883	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_115804700_115804900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118441	chr4	-	2238	6	FSM	ENSMUSG00000028706.15	ENSMUST00000030475.3	2439	6	43	158	43	5	multi-exon	FALSE	canonical	3	114	junction_2	15.8417170786503	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCGTGCCTTGTCAAT	NA	False	NA	-1	True	AGTAAA	-22	NA	115911030	115890196	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_115891509_115892948_115893074_115897265_115897427_115901881_115902037_115905526_115905862_115910880
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118449	chr4	+	204	1	Intergenic	novelGene_3643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCAGAGTCCCTGATGAG	NA	False	NA	NA	False	NA	NA	NA	115899065	115899269	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_115899100_115899300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118465	chr4	+	2983	10	FSM	ENSMUSG00000028703.15	ENSMUST00000030471.9	3065	10	82	0	82	0	multi-exon	FALSE	canonical	3	193	junction_3	24.5573151707401	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCCCTTCTTGATGATT	NA	False	NA	9	True	AATAAA	-17	NA	115932547	115954240	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_115932805_115936585_115936673_115937745_115937817_115945643_115946767_115950068_115950330_115952073_115952239_115952329_115952429_115952988_115953112_115953339_115953416_115953519
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118473	chr4	-	5419	19	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	1	10	intron_retention	FALSE	canonical	3	105	junction_18	100.421042627873	40	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTTGTTTGCTGTGTAAA	NA	False	NA	-2	True	AATAAA	-30	NA	115980881	115951450	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980697
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118505	chr4	-	2895	19	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-12	20	at_least_one_novel_splicesite	FALSE	canonical	3	105	junction_18	100.421042627873	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGCCTGGGAACACATT	NA	False	NA	-35	True	NA	NA	NA	115980868	115954151	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980514_115980675
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118536	chr4	+	194	1	Intergenic	novelGene_3644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCCAAGGGCTTGGCCC	NA	False	NA	NA	False	NA	NA	NA	115965210	115965404	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_115965200_115965400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118540	chr4	+	189	1	Intergenic	novelGene_3645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGACCCTTTGGAGTGGGG	NA	False	NA	NA	False	NA	NA	NA	115983410	115983599	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_115983400_115983600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118557	chr4	-	178	1	Intergenic	novelGene_3646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTAAAAGGCCGG	5538	False	NA	NA	False	NA	NA	NA	116050804	116050626	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_116050600_116050800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118564	chr4	+	190	1	Intergenic	novelGene_3647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATTGTGTATCAAA	NA	False	NA	NA	False	NA	NA	NA	116053025	116053215	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_116053000_116053200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118568	chr4	+	190	1	Intergenic	novelGene_3648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTTTGCAAGTCCAATG	8286	False	NA	NA	False	NA	NA	NA	116132117	116132307	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_116132100_116132300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118593	chr4	-	2404	10	ISM	ENSMUSG00000003810.14	ENSMUST00000106485.8	5705	29	-39	14595	-39	1076	5prime_fragment	FALSE	canonical	3	250	junction_7	35.0442401177725	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCTGGGAGGAACTGAAA	8448	False	NA	NA	False	NA	NA	NA	116321419	116178554	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_-_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118596	chr4	-	4439	6	ISM	ENSMUSG00000003810.14	ENSMUST00000106486.8	5723	30	-40	27199	-40	-729	5prime_fragment	FALSE	canonical	3	250	junction_3	29.9639783740411	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAGAAACAGGCTTCCCA	8447	False	NA	NA	False	NA	NA	NA	116321420	116191158	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_-_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118599	chr4	-	188	1	Intergenic	novelGene_3649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	116265696	116265508	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_116265500_116265700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118605	chr4	+	197	1	Intergenic	novelGene_3650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAACAACTTCA	NA	False	NA	NA	False	NA	NA	NA	116266509	116266706	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_116266500_116266700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118621	chr4	+	216	1	Intergenic	novelGene_3651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCTAGATTTAAGGAAAGT	NA	False	NA	NA	False	TTTAAA	-8	NA	116377076	116377292	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_116377100_116377300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118641	chr4	-	3150	15	ISM	ENSMUSG00000028693.16	ENSMUST00000030456.14	2520	16	391	-561	-53	4	3prime_fragment	TRUE	canonical	3	774	junction_12	215.450595691155	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTTCTGGAATTATAT	NA	False	NA	NA	False	AATAAA	-20	NA	116484747	116458244	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116468575_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118645	chr4	-	3691	14	NIC	ENSMUSG00000028693.16	novel	2520	16	NA	NA	-1	3	intron_retention	FALSE	canonical	3	774	junction_11	207.002729879378	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGTTCTGGAATTATA	NA	False	NA	NA	False	AATAAA	-19	NA	116484695	116458245	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118662	chr4	-	1560	14	FSM	ENSMUSG00000028693.16	ENSMUST00000030457.12	2118	14	1	557	1	0	multi-exon	FALSE	canonical	3	48	junction_9	345.747385294336	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCTTTGATGGCTTT	NA	False	NA	-7	True	AATAAA	-15	NA	116484693	116458805	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118674	chr4	+	221	1	Intergenic	novelGene_3652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTATTTAGTTGTATTT	NA	False	NA	NA	False	NA	NA	NA	116485949	116486170	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_116485900_116486200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118677	chr4	+	284	1	Intergenic	novelGene_3653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	303	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGACTTTTTAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	116487094	116487378	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_116487100_116487400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118718	chr4	-	240	2	Antisense	novelGene_ENSMUSG00002075917.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	45	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAAGTTCTGGCAGAAGC	9985	False	NA	NA	False	NA	NA	NA	116641631	116553441	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr4_-_116553631_116641580
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118728	chr4	-	1882	4	FSM	ENSMUSG00000028690.5	ENSMUST00000030453.5	2106	4	73	151	-45	-151	multi-exon	TRUE	canonical	3	184	junction_2	7.07106781186548	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTTTGCCTGTTTGTTG	NA	False	NA	2	True	AATACA	-35	NA	116565530	116559626	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_116561065_116561703_116561857_116563077_116563273_116565434
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118740	chr4	+	159	1	ISM	ENSMUSG00000028689.15	ENSMUST00000126197.2	1335	4	1716	4	1410	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTCACTCTTCCTCTA	7387	False	NA	NA	False	NA	NA	NA	116567536	116567695	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_+_116567500_116567700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118748	chr4	-	198	1	Intergenic	novelGene_3654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCACTTCCCTAGTGGT	NA	False	NA	NA	False	NA	NA	NA	116574457	116574259	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_116574300_116574500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118762	chr4	+	194	1	Intergenic	novelGene_3655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGGATAAGGTTGAGAT	5464	False	NA	NA	False	NA	NA	NA	116602244	116602438	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_116602200_116602400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118768	chr4	+	178	1	Intergenic	novelGene_3656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAGTAGAAAGTTAAG	NA	False	NA	NA	False	NA	NA	NA	116610227	116610405	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_116610200_116610400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118775	chr4	+	211	1	Intergenic	novelGene_3657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTTGAAGCCTGAAGTG	5046	False	NA	NA	False	NA	NA	NA	116656567	116656778	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_116656600_116656800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118780	chr4	-	2061	8	FSM	ENSMUSG00000028688.14	ENSMUST00000030451.10	2090	8	29	0	-5	0	multi-exon	FALSE	canonical	3	103	junction_2	11.8252583351856	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGGTTATTTCTTATC	1968	False	NA	0	True	TTTAAA	-42	NA	116664808	116661198	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813_116663957_116664664
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118796	chr4	+	1640	16	FSM	ENSMUSG00000028687.18	ENSMUST00000102699.8	1654	16	14	0	-1	0	multi-exon	FALSE	canonical	3	103	junction_1	29.5893374188894	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTTGGAGAACTTTCTG	NA	False	NA	26	True	AATAAA	-16	NA	116664933	116676628	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_116664969_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118817	chr4	+	232	2	Intergenic	novelGene_3658	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGAGTCATTTTCTTTTT	192	False	NA	NA	False	NA	NA	NA	116686057	116885015	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_116686096_116884821
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118820	chr4	+	184	1	Intergenic	novelGene_3659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATATAACATGGAAAAATT	3600	False	NA	NA	False	NA	NA	NA	116715503	116715687	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_116715500_116715700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118844	chr4	+	189	1	Intergenic	novelGene_3660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTAAAAGTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	116869611	116869800	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_116869600_116869800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118849	chr4	+	1551	12	FSM	ENSMUSG00000028683.15	ENSMUST00000106448.9	1555	12	4	0	-2	0	multi-exon	TRUE	canonical	3	567	junction_7	49.9305302519377	204	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCAGTGGTAGAG	NA	False	NA	20	True	AATAAA	-20	NA	116876602	116944049	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_116876674_116879351_116879510_116885607_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835_116927985_116938754_116938859_116943885
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118856	chr4	-	202	1	Intergenic	novelGene_3661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTTTTTAAATGTTTAT	NA	False	NA	NA	False	TTTAAA	-2	NA	116912078	116911876	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_116911900_116912100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118859	chr4	+	205	1	Intergenic	novelGene_3662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGAGAACAGTGTACT	NA	False	NA	NA	False	NA	NA	NA	116916754	116916959	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_116916800_116917000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118866	chr4	+	212	1	Intergenic	novelGene_3663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGGCGTTATAATGCCG	NA	False	NA	NA	False	AAAAAG	-14	NA	116951073	116951285	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_116951100_116951300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118892	chr4	+	215	1	Intergenic	novelGene_3664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAAAAATTCTGTGCTAG	NA	False	NA	NA	False	NA	NA	NA	117009196	117009411	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_117009200_117009400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118916	chr4	-	1051	5	ISM	ENSMUSG00000047675.16	ENSMUST00000102696.5	860	6	177	12	3	-5	intron_retention	FALSE	canonical	3	11588	junction_2	904.937705038308	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTATGCTGTCTAGGTGTT	NA	False	NA	-25	True	AATAAA	-18	NA	117013263	117011035	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_-_117011185_117011495_117011626_117011834_117012011_117012204_117012305_117012767
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118921	chr4	-	2847	20	FSM	ENSMUSG00000028678.14	ENSMUST00000065896.9	2842	20	3	-8	3	8	multi-exon	FALSE	canonical	3	415	junction_14	29.7897526488705	195	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTGTGTGATTATCAGA	NA	False	NA	96	True	AATAAA	-25	NA	117039833	117016827	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035167_117035341_117035444_117037768_117037864_117039627
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118931	chr4	+	186	1	Intergenic	novelGene_3665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGCACATAAATATATGC	NA	False	NA	NA	False	NA	NA	NA	117018072	117018258	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_117018100_117018300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118936	chr4	+	192	1	Intergenic	novelGene_3666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTAACAAATTTTAGCTGG	NA	False	NA	NA	False	NA	NA	NA	117036232	117036424	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_117036200_117036400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118941	chr4	-	173	1	Intergenic	novelGene_3667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGTTGTTACAACGAGTT	NA	False	NA	NA	False	NA	NA	NA	117098689	117098516	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_117098500_117098700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118955	chr4	-	1894	11	NIC	ENSMUSG00000028677.20	novel	3029	15	NA	NA	-9	1	combination_of_known_junctions	TRUE	canonical	0	0	junction_5	375.814528723944	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTCTGTGTTTGAAGAT	9561	False	NA	NA	False	ATTAAA	-16	NA	117146652	117128658	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222_117146266_117146395
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118964	chr4	-	1974	11	NIC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	343.341753942045	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTCTGTGTTTGAAGAT	9559	False	NA	NA	False	ATTAAA	-16	NA	117146654	117128658	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222_117146266_117146395
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118969	chr4	-	1971	11	FSM	ENSMUSG00000028677.20	ENSMUST00000221654.2	1949	11	-12	-10	-12	1	multi-exon	FALSE	canonical	0	0	junction_5	319.717437747771	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTCTGTGTTTGAAGAT	9558	False	NA	NA	False	ATTAAA	-16	NA	117146655	117128658	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222_117146266_117146399
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118985	chr4	-	3116	15	NIC	ENSMUSG00000028677.20	novel	3029	15	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	471.87085313761	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	NA	False	NA	NA	False	ATTAAA	-14	NA	117354259	117128660	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222_117146266_117153328_117153431_117156741_117156788_117164742_117164876_117346785_117347528_117353879
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118986	chr4	-	1828	10	ISM	ENSMUSG00000028677.20	ENSMUST00000221654.2	1949	11	263	-8	-70	0	3prime_fragment	FALSE	canonical	0	0	junction_5	318.755914977798	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	9833	False	NA	NA	False	ATTAAA	-14	NA	117146380	117128660	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000118990	chr4	-	1888	11	NIC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	357.390878451032	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	9561	False	NA	NA	False	ATTAAA	-14	NA	117146652	117128660	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222_117146266_117146399
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119001	chr4	-	1749	10	ISM	ENSMUSG00000028677.20	ENSMUST00000030439.15	3029	15	207870	1	-69	0	3prime_fragment	FALSE	canonical	0	0	junction_5	365.792425790136	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	9834	False	NA	NA	False	ATTAAA	-14	NA	117146379	117128660	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119018	chr4	+	187	1	Intergenic	novelGene_3668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATCAATTAGTATAGACAA	NA	False	NA	NA	False	NA	NA	NA	117245440	117245627	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_117245400_117245600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119028	chr4	+	1371	9	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-34	2	at_least_one_novel_splicesite	TRUE	canonical	3	99	junction_1	225.311693826574	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTGTCTGGAGCCACC	NA	False	NA	11	True	AATAAA	-18	NA	117407527	117531480	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_117407560_117410164_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119039	chr4	+	1356	9	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-25	2	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_2	270.430097252506	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTGTCTGGAGCCACC	NA	False	NA	11	True	AATAAA	-18	NA	117407536	117531480	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_117407560_117410164_117410241_117421823_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119040	chr4	+	1277	8	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-25	-1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	247.509142276006	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTAGTGTGTCTGGAGCC	NA	False	NA	8	True	AATAAA	-15	NA	117407536	117531477	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_117407560_117421823_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119065	chr4	+	1706	9	NNC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_2	238.585938395371	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTAGTGTGTCTGGAGCC	NA	False	NA	8	True	AATAAA	-15	NA	117407551	117531477	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_117407928_117410164_117410241_117421823_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119066	chr4	+	1715	9	FSM	ENSMUSG00000033423.17	ENSMUST00000037127.15	1719	9	-10	14	-10	2	multi-exon	FALSE	canonical	3	273	junction_1	182.065535934179	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTGTCTGGAGCCACC	NA	False	NA	11	True	AATAAA	-18	NA	117407551	117531480	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_117407928_117410164_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119075	chr4	+	1348	7	NIC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	28	junction_1	264.974212581778	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTAGTGTGTCTGGAGCC	NA	False	NA	8	True	AATAAA	-15	NA	117407561	117531477	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_117407928_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119094	chr4	-	1534	11	FSM	ENSMUSG00000009640.12	ENSMUST00000102687.4	1566	11	32	0	12	0	multi-exon	FALSE	canonical	3	80	junction_10	49.3527101586124	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTGTTTCCTCACTTCC	NA	False	NA	-35	True	AATAGA	-20	NA	117539438	117531877	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_117531992_117532217_117532514_117532623_117532697_117532928_117533001_117533146_117533333_117533546_117533715_117533805_117533965_117538039_117538236_117538470_117538563_117539029_117539180_117539410
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119107	chr4	-	175	1	Intergenic	novelGene_3669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAATCTGATCCTG	NA	False	NA	NA	False	NA	NA	NA	117625728	117625553	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_117625600_117625700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119111	chr4	+	173	1	Intergenic	novelGene_3670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCTAGTTGACTGATACT	NA	False	NA	NA	False	NA	NA	NA	117631116	117631289	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_117631100_117631300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119118	chr4	+	3329	14	FSM	ENSMUSG00000028542.18	ENSMUST00000030269.14	3479	14	150	0	-132	0	multi-exon	FALSE	canonical	2	62	junction_6	13.9750411501337	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGATGTGCTTTGTCT	NA	False	NA	27	True	AATGAA	-21	NA	117692397	117726502	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_117692675_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119127	chr4	-	2300	8	FSM	ENSMUSG00000028541.15	ENSMUST00000030266.12	2312	8	12	0	1	0	multi-exon	FALSE	canonical	3	58	junction_2	8.55951553082585	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTTGTCTGTCTGTGA	NA	False	NA	-9	True	AGTAAA	-17	NA	117740672	117730327	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_117731201_117734076_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117738972_117739015_117740298
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119137	chr4	-	1038	8	FSM	ENSMUSG00000033379.14	ENSMUST00000036380.14	1000	8	-38	0	-34	0	multi-exon	FALSE	canonical	3	2123	junction_7	187.196393650942	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTCTGTTGGCCCC	NA	False	NA	-1	True	AATAAA	-21	NA	117744564	117741522	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472_117743557_117743786_117743836_117744366
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119142	chr4	-	2534	2	ISM	ENSMUSG00000033379.14	ENSMUST00000036380.14	1000	8	8	0	-1	0	intron_retention	FALSE	canonical	3	2592	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTCTGTTGGCCCC	NA	False	NA	-1	True	AATAAA	-21	NA	117744518	117741522	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_-_117741839_117742300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119152	chr4	-	1523	7	ISM	ENSMUSG00000033379.14	ENSMUST00000036380.14	1000	8	8	0	-1	0	intron_retention	FALSE	canonical	3	2536	junction_3	83.3979749287848	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTCTGTTGGCCCC	NA	False	NA	-1	True	AATAAA	-21	NA	117744518	117741522	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472_117743557_117743786
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119174	chr4	-	2996	1	NIC	ENSMUSG00000033379.14	novel	1000	8	NA	NA	-1	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTCTGTTGGCCCC	NA	False	NA	-1	True	AATAAA	-21	NA	117744518	117741522	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_117741500_117744500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119204	chr4	-	2291	6	FSM	ENSMUSG00000028540.7	ENSMUST00000030265.4	2555	6	0	264	0	0	multi-exon	TRUE	canonical	3	66	junction_1	6.70522184569608	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTTCTCTTTATTCAC	NA	False	NA	-7	True	AATAAA	-15	NA	117749229	117746103	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_117746874_117746951_117747129_117747214_117747899_117748091_117748316_117748511_117748625_117748906
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119240	chr4	+	4152	2	Antisense	novelGene_ENSMUSG00000028538.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAAAAAAACATGATTTCC	4558	False	NA	NA	False	NA	NA	NA	117853926	117858118	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr4_+_117856468_117856507
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119244	chr4	+	183	1	Intergenic	novelGene_3671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGAGGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	117899197	117899380	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_117899200_117899400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119265	chr4	+	204	1	Intergenic	novelGene_3672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGCCAGAAGCCCTGTG	NA	False	NA	NA	False	NA	NA	NA	118025319	118025523	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_118025300_118025500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119276	chr4	+	202	1	Intergenic	novelGene_3673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCCGAGGAAACCAGAAG	NA	False	NA	NA	False	NA	NA	NA	118034885	118035087	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_118034900_118035100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119285	chr4	+	186	1	Intergenic	novelGene_3674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCATGACCCAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	118057567	118057753	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_118057600_118057800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119301	chr4	+	1174	7	FSM	ENSMUSG00000006392.17	ENSMUST00000019229.15	1145	7	-29	0	0	0	multi-exon	FALSE	canonical	3	450	junction_1	88.2754527349226	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCATTCCTTGTCCTA	NA	False	NA	32	True	NA	NA	NA	118266533	118272308	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_118266584_118268081_118268201_118268854_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119325	chr4	+	1453	8	FSM	ENSMUSG00000006390.16	ENSMUST00000006557.13	1811	8	23	335	-3	5	multi-exon	FALSE	canonical	3	108	junction_5	11.9505785019225	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTGTGTGTGTGTAAAT	NA	False	NA	6	True	ATTAAA	-19	NA	118285312	118289815	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_118285413_118287692_118287753_118287911_118288103_118288259_118288341_118288462_118288520_118288605_118288712_118288793_118288931_118289094
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119331	chr4	-	1822	10	FSM	ENSMUSG00000006398.16	ENSMUST00000006565.13	1793	10	-22	-7	-22	7	multi-exon	TRUE	canonical	3	1043	junction_4	200.755117703013	843	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCCTTCCTACATGCTTC	NA	False	NA	-4	True	AATAAA	-24	NA	118294571	118290090	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_118290339_118290677_118290796_118291947_118292074_118292669_118292899_118292973_118293069_118293165_118293363_118293456_118293586_118293706_118293804_118293890_118294040_118294137
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119344	chr4	+	2939	9	FSM	ENSMUSG00000028729.16	ENSMUST00000030501.15	2960	9	19	2	19	-2	multi-exon	FALSE	canonical	3	2261	junction_5	110.190105612981	399	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTGGTCATGATGTCTG	NA	False	NA	4	True	NA	NA	NA	118478014	118484971	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_118478195_118478278_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119359	chr4	+	176	1	Intergenic	novelGene_3675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAATTTAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	118873235	118873411	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_118873200_118873400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119382	chr4	-	207	1	Intergenic	novelGene_3676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATCAGCTAAGGAAATAT	NA	False	NA	NA	False	AAGAAA	-13	NA	119014876	119014669	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_119014700_119014900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119386	chr4	-	1588	2	FSM	ENSMUSG00000045268.14	ENSMUST00000106355.5	1588	2	-3	3	-3	0	multi-exon	FALSE	canonical	3	13	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTGTGTACTTATTTGG	NA	False	NA	-1	True	AGTAAA	-16	NA	119031395	119026712	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_119028240_119031334
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119393	chr4	+	677	3	FSM	ENSMUSG00000028643.12	ENSMUST00000030395.9	733	3	56	0	-45	0	multi-exon	FALSE	canonical	3	443	junction_2	4.5	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGTTCTTGCTTTAGAG	NA	False	NA	11	True	AATAAA	-14	NA	119052558	119058495	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_119052684_119053068_119053219_119058093
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119409	chr4	-	766	5	FSM	ENSMUSG00000078584.10	ENSMUST00000141112.2	7151	5	25	6360	-2	180	multi-exon	FALSE	canonical	3	317	junction_4	34.1869858279434	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTAGCTGCTGGTTTTG	NA	False	NA	NA	False	NA	NA	NA	119089884	119083398	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089779
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119417	chr4	+	3223	15	FSM	ENSMUSG00000028641.17	ENSMUST00000121111.9	3188	15	-30	-5	-30	2	multi-exon	FALSE	canonical	3	347	junction_5	38.1110755769586	233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGTTTGTGTATCT	NA	False	NA	6	True	NA	NA	NA	119090081	119106174	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_119090628_119092442_119092596_119093973_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104783_119105087
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119425	chr4	+	190	1	Intergenic	novelGene_3677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTATTCCTTCATATGGA	4169	False	NA	NA	False	NA	NA	NA	119124605	119124795	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_119124600_119124800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119429	chr4	-	2222	8	FSM	ENSMUSG00000028639.15	ENSMUST00000079644.13	1628	8	61	-655	-43	655	multi-exon	FALSE	canonical	3	9851	junction_2	327.608589257214	2243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGATTGTGTTTAATAT	NA	False	NA	NA	False	NA	NA	NA	119151740	119134522	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119438	chr4	-	1539	8	NIC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	3	262	junction_2	3531.96674123986	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGTTTTGTCATAATTGA	NA	False	NA	NA	False	AATAAA	-18	NA	119151698	119135175	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_119135565_119136130_119136409_119138766_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119450	chr4	-	4094	6	NIC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	9851	junction_2	381.446510011561	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGTTTTGTCATAATT	NA	False	NA	NA	False	AATAAA	-16	NA	119151697	119135177	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342_119142340_119150938_119151003_119151400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119451	chr4	-	1434	7	NIC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	192	junction_4	3779.60040877339	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGTTTTGTCATAATT	NA	False	NA	NA	False	AATAAA	-16	NA	119151697	119135177	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342_119139646_119142305_119142340_119150938_119151003_119151400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119472	chr4	+	210	1	Intergenic	novelGene_3678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	274	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATCAAACCAACACAGAG	645	False	NA	NA	False	NA	NA	NA	119137708	119137918	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_119137700_119137900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119479	chr4	+	214	1	Intergenic	novelGene_3679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAAACCCAAACAACCAA	9429	False	NA	NA	False	NA	NA	NA	119146492	119146706	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_119146500_119146700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119480	chr4	+	191	1	Intergenic	novelGene_3680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTATTTTTTGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	119155209	119155400	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_119155200_119155400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119488	chr4	-	753	10	FSM	ENSMUSG00000060288.14	ENSMUST00000106318.8	800	10	47	0	0	0	multi-exon	TRUE	canonical	2	32	junction_8	163.771144144263	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTCTGTAGTTACTATT	9629	False	NA	-3	True	AATAAA	-19	NA	119177696	119157206	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_119157381_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365_119177431_119177605
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119495	chr4	-	229	1	Intergenic	novelGene_3681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCATCCCTCTCTCCTCA	NA	False	NA	NA	False	NA	NA	NA	119157651	119157422	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_119157400_119157700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119503	chr4	+	232	1	Intergenic	novelGene_3682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	288	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGACAGCAGCTGACAGA	NA	False	NA	4	True	NA	NA	NA	119227055	119227287	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_119227100_119227300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119512	chr4	-	191	1	Intergenic	novelGene_3683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATATTGACTCCTCAAAAC	9762	False	NA	NA	False	NA	NA	NA	119247401	119247210	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_119247200_119247400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119517	chr4	-	1452	3	FSM	ENSMUSG00000028636.15	ENSMUST00000030385.13	1443	3	-6	-3	-6	3	multi-exon	FALSE	canonical	3	273	junction_2	22	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGTTTCTGGTTTTTTGTT	5499	False	NA	-1	True	AATAAA	-33	NA	119279623	119275723	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_119276491_119278776_119278881_119279042
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119527	chr4	-	4118	5	FSM	ENSMUSG00000048899.9	ENSMUST00000049994.8	4097	5	-17	-4	-17	4	multi-exon	TRUE	canonical	3	32	junction_2	4.35889894354067	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTATGTCTTGTCTGATT	9956	False	NA	0	True	AATATA	-28	NA	119349842	119322475	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_119325723_119327663_119327868_119331715_119331803_119334987_119335219_119349493
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119534	chr4	-	213	1	Intergenic	novelGene_3684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCCATTGCTAGATCGC	NA	False	NA	NA	False	AAAACA	-13	NA	119367501	119367288	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_119367300_119367500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119543	chr4	+	235	1	Intergenic	novelGene_3685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	778	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTATGTCCTATTTCTTT	NA	False	NA	NA	False	AAAAAG	-38	NA	119390222	119390457	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_119390200_119390500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119552	chr4	+	4692	12	FSM	ENSMUSG00000032998.17	ENSMUST00000106310.9	4660	12	-32	0	-5	0	multi-exon	FALSE	canonical	3	63	junction_5	23.2197550545519	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCAGCCTGATGGTCTGT	NA	False	NA	23	True	AATAAA	-19	NA	119396852	119486316	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_119397043_119417799_119417861_119430672_119430998_119442946_119443022_119459605_119459690_119473704_119473834_119476480_119476662_119477131_119477546_119478797_119478900_119480417_119480610_119482093_119482202_119483485
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119554	chr4	+	4793	13	FSM	ENSMUSG00000032998.17	ENSMUST00000044564.15	4789	13	-4	0	-4	0	multi-exon	FALSE	canonical	3	55	junction_6	28.6078611962206	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCAGCCTGATGGTCTGT	NA	False	NA	23	True	AATAAA	-19	NA	119396853	119486316	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_119397043_119417799_119417861_119430672_119430998_119442946_119443022_119459605_119459690_119467186_119467289_119473704_119473834_119476480_119476662_119477131_119477546_119478797_119478900_119480417_119480610_119482093_119482202_119483485
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119569	chr4	-	3015	2	FSM	ENSMUSG00000052135.9	ENSMUST00000102656.4	2615	2	-399	-1	-399	1	multi-exon	FALSE	canonical	3	61	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGAGCCTTGGGTTAGGAG	NA	False	NA	0	True	AATAAA	-17	NA	120144945	120124274	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_120126380_120144035
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119586	chr4	-	224	1	Intergenic	novelGene_3686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTGTTGTTGGTGG	NA	False	NA	NA	False	NA	NA	NA	120289288	120289064	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_120289100_120289300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119592	chr4	-	260	1	Intergenic	novelGene_3687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTCCCAACTTTTCATA	NA	False	NA	NA	False	NA	NA	NA	120368972	120368712	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_120368700_120369000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119607	chr4	-	3477	19	NNC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	303	0	at_least_one_novel_splicesite	TRUE	canonical	3	24	junction_18	179.180610999139	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGCTTTCTCTTGTC	NA	False	NA	-18	True	AATAAA	-14	NA	120427170	120397064	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120426272
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119614	chr4	+	222	1	Intergenic	novelGene_3688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATCATACAAACCTCAATA	NA	False	NA	NA	False	TTTAAA	-10	NA	120419739	120419961	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_120419700_120420000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119616	chr4	+	1251	1	FSM	ENSMUSG00000070803.7	ENSMUST00000094814.6	1249	1	-2	0	-2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAGTTTCCATTTCCTT	6117	False	NA	9	True	AATAAA	-18	NA	120523766	120525017	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_120523800_120525000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119624	chr4	-	1970	10	FSM	ENSMUSG00000032897.18	ENSMUST00000043429.12	1932	10	-35	-3	-34	3	multi-exon	TRUE	canonical	3	393	junction_8	23.5424491839793	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCTGGGACATTCAT	NA	False	NA	2	True	AATAAA	-23	NA	120682938	120614631	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120682726
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119646	chr4	+	6488	8	FSM	ENSMUSG00000032890.18	ENSMUST00000071093.9	6505	8	18	-1	18	1	multi-exon	FALSE	canonical	3	28	junction_6	8.02546966010751	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGGCTTTCTGAGGATG	NA	False	NA	17	True	AATAAA	-22	NA	120712033	120753777	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_120712320_120729673_120729848_120735034_120735283_120740271_120740414_120744130_120744241_120746184_120746287_120746551_120746692_120748491
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119653	chr4	-	2007	2	FSM	ENSMUSG00000028629.10	ENSMUST00000030375.9	1996	2	-11	0	1	0	multi-exon	FALSE	canonical	3	95	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGATGTTTGTGTG	NA	False	NA	-9	True	AATAAA	-22	NA	120782213	120778392	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_120779894_120781707
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119666	chr4	+	197	1	Intergenic	novelGene_3689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATGCGTTTATTTATGG	NA	False	NA	NA	False	NA	NA	NA	120807697	120807894	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_120807700_120807900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119678	chr4	-	201	2	Antisense	novelGene_ENSMUSG00000028626.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTATAAGGATGCTGAAG	NA	False	NA	NA	False	NA	NA	NA	120905919	120855854	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr4_-_120856039_120905902
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119681	chr4	+	221	1	Intergenic	novelGene_3690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAGTTACTAACTTCTTG	NA	False	NA	NA	False	NA	NA	NA	120865153	120865374	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_120865200_120865400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119686	chr4	+	2678	32	FSM	ENSMUSG00000028626.6	ENSMUST00000030372.6	2924	32	246	0	-117	0	multi-exon	FALSE	canonical	3	39	junction_2	8.6239508704552	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTCTTGTGGATGAGG	NA	False	NA	21	True	AATAAA	-22	NA	120896827	120912519	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_120896984_120898161_120898237_120899490_120899527_120899612_120899676_120900892_120900947_120901058_120901095_120901191_120901216_120901471_120901526_120901861_120901916_120902019_120902068_120902195_120902253_120902337_120902392_120902680_120902735_120903122_120903177_120903266_120903321_120903425_120903480_120906858_120906913_120907272_120907327_120907551_120907606_120908410_120908456_120908847_120908902_120909164_120909219_120909423_120909478_120909554_120909627_120909777_120909814_120909949_120909995_120910087_120910121_120910254_120910402_120910635_120910691_120910966_120911156_120911449_120911528_120911792
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119710	chr4	-	6285	8	FSM	ENSMUSG00000049878.14	ENSMUST00000056635.13	6242	8	-43	0	-43	0	multi-exon	FALSE	canonical	3	142	junction_1	23.3290569453457	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTTACTCATAGAGTCT	6421	False	NA	-1	True	AATAAA	-18	NA	121072324	121003079	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_121008220_121012052_121012195_121016388_121016526_121027814_121028018_121039802_121039936_121045411_121045494_121047300_121047456_121072031
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119725	chr4	-	3304	7	ISM	ENSMUSG00000049878.14	ENSMUST00000056635.13	6242	8	1	6770	1	-6770	5prime_fragment	FALSE	canonical	3	168	junction_3	17.3557547292598	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTAGAAGGAAAGAATATG	6465	False	NA	NA	False	NA	NA	NA	121072280	121009849	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_-_121012195_121016388_121016526_121027814_121028018_121039802_121039936_121045411_121045494_121047300_121047456_121072031
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119730	chr4	+	2297	9	FSM	ENSMUSG00000028657.15	ENSMUST00000030412.11	2381	9	-1	85	-1	-85	multi-exon	FALSE	canonical	3	268	junction_2	20.6579282601136	240	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTATCATTTTCAGTAT	NA	False	NA	18	True	AATAAA	-16	NA	122730033	122752786	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_122730173_122737787_122737898_122738210_122738339_122739763_122739835_122742225_122742329_122747383_122747475_122748172_122748272_122749598_122749671_122751302
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119760	chr4	-	2565	13	FSM	ENSMUSG00000028656.15	ENSMUST00000069533.12	2620	13	48	7	1	-7	multi-exon	FALSE	canonical	3	217	junction_12	208.332399997909	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTATTCACCTGATGTT	NA	False	NA	-14	True	AATAAA	-18	NA	122779656	122752846	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766247_122779606
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119779	chr4	+	182	1	Intergenic	novelGene_3691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAGGAGAAGA	1445	False	NA	NA	False	NA	NA	NA	122887710	122887892	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_122887700_122887900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119787	chr4	+	3196	3	FSM	ENSMUSG00000028654.14	ENSMUST00000106252.9	3293	3	97	0	-58	0	multi-exon	FALSE	canonical	3	37	junction_1	34.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGAGTGGGGGTAGCAT	3568	False	NA	NA	False	AATAAA	-18	NA	122889833	122896278	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_122889944_122890306_122890812_122893697
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119793	chr4	+	3537	2	FSM	ENSMUSG00000028654.14	ENSMUST00000030407.8	3501	2	-36	0	-36	0	multi-exon	FALSE	canonical	3	106	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGAGTGGGGGTAGCAT	3590	False	NA	NA	False	AATAAA	-18	NA	122889855	122896278	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_122890812_122893697
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119798	chr4	+	208	1	Intergenic	novelGene_3692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAACAATACATAGCCTT	NA	False	NA	NA	False	ATTAAA	-12	NA	122952248	122952456	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_122952200_122952500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119815	chr4	-	1179	10	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	canonical	3	100	junction_9	309.335169215497	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGCCTCCTGCAAGTTG	NA	False	NA	-14	True	AATAAA	-25	NA	123033743	123020907	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030664_123030692_123031318_123031363_123032658_123032758_123033702
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119836	chr4	+	134	1	Intergenic	novelGene_3693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAACTCCAACTATG	NA	False	NA	NA	False	NA	NA	NA	123148823	123148957	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_123148800_123149000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119839	chr4	+	178	1	Intergenic	novelGene_3694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCGGAGGGAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	123152124	123152302	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_123152100_123152300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119842	chr4	+	3206	15	FSM	ENSMUSG00000011257.20	ENSMUST00000080178.13	3019	15	-187	0	-101	0	multi-exon	FALSE	canonical	3	253	junction_1	59.8703105189263	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATGCCAGTTTTATGTT	NA	False	NA	8	True	AATAAA	-31	NA	123176516	123192625	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191887_123192305
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119852	chr4	+	3086	15	FSM	ENSMUSG00000011257.20	ENSMUST00000106241.8	3050	15	-46	10	-39	0	multi-exon	FALSE	canonical	3	39	junction_10	103.994922364272	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGCTGAATTTGATGCCA	NA	False	NA	-2	True	AATAAA	-21	NA	123176578	123192615	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189067_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191887_123192305
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119854	chr4	+	3092	15	NNC	ENSMUSG00000011257.20	novel	3019	15	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_14	92.6910602650613	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGCTGAATTTGATGCCA	NA	False	NA	-2	True	AATAAA	-21	NA	123176578	123192615	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191845_123192305
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119855	chr4	+	3047	14	FSM	ENSMUSG00000011257.20	ENSMUST00000106243.8	3111	14	-39	103	-39	0	multi-exon	FALSE	canonical	3	64	junction_10	102.125111806737	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGCTGAATTTGATGCCA	NA	False	NA	-2	True	AATAAA	-21	NA	123176578	123192615	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189722_123189851_123191471_123191566_123191653_123191887_123192305
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119878	chr4	+	197	1	Intergenic	novelGene_3695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACAAGGGCAAATGTAGA	491	False	NA	NA	False	NA	NA	NA	123184221	123184418	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_123184200_123184400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119895	chr4	-	179	1	Intergenic	novelGene_3696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAGAAGATGATGATGA	NA	False	NA	NA	False	NA	NA	NA	123266573	123266394	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_123266400_123266600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119897	chr4	-	2597	2	NIC	ENSMUSG00000028649.22	novel	14463	70	NA	NA	-7632	5830	intron_retention	FALSE	canonical	3	168	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTGCATGCTATTATCTC	NA	False	NA	NA	False	ATTAAA	-2	NA	123273792	123271091	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_123272346_123272449
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119905	chr4	+	205	1	Intergenic	novelGene_3697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGATGTGAGCTGGGC	NA	False	NA	NA	False	NA	NA	NA	123397740	123397945	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_123397700_123397900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119911	chr4	-	188	1	Intergenic	novelGene_3698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGACATGGCTCAGTTGT	NA	False	NA	NA	False	NA	NA	NA	123551188	123551000	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_123551000_123551200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119922	chr4	+	184	1	Intergenic	novelGene_3699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAACTGGGTTTACTTTT	NA	False	NA	NA	False	NA	NA	NA	123553454	123553638	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_123553500_123553600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119947	chr4	-	183	1	Intergenic	novelGene_3700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTAGCCAGGGATGGTG	NA	False	NA	NA	False	NA	NA	NA	123650525	123650342	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_123650300_123650500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119951	chr4	-	177	1	Intergenic	novelGene_3701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGTTAAGTTACGC	NA	False	NA	NA	False	NA	NA	NA	123651236	123651059	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_123651100_123651200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119964	chr4	+	2615	7	FSM	ENSMUSG00000028646.17	ENSMUST00000030399.7	2593	7	-22	0	-22	0	multi-exon	FALSE	canonical	3	488	junction_1	23.3553467587664	382	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGTTGTGTGATGTGT	NA	False	NA	20	True	AATAAA	-20	NA	123811216	123830790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_123811561_123813641_123813846_123814743_123814944_123817752_123817868_123818539_123818683_123823624_123823774_123829330
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119980	chr4	+	188	1	Intergenic	novelGene_3702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTTGACTAGTTCCACT	4313	False	NA	NA	False	NA	NA	NA	123952294	123952482	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_123952300_123952500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119988	chr4	-	458	2	Intergenic	novelGene_3703	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	373	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTAGCTCCGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	124252215	124246960	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_124247180_124251976
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000119996	chr4	-	5255	1	Intergenic	novelGene_3704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTAGCTCCGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	124252215	124246960	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_124247000_124252200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120011	chr4	+	126	1	Intergenic	novelGene_3705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGTAAAGAAATGCATCC	NA	False	NA	NA	False	NA	NA	NA	124485122	124485248	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_124485100_124485200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120022	chr4	+	219	1	Intergenic	novelGene_3706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTTTTTATGTTTGAAAA	NA	False	NA	NA	False	AAAAAG	-24	NA	124563522	124563741	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_124563500_124563700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120029	chr4	-	1607	8	FSM	ENSMUSG00000028907.8	ENSMUST00000030738.8	1603	8	0	-4	0	4	multi-exon	FALSE	canonical	3	1259	junction_4	134.593264834372	401	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	AGTAAA	-2	NA	124587393	124571948	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_124572780_124573494_124573606_124575985_124576117_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120040	chr4	+	191	1	Intergenic	novelGene_3707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTACAGAGAATCAGAAG	NA	False	NA	NA	False	NA	NA	NA	124607864	124608055	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_124607900_124608100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120043	chr4	+	1818	17	FSM	ENSMUSG00000028902.5	ENSMUST00000030734.5	1820	17	0	2	0	-2	multi-exon	FALSE	canonical	3	1027	junction_12	104.342509913266	367	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTTTATGAATTTTTTG	NA	False	NA	49	True	AATAAA	-36	NA	124608568	124626251	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_124608784_124609061_124609110_124609444_124609498_124609602_124609709_124610243_124610317_124612120_124612213_124615816_124615900_124616670_124616810_124617463_124617533_124618551_124618620_124618867_124618976_124620771_124620842_124621866_124622032_124622111_124622223_124623251_124623343_124625163_124625220_124625980
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120054	chr4	+	3009	18	ISM	ENSMUSG00000028894.19	ENSMUST00000094782.10	3809	24	9734	0	9706	0	3prime_fragment	FALSE	canonical	3	118	junction_11	23.4933547256022	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGGTTCTCTCTTTTTTT	NA	False	NA	22	True	AATATA	-30	NA	124645376	124695304	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_+_124645486_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124687203_124689148_124689263_124691617_124691703_124692044_124692173_124693560_124693673_124694498
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120082	chr4	+	1574	5	FSM	ENSMUSG00000028889.18	ENSMUST00000102628.11	1634	5	68	-8	68	8	multi-exon	FALSE	canonical	3	475	junction_1	43.7121264639459	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTATTTTTCTTTTGAG	1602	False	NA	51	True	ATTAAA	-26	NA	124744539	124749043	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_124744960_124745485_124745601_124745692_124745813_124747666_124747810_124748267
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120089	chr4	-	3023	4	FSM	ENSMUSG00000042763.10	ENSMUST00000064444.8	2727	4	-119	-177	-119	177	multi-exon	FALSE	canonical	3	84	junction_3	2.49443825784929	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAGATTTTATTTTTCAA	NA	False	NA	NA	False	AATAAA	-25	NA	124756083	124748854	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_124751033_124752923_124753001_124754156_124754267_124755425
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120098	chr4	+	245	1	Intergenic	novelGene_3708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTAAAATGGCAGTACATA	9606	False	NA	NA	False	NA	NA	NA	124761234	124761479	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_124761200_124761500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120107	chr4	+	205	1	Intergenic	novelGene_3709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCGTTTTATGCACACGA	NA	False	NA	NA	False	AATAAA	-7	NA	124766016	124766221	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_124766000_124766200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120114	chr4	+	189	1	Intergenic	novelGene_3710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTAGTTGAGGCCGGGC	NA	False	NA	NA	False	NA	NA	NA	124770441	124770630	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_124770400_124770600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120119	chr4	+	180	1	Intergenic	novelGene_3711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATAAGGGGAGGCCAACC	442	False	NA	NA	False	NA	NA	NA	124799297	124799477	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_124799300_124799500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120122	chr4	-	1640	10	FSM	ENSMUSG00000028873.17	ENSMUST00000084296.10	1626	10	-4	-10	-4	10	multi-exon	FALSE	canonical	3	1430	junction_6	123.940846105444	457	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGCATTCACTCTGGTT	NA	False	NA	0	True	AATAAA	-36	NA	124830714	124812247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_124812824_124813405_124813493_124814051_124814179_124815004_124815098_124815792_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120152	chr4	+	2370	16	FSM	ENSMUSG00000028869.14	ENSMUST00000030684.8	2366	16	4	-8	4	4	multi-exon	FALSE	canonical	3	650	junction_4	51.4673575083168	501	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTCGCTTTCTTGTGC	NA	False	NA	32	True	ATTAAA	-26	NA	124923788	124949177	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_124923988_124928030_124928116_124929007_124929103_124931314_124931455_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124946649_124947247_124947328_124947934_124948021_124948976
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120162	chr4	+	2326	4	FSM	ENSMUSG00000050213.7	ENSMUST00000052183.7	2345	4	19	0	-11	0	multi-exon	FALSE	canonical	3	77	junction_1	6.84754619472471	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGAGGGTATTACTTTT	NA	False	NA	14	True	AATAAA	-20	NA	124960483	124967835	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_124960746_124961882_124961986_124964899_124965484_124966458
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120175	chr4	+	1244	8	FSM	ENSMUSG00000028863.14	ENSMUST00000184205.8	1054	8	-12	-178	1	3	multi-exon	FALSE	canonical	3	93	junction_6	102.612805025016	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCAGCTGCCTCTTTGGC	NA	False	NA	43	True	ACTAAA	-19	NA	124978944	125003685	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125001444_125001503_125002115_125002150_125003091
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120197	chr4	-	199	1	Intergenic	novelGene_3712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCAGAGCTATCATAGGAC	NA	False	NA	NA	False	NA	NA	NA	124982415	124982216	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_124982200_124982400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120215	chr4	-	198	1	Intergenic	novelGene_3713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTGCTTGAGCCAGCAA	NA	False	NA	NA	False	NA	NA	NA	125165830	125165632	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_125165600_125165800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120225	chr4	+	202	1	Intergenic	novelGene_3714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	388	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTAGCCTCAATCCAGA	4417	False	NA	NA	False	NA	NA	NA	125449773	125449975	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_125449800_125450000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120230	chr4	+	927	8	FSM	ENSMUSG00000028861.14	ENSMUST00000030675.8	937	8	22	-12	22	12	multi-exon	FALSE	canonical	3	1282	junction_7	51.9186962510439	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATGGCCTTCTTTTTAA	NA	False	NA	39	True	AATAAA	-24	NA	125940739	125949337	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_125940993_125941226_125941272_125942427_125942507_125944272_125944322_125945117_125945203_125947292_125947352_125948753_125948946_125949172
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120245	chr4	-	199	1	Intergenic	novelGene_3715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGTGTGCTGGCACATA	NA	False	NA	NA	False	NA	NA	NA	125958428	125958229	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_125958200_125958400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120275	chr4	+	892	3	FSM	ENSMUSG00000050212.5	ENSMUST00000106152.3	1364	3	472	0	-57	0	multi-exon	FALSE	canonical	3	244	junction_1	47.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTCTCACTGGTTAC	7073	False	NA	21	True	AATGAA	-16	NA	126042267	126043668	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_126042425_126042743_126042839_126043028
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120281	chr4	+	959	3	FSM	ENSMUSG00000050212.5	ENSMUST00000052876.3	1689	3	731	-1	-57	0	multi-exon	FALSE	canonical	3	53	junction_1	143	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTCTCACTGGTTAC	7073	False	NA	21	True	AATGAA	-16	NA	126042267	126043668	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_126042425_126042676_126042839_126043028
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120287	chr4	-	198	1	Intergenic	novelGene_3716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGGGTAAAGCCCGGGAT	5454	False	NA	NA	False	TTTAAA	-3	NA	126052968	126052770	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_126052800_126053000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120298	chr4	-	4289	11	FSM	ENSMUSG00000043962.17	ENSMUST00000080919.12	4378	11	93	-4	3	4	multi-exon	FALSE	canonical	3	431	junction_10	137.634443363571	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTTGTTGCTTGTGTG	6767	False	NA	1	True	AATAAA	-32	NA	126096460	126057870	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126096362
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120351	chr4	+	210	1	Intergenic	novelGene_3717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTGGAATTTGTGTTT	NA	False	NA	NA	False	AAGAAA	-11	NA	126116734	126116944	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_126116700_126116900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120360	chr4	-	3269	16	NIC	ENSMUSG00000028849.18	novel	3195	17	NA	NA	22	0	intron_retention	FALSE	canonical	3	46	junction_11	59.2617545770926	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	0	True	AATAAA	-21	NA	126150114	126125959	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126133824_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120362	chr4	-	3271	16	NIC	ENSMUSG00000028849.18	novel	3351	17	NA	NA	29	0	intron_retention	FALSE	canonical	3	98	junction_11	48.1315789153949	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	0	True	AATAAA	-21	NA	126150107	126125959	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120373	chr4	-	3363	17	NIC	ENSMUSG00000028849.18	novel	3351	17	NA	NA	-21	0	intron_retention	FALSE	canonical	3	52	junction_12	62.4189474438652	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	0	True	AATAAA	-21	NA	126150097	126125959	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126132314_126132426_126133824_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120375	chr4	-	3372	17	FSM	ENSMUSG00000028849.18	ENSMUST00000061143.15	3351	17	-21	0	-21	0	multi-exon	FALSE	canonical	3	86	junction_12	56.4079726191254	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	0	True	AATAAA	-21	NA	126150097	126125959	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126132314_126132426_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120379	chr4	-	3165	17	NIC	ENSMUSG00000028849.18	novel	3249	18	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_12	51.2541156884011	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	0	True	AATAAA	-21	NA	126150097	126125959	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120382	chr4	-	3266	18	NIC	ENSMUSG00000028849.18	novel	3249	18	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_13	63.2753635019	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	0	True	AATAAA	-21	NA	126150096	126125959	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126132314_126132426_126133824_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120386	chr4	-	3293	18	FSM	ENSMUSG00000028849.18	ENSMUST00000122129.8	3249	18	-44	0	22	0	multi-exon	FALSE	canonical	3	86	junction_13	57.8802606030247	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	0	True	AATAAA	-21	NA	126150114	126125959	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126132314_126132426_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120423	chr4	+	1286	5	FSM	ENSMUSG00000028847.9	ENSMUST00000030660.9	1336	5	50	0	-25	0	multi-exon	FALSE	canonical	3	345	junction_3	21.2882009573378	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCCTGTTTTCCTTCT	7675	False	NA	45	True	AATAAA	-25	NA	126156167	126169676	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_126156331_126166470_126166569_126166767_126166868_126167682_126167866_126168934
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120431	chr4	-	1670	6	FSM	ENSMUSG00000042558.17	ENSMUST00000102617.5	1672	6	2	0	2	0	multi-exon	FALSE	canonical	3	286	junction_3	41.9218320210365	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTCCTGTTCCTGTCTC	7078	False	NA	NA	False	AATAAA	-20	NA	126215494	126209839	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_126210659_126211095_126211197_126211512_126211698_126211776_126211985_126212191_126212289_126215234
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120452	chr4	+	184	1	Intergenic	novelGene_3718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATTTATATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	126440754	126440938	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_126440800_126440900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120465	chr4	+	5271	25	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-13	11	intron_retention	FALSE	canonical	1	26	junction_4	21.999842171151	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTAGTGGTCATTTCTTC	NA	False	NA	41	True	AATAAA	-34	NA	126450774	126487707	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120470	chr4	+	231	1	Intergenic	novelGene_3719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCACCTCTTTTTCTGAA	1138	False	NA	NA	False	NA	NA	NA	126567180	126567411	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_126567200_126567400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120478	chr4	+	859	6	FSM	ENSMUSG00000028837.9	ENSMUST00000030642.3	859	6	0	0	0	0	multi-exon	FALSE	canonical	3	3349	junction_3	129.102439945959	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGGGTTTGGCCTTA	5380	False	NA	19	True	AATAAA	-21	NA	126571422	126603507	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_126571639_126577914_126578038_126580821_126580893_126599850_126600014_126601346_126601397_126603271
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120496	chr4	-	3354	7	FSM	ENSMUSG00000028833.14	ENSMUST00000127079.2	2375	7	-3	-976	-3	-5	multi-exon	FALSE	canonical	3	56	junction_6	61.3969326052477	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTTTGTGGTCTGCCT	NA	False	NA	-6	True	NA	NA	NA	126647234	126637547	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_126639065_126640338_126640482_126640888_126641114_126642270_126642513_126643677_126644647_126645733_126645875_126647117
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120521	chr4	+	4363	21	FSM	ENSMUSG00000028830.15	ENSMUST00000047431.11	4384	21	27	-6	3	6	multi-exon	FALSE	canonical	2	36	junction_1	9.66643677887566	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGAGGTTGTGCTATTT	NA	False	NA	24	True	ATTAAA	-24	NA	126647589	126748135	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_126647789_126650691_126650862_126685567_126686089_126708048_126708296_126710165_126710268_126717436_126717535_126722593_126722682_126724122_126724216_126725882_126726016_126729263_126729493_126730427_126730552_126731079_126731213_126733391_126733541_126734438_126734591_126734898_126735038_126736268_126736429_126740150_126740294_126740933_126741057_126741569_126741661_126742603_126742696_126746958
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120529	chr4	+	195	1	Intergenic	novelGene_3720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAATGAGAAAAAT	855	False	NA	NA	False	NA	NA	NA	126678554	126678749	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_126678600_126678700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120536	chr4	-	7194	30	FSM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	-92	0	-92	0	multi-exon	FALSE	canonical	3	101	junction_15	43.6375461501576	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGAGTTCTTTTTCTTT	NA	False	NA	-10	True	AATAAA	-20	NA	126862020	126755731	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120540	chr4	-	7192	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-93	0	at_least_one_novel_splicesite	FALSE	canonical	3	165	junction_15	36.0808643919119	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGAGTTCTTTTTCTTT	NA	False	NA	-10	True	AATAAA	-20	NA	126862021	126755731	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120553	chr4	+	205	1	Intergenic	novelGene_3721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATACAGTATGACTAGC	NA	False	NA	NA	False	NA	NA	NA	126793007	126793212	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_126793000_126793200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120560	chr4	+	189	1	Intergenic	novelGene_3722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGTATCATCAACTATG	4186	False	NA	NA	False	NA	NA	NA	126812772	126812961	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_126812800_126813000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120566	chr4	+	253	1	Intergenic	novelGene_3723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCCCAAAATGGGAATATT	NA	False	NA	NA	False	NA	NA	NA	126877835	126878088	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_126877800_126878100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120573	chr4	+	203	1	Intergenic	novelGene_3724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGTTTGACTTGAGCCT	NA	False	NA	NA	False	AATACA	-6	NA	126882849	126883052	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_126882800_126883100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120592	chr4	+	2273	12	NIC	ENSMUSG00000028820.14	novel	925	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_9	288.88503246702	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTTGTTCAAGTAGGA	NA	False	NA	18	True	AATAAA	-19	NA	126915114	126930806	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126929600_126929648_126930355_126930443_126930724
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120607	chr4	-	3369	8	FSM	ENSMUSG00000043872.15	ENSMUST00000106102.9	3852	8	-6	489	-6	10	multi-exon	FALSE	canonical	3	376	junction_6	26.8206438918888	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTTTTGTTTGTTGGAG	NA	False	NA	NA	False	ATTAAA	-30	NA	126954951	126941375	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120630	chr4	+	178	1	Intergenic	novelGene_3725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAGCCATTCTGACTGTT	NA	False	NA	NA	False	NA	NA	NA	126959860	126960038	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_126959900_126960000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120644	chr4	+	192	1	Intergenic	novelGene_3726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTTGGTTTTCAAGCTG	NA	False	NA	NA	False	NA	NA	NA	126983765	126983957	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_126983800_126984000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120656	chr4	+	245	1	Intergenic	novelGene_3727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	723	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGGTATGGGATAGGGA	NA	False	NA	NA	False	NA	NA	NA	126993287	126993532	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_126993300_126993500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120661	chr4	-	243	2	Intergenic	novelGene_3728	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTTTTTTTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	127010459	126993289	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_126993510_127010436
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120681	chr4	+	176	1	Intergenic	novelGene_3729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAGAAGTCTAAAA	424	False	NA	NA	False	NA	NA	NA	127030596	127030772	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_127030600_127030800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120687	chr4	+	243	1	Intergenic	novelGene_3730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTTCCTCTTCTGAGAA	5906	False	NA	NA	False	NA	NA	NA	127041579	127041822	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_127041600_127041800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120706	chr4	-	180	1	Intergenic	novelGene_3731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAGAAGATAGACAACG	8792	False	NA	NA	False	NA	NA	NA	127132705	127132525	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_127132500_127132700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120721	chr4	-	1688	2	FSM	ENSMUSG00000042367.13	ENSMUST00000106091.9	1623	2	-61	-4	-61	4	multi-exon	FALSE	canonical	3	984	junction_1	0	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTCCCTCCATTCTCCT	NA	False	NA	-1	True	AATAAA	-21	NA	127223015	127219023	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_127220565_127222868
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120732	chr4	-	1885	2	FSM	ENSMUSG00000042367.13	ENSMUST00000046532.4	1880	2	-3	-2	-3	2	multi-exon	FALSE	canonical	3	980	junction_1	0	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTTCTTCCCTCCATTCTC	NA	False	NA	-3	True	AATAAA	-19	NA	127224640	127219025	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_127220565_127224294
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120741	chr4	-	1805	2	NNC	ENSMUSG00000042367.13	novel	1623	2	NA	NA	632	0	at_least_one_novel_splicesite	FALSE	canonical	3	106	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGGTTCTTCCCTCCATTC	NA	False	NA	-5	True	AATAAA	-17	NA	127224005	127219027	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_-_127220565_127223737
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120751	chr4	-	1539	1	NIC	ENSMUSG00000042367.13	novel	1623	2	NA	NA	2388	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGGTTCTTCCCTCCATTC	NA	False	NA	-5	True	AATAAA	-17	NA	127220566	127219027	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_127219000_127220600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120753	chr4	-	1897	2	NNC	ENSMUSG00000042367.13	novel	1880	2	NA	NA	224	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGGTTCTTCCCTCCATTC	NA	False	NA	-5	True	AATAAA	-17	NA	127224413	127219027	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_-_127220806_127224294
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120766	chr4	-	2749	2	FSM	ENSMUSG00000046623.9	ENSMUST00000060419.2	1445	2	0	-1304	0	1304	multi-exon	FALSE	canonical	3	55	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGTGAGCCTCGTGGA	4504	False	NA	NA	False	NA	NA	NA	127247874	127243574	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_127246275_127247825
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120776	chr4	-	1360	2	FSM	ENSMUSG00000042357.3	ENSMUST00000046498.3	1721	2	-23	384	-23	-384	multi-exon	FALSE	canonical	3	573	junction_1	0	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTCCTTTGGGTCTTGGC	381	False	NA	-4	True	AATAAA	-24	NA	127251997	127248985	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_127250167_127251818
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120787	chr4	+	206	1	Intergenic	novelGene_3732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGACTAAGACTATCTAT	NA	False	NA	NA	False	TTTAAA	-7	NA	127343300	127343506	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_127343300_127343500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120799	chr4	+	195	1	Intergenic	novelGene_3733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	302	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAACCAAAGTAGGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	128006103	128006298	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_128006100_128006300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120807	chr4	+	189	1	Intergenic	novelGene_3734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTCAGCTCCTCCAGC	NA	False	NA	NA	False	NA	NA	NA	128505767	128505956	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_128505800_128506000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120820	chr4	+	2549	7	FSM	ENSMUSG00000028796.18	ENSMUST00000106079.10	2535	7	-14	0	-10	0	multi-exon	FALSE	canonical	3	155	junction_1	20.8865985742054	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTTTCTCCCAGTGAT	NA	False	NA	20	True	AATAAA	-21	NA	128621363	128646674	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_128621664_128637146_128637350_128638794_128638925_128639582_128639698_128640893_128641036_128641800_128642078_128645292
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120843	chr4	+	1791	7	FSM	ENSMUSG00000028792.15	ENSMUST00000102604.11	1781	7	-10	0	-10	0	multi-exon	FALSE	canonical	3	1917	junction_3	122.234746833023	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTTGTGGAGTTTTTT	2859	False	NA	29	True	AATAAA	-19	NA	128887006	128905322	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_128887230_128892926_128893053_128895943_128896055_128896166_128896262_128901505_128901579_128901826_128902023_128904355
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120855	chr4	+	1765	8	NIC	ENSMUSG00000028792.15	novel	1781	7	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_3	920.647265653411	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTTGTGGAGTTTTTT	2949	False	NA	29	True	AATAAA	-19	NA	128887096	128905322	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_128887230_128892926_128893053_128895288_128895353_128895943_128896055_128896166_128896262_128901505_128901579_128901826_128902023_128904355
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120865	chr4	-	229	1	Intergenic	novelGene_3735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTATCATCTTGCATGATA	4206	False	NA	NA	False	NA	NA	NA	128931703	128931474	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_128931500_128931700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120872	chr4	+	2720	9	FSM	ENSMUSG00000028793.16	ENSMUST00000168461.8	2532	9	-188	0	-188	0	multi-exon	FALSE	canonical	3	132	junction_2	17.2005632175228	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCATGTCACTGTCCTTGG	NA	False	NA	16	True	AATAAA	-19	NA	128951875	128978319	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_128952690_128965529_128965736_128967294_128967437_128969362_128969526_128969954_128970070_128972699_128972841_128974134_128974343_128976539_128976672_128977520
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120885	chr4	-	220	1	Intergenic	novelGene_3736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAACACAGCAAAGCCATGC	NA	False	NA	NA	False	AATAAA	-26	NA	128964218	128963998	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_128964000_128964200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120894	chr4	+	205	1	Intergenic	novelGene_3737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGGAGGACAGTCCTTTA	3369	False	NA	NA	False	NA	NA	NA	128996682	128996887	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_128996700_128996900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120899	chr4	+	207	1	Intergenic	novelGene_3738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACACCCACCAGGGGCTGG	5254	False	NA	NA	False	NA	NA	NA	129040915	129041122	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_129040900_129041100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120906	chr4	+	196	2	Intergenic	novelGene_3739	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	134	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACACCCACCAATTTCAAA	5256	False	NA	NA	False	NA	NA	NA	129040917	129041346	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_129041063_129041295
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120933	chr4	-	3983	9	FSM	ENSMUSG00000040928.16	ENSMUST00000106059.8	4084	9	104	-3	3	3	multi-exon	FALSE	canonical	3	25	junction_6	66.0793793478722	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTACTGTGGCCGTCTGT	1107	False	NA	-2	True	AATAAA	-18	NA	129083416	129041794	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129075894_129076124_129076326_129077393_129077511_129083334
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120949	chr4	+	347	1	Intergenic	novelGene_3740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATCTGACTCCCTCTTCT	699	False	NA	NA	False	NA	NA	NA	129072862	129073209	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_129072900_129073200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120980	chr4	-	5082	7	FSM	ENSMUSG00000050390.13	ENSMUST00000097873.10	5033	7	-49	0	-49	0	multi-exon	FALSE	canonical	3	123	junction_6	50.045534821356	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGCTGTTTTCCA	NA	False	NA	0	True	ATTAAA	-28	NA	129133016	129113370	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129132798
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120982	chr4	-	5238	7	FSM	ENSMUSG00000050390.13	ENSMUST00000052602.6	5187	7	-51	0	-51	0	multi-exon	FALSE	canonical	3	145	junction_6	42.0713679359253	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGCTGTTTTCCA	NA	False	NA	0	True	ATTAAA	-28	NA	129142287	129113370	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129141913
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000120996	chr4	+	190	1	Intergenic	novelGene_3741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAATACTTGGAAGGCAGA	NA	False	NA	NA	False	NA	NA	NA	129156425	129156615	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_129156400_129156600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121000	chr4	-	181	1	Intergenic	novelGene_3742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGCAGCACAGAGACA	NA	False	NA	NA	False	NA	NA	NA	129194191	129194010	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_129194000_129194200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121017	chr4	-	1987	12	FSM	ENSMUSG00000057236.11	ENSMUST00000102598.4	4407	12	11	2409	11	8	multi-exon	TRUE	canonical	3	482	junction_1	226.647613038099	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGTGGGTTTTATTTAG	2503	False	NA	-21	True	AATAAA	-22	NA	129229152	129203301	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121025	chr4	-	1693	12	NIC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	21	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	305.162062349697	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCTGGTGGGTTTTATT	2513	False	NA	-24	True	AATAAA	-19	NA	129229142	129203304	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_129203670_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121037	chr4	+	209	1	Intergenic	novelGene_3743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAGACAATTAATTGAGT	617	False	NA	NA	False	NA	NA	NA	129213357	129213566	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_129213400_129213600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121039	chr4	+	216	1	Intergenic	novelGene_3744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTGGAGCTCACCAATTA	NA	False	NA	NA	False	AAAAAG	-19	NA	129222770	129222986	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_129222800_129223000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121044	chr4	+	1135	7	FSM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	-87	2785	-87	53	multi-exon	FALSE	canonical	3	561	junction_4	57.3866031598162	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGTACTTGGTCATTTG	NA	False	NA	70	True	AATGAA	-22	NA	129229400	129240879	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121058	chr4	-	2206	5	FSM	ENSMUSG00000028807.3	ENSMUST00000030610.3	2321	5	115	0	115	0	multi-exon	FALSE	canonical	3	128	junction_4	9.35414346693485	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTCGTGACACTTTTA	NA	False	NA	0	True	AATAAA	-24	NA	129271794	129247420	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_129248298_129251497_129251668_129253690_129254494_129263021_129263116_129271532
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121063	chr4	+	199	1	Intergenic	novelGene_3745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGAACTCAGGGCCTCTG	4867	False	NA	NA	False	NA	NA	NA	129260484	129260683	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_129260500_129260700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121082	chr4	+	213	1	Intergenic	novelGene_3746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTGTTTAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	129281433	129281646	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_129281400_129281600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121085	chr4	+	197	1	Intergenic	novelGene_3747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTCCCCCGGTGGTGA	1720	False	NA	NA	False	NA	NA	NA	129314296	129314493	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_129314300_129314500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121093	chr4	-	180	1	Intergenic	novelGene_3748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	129344522	129344342	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_129344300_129344500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121102	chr4	+	180	1	Intergenic	novelGene_3749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTATTTTATTTTTAAACA	9738	False	NA	12	True	NA	NA	NA	129345766	129345946	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_129345800_129345900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121110	chr4	-	180	1	Intergenic	novelGene_3750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAACAAGGCCGGGCGTGG	NA	False	NA	NA	False	NA	NA	NA	129352718	129352538	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_129352500_129352700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121114	chr4	+	2736	11	FSM	ENSMUSG00000040859.15	ENSMUST00000048162.10	2823	11	87	0	-4	0	multi-exon	FALSE	canonical	3	95	junction_3	13.6088206689632	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGAAGTGTCCGGGGATGT	NA	False	NA	64	True	ATTAAA	-15	NA	129355460	129382291	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_129355499_129355734_129355796_129359022_129359140_129360615_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121125	chr4	+	1593	2	FSM	ENSMUSG00000047945.7	ENSMUST00000062356.7	1605	2	13	-1	13	1	multi-exon	FALSE	canonical	3	8029	junction_1	0	1615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTGGTCTTCTGGGGTG	NA	False	NA	25	True	AATAAA	-25	NA	129407386	129409779	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_129407710_129408509
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121134	chr4	+	2344	1	NIC	ENSMUSG00000047945.7	novel	1605	2	NA	NA	51	-10	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTTTCATTGAGTGGT	NA	False	NA	14	True	AATAAA	-14	NA	129407424	129409768	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_129407400_129409800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121137	chr4	-	2054	14	FSM	ENSMUSG00000028800.16	ENSMUST00000102597.5	2038	14	-13	-3	-13	3	multi-exon	FALSE	canonical	3	1463	junction_10	202.513203601978	1519	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTGGTTTAAGTTCTT	8795	False	NA	-2	True	AATAAA	-25	NA	129436519	129409893	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_129410430_129410692_129410742_129411148_129411302_129411585_129411717_129411805_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416298_129416755_129416895_129418038_129418114_129422719_129422838_129428406_129428520_129436373
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121153	chr4	-	1601	7	ISM	ENSMUSG00000000409.15	ENSMUST00000167288.8	2074	13	1832	5	-81	0	3prime_fragment	FALSE	canonical	3	108	junction_2	13.2214052035158	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTCTACTGCATACTT	NA	False	NA	0	True	NA	NA	NA	129450333	129442141	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_-_129442794_129445297_129445430_129445509_129445664_129445740_129445818_129449331_129449512_129449645_129449799_129450080
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121162	chr4	+	193	1	Intergenic	novelGene_3751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATCTTGAAGGTTTCCC	434	False	NA	NA	False	NA	NA	NA	129474510	129474703	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_129474500_129474700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121177	chr4	-	1152	10	ISM	ENSMUSG00000028798.17	ENSMUST00000102593.11	1123	11	49	14	0	-14	intron_retention	FALSE	canonical	3	1341	junction_3	45.5241083871441	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTTGTCAGGCATTTTG	6426	False	NA	-14	True	AATAAA	-18	NA	129494392	129485766	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129488980_129489056_129489207_129490666_129490733_129492747_129492836_129494201
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121180	chr4	-	1109	11	FSM	ENSMUSG00000028798.17	ENSMUST00000102593.11	1123	11	0	14	0	-14	multi-exon	FALSE	canonical	3	822	junction_10	179.667915889287	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTTGTCAGGCATTTTG	6377	False	NA	-14	True	AATAAA	-18	NA	129494441	129485766	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129488980_129489056_129489207_129490666_129490733_129492747_129492836_129494201_129494295_129494386
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121192	chr4	+	1563	5	FSM	ENSMUSG00000028797.21	ENSMUST00000152126.8	1519	5	-32	-12	0	5	multi-exon	FALSE	canonical	3	284	junction_2	194.785779768442	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGTTTTATTTGTGTT	3164	False	NA	21	True	AATAAA	-21	NA	129494460	129502326	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_129494525_129494775_129495037_129495987_129496055_129500879_129500973_129501248
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121220	chr4	+	1421	5	FSM	ENSMUSG00000028797.21	ENSMUST00000102591.10	1437	5	21	-5	0	5	multi-exon	FALSE	canonical	3	325	junction_2	181.287582310538	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGTTTTATTTGTGTT	3197	False	NA	21	True	AATAAA	-21	NA	129494493	129502326	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_129494525_129494775_129494928_129495987_129496055_129500879_129500973_129501248
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121221	chr4	+	1635	6	NIC	ENSMUSG00000028797.21	novel	1437	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_2	295.098220936691	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGCAAATGTTTTATTT	3197	False	NA	16	True	AATAAA	-16	NA	129494493	129502321	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_129494525_129494775_129494928_129495199_129495419_129495987_129496055_129500879_129500973_129501248
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121238	chr4	-	829	6	FSM	ENSMUSG00000028795.16	ENSMUST00000030586.15	879	6	51	-1	3	1	multi-exon	FALSE	canonical	3	76	junction_3	6.82934843158555	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCGGTGCTCTCCTTGTT	NA	False	NA	-1	True	ATTAAA	-17	NA	129517689	129513065	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_129513240_129514249_129514273_129514475_129514670_129514776_129514944_129516392_129516581_129517606
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121246	chr4	-	4580	11	FSM	ENSMUSG00000053841.16	ENSMUST00000046425.16	4569	11	-10	-1	-10	1	multi-exon	FALSE	canonical	3	279	junction_10	28.2349074728429	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGCCAATCGAATTATT	7850	False	NA	-4	True	ATTAAA	-23	NA	129534868	129519869	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534221_129534763
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121263	chr4	-	5710	14	FSM	ENSMUSG00000003731.14	ENSMUST00000102590.11	5710	14	0	0	0	0	multi-exon	TRUE	canonical	3	106	junction_4	15.2943505832485	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTTCTTTGGTTTGGAG	8834	False	NA	3	True	AATAAA	-22	NA	129566560	129537772	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_129541973_129542990_129543170_129544476_129544605_129545380_129545507_129547230_129547310_129547634_129547799_129548080_129548181_129548657_129548747_129549222_129549355_129550100_129550196_129551181_129551282_129551560_129551654_129555098_129555233_129566469
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121275	chr4	+	188	1	Intergenic	novelGene_3752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGGGCTAGAGATGTG	3160	False	NA	NA	False	NA	NA	NA	129578803	129578991	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_129578800_129579000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121280	chr4	-	2731	9	FSM	ENSMUSG00000028790.14	ENSMUST00000066257.6	3738	9	-25	1032	-18	-1032	multi-exon	FALSE	canonical	3	582	junction_8	66.0235516690825	304	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATGAATTGTCATTTTT	4956	False	NA	NA	False	AATAAA	-28	NA	129636114	129608643	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_129609980_129612875_129612935_129613831_129613900_129614444_129614647_129616437_129616572_129619368_129619516_129621347_129621465_129623993_129624119_129635571
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121290	chr4	+	208	1	Intergenic	novelGene_3753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGAGGCTGAGATGTCAA	NA	False	NA	NA	False	NA	NA	NA	129638012	129638220	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_129638000_129638200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121299	chr4	+	3682	6	FSM	ENSMUSG00000028788.15	ENSMUST00000030578.14	3646	6	-35	-1	-35	1	multi-exon	FALSE	canonical	3	460	junction_1	910.936792538319	281	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGAATTTCTTCCCCA	NA	False	NA	16	True	AATAAA	-17	NA	129713978	129743772	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121324	chr4	+	197	1	Intergenic	novelGene_3754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	6448	False	NA	NA	False	NA	NA	NA	129779003	129779200	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_129779000_129779200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121326	chr4	-	179	1	Intergenic	novelGene_3755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTTAAAAAAAGGAGGAGGA	6333	False	NA	1	True	NA	NA	NA	129817004	129816825	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_129816800_129817000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121338	chr4	+	1509	5	FSM	ENSMUSG00000028779.17	ENSMUST00000030563.6	1551	5	46	-4	46	3	multi-exon	FALSE	canonical	3	185	junction_1	25.1047804212664	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGACTGTGTGTCCGT	9324	False	NA	29	True	AATAAA	-36	NA	130001394	130021931	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_130001444_130014960_130015235_130018855_130019012_130019446_130019591_130021045
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121343	chr4	-	1955	12	FSM	ENSMUSG00000028776.15	ENSMUST00000105999.9	1952	12	0	-3	0	3	multi-exon	FALSE	canonical	3	185	junction_11	29.3189922368611	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGGGAGTCTTCAAGG	NA	False	NA	NA	False	AATAAA	-22	NA	130068595	130059391	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062811_130062927_130063103_130063197_130066724_130066789_130067685_130068001_130068515
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121368	chr4	+	837	5	NNC	ENSMUSG00000028773.9	novel	823	4	NA	NA	143	-4	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	2159.9895109699	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTTGTCTGTCTTTGGT	NA	False	NA	27	True	AATAAA	-16	NA	130202530	130209252	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_130202644_130203234_130203396_130206083_130206257_130207746_130207849_130208964
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121372	chr4	+	4116	3	NIC	ENSMUSG00000028773.9	novel	823	4	NA	NA	143	-4	intron_retention	FALSE	canonical	3	4337	junction_2	109.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTTGTCTGTCTTTGGT	NA	False	NA	27	True	AATAAA	-16	NA	130202530	130209252	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_130206257_130207746_130207849_130208964
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121392	chr4	+	199	1	Intergenic	novelGene_3756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGCCAAAGGAGGCAGAG	NA	False	NA	NA	False	NA	NA	NA	130235070	130235269	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_130235100_130235300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121400	chr4	+	1574	10	FSM	ENSMUSG00000074088.7	ENSMUST00000105994.4	1584	10	18	-8	18	8	multi-exon	FALSE	canonical	3	1067	junction_7	51.5407066738946	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGACTTGGATTTATTG	NA	False	NA	30	True	ATTAAA	-31	NA	130253942	130283827	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_130254143_130256420_130256551_130258867_130258962_130261981_130262148_130271838_130271962_130277186_130277308_130278274_130278358_130279746_130279809_130282367_130282472_130283336
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121407	chr4	+	217	1	Intergenic	novelGene_3757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	375	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATAGCTCTTTACGTTTT	NA	False	NA	NA	False	NA	NA	NA	130259268	130259485	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_130259300_130259500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121415	chr4	+	2728	7	FSM	ENSMUSG00000078532.10	ENSMUST00000105993.4	1202	7	-39	-1487	-39	1471	multi-exon	FALSE	canonical	3	69	junction_2	13.2748718344933	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTCTTGCCCTCTTGG	NA	False	NA	19	True	ATTAAA	-25	NA	130297157	130341115	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_130297542_130332055_130332194_130333903_130333985_130337200_130337399_130338581_130338643_130339094_130339177_130339331
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121431	chr4	-	244	1	Intergenic	novelGene_3758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTATAGTTGGGTTTTC	NA	False	NA	NA	False	NA	NA	NA	130364766	130364522	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_130364500_130364800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121438	chr4	-	367	1	Intergenic	novelGene_3759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAGTTAACAATTACCAG	NA	False	NA	NA	False	NA	NA	NA	130369677	130369310	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_130369300_130369700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121444	chr4	+	5348	22	FSM	ENSMUSG00000028580.16	ENSMUST00000097862.3	3991	22	-47	-1310	0	0	multi-exon	TRUE	canonical	3	304	junction_17	105.62885866236	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390669	130508875	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121451	chr4	+	5343	22	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	218	junction_8	114.255134797804	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390671	130508875	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121458	chr4	+	5261	22	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	157.712359086461	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390676	130508871	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_130390706_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121463	chr4	+	5344	22	FSM	ENSMUSG00000028580.16	ENSMUST00000030315.13	5389	22	45	0	0	0	multi-exon	FALSE	canonical	3	218	junction_8	122.217214904643	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390676	130508875	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121469	chr4	+	5047	20	NIC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_3	146.707861670397	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390676	130508875	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121473	chr4	+	5335	22	FSM	ENSMUSG00000028580.16	ENSMUST00000097864.9	4017	22	-20	-1298	0	0	multi-exon	FALSE	canonical	3	368	junction_8	95.9617506945964	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390676	130508875	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121488	chr4	+	5333	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	132	junction_3	144.41451111439	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390678	130508875	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445467_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121490	chr4	+	5051	20	FSM	ENSMUSG00000028580.16	ENSMUST00000105992.9	5058	20	9	-2	1	0	multi-exon	FALSE	canonical	3	63	junction_3	153.52394310997	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390678	130508875	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121499	chr4	+	5246	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	176	junction_2	145.296412960016	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390679	130508875	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121500	chr4	+	5338	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	132	junction_3	150.339585371602	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390679	130508875	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445467_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121503	chr4	+	5237	22	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	176	junction_2	126.002609482391	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390679	130508875	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121505	chr4	+	5335	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	132	junction_3	137.961166444446	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390679	130508875	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445467_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121539	chr4	-	225	1	Intergenic	novelGene_3760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTACTCCTAGGTGTAGA	NA	False	NA	NA	False	NA	NA	NA	130410802	130410577	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_130410600_130410800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121552	chr4	+	2545	9	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	-241	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	154.279778324964	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTCATGTGGTTCTT	NA	False	NA	21	True	AATAAA	-17	NA	130640194	130663451	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_130640218_130640512_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121563	chr4	+	2596	8	FSM	ENSMUSG00000028581.18	ENSMUST00000151698.8	2600	8	3	1	3	-1	multi-exon	FALSE	canonical	3	425	junction_4	26.2071808199702	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTCATGTGGTTCTT	NA	False	NA	21	True	AATAAA	-17	NA	130640438	130663451	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121569	chr4	+	2418	9	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	-40	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	159.179487921654	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTCATGTGGTTCT	NA	False	NA	20	True	AATAAA	-16	NA	130640578	130663450	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771_130662433_130662469
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121578	chr4	+	1342	10	FSM	ENSMUSG00000028910.13	ENSMUST00000030742.11	1337	10	-3	-2	-3	2	multi-exon	FALSE	canonical	3	105	junction_6	17.6243378301319	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGCGTGTGGAGGAATG	NA	False	NA	35	True	AATAAA	-35	NA	131570777	131595099	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_131570990_131581026_131581125_131581895_131582028_131585067_131585212_131588071_131588175_131589086_131589190_131590228_131590303_131592367_131592429_131592566_131592640_131594757
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121592	chr4	+	2331	6	FSM	ENSMUSG00000028911.17	ENSMUST00000053819.6	2257	6	-69	-5	-69	5	multi-exon	FALSE	canonical	3	354	junction_1	33.990586932267	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGCGCTTGAATCTAAATGG	NA	False	NA	27	True	AATAAA	-27	NA	131600858	131629022	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_131601182_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121609	chr4	-	5066	18	FSM	ENSMUSG00000028906.18	ENSMUST00000146021.8	5074	18	8	0	8	0	multi-exon	FALSE	canonical	3	68	junction_5	24.1593613426437	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	5317	False	NA	NA	False	AATAAA	-21	NA	131802624	131650723	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121630	chr4	-	5516	19	NIC	ENSMUSG00000028906.18	novel	5074	18	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_5	31.5264439267525	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	5317	False	NA	NA	False	AATAAA	-21	NA	131802624	131650723	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131664325_131664776_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121646	chr4	+	190	1	Intergenic	novelGene_3761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGATAATAGATTACATAA	NA	False	NA	NA	False	NA	NA	NA	131888784	131888974	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_131888800_131889000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121653	chr4	-	5252	5	FSM	ENSMUSG00000040025.18	ENSMUST00000152796.8	4129	5	38	-1161	38	1161	multi-exon	FALSE	canonical	3	863	junction_4	54.1589097009901	495	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGCCTGTTGTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	131939576	131911061	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_131914259_131931442_131933027_131938062_131938143_131938742_131938768_131939210
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121673	chr4	-	163	1	Intergenic	novelGene_3762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACACACCCTCTCTATGT	NA	False	NA	NA	False	NA	NA	NA	131992522	131992359	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_131992400_131992500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121678	chr4	+	1355	6	FSM	ENSMUSG00000028899.12	ENSMUST00000030731.11	3787	6	-5	2437	-5	617	multi-exon	FALSE	canonical	3	439	junction_3	32.7987804651331	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGTGTCCATAGGACCT	NA	False	NA	26	True	AATAAA	-22	NA	132001680	132020640	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_132001799_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121690	chr4	+	335	1	Intergenic	novelGene_3763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTAGATTCAGCTTTAG	NA	False	NA	NA	False	NA	NA	NA	132031017	132031352	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_132031000_132031400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121699	chr4	+	610	5	FSM	ENSMUSG00000086290.10	ENSMUST00000153474.9	606	5	-2	-2	0	2	multi-exon	FALSE	canonical	3	139	junction_1	27.427176303805	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTTTATTTATTTATT	NA	False	NA	29	True	AATAAA	-18	NA	132035986	132038337	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_132036219_132037148_132037215_132037461_132037527_132037761_132037816_132038144
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121715	chr4	-	2263	10	FSM	ENSMUSG00000028896.14	ENSMUST00000084250.11	2285	10	23	-1	-19	1	multi-exon	FALSE	canonical	3	372	junction_9	35.0019399815087	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTTATGCGTGTCCA	5462	False	NA	-9	True	AATAAA	-22	NA	132073035	132059228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132067235_132067318_132072956
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121737	chr4	-	2497	13	NIC	ENSMUSG00000028896.14	novel	2326	11	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_10	276.521347377658	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTTGTTTTTATGCGT	NA	False	NA	-14	True	AATAAA	-17	NA	132080946	132059233	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132067235_132067318_132075310_132075432_132079432_132079555_132079973_132080010_132080907
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121743	chr4	-	396	3	FSM	ENSMUSG00000085241.8	ENSMUST00000152943.8	437	3	51	-10	-2	10	multi-exon	FALSE	canonical	3	959	junction_1	21	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATGTGTGTGTGTGAGC	NA	False	NA	1	True	ATTAAA	-25	NA	132080946	132079233	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_132079555_132079973_132080010_132080907
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121762	chr4	-	804	2	ISM	ENSMUSG00000028896.14	ENSMUST00000155129.2	507	6	-30	14111	-30	-12443	5prime_fragment	FALSE	canonical	3	1001	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGTGATTTAATGTG	NA	False	NA	-10	True	ATTAAA	-14	NA	132080946	132079244	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_-_132080010_132080907
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121801	chr4	+	187	1	Intergenic	novelGene_3764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGACACGTATTCCACATC	NA	False	NA	NA	False	NA	NA	NA	132212860	132213047	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_132212900_132213000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121809	chr4	-	3493	10	FSM	ENSMUSG00000028893.9	ENSMUST00000030724.9	3475	10	-7	-11	-7	11	multi-exon	TRUE	canonical	3	666	junction_4	59.9637750728526	1037	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATGTTTGTCCATTTCC	NA	False	NA	-20	True	AATAAA	-33	NA	132237819	132219331	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_132221114_132221774_132221920_132224195_132224387_132224682_132224802_132225263_132225415_132226247_132226461_132226555_132226739_132227076_132227275_132229873_132229940_132237374
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121832	chr4	+	212	1	Intergenic	novelGene_3765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTACCATAACTGCTCA	NA	False	NA	NA	False	NA	NA	NA	132254928	132255140	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_132254900_132255100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121847	chr4	-	2933	2	FSM	ENSMUSG00000054428.13	ENSMUST00000145795.2	1014	2	10	-1929	10	-4	multi-exon	FALSE	canonical	3	7869	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTGATGCCTTCTACT	9315	False	NA	-24	True	AATAAA	-15	NA	132260896	132257869	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_132260699_132260792
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121853	chr4	-	156	1	Intergenic	novelGene_3766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAGAAACGGGTA	2286	False	NA	NA	False	NA	NA	NA	132259323	132259167	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_132259200_132259300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121857	chr4	+	1404	9	FSM	ENSMUSG00000054405.15	ENSMUST00000094657.10	1401	9	-2	-1	-2	1	multi-exon	TRUE	canonical	3	2684	junction_8	233.065676097962	644	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTCTCCTCCTCGGGTG	2329	False	NA	20	True	AATAAA	-20	NA	132262858	132281054	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_132262975_132265497_132265600_132269092_132269150_132271366_132271434_132271967_132272063_132273947_132274020_132277687_132277780_132278845_132278922_132280327
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121873	chr4	-	186	1	Intergenic	novelGene_3767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTATTGCTATTATTTCA	NA	False	NA	NA	False	NA	NA	NA	132334938	132334752	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_132334800_132334900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121886	chr4	+	192	1	Intergenic	novelGene_3768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTTCTATGATTTAAAA	2392	False	NA	NA	False	NA	NA	NA	132354164	132354356	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_132354200_132354400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121894	chr4	+	183	1	Intergenic	novelGene_3769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTTTGGAAAAAAAAA	7258	False	NA	NA	False	NA	NA	NA	132359030	132359213	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_132359000_132359200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121910	chr4	+	221	1	Intergenic	novelGene_3770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATACACTAGCATTACCTG	NA	False	NA	NA	False	NA	NA	NA	132443294	132443515	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_132443300_132443500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121917	chr4	-	1819	3	FSM	ENSMUSG00000037752.5	ENSMUST00000045550.5	4245	3	26	2400	8	1209	multi-exon	FALSE	canonical	3	48	junction_1	6.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTACCACTAAGTGTAG	4070	False	NA	-6	True	ATTAAA	-24	NA	132459831	132454607	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_132455882_132458186_132458384_132459483
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121939	chr4	+	1568	9	FSM	ENSMUSG00000028884.15	ENSMUST00000102561.11	1813	9	-12	257	-9	-257	multi-exon	FALSE	canonical	3	1317	junction_7	93.1791788706039	244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTTTTATTTTTAGCG	NA	False	NA	38	True	GATAAA	-28	NA	132495633	132505806	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_132495778_132495990_132496098_132497856_132497959_132499151_132499266_132501137_132501213_132502327_132502445_132503558_132503667_132503963_132504059_132505100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121954	chr4	+	198	1	Intergenic	novelGene_3771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGAAAGTAGGGCCAGG	93	False	NA	NA	False	NA	NA	NA	132530839	132531037	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_132530800_132531000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121960	chr4	-	2023	7	FSM	ENSMUSG00000028882.14	ENSMUST00000030702.14	2037	7	19	-5	-16	5	multi-exon	FALSE	canonical	3	165	junction_6	9.9121138007995	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTCTTGAGTCTTACTG	NA	False	NA	-1	True	ATTAAA	-21	NA	132570461	132554234	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_132555518_132556683_132556749_132557935_132558081_132560207_132560429_132561947_132562102_132567954_132568016_132570367
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121983	chr4	+	242	1	Intergenic	novelGene_3772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGGTAATTCTGTGTA	6986	False	NA	NA	False	AATAAA	-22	NA	132588483	132588725	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_132588500_132588700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000121997	chr4	+	272	1	Intergenic	novelGene_3773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTAAATTTTGGGGTCA	1629	False	NA	NA	False	NA	NA	NA	132625955	132626227	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_132626000_132626200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122018	chr4	+	2409	1	Antisense	novelGene_ENSMUSG00000028878.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGGTTTCTCTGTATAT	5577	False	NA	NA	False	NA	NA	NA	132644650	132647059	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr4_+_132644600_132647100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122025	chr4	+	194	1	Intergenic	novelGene_3774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCACCTGGGCTTGTAG	NA	False	NA	NA	False	NA	NA	NA	132654045	132654239	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_132654000_132654200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122039	chr4	+	195	1	Intergenic	novelGene_3775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACAGTAATGATGTGCAC	1750	False	NA	NA	False	NA	NA	NA	132733584	132733779	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_132733600_132733800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122052	chr4	+	188	1	Intergenic	novelGene_3776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACATCCACATCGGACCT	NA	False	NA	NA	False	NA	NA	NA	132851204	132851392	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_132851200_132851400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122061	chr4	+	5607	9	FSM	ENSMUSG00000028868.14	ENSMUST00000084241.12	5642	9	35	0	0	0	multi-exon	FALSE	canonical	3	420	junction_8	37.0776212829248	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGGTGTCTGTGTGTGT	NA	False	NA	44	True	GATAAA	-22	NA	132857850	132927067	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_132858040_132903751_132903924_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706_132922219_132923027
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122081	chr4	-	1385	5	FSM	ENSMUSG00000028857.17	ENSMUST00000139030.2	546	5	-8	-831	-8	0	multi-exon	FALSE	canonical	3	79	junction_4	309.884151740614	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTCTGTCATTTTCTT	NA	False	NA	-12	True	AATAAA	-14	NA	133005089	132993355	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_132994233_132995506_132995638_132995719_132995817_132997088_132997121_133004841
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122085	chr4	-	1484	6	FSM	ENSMUSG00000028857.17	ENSMUST00000105907.9	1484	6	0	0	0	0	multi-exon	FALSE	canonical	3	666	junction_4	52.562343935559	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTCTGTCATTTTCTT	NA	False	NA	-12	True	AATAAA	-14	NA	133005103	132993355	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_132994233_132995506_132995638_132995719_132995817_132997088_132997121_132998273_132998359_133004841
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122119	chr4	-	3816	15	NIC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	-15	-7	combination_of_known_splicesites	FALSE	canonical	2	11	junction_14	131.723659412345	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGGTGGCATTTG	8975	False	NA	-6	True	ATTAAA	-15	NA	133080204	133019776	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_133021697_133022508_133022702_133023726_133023905_133024730_133024967_133027871_133028046_133029029_133029139_133029693_133029767_133030861_133030978_133031461_133031557_133033134_133033318_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133080096
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122130	chr4	+	171	2	Antisense	novelGene_ENSMUSG00000037622.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTTTTTTTTTTTTTTT	253	False	NA	NA	False	NA	NA	NA	133039804	133040176	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr4_+_133039952_133040152
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122134	chr4	+	203	1	Intergenic	novelGene_3777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATGGCTGCCCTTAAGT	4684	False	NA	NA	False	AAAAAG	-7	NA	133082209	133082412	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_133082200_133082400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122138	chr4	+	4656	12	FSM	ENSMUSG00000028854.10	ENSMUST00000030669.8	4676	12	20	0	20	0	multi-exon	FALSE	canonical	3	38	junction_3	11.7922793063796	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCAGGGCTGCTTCCTGGG	177	False	NA	22	True	AATAAA	-23	NA	133097036	133151013	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_133098219_133139147_133139609_133142611_133142863_133143591_133143810_133145210_133145414_133146764_133146855_133147235_133147307_133147412_133147587_133147815_133147931_133148096_133148199_133148812_133148886_133149297
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122150	chr4	+	2288	2	FSM	ENSMUSG00000046694.7	ENSMUST00000051676.7	2287	2	1	-2	1	2	multi-exon	TRUE	canonical	3	34	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTATCTTTCTCCTGG	NA	False	NA	15	True	AATAAA	-19	NA	133207443	133215251	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_133207875_133213394
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122172	chr4	+	1897	4	NIC	ENSMUSG00000037600.17	novel	1699	4	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	21.9544984001001	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGCCTGGTCATCAGTT	5572	False	NA	9	True	NA	NA	NA	133246374	133258101	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_133246423_133255050_133256321_133257141_133257217_133257597
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122187	chr4	-	180	1	Intergenic	novelGene_3778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTACAAAACACACATGAATA	NA	False	NA	NA	False	NA	NA	NA	133294298	133294118	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_133294100_133294300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122192	chr4	+	208	1	Intergenic	novelGene_3779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCCCTCGAGACT	NA	False	NA	NA	False	NA	NA	NA	133301053	133301261	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_133301100_133301300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122198	chr4	+	1993	7	FSM	ENSMUSG00000028850.3	ENSMUST00000030662.3	2004	7	7	4	7	-4	multi-exon	FALSE	canonical	3	33	junction_3	9.82626864865578	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGATCTGCCTTAGTGAA	NA	False	NA	9	True	AATAAA	-16	NA	133302062	133311550	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_133302522_133305217_133305646_133307096_133307272_133307961_133308022_133309782_133309905_133310292_133310421_133310929
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122223	chr4	+	197	1	Intergenic	novelGene_3780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAAAGAGCCTCTCC	NA	False	NA	NA	False	NA	NA	NA	133354749	133354946	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_133354700_133354900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122235	chr4	-	221	1	Intergenic	novelGene_3781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTCACAGCAAGAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133382835	133382614	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_133382600_133382800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122263	chr4	+	215	1	Intergenic	novelGene_3782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAGATGGCTCAGTA	NA	False	NA	NA	False	NA	NA	NA	133529427	133529642	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_133529400_133529600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122270	chr4	+	214	1	Intergenic	novelGene_3783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATGGCTAGAGAGATGG	NA	False	NA	NA	False	AATAAA	-4	NA	133535969	133536183	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_133536000_133536200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122294	chr4	+	204	1	Intergenic	novelGene_3784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGACCCCACCTCAAAACA	NA	False	NA	NA	False	NA	NA	NA	133618035	133618239	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_133618000_133618200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122298	chr4	+	163	1	Intergenic	novelGene_3785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTTTTTTTTTTTTTT	3471	False	NA	3	True	NA	NA	NA	133629469	133629632	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_133629500_133629600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122304	chr4	-	219	1	Intergenic	novelGene_3786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTATTATTCCCTACAA	9914	False	NA	NA	False	NA	NA	NA	133664177	133663958	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_133664000_133664200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122314	chr4	-	191	1	Intergenic	novelGene_3787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATAAATAAAATTTGAGG	9071	False	NA	NA	False	NA	NA	NA	133677612	133677421	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_133677400_133677600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122317	chr4	-	1212	6	FSM	ENSMUSG00000003038.16	ENSMUST00000102553.11	1265	6	52	1	-40	-1	multi-exon	FALSE	canonical	3	1307	junction_3	652.309558415328	666	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCTCTGATCTTTCCC	NA	False	NA	NA	False	AATAAA	-24	NA	133695260	133692049	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_133692885_133693261_133693358_133693739_133693791_133694076_133694107_133694267_133694313_133695105
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122348	chr4	-	167	1	Intergenic	novelGene_3788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAAAGG	NA	False	NA	-1	True	NA	NA	NA	133768815	133768648	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_133768600_133768800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122364	chr4	+	1153	8	ISM	ENSMUSG00000012123.18	ENSMUST00000121391.8	4761	20	13853	2	-7	1	3prime_fragment	FALSE	canonical	3	103	junction_1	10.7532624380336	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGGTGGTCTCGTCT	NA	False	NA	15	True	NA	NA	NA	133809615	133819813	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_+_133809759_133809885_133809999_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122372	chr4	+	1552	15	FSM	ENSMUSG00000012126.17	ENSMUST00000074690.11	1573	15	20	1	0	0	multi-exon	TRUE	canonical	3	35	junction_2	24.8785827078437	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGCTTCACAAGGCTCT	NA	False	NA	14	True	AATAAA	-14	NA	133829913	133854086	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_133829960_133835562_133835667_133836401_133836431_133836870_133836970_133839825_133839921_133840225_133840281_133840667_133840745_133843341_133843469_133850702_133850915_133851152_133851231_133852144_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122384	chr4	-	729	3	FSM	ENSMUSG00000028843.9	ENSMUST00000030651.9	743	3	14	0	14	0	multi-exon	FALSE	canonical	3	1437	junction_2	42.5	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTGTGGTGTCCGGGTC	9240	False	NA	-5	True	ATTAAA	-22	NA	133856086	133854716	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_133855118_133855228_133855397_133855926
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122390	chr4	-	3893	14	FSM	ENSMUSG00000037443.14	ENSMUST00000040271.12	3893	14	1	-1	1	1	multi-exon	FALSE	canonical	3	315	junction_5	49.639648211447	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGTTTCCTAGTGCCTCC	NA	False	NA	NA	False	AATAAA	-16	NA	133914422	133857167	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_133858751_133859542_133859769_133861379_133861488_133864881_133864933_133866145_133866240_133875320_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133894599_133894753_133900123_133900192_133914253
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122397	chr4	+	195	1	Intergenic	novelGene_3789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAGCCACACGAGAAGAT	NA	False	NA	NA	False	NA	NA	NA	133859306	133859501	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_133859300_133859500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122411	chr4	+	190	1	Intergenic	novelGene_3790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGCTGCATATTTAATG	NA	False	NA	NA	False	NA	NA	NA	133916414	133916604	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_133916400_133916600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122415	chr4	+	189	1	Intergenic	novelGene_3791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGAAGAAGGAGAGGGT	NA	False	NA	NA	False	NA	NA	NA	133931537	133931726	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_133931500_133931700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122421	chr4	-	1981	3	FSM	ENSMUSG00000028840.11	ENSMUST00000030644.8	1994	3	-4	17	-4	1	multi-exon	FALSE	canonical	3	614	junction_2	27	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCAGTGTGCATGTATT	7664	False	NA	-10	True	NA	NA	NA	133972907	133970616	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_133972242_133972335_133972399_133972614
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122444	chr4	-	236	1	Intergenic	novelGene_3792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACACAGGCTGGGGAGATG	NA	False	NA	NA	False	NA	NA	NA	134051454	134051218	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_134051200_134051500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122451	chr4	+	3210	8	FSM	ENSMUSG00000028836.15	ENSMUST00000105874.9	3153	8	-57	0	-32	0	multi-exon	FALSE	canonical	3	255	junction_4	12.5324069711207	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTTGCCTTGCAGA	2024	False	NA	16	True	AATAAA	-21	NA	134070459	134081795	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_134070648_134071318_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122458	chr4	+	3127	7	FSM	ENSMUSG00000028836.15	ENSMUST00000081094.6	2023	7	188	-1292	188	1	multi-exon	FALSE	canonical	3	255	junction_3	13.4587848221483	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGAGTGTTTTGCCT	2772	False	NA	10	True	AATAAA	-15	NA	134071207	134081789	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122466	chr4	-	4150	11	FSM	ENSMUSG00000028838.12	ENSMUST00000030643.3	4126	11	-25	1	-25	-1	multi-exon	FALSE	canonical	3	37	junction_3	6.57951365983839	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCCGGGCTATAAATACGC	6998	False	NA	-1	True	AATAAA	-22	NA	134099894	134083683	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_134085142_134085288_134085458_134086395_134086557_134087059_134087147_134087842_134087933_134089611_134089719_134089893_134090027_134090393_134090514_134091891_134092000_134092208_134092300_134098268
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122472	chr4	+	3117	11	FSM	ENSMUSG00000037366.15	ENSMUST00000105869.9	2248	11	51	-920	1	-1	multi-exon	FALSE	canonical	3	35	junction_4	4.79687398208458	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGCTGGCTGGCTTTCTTC	1830	False	NA	19	True	ATTAAA	-21	NA	134123681	134154723	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_134123736_134130280_134130416_134131403_134131555_134132316_134132414_134138214_134138284_134139077_134139217_134140652_134140767_134145352_134145445_134147179_134147351_134149688_134149844_134152783
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122526	chr4	+	204	1	Intergenic	novelGene_3793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAAGGCCCTCTGTAGAG	8163	False	NA	NA	False	NA	NA	NA	134255118	134255322	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_134255100_134255300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122537	chr4	-	3410	12	FSM	ENSMUSG00000037306.14	ENSMUST00000054096.13	4715	12	-9	1314	-9	-1314	multi-exon	FALSE	canonical	3	25	junction_8	6.8947219003122	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATTGGACTCATTGGCC	NA	False	NA	NA	False	AATAAA	-21	NA	134431610	134290314	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_134291144_134291815_134291932_134293138_134293312_134296206_134296427_134303250_134303367_134305596_134305691_134308081_134308200_134311610_134311706_134318666_134318748_134320560_134320677_134367597_134367695_134430255
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122544	chr4	-	2691	9	FSM	ENSMUSG00000037295.8	ENSMUST00000037828.8	6549	9	1	3857	1	1165	multi-exon	TRUE	canonical	3	50	junction_1	8.8175960442742	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAGTATTGCTGGTAAC	NA	False	NA	0	True	AATAAA	-27	NA	134495334	134472721	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_134474511_134475592_134475628_134476647_134476779_134477269_134477354_134477692_134477766_134482503_134482619_134484651_134484765_134486229_134486373_134495126
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122551	chr4	+	196	1	Intergenic	novelGene_3794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTGGGGAGGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	134521549	134521745	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_134521500_134521700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122563	chr4	-	3851	11	FSM	ENSMUSG00000028826.15	ENSMUST00000030628.15	3826	11	-25	0	-25	0	multi-exon	FALSE	canonical	3	158	junction_8	24.8628236529965	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTCCTGCCTTTTTAA	NA	False	NA	NA	False	AATAAA	-20	NA	134580681	134530069	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555820_134557859_134558039_134560508_134560633_134563633_134563761_134565159_134565302_134580348
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122577	chr4	+	203	1	Intergenic	novelGene_3795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTACTGTACCATGTATA	8703	False	NA	NA	False	NA	NA	NA	134557067	134557270	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_134557100_134557300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122583	chr4	+	199	1	Intergenic	novelGene_3796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGGCATGGGGGGAGCT	NA	False	NA	NA	False	NA	NA	NA	134569798	134569997	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_134569800_134570000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122586	chr4	+	205	1	Intergenic	novelGene_3797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTGGGGACAGAGTCCC	NA	False	NA	NA	False	NA	NA	NA	134614857	134615062	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_134614900_134615100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122603	chr4	+	3079	4	FSM	ENSMUSG00000037266.19	ENSMUST00000148900.8	3051	4	-28	0	-28	0	multi-exon	FALSE	canonical	3	813	junction_2	40.8493165997507	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTAGTTGTGAATGGTAG	NA	False	NA	9	True	NA	NA	NA	134650874	134654982	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_134651079_134651185_134651794_134652603_134654130_134654241
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122621	chr4	+	1791	6	NIC	ENSMUSG00000037266.19	novel	2151	6	NA	NA	-1	0	intron_retention	FALSE	canonical	3	56	junction_4	376.334213166967	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650935	134654683	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_134651079_134651185_134651794_134652603_134652744_134653087_134653462_134654045_134654130_134654241
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122622	chr4	+	1417	5	FSM	ENSMUSG00000037266.19	ENSMUST00000078084.7	1749	5	33	299	-1	0	multi-exon	FALSE	canonical	3	162	junction_3	305.166348079207	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650935	134654683	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_134651079_134651185_134651794_134652603_134652744_134654045_134654130_134654241
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122624	chr4	+	2376	5	NIC	ENSMUSG00000037266.19	novel	2151	6	NA	NA	-1	1	intron_retention	FALSE	canonical	3	141	junction_3	314.200075588788	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGGATGTTGAATGTG	NA	False	NA	22	True	AATAAA	-22	NA	134650935	134654684	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_134651079_134651185_134651794_134652603_134652744_134653087_134654130_134654241
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122626	chr4	+	2126	5	NIC	ENSMUSG00000037266.19	novel	2151	6	NA	NA	-1	0	intron_retention	FALSE	canonical	3	19	junction_3	366.739945329112	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650935	134654683	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_134651079_134651185_134651794_134652603_134652744_134653336_134654130_134654241
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122629	chr4	+	2171	6	FSM	ENSMUSG00000037266.19	ENSMUST00000145364.8	2151	6	-20	0	-1	0	multi-exon	FALSE	canonical	3	46	junction_4	379.006385170488	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650935	134654683	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_134651079_134651185_134651794_134652603_134652744_134653087_134653133_134653336_134654130_134654241
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122646	chr4	+	2826	3	NIC	ENSMUSG00000037266.19	novel	734	5	NA	NA	-1	0	intron_retention	FALSE	canonical	3	813	junction_1	50	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650935	134654683	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_134651794_134652603_134654130_134654241
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122653	chr4	+	1585	7	NIC	ENSMUSG00000037266.19	novel	2151	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	46	junction_4	392.724988594648	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650937	134654683	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_134651079_134651185_134651794_134652603_134652744_134653087_134653133_134653336_134653462_134654045_134654130_134654241
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122681	chr4	-	4123	6	FSM	ENSMUSG00000037242.9	ENSMUST00000037099.9	4119	6	-1	-3	-1	3	multi-exon	FALSE	canonical	3	1299	junction_1	75.0269284990396	1537	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTTTTTTTTTTCTC	NA	False	NA	3	True	AATAAA	-22	NA	135000126	134941276	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134999828
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122703	chr4	-	3685	18	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	155	junction_8	305.61565296241	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCACTCACATTTATTCG	NA	False	NA	0	True	AATAAA	-19	NA	135080481	135047794	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059116_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122706	chr4	-	3814	18	FSM	ENSMUSG00000028809.17	ENSMUST00000136342.9	3152	18	-52	-610	25	0	multi-exon	FALSE	canonical	3	663	junction_5	197.323579826916	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCACTCACATTTATTCG	NA	False	NA	0	True	AATAAA	-19	NA	135080607	135047794	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122708	chr4	-	3686	18	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_5	295.204790801421	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCACTCACATTTATTCG	NA	False	NA	0	True	AATAAA	-19	NA	135080482	135047794	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054532_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122719	chr4	-	3720	17	FSM	ENSMUSG00000028809.17	ENSMUST00000105861.8	3797	17	77	0	0	0	multi-exon	FALSE	canonical	3	283	junction_5	249.404846271579	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCACTCACATTTATTCG	NA	False	NA	0	True	AATAAA	-19	NA	135080555	135047794	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122761	chr4	-	3574	18	NIC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	84	junction_13	317.863412158316	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGCCACTCACATTT	NA	False	NA	-5	True	AATAAA	-14	NA	135080462	135047799	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069795_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122795	chr4	+	193	1	Intergenic	novelGene_3798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAATAGTCAGAGCAAGAT	NA	False	NA	NA	False	NA	NA	NA	135075538	135075731	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_135075500_135075700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122798	chr4	+	178	1	Intergenic	novelGene_3799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTCCGAGACAG	NA	False	NA	NA	False	NA	NA	NA	135082292	135082470	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_135082300_135082500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122811	chr4	-	5105	5	NIC	ENSMUSG00000059713.13	novel	5111	5	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	16.0078105935821	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATTGAGCAGTCTCTTC	NA	False	NA	-4	True	AATAAA	-22	NA	135161161	135139618	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_135143910_135145690_135145863_135147556_135147731_135152524_135152754_135160922
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122821	chr4	-	1905	12	FSM	ENSMUSG00000028803.19	ENSMUST00000102549.10	5153	12	92	3156	-25	129	multi-exon	FALSE	canonical	2	39	junction_10	9.94031776933574	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCCCCCTCTTTGCAAA	4280	False	NA	-23	True	AGTAAA	-16	NA	135221842	135179358	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_135179884_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122831	chr4	-	2789	16	NNC	ENSMUSG00000037188.8	novel	2789	16	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_11	58.2178285025778	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGTTTTCATGCGCTTCT	NA	False	NA	-1	True	AATAAA	-21	NA	135300943	135269197	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_-_135270085_135273553_135273619_135275723_135275810_135276549_135276639_135277606_135277642_135279056_135279191_135279310_135279390_135279846_135280006_135281823_135281919_135283113_135283226_135283397_135283552_135284154_135284229_135284478_135284825_135286413_135286476_135288479_135288667_135300718
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122832	chr4	-	2792	16	FSM	ENSMUSG00000037188.8	ENSMUST00000105855.2	2789	16	-2	-1	-2	1	multi-exon	FALSE	canonical	3	38	junction_6	62.4956531821747	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGTTTTCATGCGCTTCT	NA	False	NA	-1	True	AATAAA	-21	NA	135300943	135269197	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_135270085_135273553_135273619_135275723_135275810_135276549_135276639_135277606_135277642_135279056_135279194_135279310_135279390_135279846_135280006_135281823_135281919_135283113_135283226_135283397_135283552_135284154_135284229_135284478_135284825_135286413_135286476_135288479_135288667_135300718
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122885	chr4	+	3802	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	216	junction_3	561.471875223209	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTTTTCTGTAGACT	4698	False	NA	23	True	AATAAA	-28	NA	135583434	135597219	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589081_135589189_135590350_135590514_135590833_135590888_135594436
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122921	chr4	+	2435	8	FSM	ENSMUSG00000028673.11	ENSMUST00000030434.5	2525	8	-8	98	-8	-98	multi-exon	FALSE	canonical	3	268	junction_1	34.7786000351964	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGAAGTAAATTTGTATG	NA	False	NA	NA	False	NA	NA	NA	135648037	135667524	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_135648462_135650277_135650413_135652859_135652998_135657209_135657316_135660209_135660411_135662000_135662192_135664233_135664334_135666384
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122934	chr4	+	1410	9	FSM	ENSMUSG00000028672.14	ENSMUST00000030432.8	1418	9	5	3	5	-3	multi-exon	FALSE	canonical	3	659	junction_3	79.965617611571	271	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTCAAACGTGTGTTTAT	NA	False	NA	NA	False	ATTAAA	-20	NA	135673763	135689925	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_135673852_135677860_135677945_135679681_135679790_135681167_135681264_135682897_135683047_135686033_135686098_135687287_135687477_135688093_135688220_135689419
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122942	chr4	-	177	1	Intergenic	novelGene_3800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	135684713	135684536	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_135684500_135684700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122961	chr4	-	1626	10	FSM	ENSMUSG00000028670.15	ENSMUST00000067567.5	1626	10	0	0	0	0	multi-exon	TRUE	canonical	3	407	junction_1	24.7476149243608	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTCCCTTATGTGGTACA	NA	False	NA	-11	True	ATTAAA	-20	NA	135699937	135695534	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_135696379_135696454_135696629_135696738_135696841_135696911_135696986_135697113_135697185_135697269_135697318_135697764_135697831_135697918_135697951_135698170_135698277_135699828
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122987	chr4	-	4648	11	FSM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	60	0	60	0	multi-exon	FALSE	canonical	3	104	junction_6	17.5182761709022	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGAGCCTTTCCTCAT	7764	False	NA	-1	True	AATAAA	-17	NA	135749014	135730678	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_135732989_135733481_135733661_135734422_135734535_135735090_135735272_135736356_135736455_135736556_135736713_135737060_135737176_135737539_135738720_135740180_135740288_135741710_135741768_135748861
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000122994	chr4	+	203	1	Intergenic	novelGene_3801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGCAGGTAGCAGGGTAG	7646	False	NA	NA	False	NA	NA	NA	135735799	135736002	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_135735800_135736000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123004	chr4	-	889	6	FSM	ENSMUSG00000059291.16	ENSMUST00000102536.11	833	6	-6	-50	-6	50	multi-exon	FALSE	canonical	3	383	junction_1	3915.89487090754	364	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCAGGTGTCCCTTGTTTG	NA	False	NA	-9	True	NA	NA	NA	135780710	135776991	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_135777328_135777590_135777702_135778481_135778614_135778924_135779032_135779877_135780029_135780658
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123029	chr4	+	208	1	Intergenic	novelGene_3802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACGGGCTGGTGAGATGG	9674	False	NA	NA	False	NA	NA	NA	136007103	136007311	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_136007100_136007300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123032	chr4	+	4527	3	FSM	ENSMUSG00000051351.15	ENSMUST00000069195.5	4639	3	22	90	-15	-90	multi-exon	FALSE	canonical	2	10	junction_1	4	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGAGTTATCTTGGTAA	NA	False	NA	17	True	ATTAAA	-23	NA	136013399	136021163	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_136013793_136014382_136014627_136017273
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123040	chr4	+	2691	11	FSM	ENSMUSG00000066037.15	ENSMUST00000105850.8	2683	11	-8	0	-8	0	multi-exon	FALSE	canonical	3	160	junction_1	130.381325349914	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTCAAATTCAATTGT	NA	False	NA	32	True	AATAAA	-26	NA	136038270	136067992	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_136038401_136041400_136041567_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123050	chr4	+	2686	11	FSM	ENSMUSG00000066037.15	ENSMUST00000148843.10	21452	11	0	18766	0	0	multi-exon	FALSE	canonical	3	130	junction_1	138.01771625411	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTCAAATTCAATTGT	NA	False	NA	32	True	AATAAA	-26	NA	136038278	136067992	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_136038401_136041397_136041567_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123051	chr4	+	2520	10	FSM	ENSMUSG00000066037.15	ENSMUST00000084219.12	2647	10	-57	184	0	-2	multi-exon	FALSE	canonical	3	84	junction_2	166.354225660371	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTATTTCAAATTCAATT	NA	False	NA	30	True	AATAAA	-24	NA	136038278	136067990	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_136038401_136043671_136043796_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123052	chr4	+	2517	10	FSM	ENSMUSG00000066037.15	ENSMUST00000131671.8	2543	10	26	0	0	0	multi-exon	FALSE	canonical	3	289	junction_1	97.5394823509124	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTCAAATTCAATTGT	NA	False	NA	32	True	AATAAA	-26	NA	136038278	136067992	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_136038401_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123082	chr4	+	198	1	Intergenic	novelGene_3803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCACACTTGAGCTTATG	NA	False	NA	NA	False	NA	NA	NA	136098434	136098632	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_136098400_136098600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123084	chr4	+	214	1	Intergenic	novelGene_3804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATGGGTCATGGGTTTC	NA	False	NA	NA	False	NA	NA	NA	136112284	136112498	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_136112300_136112500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123089	chr4	+	200	1	Intergenic	novelGene_3805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGGCAAAAAGCTGGTTA	NA	False	NA	NA	False	NA	NA	NA	136116349	136116549	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_136116300_136116500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123097	chr4	+	183	1	Intergenic	novelGene_3806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATGGGGGATGGGG	NA	False	NA	NA	False	NA	NA	NA	136117742	136117925	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_136117700_136117900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123100	chr4	+	176	1	Intergenic	novelGene_3807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGAGCGAGTGGGACT	NA	False	NA	NA	False	NA	NA	NA	136133120	136133296	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_136133100_136133300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123110	chr4	+	7436	4	FSM	ENSMUSG00000001089.15	ENSMUST00000105849.9	7438	4	3	-1	3	1	multi-exon	FALSE	canonical	3	86	junction_2	34.7658836600865	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGAGTCAGTGATGCCA	4160	False	NA	16	True	AATAAA	-22	NA	136197074	136276631	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_136197162_136248651_136248755_136267666_136270830_136272548
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123125	chr4	-	3075	19	FSM	ENSMUSG00000036940.16	ENSMUST00000116273.9	3008	19	-67	0	-67	0	multi-exon	FALSE	canonical	3	907	junction_17	208.707545398275	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAATTGTGTGTGTGTG	NA	False	NA	-5	True	AATAAA	-30	NA	136330101	136277850	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136320275_136320442_136329542
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123128	chr4	-	3133	20	FSM	ENSMUSG00000036940.16	ENSMUST00000105847.8	3028	20	-101	-4	-65	0	multi-exon	FALSE	canonical	3	991	junction_18	209.393504887799	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAATTGTGTGTGTGTG	NA	False	NA	-5	True	AATAAA	-30	NA	136330099	136277850	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136309350_136309411_136320275_136320442_136329542
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123146	chr4	-	198	1	Antisense	novelGene_ENSMUSG00000103119.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGAGCAAGAGTGACGT	NA	False	NA	NA	False	NA	NA	NA	136368922	136368724	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr4_-_136368700_136368900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123151	chr4	-	4092	16	FSM	ENSMUSG00000028664.15	ENSMUST00000105845.9	10902	16	-24	6834	-24	273	multi-exon	FALSE	canonical	3	19	junction_7	4.97728172131469	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTTGAGGACTTGATC	NA	False	NA	0	True	AATGAA	-20	NA	136563323	136381683	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_136382742_136383223_136383380_136384713_136384908_136386245_136386396_136386873_136387090_136387962_136388211_136388704_136388828_136399753_136399819_136400573_136400683_136402678_136402842_136411230_136411356_136421045_136421382_136423309_136423466_136498266_136498952_136501890_136501956_136563080
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123155	chr4	-	7291	19	NIC	ENSMUSG00000060862.11	novel	7192	19	NA	NA	0	-4	combination_of_known_junctions	TRUE	canonical	3	15	junction_6	4.22697101369495	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAACTGTGGCTTGTGTGTT	9678	False	NA	-2	True	AATAAA	-16	NA	136776112	136707046	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_136710556_136712124_136712352_136713793_136713881_136714519_136714683_136715858_136716074_136718808_136718974_136721655_136721863_136722561_136723024_136723335_136723505_136725131_136725266_136725807_136726010_136726786_136726924_136728204_136728286_136728511_136728705_136734348_136734492_136735045_136735209_136744587_136744722_136745334_136746079_136775956
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123158	chr4	-	2141	6	FSM	ENSMUSG00000006699.18	ENSMUST00000051477.13	2108	6	-33	0	-33	0	multi-exon	FALSE	canonical	3	1589	junction_5	116.347067002138	1050	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAAGGTTATTTTCCTC	NA	False	NA	-1	True	ATTAAA	-24	NA	137085064	137047006	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_137048504_137056023_137056222_137056325_137056436_137059717_137059791_137063285_137063441_137084956
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123176	chr4	+	190	1	Intergenic	novelGene_3808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	369	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGGCCGGGCGTGGTGGC	NA	False	NA	NA	False	NA	NA	NA	137090670	137090860	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_137090700_137090900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123186	chr4	+	160	1	Intergenic	novelGene_3809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAATTTAAGTCTTAG	NA	False	NA	NA	False	NA	NA	NA	137100188	137100348	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_137100200_137100300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123190	chr4	-	183	1	Intergenic	novelGene_3810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAGTAAAGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	137119739	137119556	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_137119600_137119700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123196	chr4	-	177	1	Intergenic	novelGene_3811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCCTTTTGTAAGTTG	NA	False	NA	NA	False	NA	NA	NA	137123391	137123214	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_137123200_137123400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123202	chr4	+	161	1	Intergenic	novelGene_3812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGGCCAAGGTCACACA	4222	False	NA	NA	False	NA	NA	NA	137301117	137301278	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_137301100_137301300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123212	chr4	+	5729	27	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	15	0	intron_retention	FALSE	canonical	3	659	junction_9	223.123509724359	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGAGTGAGTTCTTTGTC	518	False	NA	23	True	ATTAAA	-33	NA	137321465	137385848	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123219	chr4	+	5713	27	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	25	0	intron_retention	FALSE	canonical	3	237	junction_13	300.621053406908	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	528	False	NA	17	True	ATTAAA	-27	NA	137321475	137385842	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123222	chr4	+	5764	28	FSM	ENSMUSG00000043411.16	ENSMUST00000055131.13	5722	28	-42	0	25	0	multi-exon	FALSE	canonical	3	555	junction_19	271.050863574936	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	528	False	NA	17	True	ATTAAA	-27	NA	137321475	137385842	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123267	chr4	+	3527	28	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	10	12	combination_of_known_junctions	FALSE	canonical	3	237	junction_13	327.669427582573	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGTGTTTCAGATTTTCT	580	False	NA	20	True	AATAAA	-32	NA	137321527	137383654	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123288	chr4	+	3237	24	NIC	ENSMUSG00000041351.17	novel	1216	11	NA	NA	5	0	combination_of_known_junctions	TRUE	canonical	3	20	junction_1	40.9493208845687	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	3342	False	NA	11	True	AATAAA	-21	NA	137392041	137457172	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_137392156_137431384_137431479_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455675_137455838_137455880_137456185
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123296	chr4	+	247	1	Intergenic	novelGene_3813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCCAGTGCTGATCTCTG	8726	False	NA	NA	False	NA	NA	NA	137397425	137397672	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_137397400_137397700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123310	chr4	-	184	1	Intergenic	novelGene_3814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAGTGGATAAAAATA	NA	False	NA	NA	False	NA	NA	NA	137453617	137453433	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_137453400_137453600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123319	chr4	-	2547	12	FSM	ENSMUSG00000028766.11	ENSMUST00000030551.11	2522	12	-22	-3	-22	3	multi-exon	FALSE	canonical	3	1320	junction_11	106.491531498949	508	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTCTTTGTGGTCAGT	NA	False	NA	1	True	AATAAA	-27	NA	137523717	137469040	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137523552
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123343	chr4	+	188	1	Intergenic	novelGene_3815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGGCCATCCTTTGCTA	8476	False	NA	NA	False	NA	NA	NA	137519560	137519748	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_137519600_137519700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123356	chr4	+	203	1	Intergenic	novelGene_3816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGACAGTGAGGTGAAGG	NA	False	NA	NA	False	NA	NA	NA	137637214	137637417	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_137637200_137637400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123366	chr4	+	4701	19	NIC	ENSMUSG00000057530.15	novel	728	5	NA	NA	43	0	combination_of_known_junctions	TRUE	canonical	3	26	junction_1	12.6238310789994	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGTGTCTGTGTGTCTG	499	False	NA	16	True	AATAAA	-16	NA	137640824	137692540	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_137640941_137641078_137641166_137648331_137648474_137653529_137653743_137662571_137662694_137663968_137664116_137664649_137664716_137665934_137666127_137672327_137672471_137673565_137673681_137675854_137675966_137676757_137676857_137677466_137677545_137678808_137678913_137683768_137683880_137684445_137684514_137685309_137685501_137688953_137689050_137690040
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123374	chr4	+	194	1	Intergenic	novelGene_3817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTGTGCATGGGAAAGGA	NA	False	NA	NA	False	NA	NA	NA	137787610	137787804	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_137787600_137787800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123393	chr4	+	192	1	Intergenic	novelGene_3818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAGACATGTGACCAGGC	2568	False	NA	NA	False	NA	NA	NA	138022350	138022542	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_138022400_138022500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123396	chr4	+	2139	11	FSM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	-24	5	-24	-5	multi-exon	FALSE	canonical	3	2240	junction_8	67.8427593778437	1112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTATCAGTGTTCTTTT	NA	False	NA	32	True	NA	NA	NA	138032016	138039934	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038950_138039058_138039144
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123422	chr4	+	181	1	Intergenic	novelGene_3819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAACCATTATCTTC	4101	False	NA	NA	False	NA	NA	NA	138130604	138130785	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_138130600_138130800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123438	chr4	+	2512	2	FSM	ENSMUSG00000046447.4	ENSMUST00000050918.4	4444	2	-47	1979	-47	-1979	multi-exon	FALSE	canonical	3	239	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTCGTTAGCCTTGTTT	5697	False	NA	19	True	AATAAA	-19	NA	138181577	138185455	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_138182663_138184028
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123447	chr4	+	664	3	Intergenic	novelGene_3820	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	52	junction_1	9.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTATATCTTTTCTGA	4294	False	NA	3	True	NA	NA	NA	138225895	138255983	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_138226002_138226562_138226737_138255599
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123461	chr4	+	208	1	Intergenic	novelGene_3821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCGATAATAATAATAAATA	NA	False	NA	35	True	NA	NA	NA	138551716	138551924	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_138551700_138551900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123467	chr4	-	1694	8	FSM	ENSMUSG00000041161.9	ENSMUST00000097830.4	1668	8	-26	0	-26	0	multi-exon	TRUE	canonical	3	21	junction_7	2.1380899352994	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGTTTCTCTCTCATT	NA	False	NA	0	True	NA	NA	NA	138641282	138622689	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_138623226_138624026_138624209_138624867_138624965_138625317_138625450_138629162_138629286_138632467_138632581_138636792_138636942_138640920
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123482	chr4	+	209	1	Intergenic	novelGene_3822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGGGATGCTGAAGACAA	NA	False	NA	NA	False	NA	NA	NA	138702062	138702271	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_138702100_138702300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123491	chr4	-	558	4	FSM	ENSMUSG00000050608.12	ENSMUST00000143971.2	2549	4	23	1968	23	9	multi-exon	FALSE	canonical	3	2580	junction_1	67.4553350167518	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGCCTTTATTCCTTTA	5202	False	NA	-11	True	AATAAA	-25	NA	138858401	138831092	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_138831324_138832300_138832411_138833166_138833215_138858232
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123508	chr4	+	184	1	Intergenic	novelGene_3823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATATATGATCAAGAATAT	NA	False	NA	NA	False	NA	NA	NA	138860711	138860895	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_138860700_138860900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123514	chr4	+	1678	9	FSM	ENSMUSG00000028745.19	ENSMUST00000102508.10	1674	9	-1	-3	-1	3	multi-exon	FALSE	canonical	3	1402	junction_1	117.624136553685	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCTGGCTGTACGTTCTTG	NA	False	NA	11	True	NA	NA	NA	138920208	139019132	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_138920340_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339_139014406_139015066_139015144_139018313
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123520	chr4	+	188	1	Intergenic	novelGene_3824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAAGGTTGGGCTGGAGA	NA	False	NA	NA	False	NA	NA	NA	139020467	139020655	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_139020500_139020700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123535	chr4	-	1510	9	FSM	ENSMUSG00000028744.16	ENSMUST00000053862.12	1532	9	25	-3	2	3	multi-exon	FALSE	canonical	3	103	junction_8	18.155147341732	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTCTGCTGCTCCTT	NA	False	NA	0	True	AGTAAA	-18	NA	139037994	139025835	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_139026281_139027536_139027723_139028322_139028416_139028560_139028704_139029100_139029189_139029735_139029866_139033753_139034002_139035039_139035162_139037939
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123543	chr4	+	1297	7	FSM	ENSMUSG00000028743.8	ENSMUST00000073787.7	1288	7	-9	0	-9	0	multi-exon	FALSE	canonical	3	253	junction_5	35.9787746070127	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCGTCTCCTCTGCTGCCC	NA	False	NA	29	True	AATAAA	-40	NA	139038045	139045737	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_139038388_139041414_139041603_139041777_139041883_139044020_139044118_139044244_139044345_139044880_139045011_139045402
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123550	chr4	+	98	1	Intergenic	novelGene_3825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAGGTAGAAGGAGTTAA	NA	False	NA	NA	False	NA	NA	NA	139050663	139050761	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_139050700_139050800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123576	chr4	-	182	1	Intergenic	novelGene_3826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTGGTTTTTTTTTATG	8633	False	NA	NA	False	NA	NA	NA	139084418	139084236	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_139084200_139084400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123585	chr4	+	3396	15	FSM	ENSMUSG00000028737.16	ENSMUST00000039818.10	3382	15	-11	-3	-11	3	multi-exon	FALSE	canonical	3	190	junction_3	22.7807876447301	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGATCGTGTGTGTCCTT	NA	False	NA	29	True	NA	NA	NA	139350165	139377004	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_139350509_139361025_139361120_139361207_139361301_139361974_139362023_139362699_139362856_139364269_139364420_139364496_139364572_139365685_139365874_139367923_139367998_139369387_139369585_139369824_139369873_139370700_139370854_139371422_139371545_139372289_139372409_139375468
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123601	chr4	-	1995	10	FSM	ENSMUSG00000040972.9	ENSMUST00000039331.9	1979	10	-20	4	-20	-4	multi-exon	FALSE	canonical	3	57	junction_6	13.4421485642992	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGTCTGGCCCTATATT	NA	False	NA	-3	True	ATTAAA	-24	NA	139974115	139754160	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_139754390_139755034_139755074_139755359_139755553_139756008_139756095_139761661_139762137_139764733_139764850_139794447_139794567_139834565_139834688_139884771_139884885_139973612
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123609	chr4	+	189	1	Intergenic	novelGene_3827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATTCTAGAAAAAGCTCA	4791	False	NA	NA	False	NA	NA	NA	139928248	139928437	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_139928200_139928400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123610	chr4	-	181	1	Intergenic	novelGene_3828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAGAAACTGCACTAT	NA	False	NA	NA	False	NA	NA	NA	140027713	140027532	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_140027500_140027700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123619	chr4	-	4455	27	FSM	ENSMUSG00000040964.17	ENSMUST00000097820.9	4382	27	-73	0	-73	0	multi-exon	TRUE	canonical	3	130	junction_20	26.9722901858523	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGGTTTATGGGA	NA	False	NA	-2	True	AATAAA	-18	NA	140376140	140241795	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123629	chr4	-	4571	28	FSM	ENSMUSG00000040964.17	ENSMUST00000039204.10	4493	28	-79	1	-73	-1	multi-exon	FALSE	canonical	3	51	junction_21	42.1702734351014	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTGTGGGGTTTATGGG	NA	False	NA	-3	True	AATAAA	-17	NA	140376140	140241796	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140314094_140314212_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123657	chr4	+	3735	13	NNC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	363	0	at_least_one_novel_splicesite	FALSE	canonical	3	140	junction_1	1255.58957764868	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGGCTTTCATGATTCCT	2744	False	NA	28	True	AATAAA	-21	NA	140429146	140450531	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_140429293_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123674	chr4	+	3351	12	NNC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	2428	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	1322.08953698365	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGGCTTTCATGATTCCT	4809	False	NA	28	True	AATAAA	-21	NA	140431211	140450531	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_140431263_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123713	chr4	+	178	1	Intergenic	novelGene_3829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	140620442	140620620	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_140620400_140620600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123719	chr4	+	194	1	Intergenic	novelGene_3830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTTTTTGAAGCGGAGG	NA	False	NA	NA	False	NA	NA	NA	140681934	140682128	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_140681900_140682100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123724	chr4	+	1077	8	FSM	ENSMUSG00000009863.15	ENSMUST00000010007.9	1142	8	71	-6	71	6	multi-exon	FALSE	canonical	3	2820	junction_2	205.868890316143	477	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTCTCCATTATTACCAA	NA	False	NA	NA	False	AATAAA	-20	NA	140688584	140706510	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_140688788_140693805_140693940_140698447_140698534_140700193_140700331_140700974_140701092_140703425_140703528_140704688_140704812_140706335
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123775	chr4	-	1881	8	FSM	ENSMUSG00000028923.15	ENSMUST00000030760.15	1906	8	25	0	10	0	multi-exon	TRUE	canonical	3	362	junction_3	45.6883855200484	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGATGGATATGTTTTT	8510	False	NA	-10	True	AATAAA	-22	NA	140805643	140793822	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_140794924_140795505_140795591_140797366_140797545_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123797	chr4	-	885	3	FSM	ENSMUSG00000040842.18	ENSMUST00000094549.11	3203	3	6	2312	-3	1254	multi-exon	FALSE	canonical	3	212	junction_2	123	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTCTTTTTTTTTTTTT	NA	False	NA	-19	True	NA	NA	NA	140867080	140842623	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_140843176_140845837_140846093_140867002
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123812	chr4	+	179	1	Intergenic	novelGene_3831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAGGAGAAGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	140854033	140854212	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_140854000_140854200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123826	chr4	+	5918	10	FSM	ENSMUSG00000028920.10	ENSMUST00000030757.10	5934	10	16	0	7	0	multi-exon	FALSE	canonical	3	178	junction_2	13.4283650402542	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTGTTTTATTAGTATA	NA	False	NA	15	True	AATAAA	-19	NA	140875239	140931373	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_140875491_140895023_140895289_140898134_140898252_140907708_140907844_140920975_140921130_140922491_140922603_140924793_140924891_140925352_140925410_140926240_140926358_140926759
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123833	chr4	+	189	1	Intergenic	novelGene_3832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATCTCCCAATAGT	1881	False	NA	NA	False	NA	NA	NA	140951951	140952140	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_140952000_140952100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123854	chr4	+	3915	17	FSM	ENSMUSG00000006445.4	ENSMUST00000006614.3	3913	17	-2	0	-2	0	multi-exon	FALSE	canonical	3	98	junction_7	17.9965274428152	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTTTCATTCCTGGA	NA	False	NA	8	True	AATAAA	-22	NA	141028548	141056695	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_141028746_141033824_141033893_141035715_141036392_141043897_141044054_141044181_141044515_141045792_141045909_141046233_141046388_141047804_141047905_141048527_141048584_141048775_141048902_141049012_141049202_141049373_141049436_141049513_141049724_141049896_141050047_141050723_141050918_141051542_141051699_141055723
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123857	chr4	-	183	1	Intergenic	novelGene_3833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	4895	False	NA	NA	False	NA	NA	NA	141073425	141073242	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_141073200_141073400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123861	chr4	-	179	1	Intergenic	novelGene_3834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAATATTTTAAACAA	4960	False	NA	NA	False	NA	NA	NA	141083259	141083080	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_141083100_141083300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123871	chr4	+	185	1	Intergenic	novelGene_3835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAAGGTTTTTTTTTTTTT	5929	False	NA	NA	False	NA	NA	NA	141113031	141113216	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_141113000_141113200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123877	chr4	-	246	1	Intergenic	novelGene_3836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACGTACAAATTTGCACA	NA	False	NA	NA	False	NA	NA	NA	141118259	141118013	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_141118000_141118300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123884	chr4	-	888	6	ISM	ENSMUSG00000006216.11	ENSMUST00000006378.9	2370	20	7993	4	-2664	-4	3prime_fragment	FALSE	canonical	3	74	junction_3	20.1454709550311	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTAGTGTCCCCTCTCC	4471	False	NA	-8	True	AATAAA	-14	NA	141135332	141131667	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_-_141131944_141132063_141132151_141132362_141132447_141132582_141132672_141134399_141134534_141135114
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123893	chr4	-	199	1	Intergenic	novelGene_3837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATACATACATACATACATA	NA	False	NA	NA	False	NA	NA	NA	141145708	141145509	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_141145500_141145700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123916	chr4	+	301	1	Intergenic	novelGene_3838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTATATTTATACAGATG	773	False	NA	NA	False	NA	NA	NA	141283699	141284000	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_141283700_141284000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123923	chr4	+	180	1	Intergenic	novelGene_3839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTAAAAAAAAAAATGCCTC	1601	False	NA	NA	False	NA	NA	NA	141284527	141284707	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_141284500_141284700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123926	chr4	+	384	1	Intergenic	novelGene_3840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAAACTCTGTCGGTCTC	4103	False	NA	33	True	NA	NA	NA	141288914	141289298	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_141288900_141289300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123934	chr4	-	3073	9	FSM	ENSMUSG00000006219.13	ENSMUST00000105784.8	3036	9	-31	-6	-31	6	multi-exon	FALSE	canonical	3	1168	junction_5	205.258944689385	1813	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTTTTGTCTGGGGTG	NA	False	NA	2	True	AATAAA	-20	NA	141327266	141303366	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123983	chr4	+	185	1	Intergenic	novelGene_3841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTAACTCAGGAATATCG	NA	False	NA	NA	False	NA	NA	NA	141339629	141339814	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_141339600_141339800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000123989	chr4	-	1472	6	FSM	ENSMUSG00000043085.15	ENSMUST00000053263.9	1671	6	199	0	-58	0	multi-exon	FALSE	canonical	3	57	junction_2	22.4535075210979	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCGTTGAGGATCACAGT	NA	False	NA	-4	True	AATAAA	-16	NA	141345350	141341543	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_141342018_141342255_141342447_141343514_141343933_141344605_141344781_141344950_141345024_141345209
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124006	chr4	-	175	1	Intergenic	novelGene_3842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATAAAGTCTTAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	141402044	141401869	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_141401900_141402000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124023	chr4	-	198	2	Antisense	novelGene_ENSMUSG00000040706.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTAGTCACGCCGGGCG	NA	False	NA	NA	False	NA	NA	NA	141480924	141414854	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr4_-_141415003_141480874
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124029	chr4	-	3966	15	FSM	ENSMUSG00000040697.11	ENSMUST00000038014.11	5969	15	204	1799	204	-1799	multi-exon	TRUE	canonical	3	44	junction_12	6.2974727681274	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCAGGCTTCATTCTTCC	NA	False	NA	NA	False	ATTAAA	-15	NA	141517998	141489298	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_141491206_141491878_141492050_141493794_141493894_141493972_141494054_141495018_141495096_141495201_141495385_141497163_141497348_141498217_141498349_141501811_141501971_141502676_141502782_141504205_141504391_141510083_141510418_141511998_141512066_141516199_141516385_141517900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124072	chr4	-	533	1	ISM	ENSMUSG00000040616.4	ENSMUST00000036572.4	1875	3	52780	0	52780	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGACCTCATTCAGTCA	NA	False	NA	-6	True	AATAAA	-18	NA	141758835	141758302	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_-_141758300_141758800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124082	chr4	+	218	1	Intergenic	novelGene_3843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTGAACCCCAAATACATT	1939	False	NA	NA	False	NA	NA	NA	141821032	141821250	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_141821000_141821200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124105	chr4	-	3855	8	FSM	ENSMUSG00000040606.15	ENSMUST00000036476.10	3843	8	-12	0	-12	0	multi-exon	FALSE	canonical	3	169	junction_3	28.2510610239614	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATTCTATGTGATTTGA	NA	False	NA	-3	True	AATAAA	-19	NA	141966724	141866550	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_141869108_141870604_141870656_141874328_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124115	chr4	-	185	1	Intergenic	novelGene_3844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGAAAGAGCTTAAAAATA	NA	False	NA	NA	False	NA	NA	NA	141893268	141893083	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_141893100_141893300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124135	chr4	+	3287	1	Intergenic	novelGene_3845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTATGTAAATGTGCCAT	NA	False	NA	NA	False	AAGAAA	-29	NA	142902159	142905446	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_142902200_142905400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124141	chr4	-	2681	6	FSM	ENSMUSG00000028583.15	ENSMUST00000030317.14	1817	6	48	-912	48	912	multi-exon	FALSE	canonical	3	463	junction_2	58.6153563496802	292	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCTTTCAAAATAAGTGAA	NA	False	NA	NA	False	NA	NA	NA	143026086	142993088	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_142994997_142995757_142995870_142997092_142997132_143000469_143000627_143002640_143002778_143025758
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124152	chr4	+	193	1	Intergenic	novelGene_3846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTCATACTCACAAGTTA	NA	False	NA	NA	False	NA	NA	NA	143019450	143019643	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_143019400_143019600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124158	chr4	+	155	1	Intergenic	novelGene_3847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTTTTTTTTAAAAAG	NA	False	NA	NA	False	NA	NA	NA	143069891	143070046	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_143069900_143070000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124167	chr4	+	3526	4	FSM	ENSMUSG00000046862.15	ENSMUST00000037356.8	3260	4	-266	0	-251	0	multi-exon	FALSE	canonical	3	80	junction_1	39.6316371938716	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTTCACTTCCTTTG	NA	False	NA	10	True	AATAAA	-17	NA	143139290	143147661	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_143139662_143143209_143143523_143143942_143144531_143145407
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124188	chr4	+	188	1	Intergenic	novelGene_3848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAACCAACATCAC	NA	False	NA	NA	False	NA	NA	NA	143193039	143193227	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_143193000_143193200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124192	chr4	-	4510	2	Intergenic	novelGene_3849	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTCTGTGGTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	143715175	143710575	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_143714711_143714800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124202	chr4	+	189	1	Intergenic	novelGene_3850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAGAGGGAGAAACTT	8978	False	NA	NA	False	NA	NA	NA	143728428	143728617	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_143728400_143728600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124206	chr4	-	178	1	Intergenic	novelGene_3851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGGGTATTTTATT	NA	False	NA	NA	False	NA	NA	NA	143882162	143881984	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_143882000_143882200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124212	chr4	+	179	1	Intergenic	novelGene_3852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAGTATAAGTTTTGGC	NA	False	NA	NA	False	NA	NA	NA	144042176	144042355	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_144042200_144042400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124225	chr4	+	2619	4	NNC	ENSMUSG00000078508.2	novel	1745	3	NA	NA	-3255	784	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	5.90668171555645	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGAGTATTTTTTTTC	NA	False	NA	NA	False	AATGAA	-13	NA	144053563	144060819	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_144053628_144056792_144057106_144057681_144058255_144059150
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124230	chr4	-	2431	4	FSM	ENSMUSG00000028591.12	ENSMUST00000030326.10	2460	4	29	0	-18	0	multi-exon	FALSE	canonical	3	80	junction_3	9.80929264637478	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTGGTTTTGCTT	NA	False	NA	-4	True	AATAAA	-15	NA	144135005	144118243	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_144119688_144121144_144121730_144122249_144122573_144134926
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124241	chr4	+	190	1	Intergenic	novelGene_3853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGTGTGTGTCTGGTCG	NA	False	NA	4	True	NA	NA	NA	144130315	144130505	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_144130300_144130500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124249	chr4	-	3819	10	FSM	ENSMUSG00000028599.11	ENSMUST00000030336.11	3818	10	-1	0	-1	0	multi-exon	FALSE	canonical	3	41	junction_7	11.2546286774228	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCTTATCTGTTTGTT	7831	False	NA	NA	False	AATAAA	-38	NA	144973441	144940032	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_144942671_144946298_144946507_144949523_144949559_144950072_144950151_144950821_144951055_144951381_144951476_144951899_144952053_144954037_144954167_144955573_144955677_144973293
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124255	chr4	+	5753	3	FSM	ENSMUSG00000085101.8	ENSMUST00000150529.2	545	3	-21	-5187	0	5187	multi-exon	FALSE	canonical	3	82	junction_2	10.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGAAGTCTCTCTTTTT	NA	False	NA	22	True	NA	NA	NA	145136814	145181513	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_145136997_145138756_145138851_145176036
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124288	chr4	+	3008	4	FSM	ENSMUSG00000078503.10	ENSMUST00000105742.8	2996	4	-13	1	-13	-1	multi-exon	FALSE	canonical	3	98	junction_2	195.188797492752	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTTGATTGTTTCCAA	881	False	NA	NA	False	NA	NA	NA	145237315	145265757	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_145237496_145257381_145257486_145261385_145261513_145263160
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124299	chr4	+	3056	5	NIC	ENSMUSG00000078503.10	novel	597	5	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	211.475028076603	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTTGATTGTTTCCAA	913	False	NA	NA	False	NA	NA	NA	145237347	145265757	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_145237496_145247375_145247456_145257381_145257486_145261385_145261513_145263160
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124313	chr4	+	2648	4	NNC	ENSMUSG00000078503.10	novel	2996	4	NA	NA	4049	-234	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	233.962960031426	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCTTAAAAGAGTATCTG	3542	False	NA	40	True	AATAAA	-16	NA	145245502	145265524	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_145245556_145257381_145257486_145261385_145261513_145263160
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124322	chr4	+	4219	1	Intergenic	novelGene_3854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAGTCCAGAAGACTC	1618	False	NA	NA	False	AATAAA	-40	NA	145269666	145273885	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_145269700_145273900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124332	chr4	+	188	1	Intergenic	novelGene_3855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGGAACGTGCTGAGATG	NA	False	NA	NA	False	NA	NA	NA	145369546	145369734	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_145369500_145369700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124359	chr4	+	215	1	NIC	ENSMUSG00000082334.2	novel	1446	2	NA	NA	487	-954	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAGAGTGCTGATTTCC	NA	False	NA	NA	False	NA	NA	NA	145472802	145473017	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_145472800_145473000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124379	chr4	+	2187	3	Genic_Genomic	ENSMUSG00000096233.2	novel	780	1	NA	NA	-401	5691	multi-exon	FALSE	canonical	0	0	junction_1	8	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAGCCACTGTGAAAATT	NA	False	NA	NA	False	NA	NA	NA	145563387	145570259	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr4_+_145563542_145563716_145565060_145569569
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124383	chr4	+	207	1	Intergenic	novelGene_3856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAACAGCAGGAAGC	5151	False	NA	NA	False	NA	NA	NA	145590351	145590558	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_145590400_145590600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124390	chr4	+	929	1	Intergenic	novelGene_3857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGCTTTGGTTGTTTTC	NA	False	NA	22	True	NA	NA	NA	145986545	145987474	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_145986500_145987500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124397	chr4	-	199	1	Intergenic	novelGene_3858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATTTACACTAACACAAC	NA	False	NA	NA	False	NA	NA	NA	146029567	146029368	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_146029400_146029600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124401	chr4	+	2895	4	FSM	ENSMUSG00000066009.9	ENSMUST00000091878.6	2798	4	-94	-3	-47	3	multi-exon	FALSE	canonical	3	78	junction_2	56.5115524079418	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146033820	146063194	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_146034017_146054375_146054480_146058453_146058581_146060726
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124405	chr4	+	2762	3	NIC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	-41	3	combination_of_known_splicesites	FALSE	canonical	3	72	junction_2	50	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146033826	146063194	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_146034017_146054375_146054480_146060726
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124421	chr4	+	2889	4	NNC	ENSMUSG00000066009.9	novel	410	4	NA	NA	4248	3	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	76.4852927038918	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146038162	146063194	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_146038353_146054375_146054480_146058453_146058581_146060726
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124431	chr4	+	2720	3	NNC	ENSMUSG00000066009.9	novel	410	4	NA	NA	4290	3	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	19.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146038204	146063194	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_146038353_146054375_146054480_146060726
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124437	chr4	+	4217	5	NNC	ENSMUSG00000066007.16	novel	724	2	NA	NA	-55160	2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	214.304106353565	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	146038233	146135327	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_146038353_146094927_146095022_146126781_146126867_146129876_146130004_146131535
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124445	chr4	+	4293	6	NNC	ENSMUSG00000066007.16	novel	724	2	NA	NA	-55160	2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	187.318552204527	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	146038233	146135327	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_146038353_146094927_146095022_146102109_146102186_146126781_146126867_146129876_146130004_146131535
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124452	chr4	-	312	2	Antisense	novelGene_ENSMUSG00000066007.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	171	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTTTTTTAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	146100483	146041674	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr4_-_146041823_146100319
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124475	chr4	+	3986	7	NNC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	10	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	187.323027593157	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	146093403	146135328	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_146093548_146094927_146095022_146126784_146126867_146129876_146130004_146131535_146132094_146132178_146132766_146132934
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124519	chr4	+	2077	4	Intergenic	novelGene_3859	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	86	junction_2	238.174072663019	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	2304	False	NA	NA	False	NA	NA	NA	146289362	146319729	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_146289526_146291416_146291510_146312913_146312972_146317966
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124541	chr4	+	4461	6	Intergenic	novelGene_3861	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	157.887808269036	34	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	146365140	146806011	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_146365259_146428065_146428160_146435241_146435318_146797295_146797381_146800390_146800518_146802050
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124542	chr4	+	4456	6	Intergenic	novelGene_3860	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	160.373813323747	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGGCTGTTTTCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	146365140	146806009	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_146365259_146428065_146428160_146435241_146435318_146797298_146797381_146800390_146800518_146802050
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124543	chr4	+	4385	5	Intergenic	novelGene_3862	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	182.986850620475	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	146365140	146806011	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_146365259_146428065_146428160_146797295_146797381_146800390_146800518_146802050
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124558	chr4	+	4425	5	Intergenic	novelGene_3863	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	181.743638127996	196	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTGTTTTCAGTTTGC	NA	False	NA	NA	False	AATAAA	-24	NA	146370006	146806013	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_146370163_146428065_146428160_146797295_146797381_146800390_146800518_146802050
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124569	chr4	+	3183	4	Intergenic	novelGene_3864	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	40	junction_1	34.5864456430872	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	146370013	146393561	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_146370163_146384326_146384431_146388486_146388614_146390758
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124575	chr4	+	3055	3	Intergenic	novelGene_3865	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	33	junction_2	3.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	146370014	146393561	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_146370163_146384326_146384431_146390758
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124586	chr4	+	4395	5	Intergenic	novelGene_3866	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	189.475592095658	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146370043	146806007	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_146370163_146428065_146428160_146797295_146797381_146800377_146800518_146802050
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124588	chr4	+	4383	5	Intergenic	novelGene_3867	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	174.720312213549	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	146370043	146806011	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_146370163_146428065_146428160_146797298_146797381_146800390_146800518_146802050
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124599	chr4	+	4276	6	Intergenic	novelGene_3868	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_5	178.524620150835	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	146370068	146806011	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_146370163_146428065_146428160_146797295_146797381_146800390_146800518_146802050_146803953_146804037
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124615	chr4	+	4424	5	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159925	182161	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	189.146107546521	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTGTTTTCAGTTTGC	NA	False	NA	NA	False	AATAAA	-24	NA	146426558	146806013	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800390_146800518_146802050
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124657	chr4	+	952	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33243	-4077	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	259.684049482358	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146500236	146550672	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_146500544_146502756_146502850_146508052_146508139_146533486_146533533_146547961_146548020_146548860_146548988_146550437
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124669	chr4	+	897	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33230	-4077	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	287.112800132631	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146500249	146550672	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_146500588_146502756_146502850_146533486_146533533_146547961_146548020_146548860_146548988_146550437
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124676	chr4	+	958	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33226	-4077	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	258.749557165483	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146500253	146550672	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_146500544_146502756_146502850_146508052_146508139_146533486_146533556_146547961_146548020_146548860_146548988_146550437
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124682	chr4	-	210	1	Intergenic	novelGene_3869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCATAAGTCAAAAAGACCAG	NA	False	NA	NA	False	NA	NA	NA	146511108	146510898	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_146510900_146511100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124691	chr4	+	3839	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16642	-852	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	291.29827926028	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCCATCCACTACGGC	1852	False	NA	NA	False	NA	NA	NA	146516837	146553897	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_146516986_146533486_146533533_146547961_146548020_146548860_146548988_146550437
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124702	chr4	+	177	1	Intergenic	novelGene_3870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTCTCAGGAGGCAAGTA	NA	False	NA	NA	False	NA	NA	NA	146556531	146556708	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_146556500_146556700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124712	chr4	-	186	1	Intergenic	novelGene_3871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAAAATATTCTGGAACT	NA	False	NA	NA	False	NA	NA	NA	146571838	146571652	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_146571700_146571800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124734	chr4	+	836	4	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-12	3413	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	190.482428469283	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATATTCTGATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	146586471	146627265	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_146586602_146616526_146616611_146619877_146620005_146626770
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124765	chr4	-	185	1	Intergenic	novelGene_3872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAATAAAGAGAGCT	8933	False	NA	NA	False	NA	NA	NA	146896030	146895845	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_146895800_146896000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124767	chr4	-	2774	6	NNC	ENSMUSG00000045699.5	novel	1296	4	NA	NA	0	63800	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	18.9567929777165	25	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	146994047	146912352	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_-_146913241_146913493_146914904_146917069_146917197_146921032_146921137_146983728_146983809_146993882
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124791	chr4	-	184	1	Intergenic	novelGene_3873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAAAATATTCTGGAACT	NA	False	NA	NA	False	NA	NA	NA	147298264	147298080	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_147298100_147298300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124830	chr4	+	2847	4	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	4864	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	75.7935793234933	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGCTTTGGTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	147394994	147418188	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_147395147_147409230_147409335_147413438_147413566_147415724
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124858	chr4	+	204	1	Intergenic	novelGene_3874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTGGACAAGATTCAAG	NA	False	NA	NA	False	NA	NA	NA	147473242	147473446	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_147473200_147473400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124907	chr4	+	182	1	Intergenic	novelGene_3875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATGTGATTGGGTAAGA	NA	False	NA	NA	False	NA	NA	NA	147683197	147683379	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_147683200_147683400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124910	chr4	-	2623	5	FSM	ENSMUSG00000066000.13	ENSMUST00000037565.14	2558	5	-57	-8	-52	6	multi-exon	FALSE	canonical	3	23	junction_4	194.56666595283	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTTTAGTTTGC	NA	False	NA	1	True	AATAAA	-24	NA	147727022	147696387	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147726820
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124923	chr4	-	2616	5	FSM	ENSMUSG00000066000.13	ENSMUST00000105720.8	2594	5	-21	-1	-21	1	multi-exon	FALSE	canonical	3	24	junction_4	194.219592214586	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACTTGCTTGTTTTTAG	NA	False	NA	-4	True	AATAAA	-19	NA	147726991	147696392	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147726791
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124939	chr4	-	2622	5	NNC	ENSMUSG00000066000.13	novel	2594	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_4	198.757861479741	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTTGCTTGTTTTTA	NA	False	NA	-5	True	AATAAA	-18	NA	147726968	147696393	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147726761
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124946	chr4	-	2582	5	NNC	ENSMUSG00000066000.13	novel	2594	5	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	232.809337226839	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTTGCTTGTTTTTA	NA	False	NA	-5	True	AATAAA	-18	NA	147726976	147696393	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_-_147698506_147699736_147699864_147702873_147702956_147725357_147725463_147726820
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124956	chr4	-	2692	6	NNC	ENSMUSG00000066000.13	novel	2594	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	226.990748710162	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTTGCTTGTTTTTA	NA	False	NA	-5	True	AATAAA	-18	NA	147726969	147696393	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_-_147698506_147699736_147699864_147702873_147702956_147706414_147706543_147725368_147725463_147726820
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124971	chr4	-	185	1	Intergenic	novelGene_3876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAATAAAGAGAGCT	NA	False	NA	NA	False	NA	NA	NA	147741750	147741565	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_147741600_147741800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124983	chr4	-	2677	5	NNC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	381	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	100.961316849574	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	9904	False	NA	NA	False	NA	NA	NA	147893864	147838430	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_-_147840693_147842158_147842286_147845677_147845783_147891546_147891641_147893775
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000124988	chr4	-	2630	5	NNC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	381	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_3	104.533487457369	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	9904	False	NA	NA	False	NA	NA	NA	147893864	147838430	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_-_147840693_147842158_147842286_147845677_147845736_147891546_147891641_147893775
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125002	chr4	+	201	1	Intergenic	novelGene_3877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGACATTCTTAGTCAT	9523	False	NA	NA	False	NA	NA	NA	147878386	147878587	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_147878400_147878600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125004	chr4	+	224	1	Intergenic	novelGene_3878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAATCTGCAAAGGTTA	NA	False	NA	NA	False	NA	NA	NA	147900568	147900792	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_147900600_147900800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125017	chr4	-	1932	9	FSM	ENSMUSG00000029022.19	ENSMUST00000156374.9	1909	9	-23	0	1	0	multi-exon	FALSE	canonical	3	219	junction_8	23.8995292840675	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	-12	True	AATAAA	-16	NA	147952979	147945247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125032	chr4	-	4446	19	FSM	ENSMUSG00000029020.14	ENSMUST00000105716.9	4241	19	-203	-2	-186	2	multi-exon	TRUE	canonical	2	51	junction_4	9.87139526330723	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCTCTGCCTGCAGTA	NA	False	NA	-2	True	AATAAA	-21	NA	147989347	147958053	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398_147964555_147966473_147966695_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147970032_147970137_147970206_147970727_147970882_147971662_147971771_147971871_147971981_147973076_147973202_147974570_147974734_147979019_147979156_147982920_147983100_147987811_147987955_147989114
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125054	chr4	+	2774	3	FSM	ENSMUSG00000044496.7	ENSMUST00000103232.2	2731	3	-38	-5	-38	5	multi-exon	FALSE	canonical	3	503	junction_1	12.5	697	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCTGTGTGTGGTTAAA	NA	False	NA	26	True	AATAAA	-21	NA	148025313	148031776	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_148026515_148029064_148029919_148031057
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125086	chr4	-	4014	5	FSM	ENSMUSG00000029007.9	ENSMUST00000030865.9	3996	5	-18	0	-18	0	multi-exon	FALSE	canonical	3	1081	junction_4	44.285296657017	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTGCTGTGTGATTAAT	NA	False	NA	-3	True	AATAAA	-18	NA	148172506	148161517	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172373
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125103	chr4	+	214	1	Intergenic	novelGene_3879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCGGGACCAGGCCGAG	NA	False	NA	NA	False	NA	NA	NA	148177938	148178152	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_148177900_148178200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125111	chr4	+	1225	8	FSM	ENSMUSG00000029003.12	ENSMUST00000030860.9	1535	8	310	0	-232	0	multi-exon	FALSE	canonical	3	623	junction_4	29.3730405338651	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATGAACATGTGTATCG	NA	False	NA	30	True	AATAAA	-38	NA	148224948	148230156	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110_148229185_148229560_148229654_148229828
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125125	chr4	-	1173	6	FSM	ENSMUSG00000055401.15	ENSMUST00000168503.8	1240	6	-4	71	1	0	multi-exon	FALSE	canonical	3	230	junction_5	226.118552976088	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTTGAGGGCTTACA	NA	False	NA	-17	True	AATAAA	-17	NA	148236596	148230243	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236469
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125130	chr4	-	1113	6	FSM	ENSMUSG00000055401.15	ENSMUST00000056965.12	1163	6	51	-1	51	0	multi-exon	FALSE	canonical	3	138	junction_5	262.901958912443	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTTGAGGGCTTACA	NA	False	NA	-17	True	AATAAA	-17	NA	148236465	148230243	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236398
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125134	chr4	-	1143	6	FSM	ENSMUSG00000055401.15	ENSMUST00000134261.2	811	6	-1	-331	-1	0	multi-exon	FALSE	canonical	3	174	junction_5	248.50786707869	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTTGAGGGCTTACA	NA	False	NA	-17	True	AATAAA	-17	NA	148236383	148230243	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236286
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125158	chr4	+	1280	6	FSM	ENSMUSG00000041556.9	ENSMUST00000047951.9	1288	6	1	7	1	-7	multi-exon	FALSE	canonical	3	50	junction_2	6.34350061086148	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGGACGCACAGATGAAT	NA	False	NA	16	True	NA	NA	NA	148245078	148250874	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_148245169_148248531_148248913_148249282_148249413_148249484_148249581_148250100_148250231_148250421
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125165	chr4	+	189	1	Intergenic	novelGene_3880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGAAATAGTCACATGAT	NA	False	NA	NA	False	NA	NA	NA	148511293	148511482	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_148511300_148511500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125175	chr4	-	2981	2	FSM	ENSMUSG00000047719.3	ENSMUST00000051633.3	2992	2	11	0	1	0	multi-exon	FALSE	canonical	3	93	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGTGGCTTTGTTTCTT	NA	False	NA	0	True	ATTAAA	-16	NA	148529217	148518951	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_148521100_148528384
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125188	chr4	+	8588	58	FSM	ENSMUSG00000028991.16	ENSMUST00000103221.10	8564	58	-24	0	-24	0	multi-exon	TRUE	canonical	2	74	junction_19	24.6853638803358	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTATGACTGGCTT	NA	False	NA	34	True	AATAAA	-23	NA	148533043	148642140	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_148533145_148536713_148536890_148537478_148537588_148538214_148538448_148539008_148539210_148540441_148540577_148543083_148543360_148543440_148543550_148547243_148547431_148548148_148548278_148548759_148549005_148549403_148549620_148550347_148550554_148552706_148552830_148553444_148553535_148553823_148553917_148554678_148554814_148555028_148555159_148556370_148556622_148565321_148565409_148568011_148568180_148568766_148568880_148569082_148569246_148570505_148570599_148571232_148571380_148573932_148574076_148575791_148575955_148576077_148576224_148596227_148596304_148599282_148599423_148605748_148605850_148608915_148609032_148610180_148610259_148610454_148610563_148614938_148615065_148615134_148615267_148618318_148618435_148619364_148619483_148620967_148621217_148621818_148621920_148622319_148622417_148622732_148622832_148622919_148623043_148623184_148623368_148624437_148624573_148624741_148624917_148628875_148629012_148629966_148630115_148630854_148630978_148632060_148632144_148633824_148633898_148634247_148634323_148634544_148634681_148635415_148635482_148637168_148637250_148637487_148637569_148640723_148640830_148641301
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125191	chr4	+	1039	5	FSM	ENSMUSG00000028991.16	ENSMUST00000057580.8	1003	5	-36	0	-22	0	multi-exon	FALSE	canonical	3	142	junction_1	19.0656759649376	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGGCCTCTGACTATGG	NA	False	NA	16	True	AATAAA	-22	NA	148533045	148539430	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_148533145_148536713_148536890_148537478_148537588_148538214_148538448_148539008
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125204	chr4	+	2793	25	FSM	ENSMUSG00000017264.17	ENSMUST00000017408.14	2790	25	0	-3	0	3	multi-exon	TRUE	canonical	3	466	junction_4	49.4747234847138	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCTTGGTTGGTTGGTTG	NA	False	NA	NA	False	ATTAAA	-25	NA	148642885	148666861	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125219	chr4	+	2682	24	FSM	ENSMUSG00000017264.17	ENSMUST00000076022.7	2682	24	-4	4	3	4	multi-exon	FALSE	canonical	3	22	junction_18	124.035058157659	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGATGGTTCTTGGTTGG	NA	False	NA	NA	False	ATTAAA	-18	NA	148642914	148666854	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125237	chr4	-	190	1	Intergenic	novelGene_3881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAAAAGAAGCCGG	NA	False	NA	NA	False	NA	NA	NA	148675029	148674839	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_148674800_148675000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125245	chr4	-	190	2	Intergenic	novelGene_3882	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTTTTAAAAAGAA	8861	False	NA	NA	False	NA	NA	NA	148714496	148674844	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_148675009_148714470
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125263	chr4	+	1401	6	ISM	ENSMUSG00000006442.11	ENSMUST00000006611.9	1338	7	4	14	4	-14	intron_retention	FALSE	canonical	3	3092	junction_5	102.267101259398	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGACCTCTGACCTTTT	8720	False	NA	14	True	AATACA	-22	NA	148675963	148679062	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_+_148676244_148676500_148676622_148676938_148677032_148677744_148677899_148678224_148678455_148678539
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125279	chr4	-	2171	7	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	0	3	intron_retention	FALSE	canonical	3	409	junction_1	257.510949066033	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTCATCACCTGTCATG	NA	False	NA	1	True	AATAAA	-29	NA	148711222	148701169	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_148701302_148702022_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125301	chr4	-	1191	8	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	168	junction_2	371.00008251278	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAAGTCAAATGGATTCA	NA	False	NA	-11	True	AATAAA	-17	NA	148711222	148701181	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_148701302_148702022_148702163_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125308	chr4	-	1199	8	FSM	ENSMUSG00000041459.16	ENSMUST00000045180.14	2006	8	0	807	0	0	multi-exon	FALSE	canonical	3	205	junction_2	361.175800938647	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAAGTCAAATGGATTC	NA	False	NA	-12	True	AATAAA	-16	NA	148711222	148701182	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_148701302_148702022_148702163_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125312	chr4	-	1783	7	FSM	ENSMUSG00000041459.16	ENSMUST00000165113.8	6495	7	231	4481	0	0	multi-exon	FALSE	canonical	3	205	junction_1	333.080404040159	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTTGTTTTGCAGCC	NA	False	NA	NA	False	AATAAA	-17	NA	148711222	148701319	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_148702163_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125324	chr4	-	1772	7	FSM	ENSMUSG00000041459.16	ENSMUST00000105699.8	1904	7	-7	139	0	-2	multi-exon	FALSE	canonical	3	168	junction_1	346.808024064547	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTCTTTGTTTTGCAG	NA	False	NA	NA	False	AATAAA	-15	NA	148711222	148701321	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_148702163_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125340	chr4	-	176	1	Intergenic	novelGene_3883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATTGTTTAAAATT	7414	False	NA	NA	False	NA	NA	NA	148715943	148715767	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_148715800_148715900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125342	chr4	-	1501	11	Fusion	ENSMUSG00000086606.2_ENSMUSG00000028975.17	novel	2006	9	NA	NA	4	5	multi-exon	FALSE	canonical	3	45	junction_1	151.923796687682	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCGTTGTGGACAAAACCC	NA	False	NA	1	True	AATAAA	-19	NA	149184281	149031943	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr4_-_149032363_149033223_149033365_149046004_149046252_149047898_149047991_149050678_149050777_149051980_149052084_149055006_149055093_149068493_149068623_149126177_149126263_149160476_149160525_149184228
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125348	chr4	-	1979	9	FSM	ENSMUSG00000028975.17	ENSMUST00000103217.11	2006	9	33	-6	-15	6	multi-exon	FALSE	canonical	3	391	junction_6	18.1757909043871	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGACCTCGTCTGCTAG	NA	False	NA	-6	True	AATAAA	-26	NA	149184300	149044985	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_149046252_149047898_149047991_149050678_149050777_149051980_149052084_149055006_149055093_149068493_149068623_149126177_149126263_149160476_149160525_149184228
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125350	chr4	-	1863	8	NIC	ENSMUSG00000028975.17	novel	2006	9	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	146.864785793336	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGCTCTGACCTCGTC	NA	False	NA	-12	True	AATAAA	-20	NA	149184276	149044991	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_149046252_149047898_149047991_149050678_149050777_149051980_149052084_149068493_149068623_149126177_149126263_149160476_149160525_149184228
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125362	chr4	+	194	1	Intergenic	novelGene_3884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGCATGTATTTACAAACA	NA	False	NA	NA	False	NA	NA	NA	149077176	149077370	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_149077200_149077400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125370	chr4	+	175	1	Intergenic	novelGene_3885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATTCTTTTTACACTGA	2549	False	NA	NA	False	NA	NA	NA	149152543	149152718	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_149152500_149152700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125379	chr4	+	188	1	Intergenic	novelGene_3886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCCTAAGGAATGGAATGC	NA	False	NA	NA	False	NA	NA	NA	149177114	149177302	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_149177100_149177300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125384	chr4	+	2435	6	FSM	ENSMUSG00000028974.14	ENSMUST00000030816.4	2457	6	24	-2	24	2	multi-exon	FALSE	canonical	3	30	junction_2	2.13541565040626	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCCTTTGTTTGTCAG	NA	False	NA	8	True	AATAAA	-18	NA	149188626	149205106	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_149188844_149190608_149190771_149192225_149192369_149201864_149202055_149202228_149202381_149203535
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125389	chr4	-	179	1	Intergenic	novelGene_3887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAGATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	149197424	149197245	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_149197200_149197400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125395	chr4	+	143	1	Intergenic	novelGene_3888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTTTTAAAATGAAATTA	NA	False	NA	NA	False	NA	NA	NA	149205432	149205575	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_149205400_149205600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125402	chr4	-	831	5	FSM	ENSMUSG00000073705.11	ENSMUST00000030813.10	1110	5	47	232	-5	110	multi-exon	FALSE	canonical	3	344	junction_3	40.8923892674419	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCTGCTGTGGCTTCA	NA	False	NA	-34	True	AATAAA	-19	NA	149222039	149212886	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_149213386_149214609_149214677_149216095_149216130_149216715_149216840_149221932
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125408	chr4	-	2206	13	FSM	ENSMUSG00000028961.16	ENSMUST00000084124.7	2218	13	11	1	11	-1	multi-exon	FALSE	canonical	1	98	junction_7	73.9915066447194	219	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCTTTGTTTCTTCTC	NA	False	NA	-9	True	AATAAA	-15	NA	149251153	149234448	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_149235221_149235309_149235433_149235569_149235670_149238320_149238455_149238622_149238754_149241063_149241254_149242417_149242553_149244515_149244586_149245291_149245411_149246085_149246152_149249506_149249687_149250463_149250540_149251043
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125421	chr4	+	200	1	Intergenic	novelGene_3889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGCTTTCTGGGCTGGA	NA	False	NA	NA	False	NA	NA	NA	149273342	149273542	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_149273300_149273500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125433	chr4	+	200	1	Intergenic	novelGene_3890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTACTGACTCATTCTC	NA	False	NA	8	True	NA	NA	NA	149293242	149293442	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_149293200_149293400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125445	chr4	+	184	1	Intergenic	novelGene_3891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACACATTTGCCAGGCGG	NA	False	NA	NA	False	NA	NA	NA	149295964	149296148	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_149296000_149296100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125452	chr4	-	7101	21	FSM	ENSMUSG00000063077.16	ENSMUST00000030806.6	6991	21	-110	0	-40	0	multi-exon	FALSE	canonical	3	40	junction_1	18.6480561989715	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGGCATGATCTTTAAG	7199	False	NA	NA	False	AATAAA	-16	NA	149392190	149318190	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_149322941_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342461_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125455	chr4	+	177	1	Intergenic	novelGene_3892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGTAACTTCCTAA	4713	False	NA	NA	False	NA	NA	NA	149328700	149328877	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_149328700_149328900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125460	chr4	+	178	1	Intergenic	novelGene_3893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAGCAAATTCTCA	7662	False	NA	NA	False	NA	NA	NA	149355546	149355724	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_149355500_149355700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125462	chr4	+	209	1	Intergenic	novelGene_3894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATAGCCTTTATCTATTT	NA	False	NA	NA	False	NA	NA	NA	149372966	149373175	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_149373000_149373200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125465	chr4	+	202	1	Intergenic	novelGene_3895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCATGCCACCACACCTGG	NA	False	NA	NA	False	NA	NA	NA	149378363	149378565	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_149378400_149378600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125484	chr4	-	5511	27	FSM	ENSMUSG00000028960.21	ENSMUST00000103212.10	5626	27	115	0	-3	0	multi-exon	TRUE	canonical	3	203	junction_22	27.7325828917206	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTGTGAGTCGTCTTT	NA	False	NA	-2	True	AATAAA	-23	NA	149511091	149412872	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_149414195_149414647_149414795_149415779_149415955_149419568_149419761_149421841_149421977_149427335_149427481_149428971_149429099_149432383_149432620_149435114_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081_149442281_149443653_149443768_149444734_149444834_149444916_149445034_149445740_149445798_149449910_149449995_149452757_149452873_149455615_149455717_149457284_149457427_149465639_149465869_149468194_149468340_149469581_149469670_149471537_149471674_149483055_149483243_149510338
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125491	chr4	-	182	1	Intergenic	novelGene_3896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTGGTTGGTTTTTTT	9505	False	NA	0	True	NA	NA	NA	149417115	149416933	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_149416900_149417100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125501	chr4	+	606	1	FSM	ENSMUSG00000070572.8	ENSMUST00000117987.2	378	1	-39	-189	-39	189	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGTAGCTACTTCCTAA	1875	False	NA	NA	False	ATTAAA	-35	NA	149541746	149542352	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_149541700_149542400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125515	chr4	+	173	1	Antisense	novelGene_ENSMUSG00000028992.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAACAACAACAAA	649	False	NA	NA	False	NA	NA	NA	149553840	149554013	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr4_+_149553800_149554000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125522	chr4	+	205	1	Intergenic	novelGene_3897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCCTCCCCCCCCAAAAAA	2534	False	NA	NA	False	NA	NA	NA	149555725	149555930	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_149555700_149555900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125525	chr4	+	1285	8	NIC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_1	51.1324809905103	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTGTCTATGAAAATTCA	NA	False	NA	27	True	NA	NA	NA	149569698	149581125	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_149569731_149570314_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125532	chr4	+	1846	7	FSM	ENSMUSG00000028990.14	ENSMUST00000030842.8	1817	7	-29	0	25	0	multi-exon	FALSE	canonical	3	163	junction_3	14.9517743280039	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTGTCTATGAAAATTCA	NA	False	NA	27	True	NA	NA	NA	149569721	149581125	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125539	chr4	-	179	1	Intergenic	novelGene_3898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATTTAAATGCACT	NA	False	NA	NA	False	NA	NA	NA	149598331	149598152	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_149598200_149598300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125580	chr4	+	188	1	Intergenic	novelGene_3899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCCATGCAAGCCCAAAG	3848	False	NA	NA	False	NA	NA	NA	149706762	149706950	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_149706800_149707000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125583	chr4	+	1500	1	ISM	ENSMUSG00000039953.14	ENSMUST00000105691.8	4459	18	60932	0	20270	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTGGGGTCCATTCT	NA	False	NA	24	True	AATAAA	-19	NA	149731856	149733356	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_+_149731900_149733400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125593	chr4	+	177	1	Intergenic	novelGene_3900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATAGATCTTAAATG	NA	False	NA	NA	False	NA	NA	NA	149791437	149791614	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_149791400_149791600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125599	chr4	-	3724	11	FSM	ENSMUSG00000044700.16	ENSMUST00000105687.9	3697	11	-27	0	-27	0	multi-exon	FALSE	canonical	3	194	junction_3	67.7469556511582	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGCTGTGTTTTCTTTGT	NA	False	NA	-1	True	AATAAA	-25	NA	149822528	149799831	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_149801535_149802476_149802615_149803107_149803402_149803968_149804041_149806663_149806897_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125614	chr4	-	3638	6	FSM	ENSMUSG00000044700.16	ENSMUST00000103208.2	3620	6	-17	-1	-17	1	multi-exon	FALSE	canonical	3	307	junction_5	21.9508541975022	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGTCTTTTTTTCTTTCA	NA	False	NA	-7	True	AATAAA	-40	NA	149822518	149809319	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125623	chr4	-	1911	7	FSM	ENSMUSG00000028982.10	ENSMUST00000105686.3	1887	7	-19	-5	-19	5	multi-exon	FALSE	canonical	3	394	junction_5	32.4623713791146	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCCTGCATTTATCCT	NA	False	NA	NA	False	AATAAA	-25	NA	149858753	149828487	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_149829395_149833505_149833787_149836860_149836928_149838255_149838357_149840531_149840610_149846823_149847004_149858456
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125635	chr4	-	3092	3	FSM	ENSMUSG00000039911.14	ENSMUST00000038562.9	3092	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	6.5	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCCGAGTCCTTTCGTGC	NA	False	NA	3	True	AATAAA	-24	NA	150039500	149980739	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_149982799_149990872_149991715_150039309
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125656	chr4	+	3263	1	FSM	ENSMUSG00000102813.2	ENSMUST00000194216.2	2459	1	1	-805	1	805	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTATCAGTGCATTTGTA	4086	False	NA	8	True	AATAAA	-21	NA	150152996	150156259	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_150153000_150156300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125666	chr4	+	1790	12	FSM	ENSMUSG00000063524.14	ENSMUST00000080926.13	2027	12	237	0	-51	0	multi-exon	FALSE	canonical	3	2891	junction_9	3966.2265098293	2050	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGCATCTCATTTGTG	NA	False	NA	5	True	AATAAA	-22	NA	150321645	150333336	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125691	chr4	+	198	1	Intergenic	novelGene_3901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	697	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATTAGGGGTGTGGGAT	5033	False	NA	NA	False	NA	NA	NA	150578548	150578746	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_150578500_150578700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125707	chr4	+	227	1	Intergenic	novelGene_3902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTATTTTTTAAACTTG	5306	False	NA	NA	False	AAAAAG	-21	NA	150683445	150683672	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_150683400_150683700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125714	chr4	+	3048	4	FSM	ENSMUSG00000028967.11	ENSMUST00000030811.2	3043	4	-3	-2	-3	2	multi-exon	FALSE	canonical	3	303	junction_2	19.3275853524323	296	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTGTCTTGTCTAAACT	3778	False	NA	NA	False	AATAAA	-30	NA	150939526	150953346	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_150939729_150949531_150949727_150949820_150949898_150950772
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125729	chr4	-	874	7	FSM	ENSMUSG00000028964.15	ENSMUST00000030805.14	908	7	35	-1	-23	1	multi-exon	FALSE	canonical	3	5402	junction_3	199.85446093484	271	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGTCTGGGGTCTTTT	NA	False	NA	0	True	AATAAA	-27	NA	150994348	150981588	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150994239
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125751	chr4	-	2142	5	FSM	ENSMUSG00000028955.4	ENSMUST00000030797.4	2120	5	-26	4	-16	-4	multi-exon	FALSE	canonical	3	150	junction_4	30.2685893295343	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTGTCGTGTTTCTTGG	NA	False	NA	-1	True	AATAAA	-18	NA	151142436	151131760	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_151133504_151134451_151134504_151135373_151135533_151140618_151140701_151142330
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125759	chr4	-	3076	6	ISM	ENSMUSG00000014592.22	ENSMUST00000049790.14	8423	24	275262	83540	275166	-56942	internal_fragment	FALSE	canonical	1	4	junction_3	4.12795348811006	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCCCTGAGTGCCTTGCT	NA	False	NA	NA	False	AATAAA	-36	NA	151670941	151227522	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_-_151230026_151232866_151233008_151248272_151248427_151374488_151374561_151537740_151537877_151670871
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125770	chr4	-	631	4	FSM	ENSMUSG00000014592.22	ENSMUST00000185034.8	2198	4	-69	1636	-27	20	multi-exon	FALSE	canonical	3	969	junction_2	33.2565782966318	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAGTTTAATGAGTACAT	NA	False	NA	-3	True	AATAAA	-30	NA	151946230	151876666	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_151876960_151914874_151914994_151920270_151920341_151946081
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125779	chr4	+	3001	16	FSM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	-27	177	-27	-177	multi-exon	FALSE	canonical	3	755	junction_7	69.5258864660415	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTCCATCTGTGTGTG	9043	False	NA	23	True	NA	NA	NA	152018120	152066417	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125790	chr4	-	1108	4	FSM	ENSMUSG00000039759.11	ENSMUST00000036680.8	1124	4	17	-1	0	1	multi-exon	FALSE	canonical	3	153	junction_2	10.8730042868667	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGCTGTCACTCGGTTA	NA	False	NA	-2	True	AATAAA	-17	NA	152073437	152067094	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_152067810_152068091_152068194_152070125_152070319_152073339
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125798	chr4	-	1004	3	FSM	ENSMUSG00000039759.11	ENSMUST00000105665.3	832	3	-10	-162	0	-1	multi-exon	FALSE	canonical	3	60	junction_1	59.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGGCTGTCACTCGGT	NA	False	NA	-4	True	AATAAA	-15	NA	152073437	152067096	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_152067810_152070125_152070319_152073339
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125803	chr4	-	3180	4	FSM	ENSMUSG00000047777.10	ENSMUST00000055688.10	3205	4	28	-3	28	3	multi-exon	FALSE	canonical	3	138	junction_1	6.59966329107444	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGCCTCCTTAGGTGT	NA	False	NA	-2	True	AATAAA	-18	NA	152080687	152074086	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_152076237_152076526_152077050_152078446_152078549_152080282
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125810	chr4	+	181	1	Intergenic	novelGene_3903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCACCACTGGTCTCTAGC	8078	False	NA	NA	False	NA	NA	NA	152084338	152084519	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_152084300_152084500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125814	chr4	+	3886	4	FSM	ENSMUSG00000073700.4	ENSMUST00000097773.4	3986	4	100	0	100	0	multi-exon	FALSE	canonical	3	100	junction_1	3.39934634239519	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGTGTCATGGCCTTC	6498	False	NA	13	True	AATAAA	-13	NA	152093359	152102137	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_152094421_152096756_152097163_152098763_152098837_152099791
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125824	chr4	-	2223	11	FSM	ENSMUSG00000028952.13	ENSMUST00000066715.11	2218	11	-8	3	2	-1	multi-exon	FALSE	canonical	3	24	junction_10	11.2782977438973	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTCAGTGTCTGTTCCT	8671	False	NA	-4	True	AATAAA	-15	NA	152112126	152104233	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_152104578_152104646_152104736_152105000_152105166_152105235_152105373_152105745_152105901_152105998_152106086_152106483_152106577_152107152_152107265_152110234_152110477_152110844_152111517_152111999
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125844	chr4	+	3732	12	NNC	ENSMUSG00000028948.17	novel	3722	12	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_4	187.855052264125	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGAATACAGCTCTTC	7356	False	NA	NA	False	NA	NA	NA	152123794	152144499	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152130401_152130493_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152142797
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125853	chr4	+	3844	22	FSM	ENSMUSG00000039713.18	ENSMUST00000118648.8	3818	22	-18	-8	-18	-2	multi-exon	FALSE	canonical	3	104	junction_1	15.0256017344728	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCATGCGCTTCTGGAAC	NA	False	NA	36	True	TATAAA	-25	NA	152171296	152199855	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125876	chr4	+	179	1	Intergenic	novelGene_3904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATACAGAATCCAGCAGT	8841	False	NA	NA	False	NA	NA	NA	152250859	152251038	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_152250900_152251000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125882	chr4	+	210	1	Intergenic	novelGene_3905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGGCTTCAAAGGGCAAG	NA	False	NA	NA	False	NA	NA	NA	152252178	152252388	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_152252200_152252400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125888	chr4	+	1416	9	FSM	ENSMUSG00000028937.15	ENSMUST00000075363.10	1457	9	45	-4	45	1	multi-exon	FALSE	canonical	3	360	junction_1	55.2466062306093	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTAGGTGGTCATTTGTCT	NA	False	NA	21	True	AATAAA	-26	NA	152262635	152356313	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_152262798_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125915	chr4	+	2216	4	FSM	ENSMUSG00000028936.16	ENSMUST00000139685.8	2051	4	-159	-6	-34	6	multi-exon	FALSE	canonical	3	4243	junction_1	691.49805173663	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCAAGGCTTTTTTTCT	NA	False	NA	35	True	ATTAAA	-25	NA	152410164	152418534	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_152410353_152411937_152412043_152414460_152414586_152416736
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125931	chr4	+	2026	3	NIC	ENSMUSG00000028936.16	novel	474	4	NA	NA	17	0	intron_retention	FALSE	canonical	3	5596	junction_2	103	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	False	NA	16	True	AATAAA	-15	NA	152410342	152416937	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_152412043_152414460_152414586_152416736
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125940	chr4	+	226	1	Intergenic	novelGene_3906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTAGATCTGCAGCCCA	NA	False	NA	NA	False	NA	NA	NA	152525769	152525995	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_152525800_152526000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125946	chr4	+	4929	30	NNC	ENSMUSG00000039577.18	novel	4583	29	NA	NA	-421	1	at_least_one_novel_splicesite	TRUE	canonical	3	19	junction_14	7.38929392329869	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTCTTCTGATGTTTTT	NA	False	NA	NA	False	AATGAA	-20	NA	152562177	152647641	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_152562377_152568816_152568998_152573198_152573352_152581105_152581279_152582633_152582699_152583388_152583545_152587330_152587462_152590817_152591000_152591813_152591941_152602549_152602733_152608698_152608826_152620366_152620429_152621639_152621757_152622231_152622381_152622476_152622669_152623279_152623468_152628755_152628917_152631402_152631584_152636260_152636387_152638978_152639185_152639929_152640157_152640675_152640863_152641448_152641533_152643784_152643942_152644134_152644221_152644720_152644807_152645634_152645807_152646030_152646211_152646462_152646607_152647094
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125955	chr4	+	176	1	Intergenic	novelGene_3907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAAACTGTTGTCCT	NA	False	NA	NA	False	NA	NA	NA	153175300	153175476	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_153175300_153175500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125959	chr4	-	184	1	Intergenic	novelGene_3908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTGGCTTAAACATTGC	NA	False	NA	NA	False	NA	NA	NA	153819191	153819007	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_153819000_153819200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125962	chr4	+	1105	4	FSM	ENSMUSG00000047613.11	ENSMUST00000058393.9	1098	4	-7	0	-7	0	multi-exon	FALSE	canonical	3	743	junction_1	42.5519290592879	213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGTTCACAAAAGTGT	NA	False	NA	NA	False	AATAAA	-29	NA	154041686	154046382	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_154041780_154044205_154044320_154044987_154045450_154045946
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125982	chr4	-	2016	7	FSM	ENSMUSG00000029027.10	ENSMUST00000030893.3	2093	7	77	0	2	0	multi-exon	FALSE	canonical	3	25	junction_6	5.79271573232759	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGTCAAAATTTTTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	154059506	154048905	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_154050071_154053549_154053651_154054397_154054569_154056037_154056118_154057236_154057426_154059025_154059153_154059323
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000125997	chr4	+	3373	8	NNC	ENSMUSG00000029028.15	novel	3468	7	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_7	131.481511077041	329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGCATCAGCAGCCTTA	NA	False	NA	16	True	AATAAA	-18	NA	154096236	154105970	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087_154104449_154104494
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126022	chr4	-	1767	4	FSM	ENSMUSG00000029030.15	ENSMUST00000030896.15	1724	4	-39	-4	-39	4	multi-exon	FALSE	canonical	3	665	junction_1	33.0891052899423	361	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTCCTTTTTGAAGTTA	NA	False	NA	1	True	AGTAAA	-20	NA	154245162	154241937	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_154243023_154243725_154243880_154244541_154244719_154244811
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126055	chr4	+	2575	19	FSM	ENSMUSG00000029056.14	ENSMUST00000030931.11	2508	19	0	-67	0	0	multi-exon	FALSE	canonical	3	88	junction_8	27.1993100856585	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGAGAAGCAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	155048579	155065395	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056925_155057027_155059086_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063377_155063483_155063948_155064050_155064182_155064252_155064951
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126065	chr4	+	2531	19	NIC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_15	31.6079377434698	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGAGAAGCAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	155048589	155065395	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056925_155057027_155059086_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126076	chr4	+	1598	6	FSM	ENSMUSG00000029047.14	ENSMUST00000103180.4	1688	6	19	71	19	-71	multi-exon	FALSE	canonical	3	86	junction_5	7.62627038597505	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGTCTTCATCTTGGCC	NA	False	NA	NA	False	NA	NA	NA	155151491	155156819	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_155151632_155152279_155152361_155153119_155153527_155154843_155155020_155155097_155155234_155156161
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126085	chr4	-	1595	7	FSM	ENSMUSG00000029048.4	ENSMUST00000030914.4	1596	7	2	-1	0	1	multi-exon	FALSE	canonical	3	1097	junction_6	206.502959354635	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCGTCTACACGAGTCA	NA	False	NA	-12	True	ATTAAA	-23	NA	155170828	155158565	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155170661
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126095	chr4	-	1541	8	FSM	ENSMUSG00000029048.4	ENSMUST00000149796.2	1803	8	0	262	0	-262	multi-exon	FALSE	canonical	3	234	junction_7	582.015218259552	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGACACTTTCCTTTG	NA	False	NA	-22	True	TATAAA	-29	NA	155170828	155158828	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565_155167775_155170661
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126110	chr4	+	198	1	Intergenic	novelGene_3909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATAGTAACCTCACATGA	NA	False	NA	NA	False	NA	NA	NA	155163532	155163730	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_155163500_155163700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126118	chr4	-	5901	7	FSM	ENSMUSG00000029050.16	ENSMUST00000030917.6	5522	7	-487	108	-487	-108	multi-exon	FALSE	canonical	3	196	junction_6	29.4528813908287	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGGCATATTTATCTATT	NA	False	NA	-19	True	TATAAA	-40	NA	155307536	155238639	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_155241987_155242402_155242634_155243744_155244038_155244152_155244416_155245036_155245153_155245290_155245414_155306008
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126126	chr4	+	1060	4	FSM	ENSMUSG00000073684.14	ENSMUST00000178473.8	1076	4	16	0	-7	0	multi-exon	FALSE	canonical	3	113	junction_1	46.5784881201135	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTTCCTTCATAGCAA	NA	False	NA	8	True	NA	NA	NA	155334438	155341144	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_155334520_155334962_155335108_155335212_155335494_155340591
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126155	chr4	+	176	1	Intergenic	novelGene_3910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAAGGATATTT	3846	False	NA	NA	False	NA	NA	NA	155413133	155413309	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_155413100_155413300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126173	chr4	+	3197	12	FSM	ENSMUSG00000029064.16	ENSMUST00000030940.14	3131	12	-66	0	-57	0	multi-exon	FALSE	canonical	3	1763	junction_1	785.626496329864	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTGATGGTTATTT	NA	False	NA	27	True	AATAAA	-19	NA	155575760	155643726	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126185	chr4	+	3124	11	NIC	ENSMUSG00000029064.16	novel	3143	12	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	731	junction_10	1033.79389145032	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTGATGGTTATTT	NA	False	NA	27	True	AATAAA	-19	NA	155575787	155643726	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641924
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126194	chr4	+	3163	12	FSM	ENSMUSG00000029064.16	ENSMUST00000165335.8	3143	12	-20	0	-20	0	multi-exon	FALSE	canonical	3	731	junction_11	1088.68406424249	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTGATGGTTATTT	NA	False	NA	27	True	AATAAA	-19	NA	155575797	155643726	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641924
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126218	chr4	+	3060	12	FSM	ENSMUSG00000029063.17	ENSMUST00000105613.10	3152	12	92	0	-34	0	multi-exon	FALSE	canonical	3	675	junction_7	32.1412173266612	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGTAACAGCTTTCTTC	9664	False	NA	38	True	AATAAA	-24	NA	155648248	155675458	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126231	chr4	+	2877	11	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_9	206.213699835874	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTTAAGTAACAGCTTT	9685	False	NA	34	True	AATAAA	-20	NA	155648269	155675454	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155673066_155673150_155673784
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126237	chr4	+	2824	11	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	208.120662116956	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTTAAGTAACAGCTTT	9691	False	NA	34	True	AATAAA	-20	NA	155648275	155675454	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_155648437_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126270	chr4	+	2644	21	NIC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	-5	-3	combination_of_known_junctions	TRUE	canonical	3	57	junction_2	115.97994438695	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCTAACTTGCCTCG	3957	False	NA	20	True	ATTAAA	-25	NA	155709320	155734392	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_155709399_155709987_155710112_155710183_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126281	chr4	+	2694	20	FSM	ENSMUSG00000029062.15	ENSMUST00000105598.2	2673	20	-24	3	3	-3	multi-exon	FALSE	canonical	3	183	junction_2	84.1228490935262	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCTAACTTGCCTCG	3979	False	NA	20	True	ATTAAA	-25	NA	155709342	155734392	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_155709399_155709987_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126283	chr4	+	2569	20	NNC	ENSMUSG00000029062.15	novel	2595	20	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_8	112.769713621386	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCTAACTTGCCTCG	3982	False	NA	20	True	ATTAAA	-25	NA	155709345	155734392	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_155709399_155709987_155710112_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724236_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126321	chr4	-	3734	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-1	0	intron_retention	FALSE	canonical	3	119	junction_13	62.6646971262766	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7424	False	NA	-5	True	TATAAA	-13	NA	155753651	155739138	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126330	chr4	-	3640	19	FSM	ENSMUSG00000029060.18	ENSMUST00000103176.10	3642	19	2	0	1	0	multi-exon	FALSE	canonical	3	118	junction_12	57.2103817307469	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7422	False	NA	-5	True	TATAAA	-13	NA	155753653	155739138	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126343	chr4	-	221	1	Intergenic	novelGene_3911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTACATTTACTGGTCA	1182	False	NA	NA	False	TTTAAA	-10	NA	155773386	155773165	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_155773200_155773400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126362	chr4	+	1088	5	FSM	ENSMUSG00000029038.10	ENSMUST00000030905.9	1472	5	295	89	-29	-89	multi-exon	FALSE	canonical	3	1510	junction_4	100.903419169025	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTGTTGTTGGCCCTTT	NA	False	NA	28	True	AATAAA	-28	NA	155789551	155818247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_155789919_155799918_155800063_155815781_155815922_155816383_155816503_155817929
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126375	chr4	-	2432	16	FSM	ENSMUSG00000029036.19	ENSMUST00000030903.12	2413	16	-18	-1	-18	1	multi-exon	FALSE	canonical	3	684	junction_5	53.203759265676	440	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTTGATGGCTGAGGT	NA	False	NA	-8	True	AATAAA	-20	NA	155845568	155825096	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126394	chr4	-	189	1	Intergenic	novelGene_3912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTAAACTGGGCGTGG	NA	False	NA	NA	False	NA	NA	NA	155848370	155848181	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_155848200_155848400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126421	chr4	+	4585	10	NIC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	0	54	intron_retention	FALSE	canonical	3	294	junction_7	226.622272340976	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTGGGCTGTCATTC	4637	False	NA	22	True	AATAAA	-27	NA	155896957	155908814	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126422	chr4	+	4034	11	FSM	ENSMUSG00000029068.17	ENSMUST00000139066.8	4220	11	0	186	0	54	multi-exon	FALSE	canonical	3	294	junction_8	224.905068862398	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTGGGCTGTCATTC	4637	False	NA	22	True	AATAAA	-27	NA	155896957	155908814	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126449	chr4	+	837	4	FSM	ENSMUSG00000065990.13	ENSMUST00000084097.12	1159	4	273	49	5	20	multi-exon	FALSE	canonical	3	1785	junction_1	303.738191357111	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTGGCTTGGTGTGA	NA	False	NA	47	True	AATAAA	-37	NA	155916080	155917538	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_155916193_155916439_155916528_155916808_155917255_155917347
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126466	chr4	+	848	4	NIC	ENSMUSG00000065990.13	novel	1159	4	NA	NA	5	-9	combination_of_known_junctions	FALSE	canonical	3	91	junction_1	1100.13494121807	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTCAATTATTCTAGGC	NA	False	NA	18	True	AATAAA	-8	NA	155916130	155917509	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_155916193_155916349_155916528_155916808_155917255_155917347
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126491	chr4	+	3403	14	NIC	ENSMUSG00000029071.17	novel	3358	15	NA	NA	26	0	intron_retention	FALSE	canonical	3	113	junction_7	17.0970082853022	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTGTGGCTTGTTTCT	NA	False	NA	20	True	AAAAAG	-18	NA	155931884	155943760	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939258_155939342_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126500	chr4	-	2142	3	FSM	ENSMUSG00000029073.10	ENSMUST00000030950.8	2662	3	-9	529	-9	44	multi-exon	FALSE	canonical	3	76	junction_1	2.5	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGTGTCAGGTGCCTAA	NA	False	NA	1	True	AATAAA	-42	NA	155953906	155949708	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_155951343_155951569_155951795_155953623
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126538	chr4	-	1961	7	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	7	5	intron_retention	FALSE	canonical	3	293	junction_5	37.4985184892535	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGTTTATTACTTTAGC	9142	False	NA	NA	False	AATAAA	-19	NA	155976176	155973313	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_-_155973626_155973890_155974054_155974125_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976087
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126556	chr4	+	3925	24	FSM	ENSMUSG00000029033.17	ENSMUST00000105584.10	4365	24	441	-1	-9	0	multi-exon	TRUE	canonical	3	47	junction_10	11.8275254879557	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCCTGCTCATTGCCT	NA	False	NA	11	True	AATAAA	-16	NA	155976719	155991708	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_155976899_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155985460_155985473_155986131_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126562	chr4	+	200	1	Intergenic	novelGene_3913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACACCTTCTTTCTTTCTTT	777	False	NA	NA	False	NA	NA	NA	156015478	156015678	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_156015500_156015700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126572	chr4	+	1455	7	FSM	ENSMUSG00000023286.17	ENSMUST00000166489.8	3339	7	-6	1890	-6	0	multi-exon	FALSE	canonical	3	339	junction_1	277.674519696873	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGTGTGTGTTCTTAG	751	False	NA	37	True	TATAAA	-19	NA	156028281	156042171	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_156028608_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126574	chr4	+	1313	7	FSM	ENSMUSG00000023286.17	ENSMUST00000103175.8	1309	7	-1	-3	-1	0	multi-exon	FALSE	canonical	3	344	junction_1	275.8918870379	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGTGTGTGTTCTTAG	756	False	NA	37	True	TATAAA	-19	NA	156028286	156042171	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_156028471_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126579	chr4	+	1474	8	FSM	ENSMUSG00000023286.17	ENSMUST00000105583.9	1434	8	-37	-3	1	0	multi-exon	FALSE	canonical	3	230	junction_1	334.708584793838	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGTGTGTGTTCTTAG	758	False	NA	37	True	TATAAA	-19	NA	156028288	156042171	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_156028471_156030711_156030875_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126591	chr4	+	1608	8	FSM	ENSMUSG00000023286.17	ENSMUST00000024056.10	3483	8	-15	1890	4	0	multi-exon	FALSE	canonical	3	207	junction_1	340.827324764495	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGTGTGTGTTCTTAG	761	False	NA	37	True	TATAAA	-19	NA	156028291	156042171	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_156028608_156030711_156030875_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126616	chr4	+	263	1	Intergenic	novelGene_3914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTCTCAGAGAACCCTC	NA	False	NA	NA	False	TTTAAA	-2	NA	156054064	156054327	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_156054100_156054300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126623	chr4	+	188	1	Intergenic	novelGene_3915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCGGGCGTGGTGGCGCA	2167	False	NA	NA	False	NA	NA	NA	156062230	156062418	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_156062200_156062400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126651	chr4	+	222	1	Intergenic	novelGene_3916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACCATCATTAAAAGTAAG	NA	False	NA	NA	False	NA	NA	NA	156109178	156109400	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_156109200_156109400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126652	chr4	+	190	1	Intergenic	novelGene_3917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAGAACTTTGTTGA	1141	False	NA	NA	False	NA	NA	NA	156187324	156187514	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_156187300_156187500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126664	chr4	+	204	1	Intergenic	novelGene_3918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAGGAACGGATTTAAAA	4732	False	NA	NA	False	NA	NA	NA	156190915	156191119	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_156190900_156191100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126674	chr4	+	2534	10	FSM	ENSMUSG00000059939.14	ENSMUST00000072554.13	2528	10	-6	0	-6	0	multi-exon	FALSE	canonical	3	69	junction_5	55.1321644374276	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8249	False	NA	22	True	NA	NA	NA	156194432	156211722	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126719	chr4	+	186	1	Intergenic	novelGene_3919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGGCTTTGTTTATGCTG	NA	False	NA	NA	False	NA	NA	NA	156198636	156198822	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_156198600_156198800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126726	chr4	+	236	1	ISM	ENSMUSG00000059939.14	ENSMUST00000072554.13	2528	10	17048	0	13134	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8185	False	NA	22	True	NA	NA	NA	156211486	156211722	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_+_156211500_156211700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126730	chr4	-	7412	36	FSM	ENSMUSG00000041936.19	ENSMUST00000180572.2	6891	36	-31	-490	-31	2	multi-exon	FALSE	canonical	3	186	junction_32	92.1507460631763	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACTGTGTTTGTACTTGA	NA	False	NA	-19	True	AATAAA	-20	NA	156281976	156249744	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126743	chr4	-	181	1	Intergenic	novelGene_3920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTGGAAAAAAATAAC	NA	False	NA	NA	False	NA	NA	NA	156299685	156299504	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_156299500_156299700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126757	chr4	+	2778	19	FSM	ENSMUSG00000095567.9	ENSMUST00000179543.8	2785	19	-11	18	-11	-5	multi-exon	TRUE	canonical	0	0	junction_6	452.638591421947	2026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTATGTTTTCCTTTTAA	NA	False	NA	8	True	NA	NA	NA	156320455	156332055	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126783	chr4	+	2634	19	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	2	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	574.293597215282	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTGCTTTTCTTCTTA	NA	False	NA	-13	True	NA	NA	NA	156320468	156332034	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325879_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126790	chr4	+	2491	20	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	5	-180	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	569.363935333742	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTTTT	NA	False	NA	25	True	GATAAA	-20	NA	156320471	156331880	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325784_156325879_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126792	chr4	+	2440	19	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	5	-180	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	584.943418177464	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTTTT	NA	False	NA	25	True	GATAAA	-20	NA	156320471	156331880	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325916_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126822	chr4	+	2226	6	NIC	ENSMUSG00000095567.9	novel	2945	18	NA	NA	1507	78	intron_retention	FALSE	canonical	0	0	junction_2	764.447355937608	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTCTCTGTGTCTGCCAG	NA	False	NA	NA	False	NA	NA	NA	156323182	156327192	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156326258_156327022
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126829	chr4	+	2067	7	NIC	ENSMUSG00000095567.9	novel	2945	18	NA	NA	1507	78	intron_retention	FALSE	canonical	0	0	junction_2	715.772543014422	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTCTCTGTGTCTGCCAG	NA	False	NA	NA	False	NA	NA	NA	156323182	156327192	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325959_156326117_156326258_156327022
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126832	chr4	+	2839	5	NIC	ENSMUSG00000095567.9	novel	2945	18	NA	NA	1507	78	intron_retention	FALSE	canonical	3	1505	junction_3	262.842633528125	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTCTCTGTGTCTGCCAG	NA	False	NA	NA	False	NA	NA	NA	156323182	156327192	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_156323760_156323846_156324627_156324713_156324825_156325056_156326258_156327022
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126833	chr4	+	2991	5	ISM	ENSMUSG00000095567.9	ENSMUST00000179543.8	2785	19	2716	4881	1507	78	intron_retention	FALSE	canonical	0	0	junction_2	782.92416618725	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTCTCTGTGTCTGCCAG	NA	False	NA	NA	False	NA	NA	NA	156323182	156327192	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_+_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126834	chr4	+	2767	5	NIC	ENSMUSG00000095567.9	novel	2945	18	NA	NA	1507	78	intron_retention	FALSE	canonical	3	1505	junction_2	234.259471526767	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTCTCTGTGTCTGCCAG	NA	False	NA	NA	False	NA	NA	NA	156323182	156327192	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_156323760_156323846_156324825_156325056_156325959_156326117_156326258_156327022
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126838	chr4	+	3923	2	ISM	ENSMUSG00000095567.9	ENSMUST00000238476.2	722	3	1507	-3255	1507	78	3prime_fragment	FALSE	canonical	3	2089	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTCTCTGTGTCTGCCAG	NA	False	NA	NA	False	NA	NA	NA	156323182	156327192	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr4_+_156323760_156323846
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126858	chr4	+	3778	2	NIC	ENSMUSG00000095567.9	novel	2945	18	NA	NA	1507	78	intron_retention	FALSE	canonical	3	1505	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTCTCTGTGTCTGCCAG	NA	False	NA	NA	False	NA	NA	NA	156323182	156327192	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr4_+_156324825_156325056
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126863	chr4	+	193	1	Intergenic	novelGene_3921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCACAGCGCGTGAACACA	NA	False	NA	NA	False	NA	NA	NA	156344342	156344535	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_156344300_156344500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126871	chr4	+	206	1	Intergenic	novelGene_3922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAACCCTAAAATTAGGAG	NA	False	NA	NA	False	NA	NA	NA	156372633	156372839	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_156372600_156372800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126881	chr4	-	201	1	Intergenic	novelGene_3923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTTTTAGAGTTCTAG	NA	False	NA	NA	False	NA	NA	NA	156374393	156374192	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_-_156374200_156374400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126882	chr4	+	210	1	Intergenic	novelGene_3924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGATTTTTTAAAAAGTA	NA	False	NA	NA	False	AAAAAG	-9	NA	156378542	156378752	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_+_156378500_156378800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126896	chr4_JH584295v1_random	-	247	5	Intergenic	novelGene_3925	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	34.358405085219	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTGGGAGGCCACGCC	NA	False	NA	NA	False	NA	NA	NA	1476	66	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr4_JH584295v1_random_-_110_564_634_707_753_971_1025_1439
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126912	chr5	+	553	1	FSM	ENSMUSG00000062353.7	ENSMUST00000118533.2	438	1	-42	-73	-42	73	mono-exon	FALSE	NA	NA	NA	NA	NA	1139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACCATGTTATTATTAA	NA	False	NA	NA	False	NA	NA	NA	3286388	3286941	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_3286400_3286900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126921	chr5	-	181	1	Intergenic	novelGene_3926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGGTAATAGCAAGACAA	NA	False	NA	NA	False	NA	NA	NA	3518924	3518743	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_3518700_3518900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126922	chr5	+	185	1	Intergenic	novelGene_3927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGGAGAAGAAGAAGA	4523	False	NA	NA	False	NA	NA	NA	3526785	3526970	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_3526800_3527000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126929	chr5	+	2013	11	FSM	ENSMUSG00000058503.12	ENSMUST00000115527.8	1491	11	-21	-501	-16	3	multi-exon	FALSE	canonical	0	0	junction_10	59.9796632201282	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTCTTTGTGTATCAGT	NA	False	NA	22	True	AGTAAA	-18	NA	3593816	3620241	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3608694_3609096_3609160_3609605_3609699_3611038_3611090_3614240_3614328_3615702_3615751_3618986
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126945	chr5	-	188	1	Intergenic	novelGene_3928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGCTGGTCTAACTGGAT	NA	False	NA	NA	False	NA	NA	NA	3601076	3600888	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_3600900_3601100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126975	chr5	-	1615	5	FSM	ENSMUSG00000007415.16	ENSMUST00000007559.15	2545	5	-29	959	-29	370	multi-exon	FALSE	canonical	3	302	junction_1	62.6592969957372	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTAGTGTCTATTTTTCT	NA	False	NA	32	True	TATAAA	-1	NA	3697963	3690919	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_3691581_3693557_3693742_3694880_3694941_3696783_3696910_3697379
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126985	chr5	-	6634	20	NIC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-189	1	combination_of_known_junctions	TRUE	canonical	3	68	junction_14	13.2648286332828	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCATTCTCTGCCTTCTGG	NA	False	NA	-4	True	AATAAA	-19	NA	3853114	3739998	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000126997	chr5	+	174	1	Intergenic	novelGene_3929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAACTATTATATTAAAGAA	NA	False	NA	NA	False	NA	NA	NA	3763706	3763880	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_3763700_3763900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127005	chr5	+	2940	17	FSM	ENSMUSG00000000600.16	ENSMUST00000080085.9	2930	17	-10	0	-10	0	multi-exon	FALSE	canonical	0	0	junction_16	61.5435567301728	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTATTTAAACCATTTC	7975	False	NA	10	True	AATAAA	-23	NA	3853173	3891359	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_3853484_3856464_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127018	chr5	+	2976	17	NIC	ENSMUSG00000000600.16	novel	2930	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	59.7316590574044	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTATTTAAACCATTTC	7985	False	NA	10	True	AATAAA	-23	NA	3853183	3891359	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_3853484_3856418_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127023	chr5	-	1357	2	FSM	ENSMUSG00000040429.7	ENSMUST00000044746.5	1376	2	19	0	-7	0	multi-exon	FALSE	canonical	3	112	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTATTTTGTATGTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	3943914	3940580	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_3941898_3943874
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127054	chr5	+	1360	2	FSM	ENSMUSG00000053178.6	ENSMUST00000177258.2	1368	2	9	-1	9	1	multi-exon	FALSE	canonical	3	119	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTATTTTGTATGTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	4242375	4247652	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_4242419_4246335
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127073	chr5	-	2977	10	FSM	ENSMUSG00000040464.16	ENSMUST00000115441.9	2972	10	-1	-4	-1	4	multi-exon	FALSE	canonical	3	193	junction_5	43.7924397331066	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGTTCCTAATGTTTC	NA	False	NA	NA	False	GATAAA	-23	NA	5609539	5587449	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_5589452_5592301_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598001_5605237_5605383_5606064_5606157_5607212_5607407_5609432
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127085	chr5	-	2990	10	NNC	ENSMUSG00000040464.16	novel	2972	10	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	83.4476253277438	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTTTCTGTTCCTAATG	NA	False	NA	NA	False	GATAAA	-19	NA	5609501	5587453	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_-_5589452_5592246_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598001_5605237_5605383_5606064_5606157_5607212_5607407_5609432
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127086	chr5	-	3011	11	NIC	ENSMUSG00000040464.16	novel	2972	10	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_7	110.515564514687	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTTTCTGTTCCTAATG	NA	False	NA	NA	False	GATAAA	-19	NA	5609501	5587453	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_5589452_5592301_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598001_5604823_5604900_5605237_5605383_5606064_5606157_5607212_5607407_5609432
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127094	chr5	-	1497	2	Genic_Genomic	ENSMUSG00000100801.2	novel	1941	1	NA	NA	-78	115	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGTATTGGTTACACG	NA	False	NA	35	True	TTTAAA	-39	NA	5833633	5831499	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr5_-_5832082_5832718
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127144	chr5	+	3078	14	ISM	ENSMUSG00000040584.9	ENSMUST00000047753.5	4997	28	53107	57	-6635	-52	3prime_fragment	FALSE	canonical	3	48	junction_7	59.5291187263121	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCATAATTGTAAATAAG	NA	False	NA	NA	False	AATAAA	-21	NA	8763183	8798518	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr5_+_8763349_8764886_8765064_8765741_8765889_8768978_8769087_8769990_8770069_8773158_8773243_8776772_8776977_8782291_8782393_8783598_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127158	chr5	+	4345	28	FSM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	-39	0	0	0	multi-exon	TRUE	canonical	3	66	junction_6	57.377196351684	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTGTTATGTATATGA	NA	False	NA	10	True	ATTAAA	-17	NA	8848146	8916315	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8860557_8860616_8862654_8862847_8863573_8863746_8864722_8864848_8871271_8871444_8873931_8874046_8874186_8874298_8874472_8874599_8874688_8874893_8875112_8875284_8875550_8875713_8877325_8877500_8877702_8877850_8878822_8878931_8882193_8882272_8885027_8885112_8887590_8887795_8895747_8895849_8899511_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127159	chr5	+	1370	6	ISM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	-39	52775	0	-111	5prime_fragment	FALSE	canonical	3	110	junction_4	19.0850727009357	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATTTGTAACACAATTT	NA	False	NA	3	True	AATAAA	-21	NA	8848146	8863540	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8860557_8860616_8862654
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127169	chr5	+	3408	5	ISM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	-38	52775	1	-111	intron_retention	FALSE	canonical	3	110	junction_4	17.1955662890176	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATTTGTAACACAATTT	NA	False	NA	3	True	AATAAA	-21	NA	8848147	8863540	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8860557
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127198	chr5	+	1090	5	FSM	ENSMUSG00000079659.6	ENSMUST00000115365.3	1040	5	-48	-2	31	2	multi-exon	FALSE	canonical	3	208	junction_1	62.4019230472908	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTCCTCCTTTTT	NA	False	NA	12	True	AATAAA	-23	NA	9150698	9169047	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_9150860_9151216_9151396_9166479_9166531_9167458_9167564_9168453
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127225	chr5	-	3515	17	FSM	ENSMUSG00000042508.17	ENSMUST00000095017.11	3498	17	-13	-4	-3	0	multi-exon	FALSE	canonical	3	112	junction_5	37.579706957346	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGAGCCATGCAATTA	NA	False	NA	-1	True	AATAAA	-24	NA	9211762	9168867	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127235	chr5	+	197	1	Intergenic	novelGene_3930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAAAAGGTTAATGGAA	NA	False	NA	NA	False	NA	NA	NA	9917141	9917338	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_9917100_9917300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127244	chr5	+	214	1	Intergenic	novelGene_3931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGCTGTAGTGATTCAC	NA	False	NA	NA	False	AAGAAA	-3	NA	11629387	11629601	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_11629400_11629600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127246	chr5	+	207	1	Intergenic	novelGene_3932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGCTGTAGTGATTCAC	NA	False	NA	NA	False	AAGAAA	-3	NA	11716444	11716651	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_11716400_11716700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127261	chr5	+	102	1	Intergenic	novelGene_3933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAAACAAACAGTCATATA	NA	False	NA	NA	False	NA	NA	NA	12205070	12205172	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_12205100_12205200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127266	chr5	-	225	1	Intergenic	novelGene_3934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGAAAGAAAAGAATTCTC	NA	False	NA	NA	False	AAAAAG	-24	NA	12387202	12386977	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_12387000_12387200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127285	chr5	+	199	1	Intergenic	novelGene_3935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTGAGTTATATGTGCT	4818	False	NA	NA	False	NA	NA	NA	20122374	20122573	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_20122400_20122600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127291	chr5	-	206	1	Intergenic	novelGene_3936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATCTCAGATATATATA	NA	False	NA	NA	False	NA	NA	NA	20835093	20834887	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_20834900_20835100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127293	chr5	-	282	1	Intergenic	novelGene_3937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTTTTTGTTATTCC	NA	False	NA	NA	False	NA	NA	NA	20861723	20861441	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_20861400_20861700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127302	chr5	-	4702	18	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	-12	-106	combination_of_known_junctions	FALSE	canonical	3	53	junction_9	51.0853143531539	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTGTTTTTTTAAG	NA	False	NA	-8	True	AATAAA	-16	NA	21087134	20963766	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127303	chr5	-	4731	18	FSM	ENSMUSG00000039987.16	ENSMUST00000118174.8	4840	18	3	106	3	-106	multi-exon	TRUE	canonical	3	159	junction_9	38.2607155309617	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTGTTTTTTTAAG	NA	False	NA	-8	True	AATAAA	-16	NA	21087119	20963766	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127325	chr5	-	182	1	Intergenic	novelGene_3938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTAAGGAAGT	NA	False	NA	NA	False	NA	NA	NA	21039570	21039388	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_21039400_21039600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127331	chr5	+	200	1	Intergenic	novelGene_3939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCTTGCTCATATTGAT	NA	False	NA	NA	False	NA	NA	NA	21052595	21052795	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_21052600_21052800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127338	chr5	+	881	2	FSM	ENSMUSG00000045435.10	ENSMUST00000115259.3	1147	2	266	0	-50	0	multi-exon	FALSE	canonical	3	465	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCACATGCCTCTTAC	NA	False	NA	8	True	AATAAA	-18	NA	21087454	21091868	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_21087654_21091186
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127355	chr5	+	202	1	Intergenic	novelGene_3940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGTGTTTCCTTAATAAG	NA	False	NA	NA	False	NA	NA	NA	21111448	21111650	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_21111400_21111600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127364	chr5	+	200	1	Intergenic	novelGene_3941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTCGACTGCTCTTCCT	3190	False	NA	NA	False	NA	NA	NA	21189572	21189772	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_21189600_21189800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127376	chr5	+	203	1	Intergenic	novelGene_3942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTGCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	21232790	21232993	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_21232800_21233000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127386	chr5	+	2962	8	FSM	ENSMUSG00000047221.6	ENSMUST00000056045.5	3027	8	-10	75	-10	-75	multi-exon	FALSE	canonical	1	21	junction_1	12.2873753029984	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCTTTTTATTAATATT	NA	False	NA	16	True	AATAAA	-16	NA	21629945	21687047	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_21630575_21634721_21634832_21638688_21638782_21643697_21643837_21652313_21652356_21660779_21660876_21664156_21664292_21685329
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127394	chr5	+	2102	6	FSM	ENSMUSG00000038525.17	ENSMUST00000072896.13	2221	6	124	-5	-14	5	multi-exon	FALSE	canonical	3	325	junction_5	40.0679422980517	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAATTTGTTTTATTTGTG	NA	False	NA	11	True	AGTAAA	-31	NA	21851000	21867697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_21851234_21853617_21853767_21856742_21856878_21858373_21858551_21865550_21865623_21866361
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127414	chr5	+	1614	13	FSM	ENSMUSG00000029017.14	ENSMUST00000030882.12	1615	13	1	0	1	0	multi-exon	TRUE	canonical	3	306	junction_5	33.8430815184827	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTTAGTCTGTTATATGT	NA	False	NA	16	True	AATAAA	-18	NA	21942139	21962150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_21942275_21943866_21944008_21945037_21945125_21945482_21945613_21947755_21947955_21948376_21948457_21950975_21951089_21951975_21952120_21953746_21953908_21961399_21961486_21961584_21961674_21961812_21961889_21961977
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127423	chr5	-	2138	17	FSM	ENSMUSG00000029014.15	ENSMUST00000030771.12	2133	17	-2	-3	-2	3	multi-exon	FALSE	canonical	3	849	junction_11	91.8299209136107	668	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAGTCATCATTTAAAAG	NA	False	NA	6	True	AATAAA	-33	NA	21990251	21962261	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_21962408_21962762_21962918_21965363_21965472_21965623_21965725_21966538_21966724_21968443_21968514_21968738_21968828_21971553_21971704_21973434_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714_21981814_21986318_21986395_21988044_21988236_21989986
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127448	chr5	-	2114	14	FSM	ENSMUSG00000029012.12	ENSMUST00000030872.12	2103	14	-6	-5	-6	1	multi-exon	TRUE	canonical	3	527	junction_10	41.6678895284064	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTCTTTGGTTCTGA	NA	False	NA	-2	True	AATAAA	-19	NA	22755379	22691481	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753015_22755189
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127458	chr5	-	1975	14	NIC	ENSMUSG00000029012.12	novel	2103	14	NA	NA	34	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_12	150.475380832502	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTAGCTGTGTTCTTTGGT	NA	False	NA	-7	True	AATAAA	-14	NA	22755339	22691486	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751503_22752921_22753015_22755189
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127462	chr5	+	202	1	Intergenic	novelGene_3943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAGTCAAGGACTTTTAG	NA	False	NA	NA	False	NA	NA	NA	22736607	22736809	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_22736600_22736800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127467	chr5	-	655	1	FSM	ENSMUSG00000081855.5	ENSMUST00000121001.2	555	1	-72	-28	-72	28	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAGGTCAAAACAAAACA	NA	False	NA	NA	False	AATAAA	-28	NA	22818252	22817597	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_22817600_22818300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127487	chr5	-	3555	16	NNC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	-10	-688	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_8	55.3628836756982	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCCTTGCTTATTACCC	NA	False	NA	-3	True	ATTAAA	-24	NA	23880975	23711137	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127503	chr5	+	192	1	Intergenic	novelGene_3944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCTGAGGACTGAGTAT	NA	False	NA	NA	False	NA	NA	NA	23742604	23742796	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_23742600_23742800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127508	chr5	-	184	1	Intergenic	novelGene_3945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATTAGGGCAGAGGATCC	3692	False	NA	NA	False	NA	NA	NA	23919229	23919045	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_23919000_23919200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127518	chr5	-	3407	16	FSM	ENSMUSG00000057541.15	ENSMUST00000119946.8	3407	16	0	0	0	0	multi-exon	TRUE	canonical	3	301	junction_13	29.1369181623589	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCATGTAAAAATCTTGTC	NA	False	NA	-8	True	AATAAA	-24	NA	23988709	23945645	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127528	chr5	+	200	1	Intergenic	novelGene_3946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAGCATAAGATTAACTG	NA	False	NA	NA	False	NA	NA	NA	24021264	24021464	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_24021300_24021500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127539	chr5	-	408	3	FSM	ENSMUSG00000028998.7	ENSMUST00000030851.7	1125	3	9	708	9	-708	multi-exon	FALSE	canonical	3	3790	junction_2	61.5	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCCTTTCATACTTT	NA	False	NA	-29	True	AATAAA	-18	NA	24049150	24044649	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_24044827_24046707_24046757_24048968
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127546	chr5	-	5968	12	NIC	ENSMUSG00000028995.15	novel	5659	11	NA	NA	-11	0	combination_of_known_junctions	TRUE	canonical	3	47	junction_11	7.3033446430527	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCTTCTAGATCATTCT	NA	False	NA	NA	False	AATAAA	-17	NA	24235699	24165928	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_24170357_24171131_24171430_24184485_24184646_24185484_24185573_24188147_24188265_24190742_24190839_24191135_24191252_24191731_24191813_24192882_24193063_24196733_24196836_24204938_24205018_24235476
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127553	chr5	+	204	1	Intergenic	novelGene_3947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTATCAAGCCGGGCATG	NA	False	NA	NA	False	TTTAAA	-9	NA	24221288	24221492	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_24221300_24221500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127559	chr5	+	239	1	Intergenic	novelGene_3948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGCTTTTCTCCAATGA	7023	False	NA	NA	False	AAGAAA	-40	NA	24263785	24264024	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_24263800_24264000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127575	chr5	+	182	1	Intergenic	novelGene_3949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	316	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTTATATGCACTGTG	1230	False	NA	14	True	NA	NA	NA	24366044	24366226	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_24366000_24366200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127584	chr5	+	2881	7	FSM	ENSMUSG00000048439.16	ENSMUST00000049887.13	2914	7	33	0	-4	0	multi-exon	TRUE	canonical	3	52	junction_5	7.43116560320265	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTGTCTGTTATCTACC	5179	False	NA	NA	False	NA	NA	NA	24369993	24389011	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_24370202_24372340_24372564_24374293_24374389_24380451_24380529_24382997_24383085_24386078_24386164_24386905
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127598	chr5	-	1714	3	ISM	ENSMUSG00000038295.15	ENSMUST00000059401.7	3902	14	2965	2880	-1212	44	internal_fragment	FALSE	canonical	3	27	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTGCTCTGGAGATTATT	8942	False	NA	NA	False	NA	NA	NA	24594176	24592058	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr5_-_24592126_24592384_24592542_24592686
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127603	chr5	+	2712	16	FSM	ENSMUSG00000028973.19	ENSMUST00000073076.12	2939	16	229	-2	-12	0	multi-exon	FALSE	canonical	3	156	junction_4	17.0567679626984	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGAGGCTGTAGCTTAGTA	NA	False	NA	31	True	AATAAA	-21	NA	24599381	24614945	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_24599582_24604910_24605221_24605522_24605679_24605754_24605850_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24611665_24611800_24612305_24612454_24613565_24613817_24614351
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127611	chr5	+	4132	23	FSM	ENSMUSG00000028962.15	ENSMUST00000080067.13	4179	23	44	3	0	0	multi-exon	FALSE	canonical	3	23	junction_2	8.13471288485391	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTAGGCTTGGTCTTGTGTC	NA	False	NA	7	True	AGTAAA	-16	NA	24630273	24645945	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_24630434_24632520_24632635_24634413_24634577_24634701_24634947_24635028_24635148_24636206_24636440_24636520_24636664_24637759_24637941_24639101_24639238_24639335_24639502_24639632_24639748_24639830_24640016_24640112_24640339_24640542_24640759_24640839_24640989_24641074_24641270_24643692_24643948_24644053_24644144_24644229_24644397_24644734_24644989_24645078_24645249_24645401_24645576_24645669
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127619	chr5	-	1881	10	FSM	ENSMUSG00000028959.15	ENSMUST00000030800.13	1893	10	18	-6	18	6	multi-exon	FALSE	canonical	3	1073	junction_9	118.54686003725	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTTTCTGGGATAACT	NA	False	NA	2	True	NA	NA	NA	24650267	24646030	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650063
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127646	chr5	-	2650	8	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1095	junction_1	125.764762593519	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650184	24646036	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647394_24648001_24648142_24648274_24648455_24648892
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127648	chr5	-	1882	10	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_9	388.340279702616	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650184	24646036	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649394_24650063
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127649	chr5	-	1808	10	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_5	369.485762100601	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650183	24646036	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647099_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650063
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127653	chr5	-	1860	9	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1073	junction_8	121.867179236249	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650184	24646036	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_24646260_24646333_24646449_24646525_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650063
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127657	chr5	-	1890	9	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1073	junction_8	125.284675838668	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650184	24646036	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650063
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127663	chr5	-	2563	9	FSM	ENSMUSG00000028959.15	ENSMUST00000149085.8	2552	9	-10	-1	0	0	multi-exon	FALSE	canonical	3	1095	junction_1	118.721049102508	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650195	24646036	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127681	chr5	-	4148	1	NIC	ENSMUSG00000028959.15	novel	3056	10	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650184	24646036	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_24646000_24650200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127690	chr5	-	1278	3	FSM	ENSMUSG00000028958.16	ENSMUST00000030799.15	1333	3	50	5	-13	3	multi-exon	FALSE	canonical	3	68	junction_2	11	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTGTGTCTGTGTGTTG	NA	False	NA	-1	True	ATTAAA	-21	NA	24652802	24650460	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_24651272_24651531_24651951_24652754
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127699	chr5	+	3208	16	NIC	ENSMUSG00000023353.15	novel	3207	18	NA	NA	-310	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_11	24.1655402036316	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGGTGCCTCAGTGCC	NA	False	NA	21	True	AATAAA	-27	NA	24656864	24707045	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127729	chr5	-	2511	14	NNC	ENSMUSG00000028953.11	novel	2569	14	NA	NA	58	3	at_least_one_novel_splicesite	FALSE	canonical	3	152	junction_12	377.797979890665	20	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGGTCTCTGAGCCTT	NA	False	NA	-26	True	AATAAA	-24	NA	24782407	24770339	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_-_24771002_24771476_24771681_24772181_24772311_24772498_24772562_24773202_24773314_24773564_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779375_24781516_24781726_24782344
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127746	chr5	+	185	1	Intergenic	novelGene_3950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATATCGCAGTCCCTGAT	NA	False	NA	NA	False	NA	NA	NA	24787421	24787606	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_24787400_24787600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127766	chr5	+	202	1	Intergenic	novelGene_3951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCATGATGTCTGTTCAC	6623	False	NA	NA	False	NA	NA	NA	24849617	24849819	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_24849600_24849800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127772	chr5	+	195	1	Intergenic	novelGene_3952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTCAGAATAAACCCTT	NA	False	NA	NA	False	NA	NA	NA	24886183	24886378	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_24886200_24886400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127787	chr5	+	3126	15	FSM	ENSMUSG00000028954.12	ENSMUST00000068825.8	3269	15	143	0	-20	0	multi-exon	TRUE	canonical	3	384	junction_1	91.6660977100463	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGTCTGACGCAGTGA	NA	False	NA	11	True	AATAAA	-20	NA	24890964	24915376	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127803	chr5	+	205	1	Intergenic	novelGene_3953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTTCTCTCCGAGGCAGA	9752	False	NA	NA	False	NA	NA	NA	24995603	24995808	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_24995600_24995800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127815	chr5	-	1374	8	FSM	ENSMUSG00000028945.10	ENSMUST00000030787.9	1784	8	-7	417	-7	-417	multi-exon	FALSE	canonical	3	1533	junction_1	69.8271919433531	519	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTTGGTGTGGTTTTTA	NA	False	NA	0	True	AATAAA	-26	NA	25047629	25008237	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_25008755_25011996_25012079_25012602_25012651_25012745_25012803_25013350_25013434_25018795_25018864_25022757_25022830_25047182
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127848	chr5	+	2592	12	FSM	ENSMUSG00000038072.15	ENSMUST00000045737.14	2552	12	-40	0	-40	0	multi-exon	FALSE	canonical	3	184	junction_8	26.0711042984152	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGACTCTTCTATCTCT	NA	False	NA	13	True	AATAAA	-27	NA	25427839	25470916	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_25428030_25452451_25452785_25453833_25453958_25455084_25455252_25457021_25457148_25459904_25460155_25462390_25462509_25463809_25463963_25466932_25467152_25468377_25468483_25469959_25470098_25470247
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127862	chr5	+	178	1	Intergenic	novelGene_3954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAGTTTAAAAAAAAGTAGC	NA	False	NA	NA	False	TTTAAA	-2	NA	25728923	25729101	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_25728900_25729100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127869	chr5	+	182	1	Intergenic	novelGene_3955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTCTTTAAAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	25747674	25747856	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_25747700_25747900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127891	chr5	+	2120	12	FSM	ENSMUSG00000056367.15	ENSMUST00000088244.6	1712	12	-62	-346	-33	0	multi-exon	TRUE	canonical	3	90	junction_4	20.0016528242663	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTTCCTTGTGGTCTC	NA	False	NA	10	True	AATAAA	-18	NA	25964961	26055686	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_25965127_26003443_26003500_26014782_26014908_26016914_26017026_26027402_26027499_26030105_26030214_26034523_26034668_26036608_26036783_26037383_26037477_26053359_26053486_26054070_26054155_26054848
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127903	chr5	+	185	1	Intergenic	novelGene_3956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTATCTTTGTTAACTTA	NA	False	NA	NA	False	NA	NA	NA	26273973	26274158	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_26274000_26274200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127910	chr5	+	195	1	Intergenic	novelGene_3957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATATTTTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26997005	26997200	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_26997000_26997200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127915	chr5	+	191	1	Intergenic	novelGene_3958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCCCAAACTAACATGTAT	NA	False	NA	NA	False	NA	NA	NA	27829937	27830128	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_27829900_27830100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127925	chr5	-	180	1	Intergenic	novelGene_3959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATACCTAACTTT	NA	False	NA	NA	False	NA	NA	NA	27998536	27998356	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_27998400_27998500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127933	chr5	+	2713	5	FSM	ENSMUSG00000045294.12	ENSMUST00000059155.11	2697	5	-7	-9	-7	9	multi-exon	FALSE	canonical	3	1125	junction_2	41.7215471908701	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGAGGTTTTCTTTTGG	NA	False	NA	23	True	ATTAAA	-22	NA	28276353	28283669	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_28276794_28278544_28278670_28279479_28279647_28280059_28280160_28281788
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127937	chr5	+	4741	3	ISM	ENSMUSG00000045294.12	ENSMUST00000059155.11	2697	5	0	-2	0	2	intron_retention	FALSE	canonical	3	1125	junction_2	51.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTATTCCTGAGGTTTT	NA	False	NA	16	True	ATTAAA	-15	NA	28276360	28283662	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr5_+_28276794_28278544_28278670_28279479
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127938	chr5	+	3110	4	NIC	ENSMUSG00000045294.12	novel	2697	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	1125	junction_2	45.6143252352445	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTATTCCTGAGGTT	NA	False	NA	14	True	ATTAAA	-13	NA	28276360	28283660	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_28276794_28278544_28278670_28279479_28280160_28281788
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127942	chr5	+	3920	3	NIC	ENSMUSG00000045294.12	novel	2697	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	1139	junction_2	44.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTATTCCTGAGGTT	NA	False	NA	14	True	ATTAAA	-13	NA	28276360	28283660	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_28276794_28278544_28280160_28281788
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127946	chr5	+	3506	4	NIC	ENSMUSG00000045294.12	novel	2697	5	NA	NA	1	0	intron_retention	FALSE	canonical	3	1139	junction_3	36.7362975210561	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTATTCCTGAGGTT	NA	False	NA	14	True	ATTAAA	-13	NA	28276361	28283660	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_28276794_28278544_28279647_28280059_28280160_28281788
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127963	chr5	-	3532	3	FSM	ENSMUSG00000044681.20	ENSMUST00000118882.2	1984	3	75	-1623	75	-7	multi-exon	FALSE	canonical	3	175	junction_1	2	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTAAGAGACCAGTGTGG	NA	False	NA	NA	False	ATTAAA	-20	NA	28414945	28405823	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_28408435_28412284_28412382_28414121
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127979	chr5	+	6396	19	FSM	ENSMUSG00000048271.15	ENSMUST00000059644.13	9510	19	-16	3130	-16	4	multi-exon	FALSE	canonical	3	71	junction_15	26.3991792801721	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCATCTGTGTATTATTT	NA	False	NA	11	True	CATAAA	-25	NA	28522158	28621107	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613249_28613460_28615568_28615758_28618284_28618374_28618565
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127980	chr5	+	6272	18	FSM	ENSMUSG00000048271.15	ENSMUST00000114884.8	6256	18	-16	0	-16	0	multi-exon	TRUE	canonical	3	22	junction_5	33.4726040951925	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACCCTCATCTGTGTATT	NA	False	NA	7	True	CATAAA	-21	NA	28522158	28621103	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613249_28613460_28615568_28615758_28618284_28618374_28618565
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000127997	chr5	+	3468	11	FSM	ENSMUSG00000001569.11	ENSMUST00000001611.11	9219	11	11	5740	11	-5740	multi-exon	FALSE	canonical	3	157	junction_8	15.8962259671911	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAGATAACATGATTGTG	2970	False	NA	NA	False	NA	NA	NA	29639672	29657101	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_29640642_29640927_29641056_29642594_29642791_29644823_29645148_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128010	chr5	+	189	1	Intergenic	novelGene_3960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGGATCTTCCTACTTC	NA	False	NA	NA	False	NA	NA	NA	29653429	29653618	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_29653400_29653600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128017	chr5	-	189	1	Intergenic	novelGene_3961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGTTGAATATGGA	NA	False	NA	NA	False	NA	NA	NA	29701648	29701459	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_29701500_29701600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128056	chr5	+	208	1	Intergenic	novelGene_3962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAATGCAGCAAGTATCT	NA	False	NA	NA	False	NA	NA	NA	29888330	29888538	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_29888300_29888500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128058	chr5	+	191	1	Intergenic	novelGene_3963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGCAGCATGGAGGATAAA	NA	False	NA	NA	False	NA	NA	NA	29904027	29904218	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_29904000_29904200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128066	chr5	+	2638	10	FSM	ENSMUSG00000029131.15	ENSMUST00000008733.15	2918	10	281	-1	-20	1	multi-exon	FALSE	canonical	3	618	junction_9	548.115559591832	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGTGTGTATGTGCA	4575	False	NA	34	True	AATAAA	-45	NA	29940966	29991477	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322_29971394_29986127_29986449_29990028
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128085	chr5	+	1972	7	NIC	ENSMUSG00000029131.15	novel	1024	7	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	922.086522814186	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTTGTATTTGGTCAGA	4592	False	NA	13	True	AATAAA	-21	NA	29940983	29962967	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29959590_29961231_29961337_29962545
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128102	chr5	+	199	1	Intergenic	novelGene_3964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGATCAATTCACACTC	1443	False	NA	NA	False	NA	NA	NA	30222408	30222607	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_30222400_30222600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128123	chr5	+	2579	3	ISM	ENSMUSG00000044576.7	ENSMUST00000058045.5	3865	6	9536	0	9536	0	3prime_fragment	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCCTGGGTGTTGGCTGA	NA	False	NA	NA	False	AATAAA	-29	NA	30319694	30323376	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr5_+_30319986_30320884_30321055_30321258
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128129	chr5	-	2857	20	FSM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	41	1119	41	3	multi-exon	FALSE	canonical	3	340	junction_11	40.0253382350609	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCCTGTTTTCTTCTGTC	NA	False	NA	0	True	AATAAA	-26	NA	30360119	30324420	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335_30326532_30327147_30327217_30327618_30327760_30328605_30328693_30331562_30331735_30333797_30333933_30334818_30334929_30337237_30337295_30339055_30339175_30339976_30340100_30345946_30346050_30347716_30347837_30349156_30349296_30350232_30350367_30352343_30352415_30352977_30353020_30359879
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128136	chr5	+	2030	16	FSM	ENSMUSG00000059447.14	ENSMUST00000026841.15	2033	16	-1	4	-1	0	multi-exon	FALSE	canonical	3	438	junction_6	59.1301389591918	345	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCGTAGTCTCGTTATTA	NA	False	NA	6	True	AATAAA	-21	NA	30360244	30389587	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_30360338_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128155	chr5	-	189	1	Intergenic	novelGene_3965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAGAACTATTTTAC	NA	False	NA	NA	False	NA	NA	NA	30415066	30414877	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_30414900_30415100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128167	chr5	+	3046	6	FSM	ENSMUSG00000029175.18	ENSMUST00000062962.12	3088	6	-6	48	-6	-48	multi-exon	FALSE	canonical	3	97	junction_4	8.49470423263812	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTTGGAATTTATTT	6672	False	NA	6	True	AATAAA	-17	NA	30805270	30817025	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_30805443_30812091_30812165_30812838_30813011_30813231_30813445_30814090_30814202_30814720
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128184	chr5	+	924	5	FSM	ENSMUSG00000029177.10	ENSMUST00000144742.6	1466	5	121	421	1	0	multi-exon	FALSE	canonical	3	1270	junction_1	201.219407612685	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTGGCAGTCCCGCCATA	9187	False	NA	40	True	AATAAA	-24	NA	30824241	30831753	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_30824458_30829807_30829915_30830325_30830404_30830636_30830788_30831381
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128185	chr5	+	1479	6	FSM	ENSMUSG00000029177.10	ENSMUST00000133316.8	1031	6	1	-449	1	-3	multi-exon	FALSE	canonical	3	531	junction_2	579.285905231605	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTGAAGTAAAGTTACTG	9187	False	NA	NA	False	AATGAA	-2	NA	30824241	30832171	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_30824458_30827035_30827173_30829807_30829915_30830325_30830404_30830636_30830788_30831381
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128193	chr5	+	190	1	Intergenic	novelGene_3966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTCAGACTTTTTCTGA	6971	False	NA	NA	False	NA	NA	NA	30860799	30860989	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_30860800_30861000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128196	chr5	+	4888	13	FSM	ENSMUSG00000029168.15	ENSMUST00000114729.8	5191	13	297	6	-33	0	multi-exon	FALSE	canonical	3	45	junction_9	9.12718771339538	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGCCTCTGTTGTGTTTT	NA	False	NA	5	True	ATTAAA	-17	NA	30869204	30956713	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_30869347_30902565_30902831_30934663_30934823_30935318_30935499_30936211_30936281_30938822_30938868_30940538_30940615_30941654_30941812_30946042_30946185_30948835_30948979_30949463_30949672_30951277_30951447_30953580
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128205	chr5	+	193	1	Intergenic	novelGene_3967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTAAGGGCAGGAATTGA	NA	False	NA	NA	False	NA	NA	NA	30986977	30987170	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_30987000_30987200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128208	chr5	+	176	1	Intergenic	novelGene_3968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCAGAGCTAGCGGCGTT	NA	False	NA	NA	False	NA	NA	NA	31002241	31002417	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_31002200_31002400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128215	chr5	+	189	1	Intergenic	novelGene_3969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCATAGACTGAGGATCAG	NA	False	NA	NA	False	NA	NA	NA	31014359	31014548	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_31014400_31014500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128218	chr5	+	2832	17	FSM	ENSMUSG00000038828.14	ENSMUST00000201203.4	6110	17	1567	1711	-52	1	multi-exon	TRUE	canonical	3	358	junction_2	22.5422346662881	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCCTGTCTGAATCTTC	NA	False	NA	20	True	AATAAA	-20	NA	31026922	31034813	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_31027163_31027932_31028133_31028763_31028915_31029064_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128227	chr5	+	2928	16	NIC	ENSMUSG00000038828.14	novel	6110	17	NA	NA	0	1	intron_retention	FALSE	canonical	3	358	junction_2	22.4453905191145	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCCTGTCTGAATCTTC	NA	False	NA	20	True	AATAAA	-20	NA	31026976	31034813	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_31027163_31027932_31028133_31028763_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128245	chr5	-	454	3	FSM	ENSMUSG00000038803.8	ENSMUST00000132253.5	1144	3	57	633	-6	0	multi-exon	FALSE	canonical	3	823	junction_2	132.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTTTGTGGTCCCAAA	NA	False	NA	-5	True	NA	NA	NA	31065075	31063861	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_31064111_31064742_31064881_31065008
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128252	chr5	+	190	1	Intergenic	novelGene_3970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGATTTCTCATGAGCTT	NA	False	NA	16	True	NA	NA	NA	31067426	31067616	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_31067400_31067600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128278	chr5	-	2317	8	NIC	ENSMUSG00000045302.14	novel	6300	9	NA	NA	-1	1	intron_retention	TRUE	canonical	3	234	junction_6	22.518926280272	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGCAGTCCTCTTGTCA	NA	False	NA	-7	True	AATAAA	-22	NA	31117625	31112385	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116757_31117314
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128289	chr5	+	211	1	Intergenic	novelGene_3971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTACAAGTAGGGGCCTAG	3175	False	NA	NA	False	NA	NA	NA	31183371	31183582	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_31183400_31183600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128307	chr5	+	965	7	FSM	ENSMUSG00000013622.16	ENSMUST00000013766.13	966	7	1	0	1	0	multi-exon	FALSE	canonical	3	250	junction_6	22.1108319357027	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCGTACCTGTGCGTG	909	False	NA	12	True	AATAAA	-25	NA	31205979	31211967	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_31206101_31206805_31206925_31209540_31209613_31209805_31209878_31210106_31210229_31211304_31211403_31211606
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128323	chr5	+	7139	44	FSM	ENSMUSG00000013629.17	ENSMUST00000013773.12	7137	44	-2	0	-2	0	multi-exon	TRUE	canonical	3	481	junction_6	136.90610173497	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	7051	False	NA	18	True	AATAAA	-14	NA	31212121	31235823	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128333	chr5	+	178	1	Intergenic	novelGene_3972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATTTAATTAAATAAATAA	6174	False	NA	NA	False	NA	NA	NA	31258090	31258268	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_31258100_31258300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128338	chr5	+	1538	9	FSM	ENSMUSG00000062077.15	ENSMUST00000013771.15	1434	9	-104	0	-104	0	multi-exon	TRUE	canonical	2	14	junction_1	4.29389100932942	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCGGCTCCTTTTGCTGT	NA	False	NA	6	True	AATAAA	-19	NA	31273951	31294972	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_31274422_31288385_31288559_31289331_31289504_31291393_31291490_31293386_31293621_31294096_31294120_31294231_31294357_31294464_31294558_31294820
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128340	chr5	-	1714	8	FSM	ENSMUSG00000107283.4	ENSMUST00000154241.8	1724	8	10	0	10	0	multi-exon	FALSE	canonical	3	233	junction_7	57.209960599853	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCTTTAGCAGTTTTG	NA	False	NA	NA	False	TTTAAA	-13	NA	31311585	31297997	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_31299195_31302043_31302097_31302589_31302623_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311534
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128379	chr5	-	3460	20	NIC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	19	233	combination_of_known_junctions	TRUE	canonical	3	21	junction_19	184.702290965999	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGTGAGTGGGTGTTT	NA	False	NA	-3	True	AGTAAA	-21	NA	31337234	31314554	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31336988
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128381	chr5	+	193	1	Intergenic	novelGene_3973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAAAACAATCCAGTA	NA	False	NA	NA	False	NA	NA	NA	31329126	31329319	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_31329100_31329300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128420	chr5	-	1938	4	NNC	ENSMUSG00000043059.17	novel	2228	4	NA	NA	-7	0	intron_retention	FALSE	canonical	1	1	junction_3	89.7490328019689	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGTCTCTGCTGAATTG	NA	False	NA	-17	True	AATAAA	-16	NA	31359654	31356324	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_-_31357492_31357578_31358167_31358926_31359083_31359627
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128435	chr5	-	2274	10	FSM	ENSMUSG00000029147.12	ENSMUST00000031032.11	2307	10	37	-4	37	0	multi-exon	FALSE	canonical	3	595	junction_8	38.6382398699386	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATAGTGTCCTGCTTTA	NA	False	NA	-1	True	ACTAAA	-22	NA	31377994	31360007	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_31360629_31360915_31361019_31361373_31361504_31361796_31362032_31362341_31362474_31363381_31363798_31364906_31365040_31365356_31365443_31365730_31365801_31377646
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128441	chr5	-	195	1	FSM	ENSMUSG00000106717.2	ENSMUST00000200853.2	3972	1	359	3418	359	-3418	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTAATAATAATAGTGTTA	NA	False	NA	NA	False	NA	NA	NA	31371300	31371105	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_31371100_31371300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128445	chr5	+	2193	18	FSM	ENSMUSG00000029148.16	ENSMUST00000031034.12	2203	18	10	0	-3	0	multi-exon	FALSE	canonical	3	461	junction_13	30.9676692663879	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTTGTGCTTGCGGC	NA	False	NA	33	True	AATAAA	-21	NA	31398217	31408910	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_31398347_31401106_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128452	chr5	+	2093	19	NIC	ENSMUSG00000029148.16	novel	2203	18	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_2	109.789191939219	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTTGTGCTTGCGGC	NA	False	NA	33	True	AATAAA	-21	NA	31398232	31408910	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_31398347_31401106_31401177_31401261_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128468	chr5	-	5425	48	FSM	ENSMUSG00000038564.12	ENSMUST00000041565.11	5403	48	-24	2	-15	1	multi-exon	TRUE	canonical	3	41	junction_37	14.3941162971073	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCTGCATTCTTTGCTC	NA	False	NA	-1	True	ATTAAA	-18	NA	31448475	31410622	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_31410769_31410896_31410989_31411158_31411313_31411562_31411662_31411745_31411806_31411996_31412093_31412594_31412715_31412908_31413020_31413898_31414016_31414232_31414320_31414674_31414739_31414860_31414971_31415157_31415257_31417737_31417868_31417966_31418077_31418270_31418452_31418782_31418848_31419174_31419269_31420263_31420407_31420709_31420827_31420914_31421051_31421121_31421220_31421750_31421841_31422661_31422807_31422986_31423108_31423258_31423338_31423518_31423768_31423978_31424057_31424577_31424671_31424938_31425024_31428983_31429092_31429330_31429468_31433195_31433364_31434212_31434326_31437762_31437849_31438009_31438114_31438305_31438360_31438687_31438850_31439899_31439996_31440376_31440501_31441347_31441563_31442595_31442684_31442802_31442883_31443106_31443173_31443421_31443462_31443920_31444034_31444237_31444382_31448317
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128473	chr5	+	206	1	Intergenic	novelGene_3974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAAGTAGCCAGGTGGTA	NA	False	NA	NA	False	NA	NA	NA	31428111	31428317	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_31428100_31428300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128480	chr5	+	3243	13	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	77.4128093764563	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7143	False	NA	16	True	AATAAA	-17	NA	31609775	31639098	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_31609922_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128481	chr5	+	3305	14	FSM	ENSMUSG00000062761.8	ENSMUST00000076264.8	3299	14	-3	-3	1	3	multi-exon	FALSE	canonical	3	217	junction_1	41.4283440690995	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTCCTCCTTGCTGCCA	7143	False	NA	19	True	AATAAA	-20	NA	31609775	31639101	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_31609922_31610498_31610558_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128508	chr5	+	3824	13	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	7	0	intron_retention	FALSE	canonical	3	284	junction_12	29.0684059112677	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7198	False	NA	16	True	AATAAA	-17	NA	31609830	31639098	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_31610558_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128519	chr5	-	1428	2	NNC	ENSMUSG00000107142.2	novel	1535	2	NA	NA	-1203	-1	intron_retention	FALSE	canonical	3	94	junction_1	0	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGGTTATGTCTTTTGT	719	False	NA	1	True	NA	NA	NA	31646495	31643973	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_-_31645334_31646427
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128524	chr5	-	1301	2	NNC	ENSMUSG00000107142.2	novel	1535	2	NA	NA	-1205	2	intron_retention	FALSE	canonical	3	124	junction_1	0	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGTTATGTCTTTTG	717	False	NA	0	True	NA	NA	NA	31646497	31643974	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_-_31645206_31646427
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128534	chr5	+	178	1	FSM	ENSMUSG00000029138.5	ENSMUST00000202441.2	2737	1	1139	1420	1020	-1420	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGAGAGAGTGTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	31644222	31644400	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_31644200_31644400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128542	chr5	+	201	1	Intergenic	novelGene_3975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACTTTCCAAGAATGTCA	NA	False	NA	NA	False	NA	NA	NA	31651058	31651259	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_31651100_31651300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128545	chr5	+	3297	14	FSM	ENSMUSG00000064037.14	ENSMUST00000076949.13	3144	14	0	-153	0	153	multi-exon	FALSE	canonical	3	859	junction_7	68.5179542833234	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATATGGAGGTGCTTAAT	NA	False	NA	NA	False	NA	NA	NA	31652084	31670401	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128559	chr5	+	2117	13	NIC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	3	558	intron_retention	FALSE	canonical	3	859	junction_7	68.3745302644844	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGTAAGCTTTCCTG	NA	False	NA	26	True	GATAAA	-15	NA	31652099	31668761	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128583	chr5	+	2516	14	FSM	ENSMUSG00000029141.17	ENSMUST00000202950.4	2499	14	-19	2	-2	2	multi-exon	FALSE	canonical	3	47	junction_11	21.8978262140197	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGGTGATGATCATTC	NA	False	NA	9	True	AGTAAA	-19	NA	31684336	31711384	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31701013_31701258_31703523_31703611_31705954_31706026_31708056_31708127_31711082
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128587	chr5	+	2429	13	FSM	ENSMUSG00000029141.17	ENSMUST00000114533.9	2424	13	0	-5	0	0	multi-exon	FALSE	canonical	3	47	junction_10	19.394300422776	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGTGATGATCATTCCC	NA	False	NA	11	True	AGTAAA	-21	NA	31684338	31711386	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31701013_31701258_31705954_31706026_31708056_31708127_31711082
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128604	chr5	+	476	4	FSM	ENSMUSG00000106918.4	ENSMUST00000031024.14	478	4	2	0	2	0	multi-exon	FALSE	canonical	3	1273	junction_1	440.713814926043	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTCTCTTAGAGGTAT	NA	False	NA	19	True	AATAAA	-22	NA	31771284	31779988	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_31771367_31771946_31771966_31773724_31773832_31779720
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128615	chr5	+	399	3	NIC	ENSMUSG00000106918.4	novel	478	4	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_1	1111.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTCTCTTAGAGGTAT	NA	False	NA	19	True	AATAAA	-22	NA	31771342	31779988	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_31771367_31773724_31773832_31779720
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128620	chr5	+	2757	2	FSM	ENSMUSG00000106918.4	ENSMUST00000201620.2	2741	2	-14	-2	14	0	multi-exon	FALSE	canonical	3	2333	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTCTCTTAGAGGTAT	NA	False	NA	19	True	AATAAA	-22	NA	31771342	31779988	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_31773832_31779720
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128644	chr5	+	3080	8	FSM	ENSMUSG00000014956.16	ENSMUST00000015100.15	5962	8	119	2763	119	4	multi-exon	FALSE	canonical	3	1274	junction_2	51.5470856675363	371	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGATTATTCTGTGTTG	2814	False	NA	27	True	AGTAAA	-24	NA	32616305	32650104	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_32616752_32635409_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128672	chr5	+	196	1	Intergenic	novelGene_3976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGTTAAAAATCATAAGGA	NA	False	NA	NA	False	NA	NA	NA	32669903	32670099	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_32669900_32670100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128712	chr5	+	4002	12	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	1950	0	intron_retention	FALSE	canonical	2	22	junction_1	221.180043336301	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32770628	32844401	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_+_32770699_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128718	chr5	+	4056	12	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	6072	0	intron_retention	FALSE	canonical	3	45	junction_1	214.878516514574	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32774750	32844401	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_+_32774875_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128733	chr5	+	190	1	Intergenic	novelGene_3977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAATCAGCACAGTTGTT	NA	False	NA	NA	False	AATAAA	-28	NA	32778779	32778969	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_32778800_32779000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128742	chr5	+	174	1	Intergenic	novelGene_3978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGAATGGACTT	7543	False	NA	NA	False	NA	NA	NA	32845644	32845818	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_32845600_32845800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128746	chr5	-	2184	8	FSM	ENSMUSG00000023452.20	ENSMUST00000061895.16	2183	8	0	-1	0	1	multi-exon	FALSE	canonical	3	685	junction_2	53.5235976948867	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTAGCTTTGTATTTTGTTG	NA	False	NA	NA	False	ATTAAA	-20	NA	32942990	32893643	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32922116_32922293_32931739_32931811_32942892
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128758	chr5	-	2088	7	FSM	ENSMUSG00000023452.20	ENSMUST00000142957.6	2084	7	14	-18	1	1	multi-exon	FALSE	canonical	3	16	junction_6	252.221904062452	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCGTAGCTTTGTATTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	32942969	32893647	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32922116_32922293_32942892
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128761	chr5	-	2374	7	NIC	ENSMUSG00000023452.20	novel	2183	8	NA	NA	2	1	intron_retention	FALSE	canonical	3	685	junction_2	55.9833804703582	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCGTAGCTTTGTATTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	32942968	32893647	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896718_32922116_32922293_32931739_32931811_32942892
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128769	chr5	-	9830	10	NIC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	7	-5	combination_of_known_splicesites	FALSE	canonical	3	86	junction_9	19.7821468332771	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATTGTCAAGGCTATTT	7060	False	NA	0	True	AATAAA	-21	NA	33011593	32947168	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33011436
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128778	chr5	+	231	1	Intergenic	novelGene_3979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTAGCTACAAATTGGGA	NA	False	NA	NA	False	NA	NA	NA	32964106	32964337	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_32964100_32964300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128788	chr5	+	203	1	Intergenic	novelGene_3980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAAATCTTCAAGTGCT	2536	False	NA	NA	False	NA	NA	NA	32981679	32981882	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_32981700_32981900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128794	chr5	+	190	1	Intergenic	novelGene_3981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATATGTGCCCTACCACC	NA	False	NA	NA	False	NA	NA	NA	33012849	33013039	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_33012800_33013000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128804	chr5	+	5466	44	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	0	9	combination_of_known_junctions	TRUE	canonical	2	7	junction_1	36.5368450911651	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2005	False	NA	16	True	AATAAA	-17	NA	33021056	33149014	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_33021088_33021501_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128827	chr5	+	1810	2	FSM	ENSMUSG00000018965.12	ENSMUST00000019109.8	1764	2	-46	0	-46	0	multi-exon	FALSE	canonical	3	1727	junction_1	0	579	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGCCTGGCCTTGATTT	NA	False	NA	9	True	AATAAA	-20	NA	33176113	33185310	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_33176499_33183885
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128839	chr5	-	179	1	Intergenic	novelGene_3982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	265	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAATGCACTATCTC	NA	False	NA	1	True	NA	NA	NA	33191147	33190968	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_33191000_33191100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128844	chr5	-	187	1	Intergenic	novelGene_3983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGATCCATCACCT	NA	False	NA	NA	False	NA	NA	NA	33254707	33254520	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_33254500_33254700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128848	chr5	+	216	1	Intergenic	novelGene_3984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCGCCACCTCAGCCTG	NA	False	NA	NA	False	NA	NA	NA	33356381	33356597	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_33356400_33356600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128857	chr5	-	2274	9	NIC	ENSMUSG00000037373.13	novel	2436	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	123	junction_8	298.867759218019	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGGCACCAGTTTTAAT	NA	False	NA	-14	True	AATAAA	-21	NA	33432336	33405066	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_33406028_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33432122
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128863	chr5	-	2600	10	FSM	ENSMUSG00000037373.13	ENSMUST00000202868.4	2436	10	-133	-31	-131	0	multi-exon	FALSE	canonical	3	226	junction_1	199.225041809384	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGGCACCAGTTTTAAT	NA	False	NA	-14	True	AATAAA	-21	NA	33432469	33405066	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_33406028_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33432122
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128869	chr5	-	2277	9	FSM	ENSMUSG00000037373.13	ENSMUST00000079746.10	2279	9	2	0	0	0	multi-exon	FALSE	canonical	3	123	junction_8	242.929741643546	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGGCACCAGTTTTAAT	NA	False	NA	-14	True	AATAAA	-21	NA	33432336	33405066	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_33406031_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33432122
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128872	chr5	-	2603	10	NIC	ENSMUSG00000037373.13	novel	2436	10	NA	NA	-131	0	combination_of_known_junctions	FALSE	canonical	3	693	junction_8	73.9275588033129	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGGCACCAGTTTTAAT	NA	False	NA	-14	True	AATAAA	-21	NA	33432469	33405066	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_33406031_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33432122
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128880	chr5	-	3126	9	NIC	ENSMUSG00000037373.13	novel	2436	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	693	junction_7	78.351372036487	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGGCACCAGTTTTAAT	NA	False	NA	-14	True	AATAAA	-21	NA	33432336	33405066	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_33406031_33406450_33406569_33406930_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33432122
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128895	chr5	+	194	1	Intergenic	novelGene_3985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGATGGCACTGGGCTT	NA	False	NA	NA	False	NA	NA	NA	33439561	33439755	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_33439600_33439800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128908	chr5	+	2146	9	FSM	ENSMUSG00000079562.8	ENSMUST00000114449.7	2193	9	45	2	-7	-2	multi-exon	FALSE	canonical	3	507	junction_4	39.7106723690244	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTGAGGTGTTTGT	NA	False	NA	18	True	AATAAA	-19	NA	33492897	33530638	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_33492990_33515783_33515967_33517695_33517900_33520038_33520162_33523065_33523143_33525981_33526091_33527774_33527909_33528957_33529154_33529610
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128922	chr5	+	176	1	Intergenic	novelGene_3986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	33749632	33749808	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_33749600_33749800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128934	chr5	-	2013	6	FSM	ENSMUSG00000037339.18	ENSMUST00000065119.15	2009	6	-8	4	-8	-4	multi-exon	FALSE	canonical	3	127	junction_2	26.6187903556867	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTAGATTCTTTTTG	NA	False	NA	-7	True	ATTAAA	-19	NA	33786987	33757694	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_33758225_33764807_33765572_33767775_33767831_33771946_33772179_33786196_33786322_33786680
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128970	chr5	+	195	1	Antisense	novelGene_ENSMUSG00000004642.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTGGAATCTTGGTTT	6691	False	NA	NA	False	NA	NA	NA	33806273	33806468	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr5_+_33806300_33806500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128982	chr5	-	2313	4	FSM	ENSMUSG00000019295.9	ENSMUST00000019439.9	2828	4	512	3	-5	0	multi-exon	FALSE	canonical	3	50	junction_3	8.99382504215469	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTACTTCATTTTGTTT	NA	False	NA	-2	True	AATAAA	-16	NA	33815248	33810562	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_33811959_33812056_33812217_33812666_33813142_33814966
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000128991	chr5	+	2652	15	FSM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	-460	-5	-2	2	multi-exon	FALSE	canonical	3	792	junction_7	83.9525193797308	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGTCCTGTTGTTTATA	NA	False	NA	37	True	ACTAAA	-25	NA	33815469	33829547	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129013	chr5	+	2384	14	ISM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	-1	0	-1	0	intron_retention	FALSE	canonical	3	792	junction_7	85.2006333837612	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAACCCAGGTCCTGTTGT	NA	False	NA	32	True	ACTAAA	-20	NA	33815928	33829542	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129028	chr5	-	174	1	Intergenic	novelGene_3987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATAAATAAATCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	33868744	33868570	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_33868600_33868700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129066	chr5	+	4694	23	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-26	0	combination_of_known_junctions	TRUE	canonical	3	39	junction_8	54.8431459815812	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCATGTGAAATGCTTTT	NA	False	NA	42	True	ATTAAA	-19	NA	33978042	34052839	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024920_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129071	chr5	+	4625	22	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	51.8276841421399	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCATGTGAAATGCTTTT	NA	False	NA	42	True	ATTAAA	-19	NA	33978044	34052839	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_33978222_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129104	chr5	-	1993	5	FSM	ENSMUSG00000079555.3	ENSMUST00000060049.8	2073	5	69	11	-6	-11	multi-exon	FALSE	canonical	3	397	junction_4	45.778679535347	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTACTATGCCTGCTGTG	9395	False	NA	-11	True	AATAAA	-40	NA	34326802	34311234	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_34311451_34320866_34321096_34323259_34323700_34324748_34325788_34326733
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129116	chr5	+	191	1	Intergenic	novelGene_3988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGATTTGGTTGTGTGGC	6332	False	NA	NA	False	NA	NA	NA	34416797	34416988	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_34416800_34417000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129123	chr5	+	178	1	Intergenic	novelGene_3989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCTTAAAAATACACTAAGA	7341	False	NA	NA	False	NA	NA	NA	34417806	34417984	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_34417800_34418000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129130	chr5	+	2908	8	FSM	ENSMUSG00000029110.14	ENSMUST00000030992.13	2895	8	-10	-3	-10	0	multi-exon	FALSE	canonical	0	0	junction_4	1003.41470052242	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCATTTATTCAGTTAT	NA	False	NA	28	True	AATAAA	-18	NA	34493713	34510783	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_34493829_34499865_34500024_34504118_34504246_34506007_34506088_34506893_34506904_34507255_34507416_34508133_34508183_34508574
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129136	chr5	+	2965	8	FSM	ENSMUSG00000029110.14	ENSMUST00000182709.8	3046	8	81	0	-10	0	multi-exon	FALSE	canonical	0	0	junction_4	927.964241042219	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCATTTATTCAGTTAT	NA	False	NA	28	True	AATAAA	-18	NA	34493713	34510783	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506088_34506893_34506904_34507255_34507416_34508133_34508183_34508574
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129153	chr5	+	2913	7	NIC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	-7	1	combination_of_known_splicesites	FALSE	canonical	3	1293	junction_4	355.934919144872	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTCATTTATTCAGTT	NA	False	NA	26	True	AATAAA	-16	NA	34493753	34510781	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506088_34507255_34507416_34508133_34508183_34508574
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129179	chr5	+	212	1	Intergenic	novelGene_3990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGAGGACCTGGGCTTAA	NA	False	NA	NA	False	NA	NA	NA	34523287	34523499	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_34523300_34523500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129188	chr5	+	5518	21	FSM	ENSMUSG00000037210.17	ENSMUST00000180376.8	5536	21	18	0	18	0	multi-exon	FALSE	canonical	3	34	junction_1	17.141980632354	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCAGTCTGGTTGCTTTC	1461	False	NA	16	True	AATACA	-15	NA	34527294	34643800	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_34527772_34567924_34568168_34577344_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129200	chr5	-	215	1	Intergenic	novelGene_3991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGGAAGGGGGAGTTG	NA	False	NA	NA	False	NA	NA	NA	34544256	34544041	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_34544000_34544300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129263	chr5	+	199	1	Intergenic	novelGene_3992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTACTTTTTCATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	34738579	34738778	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_34738600_34738800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129279	chr5	-	1732	13	FSM	ENSMUSG00000001082.13	ENSMUST00000114331.10	1754	13	23	-1	0	1	multi-exon	TRUE	canonical	3	36	junction_12	99.4937183946806	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCCGTCTTACTATTC	NA	False	NA	-3	True	AATAAA	-21	NA	34794533	34790988	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794442
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129295	chr5	-	2717	18	FSM	ENSMUSG00000036693.13	ENSMUST00000041364.13	2702	18	-11	-4	-11	4	multi-exon	FALSE	canonical	3	557	junction_10	61.2066102226557	237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGTGGTGTGTTGTAA	NA	False	NA	-1	True	AATAAA	-20	NA	34817503	34795875	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_34795996_34796234_34796391_34796528_34796648_34798213_34798362_34798666_34798827_34801269_34801424_34802056_34802159_34804505_34804642_34805735_34805822_34806680_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129319	chr5	+	241	1	Intergenic	novelGene_3993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTAATTGTGGAATCTGA	NA	False	NA	NA	False	NA	NA	NA	35383418	35383659	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_35383400_35383700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129324	chr5	+	212	1	Intergenic	novelGene_3994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGACAGAGTTTCTCTG	NA	False	NA	NA	False	NA	NA	NA	35699578	35699790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_35699600_35699800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129333	chr5	-	2787	11	FSM	ENSMUSG00000029097.12	ENSMUST00000030980.12	3790	11	0	1003	0	-1003	multi-exon	FALSE	canonical	3	72	junction_3	7.3	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGGCTTCACAGCATC	7626	False	NA	-3	True	AATAAA	-18	NA	35732414	35714549	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35728457_35730046_35730267_35731423_35731539_35731902
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129349	chr5	+	4101	19	FSM	ENSMUSG00000029098.18	ENSMUST00000114237.8	2956	19	49	-1194	-2	0	multi-exon	FALSE	canonical	3	8	junction_1	14.5314686197546	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGCTTTCTCCCCTGTG	NA	False	NA	24	True	AATAAA	-15	NA	35740443	35771145	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_35740664_35741219_35741320_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601_35765777_35766363_35766432_35767079_35767167_35769358
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129375	chr5	+	214	1	Intergenic	novelGene_3995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTATGAACACCCTCTCA	NA	False	NA	NA	False	AAAACA	-12	NA	35909492	35909706	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_35909500_35909700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129385	chr5	+	246	1	Intergenic	novelGene_3996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	754	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTAGCTAAGGATGTAGG	NA	False	NA	NA	False	NA	NA	NA	36028362	36028608	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_36028400_36028600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129398	chr5	-	162	1	Intergenic	novelGene_3997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCAGAGCAAGCTGGGCT	NA	False	NA	NA	False	NA	NA	NA	36072209	36072047	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_36072000_36072200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129401	chr5	+	994	4	FSM	ENSMUSG00000029198.4	ENSMUST00000031099.4	3528	4	155	2379	155	-2379	multi-exon	FALSE	canonical	3	2567	junction_1	75.3126815350509	342	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCACAGTCTACCTCTG	NA	False	NA	19	True	AATAAA	-20	NA	36622496	36629045	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_36622600_36626781_36626945_36627945_36628028_36628399
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129411	chr5	-	3793	2	FSM	ENSMUSG00000029196.10	ENSMUST00000031097.8	3791	2	-2	0	-2	0	multi-exon	FALSE	canonical	3	130	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTCTGTTTGCTTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	36641631	36631013	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_36634307_36641131
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129422	chr5	-	4585	14	FSM	ENSMUSG00000029192.18	ENSMUST00000031094.15	4590	14	5	0	-2	0	multi-exon	FALSE	canonical	3	20	junction_13	25.6258929704419	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACTGTGTACTTTGGT	8930	False	NA	0	True	AATAAA	-22	NA	36739736	36647947	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36700520_36700642_36728639_36729382_36739698
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129429	chr5	-	3833	12	FSM	ENSMUSG00000029192.18	ENSMUST00000171385.8	3884	12	48	3	-27	0	multi-exon	FALSE	canonical	3	47	junction_11	14.7609043598508	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTTCACTGTGTACTT	8832	False	NA	-4	True	AATAAA	-18	NA	36687919	36647951	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36687766
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129440	chr5	+	1471	1	Antisense	novelGene_ENSMUSG00000029192.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCTATAAAAAGCTCCGC	NA	False	NA	NA	False	NA	NA	NA	36687319	36688790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr5_+_36687300_36688800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129452	chr5	-	6709	9	FSM	ENSMUSG00000029190.20	ENSMUST00000031091.13	6677	9	-32	0	1	0	multi-exon	FALSE	canonical	2	71	junction_5	5.18260311040697	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTGTTTTTATTTAT	NA	False	NA	45	True	AATAAA	-13	NA	36853313	36757828	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_36760148_36761854_36761953_36765281_36765391_36770589_36773879_36776086_36776169_36777007_36777075_36787000_36787136_36830091_36830587_36853198
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129460	chr5	+	180	1	Intergenic	novelGene_3998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAAAAAGTTTTCTATAA	NA	False	NA	NA	False	NA	NA	NA	36890428	36890608	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_36890400_36890600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129466	chr5	-	1301	1	FSM	ENSMUSG00000060708.5	ENSMUST00000071949.5	1273	1	-23	-5	-23	5	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTCTGGAGATTATTT	NA	False	NA	1	True	ATTAAA	-24	NA	36906017	36904716	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_36904700_36906000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129483	chr5	-	1611	2	FSM	ENSMUSG00000055302.6	ENSMUST00000068795.4	1648	2	-5	42	-5	-42	multi-exon	FALSE	canonical	3	1678	junction_1	0	546	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCGGAGAGTTACTAAGAA	NA	False	NA	-1	True	AATAAA	-26	NA	36954121	36952252	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_36953289_36953546
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129500	chr5	+	195	1	Intergenic	novelGene_3999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAACGCAGCATGCCAGG	NA	False	NA	NA	False	NA	NA	NA	36969645	36969840	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_36969600_36969800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129504	chr5	+	4140	9	FSM	ENSMUSG00000029120.11	ENSMUST00000031003.11	4088	9	-52	0	-52	0	multi-exon	TRUE	canonical	3	174	junction_3	14.0890028036054	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGGCTCGCAAGGCTGC	NA	False	NA	9	True	AATAAA	-21	NA	37025804	37112422	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_37026235_37080311_37080410_37083628_37083795_37084874_37084988_37088579_37088758_37097440_37097606_37104411_37104582_37106896_37106989_37109694
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129517	chr5	-	165	1	Intergenic	novelGene_4000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGAGTTCTAGGCAAAAG	NA	False	NA	NA	False	NA	NA	NA	37048747	37048582	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_37048600_37048700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129522	chr5	-	165	1	Intergenic	novelGene_4001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGTGAGCAAGCGGAGTT	NA	False	NA	NA	False	NA	NA	NA	37059218	37059053	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_37059100_37059200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129529	chr5	-	3568	8	FSM	ENSMUSG00000039474.14	ENSMUST00000043964.13	3787	8	219	0	-53	0	multi-exon	FALSE	canonical	3	110	junction_7	10.259888211986	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGCCTTCTGGTTTGAT	NA	False	NA	1	True	AATAAA	-18	NA	37146330	37123447	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_37126023_37128901_37129054_37130529_37130611_37131077_37131249_37132814_37132960_37134227_37134311_37139401_37139642_37146209
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129541	chr5	+	2560	13	NIC	ENSMUSG00000063646.19	novel	2496	20	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	99	junction_1	26.6327909832138	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTTTTTTATTTGTG	NA	False	NA	17	True	AATAAA	-20	NA	37185647	37282643	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_37185944_37242579_37242843_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129552	chr5	+	2095	12	Fusion	ENSMUSG00000063646.19_ENSMUSG00000113373.2	novel	516	2	NA	NA	2843	0	multi-exon	FALSE	canonical	3	13	junction_1	47.5912346954217	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTTTTTTATTTGTG	3224	False	NA	17	True	AATAAA	-20	NA	37245556	37282643	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr5_+_37245651_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129563	chr5	+	2017	11	ISM	ENSMUSG00000063646.19	ENSMUST00000121010.9	2496	20	5741	22702	31	0	internal_fragment	FALSE	canonical	3	147	junction_1	11.74265728019	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTTTTTTATTTGTG	2511	False	NA	17	True	AATAAA	-20	NA	37248454	37282643	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr5_+_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129570	chr5	+	4079	20	FSM	ENSMUSG00000050248.12	ENSMUST00000056365.9	4091	20	12	0	12	0	multi-exon	FALSE	canonical	3	11	junction_14	7.49034466215639	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATAAGAGTGGACCTCAT	8854	False	NA	3	True	CATAAA	-19	NA	37495854	37582399	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_37496072_37504783_37504853_37505931_37506119_37507682_37507793_37508464_37508519_37514743_37514879_37520860_37521001_37527867_37528193_37535526_37535767_37537753_37537930_37540421_37540582_37544028_37544484_37549336_37549542_37550423_37550541_37567577_37567806_37573070_37573292_37574748_37574837_37576467_37576671_37579181_37579284_37581752
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129574	chr5	+	240	1	Intergenic	novelGene_4002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCAGGCTTTCTTCCATT	NA	False	NA	NA	False	AAAAAG	-39	NA	37622525	37622765	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_37622500_37622800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129582	chr5	-	197	1	Intergenic	novelGene_4003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAATAATAATTGTTTT	NA	False	NA	NA	False	NA	NA	NA	37947216	37947019	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_37947000_37947200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129584	chr5	-	1931	2	FSM	ENSMUSG00000048450.11	ENSMUST00000063116.10	1935	2	1	3	0	-3	multi-exon	FALSE	canonical	2	10	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTCTGTGGGTTTAGTT	NA	False	NA	NA	False	AATAAA	-22	NA	37981926	37977831	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_37979045_37981208
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129588	chr5	+	193	1	Intergenic	novelGene_4004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAGACCAGCATCAT	NA	False	NA	NA	False	NA	NA	NA	38034564	38034757	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_38034600_38034800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129600	chr5	+	211	1	Intergenic	novelGene_4005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTAAACTAGGAAGTCATT	NA	False	NA	NA	False	NA	NA	NA	38075964	38076175	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_38076000_38076200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129625	chr5	+	1564	9	FSM	ENSMUSG00000067367.10	ENSMUST00000087514.9	1563	9	-1	0	-1	0	multi-exon	FALSE	canonical	3	2026	junction_5	151.553981719386	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATGATAACAAATTCTTG	NA	False	NA	23	True	AATAAA	-24	NA	38377812	38391650	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_38377980_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129628	chr5	+	1657	10	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	190	junction_2	843.03156656333	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATGATAACAAATTCTTG	NA	False	NA	23	True	AATAAA	-24	NA	38377813	38391650	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_38377980_38380477_38380572_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129640	chr5	+	1621	10	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	182	junction_2	844.746612604142	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATGATAACAAATTCTTG	NA	False	NA	23	True	AATAAA	-24	NA	38377853	38391650	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_38377980_38380477_38380576_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129646	chr5	+	1390	8	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	29	junction_2	791.240204504605	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTATGATAACAAATTCT	NA	False	NA	21	True	AATAAA	-22	NA	38377869	38391648	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_38377980_38381970_38382142_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129649	chr5	+	5486	8	NIC	ENSMUSG00000067367.10	novel	1504	9	NA	NA	2	3	intron_retention	FALSE	canonical	3	2026	junction_4	139.690912447475	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGTATCTATGATAACAA	NA	False	NA	16	True	AATAAA	-17	NA	38377874	38391643	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129663	chr5	+	148	1	Intergenic	novelGene_4006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAGGAAAACTCTAGAG	NA	False	NA	NA	False	NA	NA	NA	38593285	38593433	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_38593300_38593400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129672	chr5	-	6791	3	FSM	ENSMUSG00000046572.11	ENSMUST00000179555.8	6816	3	27	-2	27	2	multi-exon	FALSE	canonical	3	222	junction_2	31	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTCTCTCATTTCGGACA	NA	False	NA	-1	True	AATAAA	-20	NA	38842142	38825824	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_38832197_38839827_38840126_38842021
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129706	chr5	-	1742	8	FSM	ENSMUSG00000029128.13	ENSMUST00000201422.4	1697	8	-43	-2	-7	2	multi-exon	FALSE	canonical	3	81	junction_2	195.851880725393	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGGGATTTTCATTTA	NA	False	NA	-2	True	AATAAA	-16	NA	41865507	41782316	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_41783206_41784329_41784425_41790515_41790594_41793148_41793253_41845063_41845194_41855732_41855822_41860780_41860878_41865247
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129723	chr5	+	183	1	Intergenic	novelGene_4007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAATAGGAAGTCTTCAT	NA	False	NA	NA	False	NA	NA	NA	43710066	43710249	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_43710100_43710200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129726	chr5	+	4971	35	NIC	ENSMUSG00000039765.16	novel	4512	34	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_9	5.72140097054418	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTAGTCTGTCTCCTC	NA	False	NA	NA	False	AATAAA	-19	NA	43829636	43898314	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_43829747_43831033_43831158_43838630_43838720_43839040_43839146_43840441_43840544_43841381_43841556_43842599_43842763_43845465_43845603_43846259_43846392_43852426_43852637_43853867_43853975_43857280_43857422_43860532_43860690_43861202_43861445_43863398_43863577_43864084_43864242_43866385_43866534_43867846_43867986_43869581_43869786_43871850_43871944_43873095_43873188_43875894_43876063_43877682_43877789_43879730_43879841_43881042_43881140_43881615_43881715_43883537_43883715_43887198_43887403_43889719_43889810_43891169_43891284_43892657_43892793_43893375_43893499_43894837_43894897_43896639_43896818_43898007
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129755	chr5	+	2826	8	FSM	ENSMUSG00000029084.6	ENSMUST00000030964.6	3270	8	254	190	-53	-190	multi-exon	FALSE	canonical	3	162	junction_4	17.0353773551587	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTGCTTGGTTTATTGA	NA	False	NA	17	True	AATAAA	-22	NA	44026148	44069527	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_44026463_44057674_44057805_44058762_44058899_44060936_44061023_44063505_44063580_44064854_44064948_44065264_44065352_44067621
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129791	chr5	-	1384	7	FSM	ENSMUSG00000015806.13	ENSMUST00000015950.12	1380	7	-1	-3	-1	3	multi-exon	FALSE	canonical	3	819	junction_4	94.8542741964395	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTTTTTCACTCAAGT	NA	False	NA	-16	True	AATAAA	-18	NA	45607579	45591391	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45607348
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129814	chr5	+	2224	4	FSM	ENSMUSG00000015804.15	ENSMUST00000156481.8	4560	4	59	2277	-7	1362	multi-exon	FALSE	canonical	3	1736	junction_3	82.366390124991	355	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGAGGATGGTGGAAATA	7391	False	NA	NA	False	AATAAA	-31	NA	45677629	45684341	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_45677827_45679777_45679845_45680763_45680877_45682494
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129826	chr5	+	4345	21	FSM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	-39	-603	-39	603	multi-exon	FALSE	canonical	3	453	junction_14	43.4953733171702	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGGTGTGTGTGTGTGT	NA	False	NA	6	True	AATACA	-29	NA	45827221	45858491	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129843	chr5	+	7721	36	FSM	ENSMUSG00000031558.16	ENSMUST00000173107.8	9960	36	17	2222	1	0	multi-exon	TRUE	canonical	3	71	junction_14	20.9676913758442	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCCCACGTTAACCTGT	NA	False	NA	16	True	AATAAA	-18	NA	48140496	48462853	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129845	chr5	+	7745	37	NIC	ENSMUSG00000031558.16	novel	7758	38	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_15	20.6287548022501	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCCCACGTTAACCTGT	NA	False	NA	16	True	AATAAA	-18	NA	48140496	48462853	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48378308_48378333_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129864	chr5	+	1550	9	FSM	ENSMUSG00000029089.9	ENSMUST00000030968.7	1616	9	66	0	-38	0	multi-exon	FALSE	canonical	3	77	junction_5	8.92941067484299	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTAGTTCTACATATAT	NA	False	NA	13	True	ATTAAA	-21	NA	48529736	48546187	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_48529838_48531521_48531590_48531725_48531881_48532884_48532953_48534416_48534508_48536671_48536807_48537465_48537574_48539128_48539210_48545444
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129866	chr5	+	232	1	Intergenic	novelGene_4008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGTAAGAGGAAAAGGCCA	NA	False	NA	NA	False	NA	NA	NA	50096223	50096455	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_50096200_50096500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129885	chr5	+	194	1	Intergenic	novelGene_4009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTATTGTGACATTTGC	NA	False	NA	NA	False	NA	NA	NA	52112129	52112323	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_52112100_52112300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129897	chr5	-	3036	14	FSM	ENSMUSG00000029169.12	ENSMUST00000031061.12	3010	14	-26	0	-26	0	multi-exon	FALSE	canonical	3	749	junction_10	48.0023421519305	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTCTGTATCTTTTATT	NA	False	NA	2	True	AATAAA	-27	NA	52347882	52307544	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129913	chr5	-	2993	14	FSM	ENSMUSG00000029169.12	ENSMUST00000200186.5	2375	14	-139	-479	-2	-11	multi-exon	FALSE	canonical	3	57	junction_4	209.215072940651	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGCCCAAGTCCTTCTG	NA	False	NA	-9	True	AATAAA	-16	NA	52347858	52307555	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52314912_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129920	chr5	+	1686	1	Intergenic	novelGene_4010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCCTTTATTTTCAAGTC	NA	False	NA	NA	False	TTTAAA	-26	NA	52335331	52337017	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_52335300_52337000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129924	chr5	-	2007	8	FSM	ENSMUSG00000039252.12	ENSMUST00000199942.5	6273	8	-79	4345	-79	-4345	multi-exon	FALSE	canonical	3	32	junction_6	6.36636570147348	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGCTCAGAGCTCTGAA	NA	False	NA	NA	False	NA	NA	NA	52723724	52695203	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_52696123_52703794_52703960_52711744_52711915_52713003_52713076_52717504_52717577_52719467_52719540_52721307_52721380_52723259
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129933	chr5	-	193	1	Intergenic	novelGene_4011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTTGATGCCACCTGAC	NA	False	NA	NA	False	NA	NA	NA	52751544	52751351	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_52751400_52751500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129938	chr5	-	5253	11	FSM	ENSMUSG00000029173.13	ENSMUST00000031069.13	5252	11	1	-2	1	2	multi-exon	FALSE	canonical	3	65	junction_1	10.2493902257647	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAAGTCTTCTTGCACTCT	NA	False	NA	26	True	AATAAA	-43	NA	52827049	52797426	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_52801450_52804457_52804549_52804939_52805034_52813355_52813448_52813567_52813698_52817971_52818075_52821509_52821664_52822577_52822737_52823329_52823449_52826240_52826396_52826916
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129954	chr5	+	2989	9	NIC	ENSMUSG00000029186.13	novel	3139	10	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	45.8023948609677	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCATTGTTCTGTGTATT	NA	False	NA	7	True	AATAAA	-16	NA	52898928	52926682	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_52899311_52907949_52908151_52908763_52908896_52910437_52910592_52911978_52912047_52914207_52914308_52918215_52918350_52919773_52919834_52924924
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129955	chr5	+	3132	10	FSM	ENSMUSG00000029186.13	ENSMUST00000031081.11	3139	10	13	-6	13	6	multi-exon	FALSE	canonical	3	134	junction_2	14.8099065943487	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCTGTGTATTGAATGT	NA	False	NA	13	True	AATAAA	-22	NA	52898928	52926688	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_52899311_52905710_52905848_52907949_52908151_52908763_52908896_52910437_52910592_52911978_52912047_52914207_52914308_52918215_52918350_52919773_52919834_52924924
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129965	chr5	+	2472	13	FSM	ENSMUSG00000029179.15	ENSMUST00000113904.9	2485	13	13	0	13	0	multi-exon	FALSE	canonical	3	81	junction_12	14.4327944472148	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTCAGTTGTTATTCC	NA	False	NA	21	True	ATTAAA	-17	NA	52940408	52982007	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923_52954002_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462_52976608_52980959
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129980	chr5	+	2785	28	FSM	ENSMUSG00000029176.14	ENSMUST00000031072.14	3854	28	14	1055	14	0	multi-exon	FALSE	canonical	3	314	junction_6	48.5716418249863	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGTTCCATCCTTGTG	NA	False	NA	21	True	AATAAA	-21	NA	52991367	53024084	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129992	chr5	+	909	3	FSM	ENSMUSG00000061461.12	ENSMUST00000147148.5	922	3	13	0	13	0	multi-exon	FALSE	canonical	3	318	junction_1	5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTGGTGTGTACTGTT	3420	False	NA	13	True	ATTAAA	-14	NA	53424492	53435882	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_53424701_53434484_53434542_53435238
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000129997	chr5	+	220	1	Intergenic	novelGene_4012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGCATTGTTGAGATTAG	NA	False	NA	NA	False	ATTAAA	-14	NA	53663863	53664083	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_53663900_53664100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130006	chr5	+	5310	11	FSM	ENSMUSG00000039191.13	ENSMUST00000087360.9	5252	11	-55	-3	-55	-1	multi-exon	FALSE	canonical	3	64	junction_1	131.697532247191	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGATGTCTTCTGTGGG	NA	False	NA	15	True	AATAAA	-21	NA	53713120	53814703	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_53713246_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130018	chr5	+	5439	11	FSM	ENSMUSG00000039191.13	ENSMUST00000113865.5	5440	11	2	-1	2	1	multi-exon	FALSE	canonical	3	158	junction_1	104.823470654239	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTCTGTGGGAT	NA	False	NA	17	True	AATAAA	-23	NA	53747814	53814705	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_53748067_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130031	chr5	+	189	1	Intergenic	novelGene_4013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATAAAAGAGACACTGCA	NA	False	NA	NA	False	NA	NA	NA	53824305	53824494	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_53824300_53824500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130034	chr5	+	1826	21	FSM	ENSMUSG00000039178.10	ENSMUST00000037337.10	2273	21	17	430	-4	-203	multi-exon	FALSE	canonical	3	62	junction_3	8.96994983263563	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAGAAGTTTTCACTTTT	NA	False	NA	11	True	AATAAA	-25	NA	53966985	54060877	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_53967201_53986691_53986765_53987796_53987843_53990311_53990388_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032274_54041003_54041037_54044695_54044806_54046657_54046750_54054332_54054449_54058918_54058990_54060673
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130045	chr5	+	3781	12	FSM	ENSMUSG00000039156.20	ENSMUST00000117661.9	4934	12	30	1123	30	0	multi-exon	TRUE	canonical	3	168	junction_8	27.7566163655824	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTGTTGAATGAGTTTG	NA	False	NA	NA	False	TATAAA	-16	NA	54155870	54277276	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_54156377_54210717_54210849_54232621_54232737_54259916_54260029_54260914_54261031_54261734_54261913_54262562_54262741_54267044_54267213_54267878_54267980_54268213_54268453_54273260_54273535_54275613
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130050	chr5	+	192	1	Intergenic	novelGene_4014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATTGAGACATGAGTAAA	NA	False	NA	NA	False	NA	NA	NA	63770973	63771165	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_63771000_63771200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130055	chr5	+	198	1	Intergenic	novelGene_4015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTTAGTGCGATGTATT	NA	False	NA	NA	False	NA	NA	NA	63803304	63803502	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_63803300_63803500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130079	chr5	+	2392	14	FSM	ENSMUSG00000029171.13	ENSMUST00000087324.7	2369	14	-19	-4	-19	4	multi-exon	FALSE	canonical	3	609	junction_6	76.13589532023	617	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGTTTATTTTTTTTAAC	NA	False	NA	NA	False	AATAAA	-19	NA	64250273	64285698	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_64250432_64254321_64254490_64258289_64258397_64260196_64260282_64260719_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64273642_64273777_64285119
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130091	chr5	+	4866	19	FSM	ENSMUSG00000029174.19	ENSMUST00000119756.6	4760	19	-106	0	-106	0	multi-exon	FALSE	canonical	3	216	junction_12	24.8002513925928	303	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTCGTGTTGTCTGTTTT	8410	False	NA	10	True	AATAAA	-20	NA	64387635	64508829	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_64387874_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130115	chr5	+	1089	4	FSM	ENSMUSG00000029178.15	ENSMUST00000200587.5	1026	4	-60	-3	-60	3	multi-exon	FALSE	canonical	3	600	junction_1	49.9266128098699	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGCTGTGGATGGCCGC	NA	False	NA	21	True	AATAAA	-21	NA	64960859	64980455	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130116	chr5	+	5099	6	FSM	ENSMUSG00000029178.15	ENSMUST00000165536.8	5221	6	129	-7	-60	7	multi-exon	FALSE	canonical	3	286	junction_4	186.681547025945	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTGATTACTATAGGTA	NA	False	NA	15	True	AATAAA	-23	NA	64960859	64990251	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221_64980373_64984452_64984614_64986319
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130148	chr5	+	150	1	Intergenic	novelGene_4016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAATCCTCTACTTA	NA	False	NA	NA	False	AATAAA	-6	NA	65317342	65317492	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_65317300_65317500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130173	chr5	-	4753	25	FSM	ENSMUSG00000029191.17	ENSMUST00000204965.3	4751	25	-2	0	-2	0	multi-exon	FALSE	canonical	3	270	junction_12	80.615847887097	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTACTGAGTCTTGCCCCT	NA	False	NA	-4	True	AATAAA	-19	NA	65493015	65419194	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130178	chr5	-	4751	25	FSM	ENSMUSG00000029191.17	ENSMUST00000172732.8	4699	25	-52	0	-3	0	multi-exon	FALSE	canonical	3	281	junction_12	79.0184138174275	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTACTGAGTCTTGCCCCT	NA	False	NA	-4	True	AATAAA	-19	NA	65493016	65419194	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130185	chr5	-	4757	25	FSM	ENSMUSG00000029191.17	ENSMUST00000203471.3	3952	25	-55	-750	-3	0	multi-exon	FALSE	canonical	3	185	junction_1	103.759328563213	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTACTGAGTCTTGCCCCT	NA	False	NA	-4	True	AATAAA	-19	NA	65493016	65419194	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130187	chr5	-	4726	25	NIC	ENSMUSG00000029191.17	novel	4699	25	NA	NA	-24	0	combination_of_known_junctions	TRUE	canonical	3	185	junction_1	102.558519880115	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTACTGAGTCTTGCCCCT	-1	True	NA	-4	True	AATAAA	-19	NA	65492988	65419194	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130201	chr5	+	201	1	Intergenic	novelGene_4017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATAAATATAATTTTTA	NA	False	NA	NA	False	NA	NA	NA	65489911	65490112	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_65489900_65490100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130209	chr5	+	2688	4	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	23571	0	23477	0	3prime_fragment	FALSE	canonical	3	98	junction_2	21.6024689946929	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTCTTAGACTTCG	NA	False	NA	24	True	AAAAAG	-6	NA	65529227	65541350	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr5_+_65529804_65533022_65533292_65536270_65537415_65540651
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130230	chr5	-	814	7	FSM	ENSMUSG00000047215.15	ENSMUST00000120094.5	680	7	-20	-114	-1	0	multi-exon	FALSE	canonical	3	5084	junction_6	3284.20622914511	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548743	65545706	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130240	chr5	+	2854	11	FSM	ENSMUSG00000029199.12	ENSMUST00000122026.6	1668	11	37	-1223	-6	-263	multi-exon	FALSE	canonical	3	315	junction_10	33.1264244976726	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATGTGTGTTATCTTA	6923	False	NA	NA	False	TTTAAA	-24	NA	65548876	65567773	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_65549017_65549562_65549733_65551283_65551378_65552707_65552789_65554945_65555103_65555173_65555232_65557189_65557319_65559953_65560100_65561510_65561582_65562672_65562785_65566077
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130252	chr5	-	2518	12	FSM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	46	-14	46	14	multi-exon	FALSE	canonical	3	385	junction_10	43.2746370854342	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATGTTTTATGTTCATAT	NA	False	NA	1	True	AATAAA	-36	NA	65593246	65570549	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853_65574988_65575820_65575952_65577591_65577687_65579977_65580126_65580503_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65592966
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130263	chr5	-	2314	12	NIC	ENSMUSG00000029201.15	novel	2550	12	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_11	127.934900801053	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTTCAATTTACGTATG	NA	False	NA	-13	True	AATAAA	-22	NA	65585746	65570563	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853_65574988_65575820_65575952_65577591_65577687_65579977_65580126_65580503_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65585656
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130268	chr5	+	193	1	Intergenic	novelGene_4018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAGAAAATCTGGCATAG	3954	False	NA	NA	False	NA	NA	NA	65582966	65583159	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_65583000_65583200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130306	chr5	-	176	1	Intergenic	novelGene_4019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTAAAAAAAAAAGTTAGG	5105	False	NA	NA	False	NA	NA	NA	65747058	65746882	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_65746900_65747100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130309	chr5	-	6948	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	37	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	110.837996749479	47	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTGGAAACGTGAATA	2678	False	NA	NA	False	AATAAA	-24	NA	65855579	65765115	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_-_65767539_65772606_65772948_65776286_65776399_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130339	chr5	+	201	1	Intergenic	novelGene_4020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAGCTCTCTTTAGTAAA	NA	False	NA	NA	False	NA	NA	NA	65841822	65842023	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_65841800_65842000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130342	chr5	-	253	1	Intergenic	novelGene_4021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAATAAAAAAATTT	NA	False	NA	NA	False	AAAAAG	-14	NA	65874638	65874385	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_65874400_65874600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130350	chr5	-	194	1	Intergenic	novelGene_4022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAGCAAGCTTTAAAAAA	4965	False	NA	NA	False	NA	NA	NA	65924286	65924092	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_65924100_65924300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130358	chr5	-	186	2	Antisense	novelGene_ENSMUSG00000106682.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	19	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAGACAAGCCAGGGCTA	NA	False	NA	NA	False	NA	NA	NA	65961574	65931277	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr5_-_65931415_65961525
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130362	chr5	+	195	1	Intergenic	novelGene_4023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAGCTTAAGTTCTAATG	7099	False	NA	NA	False	NA	NA	NA	65983082	65983277	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_65983100_65983300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130369	chr5	-	216	1	Intergenic	novelGene_4024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTATTATGTAAACAATG	9903	False	NA	NA	False	NA	NA	NA	66141030	66140814	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_66140800_66141000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130380	chr5	+	194	1	Antisense	novelGene_ENSMUSG00000107304.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACACACCCCATAATAAAT	NA	False	NA	NA	False	NA	NA	NA	66228643	66228837	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr5_+_66228600_66228800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130388	chr5	-	184	1	Intergenic	novelGene_4025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAATAATTCATG	NA	False	NA	NA	False	NA	NA	NA	66388861	66388677	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_66388700_66388900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130392	chr5	-	189	1	Intergenic	novelGene_4026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAGCAGCTACTATAA	9640	False	NA	-1	True	NA	NA	NA	66407222	66407033	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_66407000_66407200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130401	chr5	+	201	1	Intergenic	novelGene_4027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATAGAGGAAGAGAAACAC	NA	False	NA	NA	False	NA	NA	NA	66420452	66420653	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_66420500_66420700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130415	chr5	-	182	1	Intergenic	novelGene_4028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACTTATTAAGAAAAGAATA	1074	False	NA	NA	False	NA	NA	NA	66593974	66593792	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_66593800_66594000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130419	chr5	+	1029	9	FSM	ENSMUSG00000029223.13	ENSMUST00000031131.11	1177	9	148	0	-3	0	multi-exon	FALSE	canonical	3	449	junction_4	35.1227757302865	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTTTTTATTTTCTCTT	NA	False	NA	33	True	AATAAA	-22	NA	66833581	66844577	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_66833666_66833778_66833791_66834286_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130421	chr5	+	1522	8	NIC	ENSMUSG00000029223.13	novel	1177	9	NA	NA	-3	2	intron_retention	FALSE	canonical	3	449	junction_3	34.4211610282194	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTGGTTTTTATTTTCT	NA	False	NA	30	True	AATAAA	-19	NA	66833581	66844574	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_66833666_66833778_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130438	chr5	+	2445	8	FSM	ENSMUSG00000037720.17	ENSMUST00000037918.12	6247	8	103	3699	17	1103	multi-exon	FALSE	canonical	3	347	junction_1	43.3504937240909	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTTCTAATGATGTTTT	NA	False	NA	19	True	AATAAA	-26	NA	67418010	67445105	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130452	chr5	+	3054	18	FSM	ENSMUSG00000029221.16	ENSMUST00000162372.8	5711	18	0	2657	0	0	multi-exon	FALSE	canonical	3	203	junction_11	79.5528159088737	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACGGTAGTTTTCAATC	386	False	NA	15	True	AATAAA	-18	NA	67464297	67513129	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67499573_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130473	chr5	-	8007	6	NIC	ENSMUSG00000092060.5	novel	8268	6	NA	NA	190	0	combination_of_known_junctions	TRUE	canonical	3	39	junction_5	22.3374125627835	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTGACTTGATTTTTT	NA	False	NA	-6	True	AATAAA	-19	NA	67585463	67549490	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_67555794_67557474_67557645_67562773_67562863_67574798_67575366_67584408_67585136_67585312
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130480	chr5	-	289	1	Intergenic	novelGene_4029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTAGCTCTATTGTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	67591840	67591551	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_67591600_67591800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130490	chr5	-	7110	36	FSM	ENSMUSG00000037685.16	ENSMUST00000135930.8	8069	36	-62	1021	-1	0	multi-exon	TRUE	canonical	3	27	junction_2	10.9452813428194	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATACTTTGCTGTGTTTT	NA	False	NA	-5	True	AATAAA	-18	NA	68004775	67776503	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_67780040_67781352_67781445_67788033_67788127_67788829_67788919_67805035_67805144_67805867_67805925_67808930_67808993_67813248_67813328_67817212_67817336_67817436_67817512_67824663_67824775_67824866_67825051_67840100_67840274_67860322_67860388_67863248_67863388_67887134_67887275_67889511_67889597_67895755_67895826_67902922_67902973_67904620_67904704_67906393_67906500_67908355_67908429_67918456_67918546_67919858_67919937_67922206_67922335_67924362_67924529_67926394_67926507_67932065_67932194_67933471_67933542_67938330_67938405_67943968_67944010_67962999_67963046_67969430_67969530_67970434_67970535_67971951_67972067_68004504
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130498	chr5	-	192	1	Intergenic	novelGene_4030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAGAATTTACC	NA	False	NA	NA	False	NA	NA	NA	68009597	68009405	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_68009400_68009600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130505	chr5	-	191	1	Intergenic	novelGene_4031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATGAATAGTGT	NA	False	NA	NA	False	NA	NA	NA	69504837	69504646	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_69504600_69504800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130521	chr5	-	1850	7	FSM	ENSMUSG00000029209.16	ENSMUST00000031117.13	1894	7	47	-3	0	3	multi-exon	TRUE	canonical	3	104	junction_4	11.5998084275369	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTCATTTTCTTTCTAA	NA	False	NA	NA	False	AATAAA	-17	NA	69749636	69732340	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_69733297_69735320_69735496_69736850_69737036_69742316_69742500_69743807_69743910_69747003_69747167_69749550
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130534	chr5	-	3892	5	FSM	ENSMUSG00000029213.12	ENSMUST00000013693.11	3895	5	4	-1	4	1	multi-exon	FALSE	canonical	3	313	junction_3	25.4889682019496	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAGACTCATGGGTATTT	NA	False	NA	-3	True	NA	NA	NA	72325528	72313916	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_72317237_72318250_72318407_72320064_72320218_72322693_72322850_72325421
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130539	chr5	-	1523	5	NNC	ENSMUSG00000029213.12	novel	3895	5	NA	NA	22	3	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_4	141.390416931276	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGCTTGATTTCAGT	NA	False	NA	-1	True	AATACA	-17	NA	72325477	72316350	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_-_72317237_72318250_72318407_72320064_72320218_72322693_72322850_72325305
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130546	chr5	+	6066	23	FSM	ENSMUSG00000046808.18	ENSMUST00000126664.8	6052	23	-27	13	-27	0	multi-exon	TRUE	canonical	3	78	junction_3	13.360930461982	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCACTGGAAACTGTCAT	NA	False	NA	11	True	AATAAA	-16	NA	72360644	72456105	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_72360907_72384974_72385302_72387619_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72403567_72404159_72404288_72404395_72404649_72412253_72412490_72418266_72418456_72421345_72421956_72423313_72423418_72424749_72424877_72426614_72426800_72434421_72434729_72436727_72436805_72437386_72437513_72439447_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130555	chr5	-	221	1	Intergenic	novelGene_4032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTCTTAAGCTGTTTGA	NA	False	NA	NA	False	NA	NA	NA	72395978	72395757	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_72395800_72396000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130559	chr5	+	171	1	Intergenic	novelGene_4033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATGAAATGTCTT	NA	False	NA	NA	False	NA	NA	NA	72572760	72572931	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_72572800_72572900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130564	chr5	-	3719	23	FSM	ENSMUSG00000072889.10	ENSMUST00000087216.12	3712	23	-7	0	-7	0	multi-exon	FALSE	canonical	3	106	junction_22	12.1822421907212	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTGATAAAGGATATTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	72717034	72670643	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_72671675_72673554_72673609_72674368_72674456_72675537_72675643_72679490_72679561_72680851_72681019_72681429_72681571_72681989_72682012_72685501_72685594_72686354_72686515_72686726_72686848_72690387_72690479_72694708_72694832_72695492_72695618_72696948_72697064_72697636_72697738_72697834_72697997_72698196_72698376_72707634_72707766_72709985_72710096_72713514_72713689_72716356_72716612_72716931
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130588	chr5	-	226	1	Intergenic	novelGene_4034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAACAGAAGGTATACAATT	NA	False	NA	NA	False	NA	NA	NA	73078339	73078113	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_73078100_73078300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130598	chr5	+	187	1	Intergenic	novelGene_4035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTACTCTAAAAAGAAATGGA	NA	False	NA	NA	False	NA	NA	NA	73397233	73397420	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_73397200_73397400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130602	chr5	+	189	1	Intergenic	novelGene_4036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCTTTATTTTAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	73424376	73424565	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_73424400_73424600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130630	chr5	-	176	1	Intergenic	novelGene_4037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGTGACATCTAA	NA	False	NA	0	True	NA	NA	NA	73478321	73478145	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_73478100_73478300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130645	chr5	-	237	1	Intergenic	novelGene_4038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAGGAGACCCTTAGCT	NA	False	NA	NA	False	AATAAA	-23	NA	73637284	73637047	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_73637000_73637300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130693	chr5	-	4476	9	NIC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_8	53.0377224247045	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTTTGGCTCCTATTT	NA	False	NA	NA	False	ATTAAA	-26	NA	74226408	74159386	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74226307
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130706	chr5	+	193	1	Intergenic	novelGene_4039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGCTTCAAAAGTATATAAC	NA	False	NA	NA	False	NA	NA	NA	74240379	74240572	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_74240400_74240600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130713	chr5	+	533	3	FSM	ENSMUSG00000106943.3	ENSMUST00000120364.2	575	3	42	0	36	0	multi-exon	FALSE	canonical	3	72	junction_1	23.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTTCACTTGTTCTT	NA	False	NA	19	True	AATAAA	-21	NA	74253779	74254998	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_74253801_74254018_74254081_74254548
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130723	chr5	-	2392	9	FSM	ENSMUSG00000062110.15	ENSMUST00000072857.13	3672	9	7	1273	0	0	multi-exon	FALSE	canonical	3	48	junction_1	6.19979838381862	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCAAGCTGTCGCTAGC	NA	False	NA	-3	True	AATAAA	-25	NA	74692403	74366749	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_74367057_74372911_74373032_74385975_74386111_74397099_74397246_74558314_74558565_74623220_74623397_74642810_74642939_74680144_74680314_74691442
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130734	chr5	+	4650	17	FSM	ENSMUSG00000029227.16	ENSMUST00000080164.12	4673	17	23	0	1	0	multi-exon	FALSE	canonical	3	373	junction_9	134.520909155417	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGAAGTTTGGTCATTA	NA	False	NA	13	True	AATAAA	-22	NA	74696132	74759451	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130737	chr5	+	4731	17	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	1	0	intron_retention	FALSE	canonical	3	220	junction_12	176.742209428733	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGAAGTTTGGTCATTA	NA	False	NA	13	True	AATAAA	-22	NA	74696132	74759451	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130739	chr5	+	2121	18	FSM	ENSMUSG00000029227.16	ENSMUST00000113536.8	4769	18	1	2647	1	8	multi-exon	FALSE	canonical	3	259	junction_9	161.909389842069	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTCTTGTAATATTTA	NA	False	NA	30	True	AATAAA	-31	NA	74696132	74756814	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130784	chr5	-	202	1	Intergenic	novelGene_4040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTGCTACAACAGAACAAAA	NA	False	NA	NA	False	NA	NA	NA	74760778	74760576	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_74760600_74760800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130793	chr5	-	2111	6	FSM	ENSMUSG00000029229.9	ENSMUST00000075452.7	9699	6	146	7442	146	5750	multi-exon	FALSE	canonical	3	625	junction_4	34.4290574950869	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTAATTTATATACCT	NA	False	NA	-1	True	ATTAAA	-16	NA	75205289	75166090	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_75167425_75171891_75171952_75172113_75172171_75187728_75187885_75188021_75188077_75204840
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130796	chr5	+	1669	2	FSM	ENSMUSG00000035946.8	ENSMUST00000040477.4	1665	2	-9	5	-9	-5	multi-exon	FALSE	canonical	3	51	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTGGTACTTGTCCTTAT	NA	False	NA	NA	False	AATAAA	-25	NA	75236252	75238549	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_75236999_75237626
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130806	chr5	+	193	1	Intergenic	novelGene_4041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTCAGGAGGCAGTGAGT	NA	False	NA	NA	False	NA	NA	NA	75298009	75298202	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_75298000_75298200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130817	chr5	+	5199	21	FSM	ENSMUSG00000005672.13	ENSMUST00000144270.8	5241	21	46	-4	7	4	multi-exon	FALSE	canonical	3	795	junction_9	132.566766197264	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTTTGTTTTTTAA	773	False	NA	18	True	NA	NA	NA	75735621	75817386	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130825	chr5	+	5447	20	NIC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	39	0	intron_retention	FALSE	canonical	3	795	junction_9	134.334060793221	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTTTTCTGTTTGTTTT	805	False	NA	14	True	NA	NA	NA	75735653	75817382	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130826	chr5	+	4890	20	NIC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	39	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	295.923513364134	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTTTTCTGTTTGTTTT	805	False	NA	14	True	NA	NA	NA	75735653	75817382	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_75735779_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130854	chr5	+	1870	6	FSM	ENSMUSG00000029234.14	ENSMUST00000031144.14	1897	6	27	0	27	0	multi-exon	FALSE	canonical	3	1062	junction_3	75.4808585006821	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTCCTCGTGTGTTA	563	False	NA	7	True	AATAAA	-15	NA	76331753	76357092	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_76332200_76347191_76347418_76351953_76352130_76352483_76352664_76355648_76355755_76356356
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130872	chr5	+	3367	19	FSM	ENSMUSG00000036435.14	ENSMUST00000087133.11	3371	19	-3	7	-3	0	multi-exon	FALSE	canonical	3	86	junction_10	33.5248203611431	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGATAATATTCTTAAG	NA	False	NA	10	True	AATAAA	-20	NA	76677154	76718134	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697449_76701946_76702053_76705665_76705711_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130887	chr5	+	206	1	FSM	ENSMUSG00000036435.14	ENSMUST00000202151.2	2990	1	457	2327	457	-2327	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTGAAGCTAAGATTCT	NA	False	NA	NA	False	NA	NA	NA	76700949	76701155	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_76700900_76701200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130910	chr5	-	178	1	Intergenic	novelGene_4042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAAAGACGGT	NA	False	NA	NA	False	NA	NA	NA	77055401	77055223	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_77055200_77055400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130918	chr5	-	3938	11	FSM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	-8	51	-8	-51	multi-exon	FALSE	canonical	3	550	junction_6	47.121226639382	199	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATCTGATTTTTTAGG	NA	False	NA	-2	True	TATAAA	-20	NA	77099433	77061173	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130938	chr5	+	2053	10	NNC	ENSMUSG00000029247.18	novel	2482	9	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_1	1034.83093388649	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGCTGTGTGGTCTATA	293	False	NA	19	True	ATTAAA	-22	NA	77099160	77115356	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_+_77099190_77099615_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130940	chr5	+	2107	10	NNC	ENSMUSG00000029247.18	novel	1862	10	NA	NA	7	2	at_least_one_novel_splicesite	FALSE	canonical	3	185	junction_1	1259.86605206101	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTCGCTGTGTGGTCTA	293	False	NA	17	True	ATTAAA	-20	NA	77099160	77115354	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_+_77099249_77099615_77099683_77104395_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130943	chr5	+	2112	10	FSM	ENSMUSG00000029247.18	ENSMUST00000117536.8	1862	10	-54	-196	7	0	multi-exon	FALSE	canonical	3	185	junction_1	1007.72571224074	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGCTGTGTGGTCTATA	293	False	NA	19	True	ATTAAA	-22	NA	77099160	77115356	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_77099249_77099615_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130945	chr5	+	2114	10	NNC	ENSMUSG00000029247.18	novel	2345	10	NA	NA	7	2	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_1	1045.0028294604	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTCGCTGTGTGGTCTA	293	False	NA	17	True	ATTAAA	-20	NA	77099160	77115354	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_+_77099253_77099615_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130965	chr5	+	2447	9	FSM	ENSMUSG00000029247.18	ENSMUST00000031160.16	2482	9	39	-4	-2	0	multi-exon	FALSE	canonical	3	3017	junction_4	215.03720608304	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGCTGTGTGGTCTATA	325	False	NA	19	True	ATTAAA	-22	NA	77099192	77115356	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130982	chr5	+	2048	9	NNC	ENSMUSG00000029247.18	novel	2345	10	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	3	450	junction_1	967.654089796555	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGCTGTGTGGTCTATA	721	False	NA	19	True	ATTAAA	-22	NA	77099588	77115356	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_+_77099683_77104395_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130993	chr5	+	314	1	ISM	ENSMUSG00000029247.18	ENSMUST00000120912.8	2345	10	15846	2	1037	2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTCGCTGTGTGGTCTA	NA	False	NA	17	True	ATTAAA	-20	NA	77115040	77115354	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr5_+_77115000_77115400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000130996	chr5	+	3612	19	FSM	ENSMUSG00000036323.15	ENSMUST00000101087.10	3625	19	13	0	-11	0	multi-exon	FALSE	canonical	3	245	junction_6	28.4995126663987	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCGGTATTGGCATTTT	NA	False	NA	28	True	AATAAA	-36	NA	77122542	77147784	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_77122680_77124244_77124366_77126429_77126554_77128134_77128279_77128361_77128474_77130081_77130114_77131964_77132090_77132180_77132239_77135713_77135846_77137147_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143624_77143763_77144498_77144537_77145269_77145430_77146038
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131009	chr5	-	1085	3	FSM	ENSMUSG00000059325.15	ENSMUST00000113453.9	1113	3	28	0	4	0	multi-exon	FALSE	canonical	3	24	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGGAGTCTTTTTTTTT	3171	False	NA	-3	True	ATTAAA	-20	NA	77243096	77234834	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_77235664_77242712_77242870_77242997
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131017	chr5	-	238	1	Intergenic	novelGene_4043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATGATACAAAATATCACT	NA	False	NA	NA	False	AATACA	-39	NA	77289914	77289676	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_77289700_77289900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131021	chr5	+	210	1	Intergenic	novelGene_4044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAACAATGAGATGGCTT	NA	False	NA	NA	False	NA	NA	NA	77372712	77372922	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_77372700_77372900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131030	chr5	-	206	1	Intergenic	novelGene_4045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTGCATTTGTTTATTA	4235	False	NA	NA	False	NA	NA	NA	77376886	77376680	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_77376700_77376900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131039	chr5	+	7074	4	FSM	ENSMUSG00000029249.16	ENSMUST00000080359.12	7004	4	-65	-5	-65	5	multi-exon	FALSE	canonical	3	740	junction_1	62.4731053245226	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTTTATTATTGGTGT	3631	False	NA	19	True	AATAAA	-19	NA	77413272	77434284	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_77413636_77415778_77416671_77423080_77423165_77428549
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131046	chr5	+	7214	4	FSM	ENSMUSG00000029249.16	ENSMUST00000113449.2	6924	4	-290	0	-290	0	multi-exon	FALSE	canonical	3	119	junction_1	347.74543690592	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGACCTTTGTTTATTATT	4111	False	NA	14	True	AATAAA	-14	NA	77413752	77434279	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_77414261_77415778_77416671_77423080_77423165_77428549
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131073	chr5	+	247	1	Intergenic	novelGene_4046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGCATAATACAGAAATC	NA	False	NA	NA	False	NA	NA	NA	77448092	77448339	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_77448100_77448300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131084	chr5	-	236	1	Genic_Genomic	ENSMUSG00000036285.11	novel	NA	NA	NA	NA	763	62	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTGGGGGGGGAGTG	NA	False	NA	NA	False	NA	NA	NA	77451399	77451163	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr5_-_77451200_77451400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131089	chr5	+	4083	25	FSM	ENSMUSG00000029250.6	ENSMUST00000031167.6	4145	25	66	-4	66	4	multi-exon	TRUE	canonical	3	372	junction_9	39.992360381564	448	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTATCTTTGATTTCTC	NA	False	NA	20	True	AATAAA	-20	NA	77458059	77497175	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_77458478_77460997_77461071_77463696_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131102	chr5	-	186	1	Intergenic	novelGene_4047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAAGTGGGTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	77477952	77477766	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_77477800_77478000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131113	chr5	+	1186	1	FSM	ENSMUSG00000079067.6	ENSMUST00000120716.2	279	1	-97	-810	-97	810	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTCAATTTATTACATTAA	NA	False	NA	NA	False	AATAAA	-34	NA	84271074	84272260	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_84271100_84272300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131124	chr5	+	235	1	Intergenic	novelGene_4048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	209	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATTGGGTATAATAAACC	NA	False	NA	NA	False	AAAAAG	-37	NA	86034789	86035024	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_86034800_86035000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131131	chr5	+	193	1	Intergenic	novelGene_4049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAACCTGTTGCTGACTT	2724	False	NA	NA	False	NA	NA	NA	86074469	86074662	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_86074500_86074700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131142	chr5	-	3165	19	FSM	ENSMUSG00000029253.13	ENSMUST00000031170.10	3192	19	33	-6	1	6	multi-exon	FALSE	canonical	3	99	junction_10	17.8879399334224	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCTGTGGTGGTGTTC	NA	False	NA	0	True	ATTAAA	-23	NA	86213409	86159876	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_86160187_86161278_86161370_86164060_86164216_86166247_86166344_86168687_86168811_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86182370_86183274_86183449_86185170_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86206013_86206106_86209862_86209907_86213186
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131150	chr5	-	6566	33	FSM	ENSMUSG00000035898.14	ENSMUST00000039373.14	6590	33	25	-1	25	1	multi-exon	FALSE	canonical	3	104	junction_13	11.1589632554956	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTTGAGTTGCAACTA	7113	False	NA	-3	True	NA	NA	NA	86320637	86257144	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308233_86311937_86311967_86312555_86312651_86318413_86318477_86320526
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131158	chr5	+	213	1	Intergenic	novelGene_4050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTATAGATCCTATTTC	NA	False	NA	NA	False	NA	NA	NA	86286451	86286664	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_86286500_86286700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131168	chr5	+	1807	1	Antisense	novelGene_ENSMUSG00000035898.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTAAACCAGAACTTTTAG	NA	False	NA	NA	False	NA	NA	NA	86311691	86313498	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr5_+_86311700_86313500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131175	chr5	-	190	1	Intergenic	novelGene_4051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTTAAACTTATAAAGCC	NA	False	NA	NA	False	NA	NA	NA	86376781	86376591	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_86376600_86376800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131189	chr5	+	3282	17	FSM	ENSMUSG00000035851.15	ENSMUST00000120498.8	3269	17	-13	0	-1	0	multi-exon	FALSE	canonical	3	145	junction_1	43.5918122329182	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTATTTCCTTGTCT	NA	False	NA	13	True	AATAAA	-21	NA	86952078	86984518	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131191	chr5	+	3342	18	NIC	ENSMUSG00000035851.15	novel	3269	17	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_14	69.4558185225946	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTATTTCCTTGTCT	NA	False	NA	13	True	AATAAA	-21	NA	86952078	86984518	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_86952451_86957163_86957200_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979631_86979696_86979806_86979870_86981366_86981502_86983542
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131200	chr5	+	3307	18	NIC	ENSMUSG00000035851.15	novel	3269	17	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_1	58.4142230393181	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTATTTCCTTGTCT	NA	False	NA	13	True	AATAAA	-21	NA	86952089	86984518	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_86952451_86957163_86957200_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131225	chr5	+	187	1	Intergenic	novelGene_4052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTTGTTATTAAAGATA	1688	False	NA	NA	False	NA	NA	NA	88570160	88570347	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_88570200_88570300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131235	chr5	+	1704	1	FSM	ENSMUSG00000070697.5	ENSMUST00000090413.6	1629	1	-75	0	-75	0	mono-exon	FALSE	NA	NA	NA	NA	NA	345	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTTGTAATACCTATT	NA	False	NA	20	True	AATAAA	-22	NA	88702245	88703949	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_88702200_88703900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131243	chr5	+	3588	18	FSM	ENSMUSG00000029291.12	ENSMUST00000198965.5	3536	18	-52	0	-52	0	multi-exon	FALSE	canonical	3	79	junction_11	15.8934601684016	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATTGTGTTGGTTGTCTT	NA	False	NA	11	True	AATAAA	-15	NA	88712846	88799251	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_88713336_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793461_88795077_88795106_88796114_88796184_88797690
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131266	chr5	-	173	1	Intergenic	novelGene_4053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAGAATGAATAT	NA	False	NA	NA	False	NA	NA	NA	88834974	88834801	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_88834800_88835000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131269	chr5	+	6782	6	FSM	ENSMUSG00000006262.16	ENSMUST00000006424.8	2705	6	-8	-4069	8	-2162	multi-exon	FALSE	canonical	3	27	junction_3	7.75628777186613	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCCTTCGCATTAGTTT	NA	False	NA	10	True	AATAAA	-21	NA	88868721	88909917	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_88868981_88891162_88891330_88892915_88893010_88897383_88897518_88901018_88901183_88903953
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131290	chr5	-	5248	1	Intergenic	novelGene_4054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGGCTACATTC	NA	False	NA	NA	False	NA	NA	NA	89356998	89351750	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_89351800_89357000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131294	chr5	-	179	1	Intergenic	novelGene_4055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAATTAAACATC	NA	False	NA	NA	False	NA	NA	NA	89826094	89825915	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_89825900_89826100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131305	chr5	-	1278	6	NIC	ENSMUSG00000035505.15	novel	1307	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_5	93.5534072067928	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGGTGAGATAATTTC	NA	False	NA	-4	True	AATAAA	-16	NA	90371798	90362582	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_90363035_90365375_90365484_90366770_90366896_90367218_90367383_90370089_90370195_90371474
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131306	chr5	-	1339	6	FSM	ENSMUSG00000035505.15	ENSMUST00000118816.6	1307	6	-32	0	-3	0	multi-exon	FALSE	canonical	3	156	junction_3	54.1833922895199	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGGTGAGATAATTTC	NA	False	NA	-4	True	AATAAA	-16	NA	90371863	90362582	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_90363035_90365375_90365484_90366770_90366896_90367218_90367383_90370089_90370191_90371474
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131332	chr5	+	181	1	Intergenic	novelGene_4056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAATCTGGTGGACGT	3955	False	NA	NA	False	NA	NA	NA	90550243	90550424	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_90550200_90550400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131343	chr5	+	199	1	Intergenic	novelGene_4057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTCCAAGATTCCCATG	NA	False	NA	NA	False	NA	NA	NA	92060808	92061007	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_92060800_92061000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131359	chr5	+	189	1	Intergenic	novelGene_4058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACTAAGGTCTCTGGCAG	2881	False	NA	NA	False	NA	NA	NA	92140838	92141027	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_92140800_92141000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131365	chr5	+	183	1	Intergenic	novelGene_4059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAGAAGTTCACTGA	NA	False	NA	NA	False	NA	NA	NA	92163670	92163853	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_92163700_92163900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131367	chr5	-	224	1	Intergenic	novelGene_4060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGGTTTGTTTTTTTCTGT	NA	False	NA	NA	False	TTTAAA	-4	NA	92180308	92180084	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_92180100_92180300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131375	chr5	-	4221	11	FSM	ENSMUSG00000029405.17	ENSMUST00000113127.7	4182	11	-25	-14	-25	-4	multi-exon	FALSE	canonical	3	1117	junction_4	208.26764030929	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTAATTTAATCTGAAGT	NA	False	NA	-4	True	AATAAA	-29	NA	92231603	92200008	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131383	chr5	-	4314	12	FSM	ENSMUSG00000029405.17	ENSMUST00000202258.4	1884	12	-86	-2344	-25	8	multi-exon	FALSE	canonical	3	524	junction_5	444.293682188997	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTCCCTAATTTAATC	NA	False	NA	-10	True	AATAAA	-23	NA	92231603	92200014	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131386	chr5	-	4178	11	FSM	ENSMUSG00000029405.17	ENSMUST00000167918.8	4232	11	44	10	0	8	multi-exon	FALSE	canonical	3	261	junction_10	456.056180749697	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTCCCTAATTTAATC	NA	False	NA	-10	True	AATAAA	-23	NA	92231372	92200014	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131426	chr5	+	168	1	Intergenic	novelGene_4061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAGTTTATAGCC	NA	False	NA	NA	False	NA	NA	NA	92234728	92234896	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_92234700_92234900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131438	chr5	+	107	1	Intergenic	novelGene_4062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAATACAAGCTGGGTGTG	NA	False	NA	NA	False	NA	NA	NA	92259205	92259312	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_92259200_92259300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131448	chr5	-	170	1	Intergenic	novelGene_4063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTGG	2248	False	NA	NA	False	NA	NA	NA	92261416	92261246	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_92261200_92261400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131451	chr5	+	181	1	Intergenic	novelGene_4064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAATCTAAAGATA	NA	False	NA	NA	False	NA	NA	NA	92267334	92267515	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_92267300_92267500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131458	chr5	+	181	1	Intergenic	novelGene_4065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATGTGAGTTCCTA	NA	False	NA	NA	False	NA	NA	NA	92269174	92269355	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_92269200_92269400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131477	chr5	+	3899	24	NNC	ENSMUSG00000029407.11	novel	3898	24	NA	NA	0	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	100.480471444838	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTCATTGTTCCCTTT	NA	False	NA	15	True	AATAAA	-23	NA	92285804	92350659	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329358_92329756_92329969_92335093_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131484	chr5	-	262	1	Intergenic	novelGene_4066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAAGATCCAGCT	7481	False	NA	NA	False	NA	NA	NA	92355823	92355561	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_92355600_92355800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131487	chr5	+	193	1	Intergenic	novelGene_4067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAAACTCACTACCCCT	NA	False	NA	NA	False	NA	NA	NA	92364078	92364271	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_92364100_92364300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131496	chr5	-	2409	11	FSM	ENSMUSG00000029413.15	ENSMUST00000113102.10	2414	11	5	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	5.44885309033011	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGTCTGAGTGTCCTAC	9203	False	NA	-1	True	NA	NA	NA	92426024	92405517	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_92406803_92407412_92407491_92409210_92409240_92410367_92410435_92411268_92411332_92411449_92411623_92412939_92413017_92415900_92415992_92420302_92420430_92424777_92424943_92425770
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131505	chr5	-	5010	22	FSM	ENSMUSG00000029415.5	ENSMUST00000031364.5	5020	22	12	-2	12	2	multi-exon	FALSE	canonical	3	262	junction_13	31.6626205793221	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGAAATCTCTCCATAA	NA	False	NA	-4	True	AATAAA	-19	NA	92457871	92431866	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_92434730_92436325_92436488_92437598_92437684_92437779_92437971_92438116_92438212_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446121_92447920_92448023_92449670_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131514	chr5	-	2386	12	FSM	ENSMUSG00000034826.15	ENSMUST00000038514.15	2352	12	-34	0	-34	0	multi-exon	FALSE	canonical	3	487	junction_1	63.2088235288462	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTCTGGTGTTTTATTT	NA	False	NA	0	True	AATAAA	-25	NA	92583112	92563398	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958_92576186_92578659_92578813_92578897_92578982_92582862
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131532	chr5	-	4720	12	FSM	ENSMUSG00000029426.9	ENSMUST00000031377.9	4698	12	-22	0	-22	0	multi-exon	TRUE	canonical	3	99	junction_7	16.1496104397404	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCACTGTGAACTGTCTC	NA	False	NA	-11	True	ATTAAA	-16	NA	92653518	92589172	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_92592144_92594162_92594322_92596403_92596456_92597729_92597804_92599205_92599325_92601898_92602069_92602590_92602711_92607900_92607993_92608612_92608802_92609795_92609944_92633055_92633214_92653050
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131536	chr5	+	179	1	Intergenic	novelGene_4068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTTTGCCGGGCGTGGT	NA	False	NA	NA	False	NA	NA	NA	92726986	92727165	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_92727000_92727200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131541	chr5	-	184	1	Intergenic	novelGene_4069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAGTGTGAATATTAAAT	NA	False	NA	NA	False	NA	NA	NA	92905929	92905745	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_92905700_92905900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131555	chr5	-	204	1	Intergenic	novelGene_4070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCAAACAATCAGAATAAGT	NA	False	NA	NA	False	NA	NA	NA	93116833	93116629	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_93116600_93116800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131565	chr5	-	177	1	Intergenic	novelGene_4071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTTTAAAGAGTTCTA	8415	False	NA	NA	False	NA	NA	NA	93142301	93142124	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_93142100_93142300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131581	chr5	+	1806	10	FSM	ENSMUSG00000058013.12	ENSMUST00000202308.4	1792	10	-14	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	237.094813560491	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGCCCATCCCTGCCT	NA	False	NA	4	True	TTTAAA	-16	NA	93241295	93324296	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93323898
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131608	chr5	-	2850	8	NNC	ENSMUSG00000063015.13	novel	2804	7	NA	NA	-21	-4	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_7	182.803898498151	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGGTTTGTGTAGGAGTT	NA	False	NA	-6	True	AATAAA	-14	NA	93354308	93329795	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_-_93331280_93335446_93335678_93335938_93336080_93337005_93337081_93337422_93337552_93350163_93350322_93351125_93351222_93353772
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131612	chr5	+	187	1	Intergenic	novelGene_4072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTTCCTATTTTTACCA	NA	False	NA	NA	False	CATAAA	-27	NA	93346129	93346316	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_93346100_93346300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131617	chr5	+	195	1	Intergenic	novelGene_4073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATAAAGAGCAGGGTTG	NA	False	NA	NA	False	NA	NA	NA	93369204	93369399	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_93369200_93369400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131638	chr5	+	1276	1	FSM	ENSMUSG00000096617.4	ENSMUST00000180755.2	1002	1	-72	-202	-72	202	mono-exon	FALSE	NA	NA	NA	NA	NA	385	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACACCGTCAATAAGACAAA	NA	False	NA	NA	False	AATAAA	-38	NA	96009500	96010776	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_96009500_96010800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131643	chr5	+	3427	9	FSM	ENSMUSG00000029486.14	ENSMUST00000036437.13	3431	9	11	-7	11	7	multi-exon	FALSE	canonical	3	666	junction_1	44.6738178355063	266	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTATTCTATTATATGTG	NA	False	NA	NA	False	ATTAAA	-38	NA	96357984	96414575	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_96358053_96361645_96361770_96371629_96371892_96374143_96374228_96375538_96375611_96379539_96379652_96386697_96386805_96409920_96410003_96412059
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131671	chr5	-	3426	2	FSM	ENSMUSG00000046000.6	ENSMUST00000060265.6	3424	2	-1	-1	-1	1	multi-exon	FALSE	canonical	3	176	junction_1	0	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGTGAGTTAATAACATT	NA	False	NA	-2	True	AATAAA	-20	NA	97540239	97530055	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_97532729_97539486
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131682	chr5	+	200	1	Intergenic	novelGene_4074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGTGATTCCATAGGAC	NA	False	NA	NA	False	NA	NA	NA	97608792	97608992	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_97608800_97609000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131690	chr5	+	184	1	Intergenic	novelGene_4075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAATTGTTTGTCCCCAA	NA	False	NA	NA	False	NA	NA	NA	98345302	98345486	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_98345300_98345500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131696	chr5	-	183	1	Intergenic	novelGene_4076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTATACATAGAAATCTAAAG	NA	False	NA	NA	False	NA	NA	NA	99865532	99865349	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_99865300_99865500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131707	chr5	+	206	1	Intergenic	novelGene_4077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGAACTCAGATTCTT	NA	False	NA	NA	False	NA	NA	NA	100094944	100095150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_100094900_100095200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131718	chr5	-	2235	9	FSM	ENSMUSG00000000568.16	ENSMUST00000172361.8	6811	9	-85	4661	-85	2	multi-exon	FALSE	canonical	3	2301	junction_7	859.13983145935	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAATCTATTAATTTAAAT	NA	False	NA	-8	True	AATAAA	-17	NA	100126882	100108454	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131734	chr5	-	1565	7	FSM	ENSMUSG00000000568.16	ENSMUST00000072750.13	1537	7	-26	-2	-23	-2	multi-exon	FALSE	canonical	3	1409	junction_2	1330.01989333493	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGCTCTTTTATCATCA	NA	False	NA	NA	False	AATAAA	-19	NA	100126820	100108858	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131740	chr5	-	1628	8	FSM	ENSMUSG00000000568.16	ENSMUST00000019128.15	2000	8	-32	404	-31	0	multi-exon	FALSE	canonical	3	1409	junction_2	1208.23732295085	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	NA	False	NA	NA	False	AATAAA	-17	NA	100126828	100108860	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131762	chr5	-	2891	7	NIC	ENSMUSG00000000568.16	novel	1670	8	NA	NA	-23	0	intron_retention	FALSE	canonical	3	1800	junction_6	957.186270041289	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	NA	False	NA	NA	False	AATAAA	-17	NA	100126820	100108860	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131770	chr5	-	2914	8	NIC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	7	0	intron_retention	FALSE	canonical	3	2301	junction_6	866.95323885856	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	NA	False	NA	NA	False	AATAAA	-17	NA	100126786	100108860	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131773	chr5	-	2710	6	NIC	ENSMUSG00000000568.16	novel	1537	7	NA	NA	7	0	intron_retention	FALSE	canonical	3	1409	junction_1	1386.53083629611	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	NA	False	NA	NA	False	AATAAA	-17	NA	100126786	100108860	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131799	chr5	-	2446	8	FSM	ENSMUSG00000029328.16	ENSMUST00000128187.8	2752	8	308	-2	-19	2	multi-exon	FALSE	canonical	3	572	junction_1	185.830183616271	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTAAGTCTTGCTATGT	NA	False	NA	-12	True	AATAAA	-20	NA	100186773	100181433	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131803	chr5	-	3532	9	FSM	ENSMUSG00000029328.16	ENSMUST00000086900.11	2149	9	-233	-1150	-233	0	multi-exon	FALSE	canonical	3	230	junction_2	358.236915322807	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTTAAGTCTTGCTAT	NA	False	NA	-14	True	AATAAA	-18	NA	100187756	100181435	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_100182844_100183493_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131813	chr5	-	3195	8	NIC	ENSMUSG00000029328.16	novel	2752	8	NA	NA	-15	0	intron_retention	FALSE	canonical	3	230	junction_1	297.206243239284	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTTAAGTCTTGCTAT	NA	False	NA	-14	True	AATAAA	-18	NA	100186769	100181435	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131840	chr5	-	2561	7	NIC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	-15	0	intron_retention	FALSE	canonical	3	110	junction_6	363.263181300953	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186769	100182579	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131843	chr5	-	2416	7	FSM	ENSMUSG00000029328.16	ENSMUST00000153442.8	2374	7	-42	0	-16	0	multi-exon	FALSE	canonical	3	934	junction_3	92.4764234218046	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186770	100182579	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131851	chr5	-	2700	6	NIC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	-15	0	intron_retention	FALSE	canonical	3	934	junction_2	94.4681957062799	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186769	100182579	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131856	chr5	-	3442	5	NIC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	-19	0	intron_retention	FALSE	canonical	3	934	junction_2	102.524082536739	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186773	100182579	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131888	chr5	+	221	1	Intergenic	novelGene_4078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTACTGGTTTTCTTTTT	NA	False	NA	NA	False	AAAAAG	-27	NA	100224960	100225181	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_100225000_100225200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131912	chr5	-	4209	27	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	2	466	junction_5	100.698448422967	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8088	False	NA	-7	True	ATTAAA	-19	NA	100564113	100509507	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131917	chr5	-	4164	27	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	2	163	junction_5	145.633410441033	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8088	False	NA	-7	True	ATTAAA	-19	NA	100564113	100509507	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131924	chr5	-	4282	28	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	2	51	junction_7	217.697988658871	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8108	False	NA	-7	True	ATTAAA	-19	NA	100564093	100509507	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131950	chr5	+	152	1	Intergenic	novelGene_4079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCTCCATGATGGTCAGG	NA	False	NA	NA	False	NA	NA	NA	100537917	100538069	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_100537900_100538100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131955	chr5	-	928	5	FSM	ENSMUSG00000097772.8	ENSMUST00000181873.8	626	5	18	-320	-1	320	multi-exon	FALSE	canonical	3	343	junction_4	12.3389626792531	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTTTGGTAAAGATTTA	NA	False	NA	-1	True	ATTAAA	-17	NA	100577376	100568380	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_100568832_100569826_100569901_100574594_100574664_100576955_100577098_100577184
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131967	chr5	-	3822	13	NIC	ENSMUSG00000118665.1	novel	4451	13	NA	NA	-26	8	combination_of_known_junctions	FALSE	canonical	3	30	junction_11	48.956542520439	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGCATTTTTTCTTTAG	NA	False	NA	NA	False	AATAAA	-42	NA	100648519	100589891	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100633661_100633715_100648359
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131973	chr5	-	4475	13	FSM	ENSMUSG00000118665.1	ENSMUST00000239512.1	4451	13	-16	-8	-16	8	multi-exon	FALSE	canonical	3	163	junction_11	17.2980409937722	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGCATTTTTTCTTTAG	NA	False	NA	NA	False	AATAAA	-42	NA	100648509	100589891	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100632998_100633715_100648359
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000131994	chr5	+	1645	10	FSM	ENSMUSG00000035297.15	ENSMUST00000045993.15	1755	10	109	1	-25	-1	multi-exon	FALSE	canonical	3	1193	junction_9	105.134834062424	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTGTTCTATTCCTTT	5382	False	NA	42	True	AATAAA	-44	NA	100666283	100695668	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685335_100689402_100689519_100691704_100691790_100695169
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132014	chr5	+	188	1	Intergenic	novelGene_4080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTCACATACATTAAATAA	NA	False	NA	NA	False	NA	NA	NA	100702667	100702855	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_100702700_100702900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132020	chr5	+	244	1	Intergenic	novelGene_4081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGGAACCTGACATTTG	NA	False	NA	NA	False	NA	NA	NA	100733389	100733633	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_100733400_100733600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132029	chr5	-	1548	6	NIC	ENSMUSG00000029319.9	novel	1743	7	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_5	105.678758508983	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGCGACTCTTCATTACAG	NA	False	NA	-1	True	AATAAA	-20	NA	100822122	100802588	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809789_100811445_100811568_100821854
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132031	chr5	-	1733	7	FSM	ENSMUSG00000029319.9	ENSMUST00000031262.9	1743	7	10	0	10	0	multi-exon	FALSE	canonical	3	222	junction_5	48.3206880009887	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGCGACTCTTCATTACAG	NA	False	NA	-1	True	AATAAA	-20	NA	100822140	100802588	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809789_100811445_100811568_100815757_100815925_100821854
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132048	chr5	-	3685	18	FSM	ENSMUSG00000035266.17	ENSMUST00000044684.14	3689	18	-2	6	-2	0	multi-exon	FALSE	canonical	3	40	junction_16	11.2714232774287	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCGCTCTGGGTGATTA	NA	False	NA	-1	True	ATTAAA	-20	NA	100946466	100910016	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_100910503_100912806_100912942_100914553_100914668_100916147_100916322_100918263_100918363_100919599_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100938004_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944219_100944929_100946159
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132056	chr5	-	191	1	Intergenic	novelGene_4082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGCCGGGCGTGGTGGCA	NA	False	NA	NA	False	NA	NA	NA	100938634	100938443	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_100938400_100938600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132072	chr5	+	191	1	FSM	ENSMUSG00000104761.2	ENSMUST00000197084.2	2297	1	2095	11	2095	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGATTGTGGTGAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	100948709	100948900	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_100948700_100948900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132078	chr5	-	1693	10	FSM	ENSMUSG00000035234.19	ENSMUST00000200657.5	1668	10	-25	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	36.8299395118217	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTAATATCTTATTTTT	NA	False	NA	-3	True	AATAAA	-19	NA	100968831	100953057	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_100953318_100953763_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132087	chr5	-	2123	9	FSM	ENSMUSG00000035234.19	ENSMUST00000055245.13	2139	9	16	0	-2	0	multi-exon	FALSE	canonical	3	145	junction_2	23.2725025512943	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTAATATCTTATTTTT	NA	False	NA	-3	True	AATAAA	-19	NA	100968815	100953057	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132102	chr5	+	2881	13	FSM	ENSMUSG00000029314.15	ENSMUST00000031255.15	2884	13	3	0	3	0	multi-exon	FALSE	canonical	3	20	junction_3	3.86939558874797	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTGCATTATTCTTC	NA	False	NA	5	True	AATAAA	-16	NA	100994087	101046965	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_100994228_100994520_100994815_101005007_101005075_101031055_101031327_101032183_101032259_101032825_101032916_101033791_101033886_101037968_101038085_101039508_101039565_101040166_101040253_101040937_101041067_101041298_101041379_101045582
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132107	chr5	-	177	1	Intergenic	novelGene_4083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAATTTAAAGTAAAC	NA	False	NA	NA	False	NA	NA	NA	100997247	100997070	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_100997100_100997200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132134	chr5	-	186	1	Intergenic	novelGene_4084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCTTTCCAAAAATGTTA	NA	False	NA	NA	False	NA	NA	NA	102008223	102008037	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_102008000_102008200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132140	chr5	+	227	1	Intergenic	novelGene_4085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGAATAATATGTGGTC	NA	False	NA	NA	False	NA	NA	NA	103482563	103482790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_103482600_103482800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132142	chr5	-	217	1	Intergenic	novelGene_4086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTTTTTTGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	103517867	103517650	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_103517600_103517900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132152	chr5	+	3419	18	ISM	ENSMUSG00000034573.15	ENSMUST00000048957.11	7915	48	-286	56869	23	0	5prime_fragment	FALSE	canonical	3	18	junction_6	10.5656622127096	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATGCGTTTGTTTTCCT	NA	False	NA	NA	False	AGTAAA	-18	NA	103573080	103689300	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132156	chr5	+	214	1	Intergenic	novelGene_4087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGTTACTGCCTGGGAC	NA	False	NA	NA	False	NA	NA	NA	103654734	103654948	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_103654700_103654900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132163	chr5	+	168	1	Intergenic	novelGene_4088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAAGAGTTATG	NA	False	NA	NA	False	NA	NA	NA	103733923	103734091	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_103733900_103734100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132168	chr5	+	229	1	Intergenic	novelGene_4089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAACTGAGAATGTAGCTC	NA	False	NA	NA	False	NA	NA	NA	103836018	103836247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_103836000_103836200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132189	chr5	-	184	1	Intergenic	novelGene_4090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAACTGGATAAGTGGA	NA	False	NA	NA	False	NA	NA	NA	103858663	103858479	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_103858500_103858700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132191	chr5	+	208	1	Intergenic	novelGene_4091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGAGTACTGACTTCCG	NA	False	NA	NA	False	NA	NA	NA	103874758	103874966	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_103874800_103875000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132206	chr5	-	3187	10	FSM	ENSMUSG00000029312.13	ENSMUST00000031254.9	3193	10	-7	13	-7	-13	multi-exon	FALSE	canonical	3	103	junction_9	11.7473401244707	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTAGTCTTTTCATTGTT	NA	False	NA	NA	False	AATAAA	-33	NA	104059132	104009928	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104024156_104033772_104034157_104058981
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132216	chr5	-	3178	10	NNC	ENSMUSG00000029312.13	novel	3193	10	NA	NA	-7	11	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_9	28.2991078688506	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAACTACTAGTCTTTTC	NA	False	NA	NA	False	AATAAA	-27	NA	104059132	104009934	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104024156_104033772_104034154_104058981
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132222	chr5	+	187	1	Intergenic	novelGene_4092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATATGAGTATTATATATA	NA	False	NA	NA	False	NA	NA	NA	104158913	104159100	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_104158900_104159100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132230	chr5	+	237	1	Intergenic	novelGene_4093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTTATAAATTTCGAGAA	1603	False	NA	NA	False	GATAAA	-8	NA	104172290	104172527	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_104172300_104172500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132245	chr5	+	1478	8	FSM	ENSMUSG00000029310.14	ENSMUST00000031250.14	1488	8	0	10	0	-10	multi-exon	FALSE	canonical	3	305	junction_1	16.2468207250979	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTGACTTGTGTTTC	NA	False	NA	10	True	AATAAA	-13	NA	104194734	104213235	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_104195013_104198443_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132253	chr5	-	194	1	Antisense	novelGene_ENSMUSG00000097877.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATTTCAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	104267185	104266991	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr5_-_104267000_104267200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132272	chr5	+	1510	7	NIC	ENSMUSG00000029304.15	novel	1410	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	2261.9683169016	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCTGGTGGTGTCAATT	NA	False	NA	31	True	AATAAA	-18	NA	104582986	104588916	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_104583063_104584137_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132279	chr5	+	1463	7	FSM	ENSMUSG00000029304.15	ENSMUST00000112748.8	1456	7	0	-7	0	4	multi-exon	FALSE	canonical	3	593	junction_1	2050.93187491822	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTGGTGTCAATTATTC	NA	False	NA	35	True	AATAAA	-22	NA	104582986	104588920	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_104583115_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132294	chr5	+	5116	15	FSM	ENSMUSG00000034462.10	ENSMUST00000086831.4	5219	15	103	0	-17	0	multi-exon	FALSE	canonical	3	58	junction_14	9.78049913170622	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGGTGTTAAAAACACGT	NA	False	NA	9	True	AATAAA	-15	NA	104607418	104653685	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_104608092_104614748_104614863_104624908_104625043_104626656_104626908_104628015_104628241_104630890_104631120_104634512_104634681_104637098_104637281_104638509_104638631_104642758_104642858_104646306_104646429_104646623_104646742_104647035_104647200_104650157_104650306_104651317
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132300	chr5	+	194	1	Intergenic	novelGene_4094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGCTACCTAGGCCGGG	NA	False	NA	NA	False	NA	NA	NA	104688125	104688319	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_104688100_104688300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132310	chr5	+	2759	4	Intergenic	novelGene_4095	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	93	junction_1	10.4243305140746	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTGTGTTGAATTAC	NA	False	NA	NA	False	AATAAA	-17	NA	104719535	104732486	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_104719638_104728353_104728481_104728722_104728784_104730017
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132319	chr5	+	203	1	Intergenic	novelGene_4096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	654	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTAAAGAATCTCTGAATT	NA	False	NA	NA	False	NA	NA	NA	104725131	104725334	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_104725100_104725300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132332	chr5	+	2079	1	Intergenic	novelGene_4097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTGTGTTGAATTAC	NA	False	NA	NA	False	AATAAA	-17	NA	104730407	104732486	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_104730400_104732500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132342	chr5	-	182	1	Intergenic	novelGene_4098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATTAACTCAAACAAAT	NA	False	NA	NA	False	NA	NA	NA	104773708	104773526	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_104773500_104773700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132350	chr5	-	205	1	Intergenic	novelGene_4099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAACTAAATGTAAAT	NA	False	NA	NA	False	NA	NA	NA	104809002	104808797	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_104808800_104809000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132362	chr5	-	182	1	Intergenic	novelGene_4100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATTAACTCAAACAAAT	NA	False	NA	NA	False	NA	NA	NA	104826634	104826452	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_104826500_104826600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132380	chr5	+	180	1	Intergenic	novelGene_4101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGGCCGGGCATCGTGG	NA	False	NA	NA	False	NA	NA	NA	104986612	104986792	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_104986600_104986800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132385	chr5	+	191	1	Intergenic	novelGene_4102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTGGAATAAGCCAAGTA	NA	False	NA	NA	False	NA	NA	NA	105295227	105295418	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_105295200_105295400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132399	chr5	+	204	1	Intergenic	novelGene_4103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGGCCGGAACGAGTG	NA	False	NA	NA	False	NA	NA	NA	105833230	105833434	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_105833200_105833400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132401	chr5	-	229	1	Intergenic	novelGene_4104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCATGACATCCTCTACCC	NA	False	NA	NA	False	CATAAA	-7	NA	105843222	105842993	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_105843000_105843200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132406	chr5	+	3950	3	FSM	ENSMUSG00000046079.17	ENSMUST00000060531.16	3923	3	-32	5	-32	0	multi-exon	FALSE	canonical	3	145	junction_1	205.5	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGTGGTTCACAACCTT	4039	False	NA	19	True	AATAAA	-30	NA	105847802	105963076	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_105848121_105880095_105880241_105959589
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132447	chr5	+	208	1	Intergenic	novelGene_4105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATCCGCCTGCCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	105900238	105900446	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_105900200_105900400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132454	chr5	+	219	1	Intergenic	novelGene_4106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTGAGATGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	105927906	105928125	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_105927900_105928100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132465	chr5	+	209	1	Intergenic	novelGene_4107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTGAGATGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	106012710	106012919	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_106012700_106012900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132475	chr5	+	180	1	Intergenic	novelGene_4108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGGAGGAACCC	NA	False	NA	NA	False	NA	NA	NA	106657442	106657622	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_106657400_106657600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132490	chr5	+	2964	12	FSM	ENSMUSG00000029283.18	ENSMUST00000031221.12	2961	12	5	-8	5	8	multi-exon	FALSE	canonical	3	169	junction_8	37.8828119074671	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTTATTTAAAGAGTAATA	NA	False	NA	18	True	AATAAA	-23	NA	107112192	107132306	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107127160_107127311_107130829
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132528	chr5	+	191	1	Intergenic	novelGene_4109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAATTGTCCAATTATGT	NA	False	NA	NA	False	NA	NA	NA	107166134	107166325	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_107166100_107166300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132538	chr5	+	177	1	Intergenic	novelGene_4110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTAAAAAAAAAGGACA	NA	False	NA	3	True	NA	NA	NA	107285946	107286123	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_107285900_107286100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132550	chr5	-	173	1	Intergenic	novelGene_4111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGATGCAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	107501415	107501242	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_107501200_107501400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132566	chr5	+	2285	13	FSM	ENSMUSG00000033773.15	ENSMUST00000065422.12	2268	13	-14	-3	0	3	multi-exon	TRUE	canonical	3	138	junction_1	12.1951720866178	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCAGAAGCTGACATTG	NA	False	NA	29	True	AATAAA	-22	NA	107745586	107809707	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_107745727_107746387_107746434_107749596_107749712_107751391_107751491_107751686_107751753_107754770_107754860_107766006_107766043_107767687_107768622_107771567_107771663_107773753_107773835_107780928_107780998_107803022_107803177_107809346
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132577	chr5	-	6258	20	NIC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	30	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_9	42.475216824889	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTCCTTAGATTATT	NA	False	NA	-1	True	ATTAAA	-19	NA	108017004	107892660	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107957455_107957603_107958155_107958189_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132579	chr5	-	5990	18	NIC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	118	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_7	27.3729844338649	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTCCTTAGATTATT	NA	False	NA	-1	True	ATTAAA	-19	NA	108016916	107892660	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132591	chr5	+	188	1	Intergenic	novelGene_4112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTGTGAAGAAGAGCACA	8652	False	NA	NA	False	NA	NA	NA	108009864	108010052	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_108009900_108010100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132596	chr5	+	195	1	Intergenic	novelGene_4113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTAAGAGAGGCTTGTGGC	NA	False	NA	NA	False	NA	NA	NA	108030084	108030279	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_108030100_108030300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132603	chr5	+	196	1	Intergenic	novelGene_4114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAAAAGGATTCTT	NA	False	NA	NA	False	NA	NA	NA	108041898	108042094	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_108041900_108042100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132613	chr5	+	2040	8	FSM	ENSMUSG00000058558.13	ENSMUST00000082223.13	2045	8	5	0	5	0	multi-exon	FALSE	canonical	3	7026	junction_3	385.215126750691	672	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTGGCATTCTTAATT	NA	False	NA	24	True	AATAAA	-18	NA	108048372	108056871	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055054_108055144_108055762
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132632	chr5	+	172	1	Intergenic	novelGene_4115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGCTCACATAG	8156	False	NA	NA	False	NA	NA	NA	108096101	108096273	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_108096100_108096300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132657	chr5	-	191	1	Intergenic	novelGene_4116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	275	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAAGAGTTGAAGGTCAT	NA	False	NA	NA	False	NA	NA	NA	108207580	108207389	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_108207400_108207600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132672	chr5	+	4183	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4939	218	intron_retention	FALSE	canonical	0	0	junction_3	488.414344003707	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTGTTTATGTCCTTTC	NA	False	NA	11	True	AAAAAG	-24	NA	108208600	108257088	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132698	chr5	+	4111	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4935	2	intron_retention	FALSE	canonical	0	0	junction_4	626.478354685051	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108208604	108256872	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132703	chr5	+	4071	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4934	2	intron_retention	FALSE	canonical	0	0	junction_4	691.207703146376	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108208605	108256872	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_+_108208730_108226731_108226841_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132705	chr5	+	3838	14	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4934	2	intron_retention	FALSE	canonical	0	0	junction_3	632.644950296843	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108208605	108256872	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132709	chr5	+	3882	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4934	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	574.951383451969	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108208605	108256872	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_+_108208730_108228690_108228708_108228787_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132710	chr5	+	3966	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4934	2	intron_retention	FALSE	canonical	3	616	junction_3	357.553592386612	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108208605	108256872	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_+_108208730_108228690_108228890_108229002_108229089_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132728	chr5	+	4163	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	2	intron_retention	FALSE	canonical	0	0	junction_4	669.392660053375	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108208606	108256872	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_+_108208730_108217027_108217230_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132729	chr5	+	2664	4	NNC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	-4933	2	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_2	715.6819591597	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108208606	108256872	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_+_108208730_108228690_108228708_108252291_108252397_108254453
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132731	chr5	+	4029	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	671.498880188009	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108208606	108256872	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_+_108208730_108221172_108221321_108228690_108228708_108228787_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132751	chr5	+	4133	15	FSM	ENSMUSG00000029267.18	ENSMUST00000081567.11	4060	15	-71	-2	-3	2	multi-exon	FALSE	canonical	0	0	junction_3	595.009556603068	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108213536	108256872	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_108213832_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132773	chr5	+	4236	16	NIC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	0	2	intron_retention	FALSE	canonical	0	0	junction_4	643.731503725652	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108213581	108256872	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_108213832_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132776	chr5	+	4290	16	NIC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	0	2	intron_retention	FALSE	canonical	0	0	junction_4	677.372492306363	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108213581	108256872	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_108213832_108217027_108217230_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132802	chr5	+	189	1	Intergenic	novelGene_4117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAGGAATGACTTTAAAAA	6930	False	NA	NA	False	NA	NA	NA	108276600	108276789	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_108276600_108276800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132820	chr5	-	198	1	Intergenic	novelGene_4118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTCCCAGAGTGGGGT	NA	False	NA	NA	False	NA	NA	NA	108310376	108310178	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_108310200_108310400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132825	chr5	-	233	1	Intergenic	novelGene_4119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAGAAACTTTAAGATA	NA	False	NA	NA	False	AAAAAG	-32	NA	108373749	108373516	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_108373500_108373700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132833	chr5	+	220	1	Intergenic	novelGene_4120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTCTTTTAACAAATTA	NA	False	NA	NA	False	NA	NA	NA	108388158	108388378	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_108388200_108388400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132842	chr5	+	3078	3	FSM	ENSMUSG00000029265.5	ENSMUST00000031190.5	3085	3	7	0	7	0	multi-exon	FALSE	canonical	3	201	junction_1	9	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTTATATTTAATGAT	NA	False	NA	NA	False	AATAAA	-21	NA	108416769	108428392	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_108417676_108423434_108423599_108426384
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132846	chr5	+	4387	13	FSM	ENSMUSG00000029263.16	ENSMUST00000119014.8	4573	13	190	-4	163	4	multi-exon	TRUE	canonical	3	51	junction_6	9.64761052742537	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTCTGTTTTCTTTTG	NA	False	NA	NA	False	AATAAA	-29	NA	108460664	108497225	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_108460945_108461824_108462031_108465128_108465339_108466690_108466880_108467761_108467904_108474682_108474896_108479840_108480059_108480549_108480832_108483969_108484428_108486420_108486613_108489660_108489971_108492089_108492254_108495702
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132858	chr5	+	187	1	Intergenic	novelGene_4121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAATTAAAAAAAAATGTCC	NA	False	NA	NA	False	NA	NA	NA	108479580	108479767	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_108479600_108479800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132865	chr5	-	344	4	FSM	ENSMUSG00000050856.17	ENSMUST00000049628.16	371	4	28	-1	-23	1	multi-exon	FALSE	canonical	3	3979	junction_1	506.673026275877	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTCTCTTTACTGTTTG	5530	False	NA	1	True	AATAAA	-25	NA	108582286	108581108	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_108581204_108581596_108581696_108581891_108581947_108582191
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132876	chr5	+	5091	11	FSM	ENSMUSG00000033623.14	ENSMUST00000046975.12	7708	11	-3	2620	-3	-2620	multi-exon	FALSE	canonical	3	114	junction_9	9.83666610188635	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCAGTCTGGCAATGTT	NA	False	NA	NA	False	AATAAA	-25	NA	108609094	108652222	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_108609318_108619937_108619978_108620242_108620384_108621654_108621773_108622975_108623073_108626168_108626225_108634005_108634114_108635701_108635791_108643699_108643838_108647492_108647574_108648222
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132887	chr5	+	254	1	Intergenic	novelGene_4122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAAGAGAGGGGGCTGGA	4247	False	NA	NA	False	NA	NA	NA	108634286	108634540	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_108634300_108634500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132897	chr5	-	4479	28	FSM	ENSMUSG00000062234.15	ENSMUST00000046603.15	4453	28	-23	-3	-7	0	multi-exon	FALSE	canonical	3	318	junction_10	27.4864725426801	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGCTTGTAAAGCACTTC	NA	False	NA	-25	True	ATTAAA	-26	NA	108777628	108717276	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132951	chr5	+	3195	14	FSM	ENSMUSG00000033540.19	ENSMUST00000112563.9	3373	14	179	-1	-10	1	multi-exon	FALSE	canonical	2	36	junction_11	7.1294040681437	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCTCCCAAGTCTTCC	NA	False	NA	18	True	NA	NA	NA	108817150	108832424	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_108817384_108817984_108818126_108827364_108827451_108827569_108827678_108827976_108828073_108828160_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537_108829660_108829767_108829894_108829965_108830043_108830918_108831020_108831132
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132978	chr5	+	187	1	Antisense	novelGene_ENSMUSG00000067010.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGAGCATTCATTCATAC	NA	False	NA	NA	False	NA	NA	NA	109140492	109140679	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr5_+_109140500_109140700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000132998	chr5	-	2597	4	FSM	ENSMUSG00000072762.10	ENSMUST00000112547.8	2001	4	-121	-475	-121	475	multi-exon	FALSE	canonical	3	85	junction_1	29.0631496343164	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGCCATATGCCTTTTT	7825	False	NA	NA	False	NA	NA	NA	109899584	109883380	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_109885666_109886815_109886877_109887064_109887192_109899460
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133015	chr5	-	2025	4	NNC	ENSMUSG00000105471.2	novel	665	2	NA	NA	-6	-12826	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	67.6214955961983	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTTGGTCTTGGTATT	NA	False	NA	-3	True	NA	NA	NA	109944170	109930098	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_-_109931814_109932961_109933023_109933207_109933335_109944048
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133020	chr5	-	3909	4	Genic_Genomic	ENSMUSG00000105044.2	novel	645	1	NA	NA	-10909	1499	multi-exon	FALSE	canonical	3	110	junction_1	60.4997704311531	47	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGCTCAACAATTAATTT	NA	False	NA	1	True	NA	NA	NA	109992920	109979867	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr5_-_109983468_109984614_109984676_109984863_109984991_109992799
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133034	chr5	-	153	1	Intergenic	novelGene_4123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTAAAAAAAAAAGAGTCAC	NA	False	NA	NA	False	NA	NA	NA	109997430	109997277	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_109997300_109997400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133042	chr5	+	3763	4	FSM	ENSMUSG00000066613.15	ENSMUST00000112540.8	2081	4	-13	-1669	-13	1669	multi-exon	FALSE	canonical	3	131	junction_3	47.4856703531591	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCTCAGCAATTAATTT	8357	False	NA	NA	False	ATTAAA	-24	NA	110144373	110159946	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_110144500_110154809_110154937_110155121_110155183_110156497
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133057	chr5	+	189	1	Intergenic	novelGene_4124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGTCTTAGCAGACATG	NA	False	NA	NA	False	NA	NA	NA	110193489	110193678	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_110193500_110193700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133080	chr5	+	2952	5	FSM	ENSMUSG00000023284.16	ENSMUST00000112528.8	3158	5	187	19	-57	-19	multi-exon	TRUE	canonical	3	28	junction_1	12.7744862910412	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCTATTTTAACCAGCA	2136	False	NA	NA	False	NA	NA	NA	110258144	110277641	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_110258184_110259762_110259933_110271625_110271747_110272218_110272312_110275112
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133147	chr5	+	5258	13	FSM	ENSMUSG00000029501.15	ENSMUST00000197188.5	4077	13	0	-1181	0	-1	multi-exon	FALSE	canonical	3	178	junction_3	31.2021856428182	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTCTGGGAGATGTCT	NA	False	NA	18	True	ATTAAA	-20	NA	110378869	110404516	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_110379290_110382212_110382687_110384138_110384346_110385520_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110401209_110401648_110401781_110402166
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133173	chr5	-	2042	6	FSM	ENSMUSG00000029500.17	ENSMUST00000059229.16	2044	6	6	-4	6	4	multi-exon	FALSE	canonical	3	390	junction_2	111.169420255752	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTGTTTTAAAGGGAAAA	NA	False	NA	-16	True	AATAAA	-22	NA	110417747	110407016	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_110408304_110413377_110413509_110413605_110413695_110413776_110413903_110414952_110415132_110417517
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133180	chr5	-	1081	5	FSM	ENSMUSG00000029499.12	ENSMUST00000031472.12	1041	5	-49	9	-49	4	multi-exon	FALSE	canonical	3	476	junction_4	29.6004645233821	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAATGGGTGTGGTTTCTC	NA	False	NA	-5	True	AATAAA	-19	NA	110434101	110422156	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_110422495_110425520_110425641_110429062_110429226_110431511_110431620_110433749
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133194	chr5	-	165	1	Intergenic	novelGene_4125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTAAAGCTT	NA	False	NA	NA	False	NA	NA	NA	110429983	110429818	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_110429800_110430000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133205	chr5	+	729	6	FSM	ENSMUSG00000007080.15	ENSMUST00000112482.2	747	6	18	0	-18	0	multi-exon	FALSE	canonical	3	245	junction_5	26.0967430918113	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGTGTTCTGTTTTGTGC	NA	False	NA	9	True	AATAAA	-15	NA	110434224	110439101	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133232	chr5	-	3182	3	FSM	ENSMUSG00000043323.18	ENSMUST00000200293.2	976	3	-86	-2120	13	0	multi-exon	FALSE	canonical	3	401	junction_2	98.5	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTCTTATTATTTAAG	NA	False	NA	-1	True	AATAAA	-28	NA	110596455	110577740	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_110580012_110580766_110580968_110595745
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133267	chr5	-	2527	3	NNC	ENSMUSG00000043323.18	novel	976	3	NA	NA	-4249	-3	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_2	277.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTAGTGTCTTATTATTT	NA	False	NA	-4	True	AATAAA	-25	NA	110585436	110577743	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_-_110580012_110580766_110580968_110585378
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133274	chr5	-	4737	1	Intergenic	novelGene_4126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	110617080	110612343	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_110612300_110617100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133293	chr5	+	2548	15	FSM	ENSMUSG00000029504.6	ENSMUST00000031478.6	4846	15	0	2298	0	327	multi-exon	TRUE	canonical	3	94	junction_7	18.2382195693885	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAATTCCCGATAGCTCC	NA	False	NA	7	True	AATAAA	-18	NA	110801316	110806064	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110803280_110803430_110803540_110803625_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133308	chr5	+	177	1	Intergenic	novelGene_4127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAAGTAATTTGTTTT	3913	False	NA	NA	False	NA	NA	NA	110883846	110884023	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_110883800_110884000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133321	chr5	+	216	1	Intergenic	novelGene_4128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATACCCATTTTGAGGAC	NA	False	NA	NA	False	NA	NA	NA	110920515	110920731	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_110920500_110920700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133327	chr5	-	1510	6	FSM	ENSMUSG00000029507.17	ENSMUST00000170468.8	1510	6	1	-1	1	0	multi-exon	FALSE	canonical	3	83	junction_5	177.715052823333	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGCCTATTTTCCTTT	NA	False	NA	1	True	ATTAAA	-22	NA	110928480	110921532	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928427
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133333	chr5	-	1802	6	FSM	ENSMUSG00000029507.17	ENSMUST00000031483.15	1814	6	12	0	7	0	multi-exon	FALSE	canonical	3	282	junction_5	100.055184773204	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGCCTATTTTCCTTT	NA	False	NA	1	True	ATTAAA	-22	NA	110928450	110921532	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928105
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133343	chr5	-	1655	5	NIC	ENSMUSG00000029507.17	novel	1814	6	NA	NA	13	-2	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	214.321020900891	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTTTGCCTATTTTCC	NA	False	NA	-2	True	ATTAAA	-19	NA	110928444	110921535	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_110921846_110922387_110923080_110923401_110923505_110927552_110927764_110928105
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133355	chr5	-	5279	28	FSM	ENSMUSG00000029512.12	ENSMUST00000031490.11	5213	28	-65	-1	-65	1	multi-exon	FALSE	canonical	3	530	junction_12	186.450389110485	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGTCAATTTCATCCT	NA	False	NA	-1	True	AATAAA	-16	NA	110958028	110932352	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133358	chr5	-	5264	28	FSM	ENSMUSG00000029512.12	ENSMUST00000200299.2	3581	28	-76	-1607	-32	1	multi-exon	TRUE	canonical	3	128	junction_11	217.248929557064	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGTCAATTTCATCCT	NA	False	NA	-1	True	AATAAA	-16	NA	110957995	110932352	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938821_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133381	chr5	+	212	1	Intergenic	novelGene_4129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATCAGGCTGGCTATGA	NA	False	NA	NA	False	NA	NA	NA	110973695	110973907	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_110973700_110973900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133396	chr5	-	568	3	ISM	ENSMUSG00000043510.13	ENSMUST00000056937.12	804	6	29	6782	29	-6771	5prime_fragment	FALSE	canonical	3	372	junction_2	33.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTCTTTGTAAATCC	NA	False	NA	NA	False	TTTAAA	-18	NA	110987614	110983717	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr5_-_110983936_110984172_110984270_110987361
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133412	chr5	+	2399	16	NIC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	2	-5	combination_of_known_junctions	TRUE	canonical	3	57	junction_1	67.6591457232502	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGTAGTTTGTTGTGGC	9201	False	NA	26	True	AAAACA	-2	NA	110987867	111022006	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_110987915_110988276_110988407_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873_111015960_111019892_111019974_111021345
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133426	chr5	-	184	1	Intergenic	novelGene_4130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGGTAGAGGAAAAGAAGCA	NA	False	NA	NA	False	NA	NA	NA	111258443	111258259	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_111258300_111258400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133432	chr5	+	2798	11	NIC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	-43	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	375.1786774325	899	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGCTCCTGTGGTTG	NA	False	NA	18	True	AATAAA	-19	NA	111478585	111536227	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494441_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133448	chr5	+	2685	10	NIC	ENSMUSG00000050017.12	novel	2632	11	NA	NA	-15	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	433.102702158834	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGCTCCTGTGGTTG	NA	False	NA	18	True	AATAAA	-19	NA	111478613	111536227	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494441_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111534368
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133468	chr5	+	193	1	Intergenic	novelGene_4131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGGCTGAGCAAGCCATG	NA	False	NA	NA	False	NA	NA	NA	112303206	112303399	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_112303200_112303400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133478	chr5	+	1894	7	NIC	ENSMUSG00000029344.16	novel	1835	7	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	128.99956933606	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGTGAGTAGCTTTCTT	NA	False	NA	22	True	AATAAA	-32	NA	112424569	112463222	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_112424638_112451765_112451838_112455431_112456421_112457554_112457754_112459549_112459601_112461107_112461157_112462756
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133479	chr5	+	1819	7	FSM	ENSMUSG00000029344.16	ENSMUST00000239473.2	1813	7	-3	-3	0	3	multi-exon	FALSE	canonical	3	176	junction_1	59.7847992571876	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTGAGTAGCTTTCTTCT	NA	False	NA	24	True	AATAAA	-34	NA	112424569	112463224	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_112424638_112451765_112451838_112455431_112456344_112457554_112457754_112459549_112459601_112461107_112461157_112462756
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133492	chr5	+	1844	7	NIC	ENSMUSG00000029344.16	novel	442	5	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_1	87.1615677284942	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTAGCTTTCTTCTCTT	NA	False	NA	27	True	AATAAA	-37	NA	112436588	112463227	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_112436679_112451765_112451838_112455431_112456344_112457554_112457754_112459549_112459601_112461107_112461157_112462756
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133498	chr5	+	3568	14	FSM	ENSMUSG00000029345.14	ENSMUST00000031288.14	3560	14	0	-8	0	8	multi-exon	FALSE	canonical	3	92	junction_4	15.3503464486856	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATGGGTGTTTGCTTTCT	NA	False	NA	22	True	AATAAA	-24	NA	112474223	112485947	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_112474340_112475350_112475537_112475827_112476049_112477231_112477386_112477612_112477770_112478956_112479085_112479733_112479887_112480829_112481358_112481440_112481548_112482182_112482352_112482725_112482970_112483438_112483582_112483880_112484047_112484851
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133525	chr5	+	3302	14	FSM	ENSMUSG00000042328.14	ENSMUST00000112359.9	3345	14	42	1	25	-1	multi-exon	TRUE	canonical	3	34	junction_1	19.6098031274724	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAGTGATCAGCTAGC	NA	False	NA	8	True	AATAAA	-14	NA	112490990	112526279	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_112491030_112491909_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133527	chr5	+	2806	14	FSM	ENSMUSG00000042328.14	ENSMUST00000035279.4	2836	14	30	0	25	0	multi-exon	FALSE	canonical	3	24	junction_1	21.6682900317355	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAGTGATCAGCTAGCA	NA	False	NA	9	True	AATAAA	-15	NA	112490990	112526280	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_112491030_112492406_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133535	chr5	-	186	1	Intergenic	novelGene_4132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATGAATGGGGTGG	NA	False	NA	NA	False	NA	NA	NA	112807107	112806921	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_112806900_112807100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133546	chr5	-	6555	21	FSM	ENSMUSG00000042249.12	ENSMUST00000065167.9	6533	21	-24	2	-24	-2	multi-exon	FALSE	canonical	3	54	junction_7	10.5322124931089	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGCTTGAGGCTGACA	515	False	NA	-6	True	AATAAA	-16	NA	113163404	113058349	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117136_113121372_113121447_113133630_113133708_113163232
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133559	chr5	-	4335	16	FSM	ENSMUSG00000042216.14	ENSMUST00000057209.12	4339	16	13	-9	-1	0	multi-exon	FALSE	canonical	3	35	junction_5	17.3674024156368	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGGGTCTGGTTATTTGT	NA	False	NA	0	True	AATATA	-19	NA	113428454	113391085	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_113392960_113398738_113398907_113400863_113400961_113403117_113403228_113406656_113406740_113407914_113408040_113411114_113411703_113413744_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133578	chr5	+	3245	8	ISM	ENSMUSG00000063430.10	ENSMUST00000094452.4	4302	9	50729	5	996	2	3prime_fragment	FALSE	canonical	3	32	junction_6	7.59430506285829	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGCCCAGTTGTGTAT	NA	False	NA	9	True	ATTAAA	-19	NA	113689041	113727781	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr5_+_113689396_113696409_113696525_113698961_113699147_113708697_113708820_113710299_113710475_113712079_113712245_113715323_113715525_113725853
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133588	chr5	+	155	1	Intergenic	novelGene_4133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAGAAGGCTCAT	1883	False	NA	NA	False	NA	NA	NA	113737899	113738054	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_113737900_113738100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133593	chr5	+	187	1	Intergenic	novelGene_4134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTAAAGAAAAAAAGAGCT	7817	False	NA	NA	False	NA	NA	NA	113836725	113836912	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_113836700_113836900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133625	chr5	+	333	1	FSM	ENSMUSG00000105031.2	ENSMUST00000199823.2	204	1	-27	-102	-27	102	mono-exon	FALSE	NA	NA	NA	NA	NA	1141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCTGGGCTTGGGCTCCC	NA	False	NA	33	True	AATAAA	-28	NA	113905156	113905489	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_113905200_113905500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133636	chr5	+	908	5	FSM	ENSMUSG00000025825.13	ENSMUST00000026937.12	957	5	36	13	-19	2	multi-exon	FALSE	canonical	3	687	junction_1	28.9179874818425	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTACTGAACCTGATT	3631	False	NA	NA	False	AATAAA	-17	NA	113910844	113916336	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_113911006_113912323_113912438_113913278_113913390_113914831_113914911_113915893
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133649	chr5	+	192	1	Intergenic	novelGene_4135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGGCTGGACCAGCCTCA	3787	False	NA	NA	False	NA	NA	NA	113949312	113949504	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_113949300_113949500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133660	chr5	+	195	1	Intergenic	novelGene_4136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAAATCCACCTGCCTC	NA	False	NA	NA	False	NA	NA	NA	113973552	113973747	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_113973600_113973700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133689	chr5	+	116	1	Intergenic	novelGene_4137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGATTTATTTATTTA	9123	False	NA	NA	False	AATAAA	-16	NA	114074589	114074705	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_114074600_114074700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133699	chr5	-	5761	14	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	-6211	28	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_13	82.9598177489967	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGTTTAATGACATCG	NA	False	NA	NA	False	NA	NA	NA	114111028	114077797	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114110788
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133704	chr5	-	5694	15	FSM	ENSMUSG00000042121.17	ENSMUST00000159592.8	8436	15	99	2643	-16	28	multi-exon	FALSE	canonical	3	321	junction_13	43.65589003438	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGTTTAATGACATCG	NA	False	NA	NA	False	NA	NA	NA	114131856	114077797	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133717	chr5	-	3367	11	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	4938	514	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	119.866634223207	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCGTTCTGAGAACAATGC	NA	False	NA	-12	True	TATAAA	-16	NA	114099879	114079738	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114099801
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133726	chr5	+	181	1	Antisense	novelGene_ENSMUSG00000042078.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAGAACTAACAT	NA	False	NA	NA	False	NA	NA	NA	114203144	114203325	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr5_+_114203100_114203300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133730	chr5	+	190	1	Intergenic	novelGene_4138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTTTATATAGAGTTG	NA	False	NA	NA	False	NA	NA	NA	114233441	114233631	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_114233400_114233600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133740	chr5	-	1068	4	NNC	ENSMUSG00000044339.13	novel	1073	4	NA	NA	-2533	0	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_3	211.98480029369	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGGGGTGTGTGCA	5445	False	NA	-2	True	AATAAA	-22	NA	114268812	114261986	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_-_114262316_114263592_114263792_114265586_114265831_114268516
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133741	chr5	-	913	4	FSM	ENSMUSG00000044339.13	ENSMUST00000112279.2	899	4	-5	-9	-5	0	multi-exon	FALSE	canonical	3	267	junction_3	133.312498372141	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGGGGTGTGTGCA	7973	False	NA	-2	True	AATAAA	-22	NA	114266284	114261986	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_114262316_114263592_114263792_114265586_114265831_114266143
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133759	chr5	+	2008	7	FSM	ENSMUSG00000029591.15	ENSMUST00000031587.13	1985	7	-23	0	-23	0	multi-exon	FALSE	canonical	3	427	junction_1	117.255656106172	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGCCGACTATTCTTCA	NA	False	NA	23	True	AATAAA	-19	NA	114268423	114277384	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_114268687_114269379_114269575_114270241_114270338_114273924_114274023_114274407_114274497_114275213_114275393_114276296
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133781	chr5	-	208	1	Intergenic	novelGene_4139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGAAACAAACGCCCAGG	NA	False	NA	NA	False	NA	NA	NA	114297617	114297409	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_114297400_114297600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133787	chr5	+	1617	4	ISM	ENSMUSG00000042010.17	ENSMUST00000143276.2	6680	41	48499	-2	-55	0	3prime_fragment	FALSE	canonical	3	58	junction_1	12.0369800568452	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGGCCTTGATTTATT	5505	False	NA	9	True	AATAAA	-19	NA	114386338	114388822	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr5_+_114386380_114386644_114386816_114386935_114387073_114387554
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133794	chr5	-	3051	10	FSM	ENSMUSG00000042002.12	ENSMUST00000044790.12	3016	10	-35	0	-35	0	multi-exon	FALSE	canonical	2	4	junction_3	3.91893157523298	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGACTCAGTGTGGA	NA	False	NA	-2	True	AATAAA	-13	NA	114411903	114392224	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_114393812_114394619_114395013_114396568_114396777_114397810_114397908_114398410_114398539_114398926_114399047_114399135_114399264_114401069_114401216_114411033_114411123_114411748
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133804	chr5	-	3068	7	FSM	ENSMUSG00000001098.16	ENSMUST00000001125.6	1026	7	12	-2054	12	-1	multi-exon	FALSE	canonical	3	21	junction_4	38.0379927032025	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCGCCTTCTGGTCTTTTC	NA	False	NA	1	True	AATAAA	-23	NA	114518532	114501628	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_114503928_114505269_114505466_114506402_114506456_114507001_114507092_114508119_114508290_114512956_114513171_114518486
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133806	chr5	-	3105	7	FSM	ENSMUSG00000001098.16	ENSMUST00000102581.11	3103	7	-3	1	-3	-1	multi-exon	FALSE	canonical	3	95	junction_4	16.3401346383682	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCGCCTTCTGGTCTTTTC	NA	False	NA	1	True	AATAAA	-23	NA	114518572	114501628	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_114503928_114505269_114505466_114506402_114506456_114507001_114507089_114508119_114508290_114512956_114513171_114518486
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133818	chr5	+	4974	28	FSM	ENSMUSG00000029577.14	ENSMUST00000074002.12	5194	28	219	1	0	0	multi-exon	TRUE	canonical	3	241	junction_19	27.3486858419916	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTCTGTTCTGGTTTCTA	NA	False	NA	20	True	ATTAAA	-20	NA	114518886	114559229	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133830	chr5	-	2989	9	FSM	ENSMUSG00000029575.18	ENSMUST00000031560.14	3020	9	18	13	18	-13	multi-exon	TRUE	canonical	3	162	junction_1	19.5604032422647	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGCCTGGAAGGATTTG	NA	False	NA	-11	True	AATAAA	-23	NA	114582103	114569107	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_114571420_114573338_114573399_114574539_114574605_114574770_114574869_114575110_114575184_114575878_114575937_114576581_114576676_114580821_114580884_114581936
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133843	chr5	+	1686	11	FSM	ENSMUSG00000041939.15	ENSMUST00000043760.15	1660	11	-26	0	-6	0	multi-exon	FALSE	canonical	3	102	junction_10	13.5410487038486	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGGCCCTGTGGGAAG	NA	False	NA	NA	False	AATAAA	-20	NA	114582340	114598652	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_114582425_114583448_114583541_114584219_114584368_114588337_114588483_114588766_114588923_114590425_114590530_114590940_114590987_114593457_114593549_114593950_114594068_114596955_114597110_114598103
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133852	chr5	+	219	1	Intergenic	novelGene_4140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGTTTGCTCCAAGGC	NA	False	NA	NA	False	AAAAAG	-21	NA	114671763	114671982	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_114671800_114672000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133861	chr5	+	3535	3	FSM	ENSMUSG00000041930.8	ENSMUST00000043650.8	2930	3	-605	0	-605	0	multi-exon	FALSE	canonical	3	54	junction_1	5	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTCAGCTGTGGGTT	NA	False	NA	12	True	AAGAAA	-17	NA	114705471	114751281	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_114706486_114732401_114732529_114748887
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133871	chr5	-	1801	5	FSM	ENSMUSG00000011884.14	ENSMUST00000012028.14	1762	5	-38	-1	-38	1	multi-exon	TRUE	canonical	3	1353	junction_4	27.6541136180497	481	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTGGCGCTTGATT	NA	False	NA	4	True	AATAAA	-30	NA	114829083	114807457	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_114808651_114812114_114812266_114814325_114814460_114815681_114815741_114828819
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133884	chr5	+	177	1	Intergenic	novelGene_4141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGATTAAATAATAA	NA	False	NA	NA	False	NA	NA	NA	114839991	114840168	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_114840000_114840200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133886	chr5	-	218	1	Intergenic	novelGene_4142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTTTTGTTTGGTTTG	8110	False	NA	0	True	NA	NA	NA	114845471	114845253	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_114845300_114845500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133901	chr5	+	2823	13	FSM	ENSMUSG00000002486.16	ENSMUST00000094441.11	2882	13	59	0	0	0	multi-exon	FALSE	canonical	2	32	junction_2	9.3392838174146	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGGCTGTCACTGCTGC	NA	False	NA	15	True	AGTAAA	-18	NA	114845879	114860388	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_114846022_114846714_114846900_114847367_114847579_114849313_114849371_114851484_114851554_114852688_114852863_114853613_114853727_114853895_114853963_114855497_114855671_114856439_114856522_114857639_114857826_114858185_114858330_114859168
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133918	chr5	-	2881	19	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_11	54.7531215638675	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	-2	True	TATAAA	-14	NA	114911570	114867635	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133921	chr5	-	3029	20	FSM	ENSMUSG00000041890.18	ENSMUST00000086564.11	2984	20	-45	0	-12	0	multi-exon	FALSE	canonical	3	71	junction_12	54.5305322490843	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	-2	True	TATAAA	-14	NA	114911568	114867635	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133946	chr5	+	3480	15	FSM	ENSMUSG00000041870.18	ENSMUST00000102578.11	3717	15	237	0	-31	0	multi-exon	FALSE	canonical	3	367	junction_6	30.6590866112599	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGAGTTTCATTTCTC	1083	False	NA	29	True	AGTAAA	-19	NA	114912974	114943883	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_114913386_114924001_114924135_114924745_114924871_114927368_114927415_114929324_114929469_114930160_114930351_114933741_114933809_114934894_114934977_114935913_114935976_114936581_114936713_114937444_114937603_114938765_114938874_114939716_114939878_114941617_114941686_114942289
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133954	chr5	+	3452	15	NIC	ENSMUSG00000041870.18	novel	3717	15	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	45	junction_9	98.811508872774	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTGAGTTTCATTTCT	1113	False	NA	28	True	AGTAAA	-18	NA	114913004	114943882	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_114913386_114924001_114924135_114924745_114924871_114927368_114927415_114929324_114929469_114930160_114930351_114933741_114933809_114934894_114934977_114935913_114935976_114936578_114936713_114937444_114937603_114938765_114938874_114939716_114939878_114941617_114941686_114942289
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133968	chr5	+	197	1	Intergenic	novelGene_4143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAGAAAAAGGAGTTGAAG	3466	False	NA	NA	False	NA	NA	NA	114915357	114915554	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_114915400_114915600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133987	chr5	-	948	2	FSM	ENSMUSG00000072694.9	ENSMUST00000234046.2	947	2	1	-2	1	2	multi-exon	FALSE	canonical	3	282	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTCTTGTGGGTGATTT	9594	False	NA	4	True	NA	NA	NA	114961528	114959993	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_114960787_114961373
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000133998	chr5	+	197	1	Intergenic	novelGene_4144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCTGACATCACAAGATGA	NA	False	NA	22	True	NA	NA	NA	114967466	114967663	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_114967500_114967700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134007	chr5	+	161	1	Intergenic	novelGene_4145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGAAGAAGAAGTTGGTT	2210	False	NA	NA	False	NA	NA	NA	115055674	115055835	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_115055700_115055800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134009	chr5	-	171	1	Intergenic	novelGene_4146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGATAAATCTAAAGTTAAA	NA	False	NA	NA	False	NA	NA	NA	115059786	115059615	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_115059600_115059800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134018	chr5	+	154	1	Intergenic	novelGene_4147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATATATATATATTAG	NA	False	NA	NA	False	NA	NA	NA	115077721	115077875	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_115077700_115077900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134046	chr5	+	243	1	Intergenic	novelGene_4148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGTCTTTAATGTAGC	NA	False	NA	NA	False	NA	NA	NA	115220966	115221209	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_115221000_115221200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134054	chr5	-	178	1	Antisense	novelGene_ENSMUSG00000029550.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATAAAATACAGGCATAG	NA	False	NA	NA	False	NA	NA	NA	115233025	115232847	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr5_-_115232800_115233000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134059	chr5	-	1868	10	FSM	ENSMUSG00000029545.14	ENSMUST00000031524.11	1870	10	2	0	2	0	multi-exon	FALSE	canonical	3	425	junction_3	13.7822573362984	328	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCTGTGTCTGTCTT	9776	False	NA	-4	True	AATAAA	-18	NA	115257403	115248357	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115249834_115249915_115250087_115250298_115250451_115250823_115250936_115251122_115251273_115255623_115255788_115257283
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134073	chr5	+	207	1	Intergenic	novelGene_4149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGAAGGCTCAGTATCT	NA	False	NA	NA	False	AAAACA	-5	NA	115257932	115258139	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_115257900_115258100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134080	chr5	-	3641	5	FSM	ENSMUSG00000046562.6	ENSMUST00000060798.6	3659	5	12	6	12	-6	multi-exon	FALSE	canonical	3	283	junction_1	7.58287544405155	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTTGCCTCCTGATT	NA	False	NA	4	True	AATAAA	-21	NA	115273022	115260614	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_115263560_115265069_115265243_115265360_115265473_115268525_115268640_115272725
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134090	chr5	-	180	1	Intergenic	novelGene_4150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAAGTTGCCTTGGTC	NA	False	NA	NA	False	NA	NA	NA	115276976	115276796	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_115276800_115277000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134103	chr5	-	6009	5	FSM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	-54	0	-54	0	multi-exon	FALSE	canonical	3	1139	junction_2	31.3249102153542	351	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGTGTTGAGAGTGAATT	4670	False	NA	-3	True	AATAAA	-16	NA	115296292	115281039	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134136	chr5	-	179	1	Intergenic	novelGene_4151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGATGTTGTTGTTTTGGT	8252	False	NA	0	True	NA	NA	NA	115340704	115340525	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_115340500_115340700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134147	chr5	+	749	5	ISM	ENSMUSG00000060152.15	ENSMUST00000081497.13	1025	6	2196	19	0	6	3prime_fragment	FALSE	canonical	3	535	junction_1	139.257629952545	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACTTGCCTTGAATGT	NA	False	NA	17	True	AATAAA	-19	NA	115376090	115379031	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr5_+_115376129_115376193_115376337_115378220_115378371_115378531_115378616_115378697
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134153	chr5	+	805	4	NIC	ENSMUSG00000060152.15	novel	1025	6	NA	NA	-6	6	intron_retention	FALSE	canonical	3	770	junction_1	71.2242156073964	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACTTGCCTTGAATGT	NA	False	NA	17	True	AATAAA	-19	NA	115376099	115379031	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_115376337_115378220_115378371_115378531_115378616_115378697
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134162	chr5	-	3121	17	FSM	ENSMUSG00000041740.17	ENSMUST00000112096.9	3112	17	-3	-6	0	6	multi-exon	FALSE	canonical	3	1263	junction_14	135.987361545108	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCCGACAAGCATATTCAT	NA	False	NA	-14	True	AATAAA	-26	NA	115410957	115379822	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134172	chr5	-	3112	17	NIC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_9	471.990052199196	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTTCCCGACAAGCAT	NA	False	NA	-20	True	AATAAA	-20	NA	115410954	115379828	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_115380118_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387233_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134174	chr5	-	3109	17	FSM	ENSMUSG00000041740.17	ENSMUST00000040555.15	3106	17	-3	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	338.888480689076	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTTCCCGACAAGCAT	NA	False	NA	-20	True	AATAAA	-20	NA	115410954	115379828	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_115380118_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134186	chr5	-	3115	17	NNC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	394.244287965913	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTTCCCGACAAGCAT	NA	False	NA	-20	True	AATAAA	-20	NA	115410953	115379828	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387451_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134187	chr5	-	3186	16	NIC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	1263	junction_13	140.36735929537	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTTCCCGACAAGCAT	NA	False	NA	-20	True	AATAAA	-20	NA	115410954	115379828	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134188	chr5	-	3118	17	FSM	ENSMUSG00000041740.17	ENSMUST00000112097.8	3476	17	0	358	0	0	multi-exon	FALSE	canonical	3	78	junction_9	376.541410197803	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTTCCCGACAAGCAT	NA	False	NA	-20	True	AATAAA	-20	NA	115410957	115379828	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387233_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134193	chr5	-	3165	18	NIC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_16	504.425707233134	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTTCCCGACAAGCAT	NA	False	NA	-20	True	AATAAA	-20	NA	115410954	115379828	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115397552_115397606_115398177_115398375_115410315
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134221	chr5	+	2121	7	FSM	ENSMUSG00000041733.11	ENSMUST00000040421.11	2037	7	22	-106	-7	106	multi-exon	FALSE	canonical	3	495	junction_4	23.5442845152137	204	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTGTTGTATTTTGTTT	NA	False	NA	10	True	AGTAAA	-26	NA	115417746	115435137	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_115417974_115421624_115421775_115422449_115422672_115428992_115429100_115432885_115432975_115433724_115433837_115433923
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134230	chr5	-	689	3	FSM	ENSMUSG00000009013.6	ENSMUST00000009157.4	2030	3	30	1311	30	1	multi-exon	FALSE	canonical	3	3784	junction_1	210.5	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGCTAGTTTGTTCAA	NA	False	NA	0	True	AATAAA	-17	NA	115439028	115436479	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_115436893_115438571_115438710_115438890
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134235	chr5	-	834	2	FSM	ENSMUSG00000009013.6	ENSMUST00000112090.2	729	2	-22	-83	0	0	multi-exon	FALSE	canonical	3	3784	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCTAGTTTGTTCA	NA	False	NA	-1	True	AATAAA	-16	NA	115438993	115436480	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_115436893_115438571
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134240	chr5	-	2513	1	FSM	ENSMUSG00000009013.6	ENSMUST00000202980.2	2242	1	-271	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCTAGTTTGTTCA	NA	False	NA	-1	True	AATAAA	-16	NA	115438993	115436480	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_115436500_115439000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134246	chr5	+	1277	4	FSM	ENSMUSG00000029538.15	ENSMUST00000031513.14	1162	4	-112	-3	-112	3	multi-exon	FALSE	canonical	3	1733	junction_1	69.0700127889569	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGCAGTTGTCTTTGATT	22	False	NA	42	True	AATATA	-21	NA	115465123	115471142	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_115465559_115468556_115468718_115470175_115470349_115470634
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134257	chr5	-	2217	3	FSM	ENSMUSG00000029536.9	ENSMUST00000139167.3	1797	3	4	-424	4	424	multi-exon	FALSE	canonical	3	122	junction_1	3.5	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCCTAAGACTCTAATCAA	9713	False	NA	NA	False	AAGAAA	-11	NA	115479233	115470873	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_115472654_115473525_115473630_115478900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134267	chr5	+	1063	2	FSM	ENSMUSG00000029535.5	ENSMUST00000031508.5	1088	2	9	16	9	-16	multi-exon	FALSE	canonical	3	209	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTGCTCCCAAAACCCT	2423	False	NA	28	True	AATAAA	-20	NA	115479292	115481612	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_115479477_115480733
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134277	chr5	-	581	3	FSM	ENSMUSG00000041697.10	ENSMUST00000040154.10	571	3	-10	0	-10	0	multi-exon	FALSE	canonical	3	7177	junction_2	62.5	525	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGACGGTACGATTTTAT	4844	False	NA	-26	True	AATAAA	-26	NA	115487050	115483700	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_115483986_115486623_115486767_115486897
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134292	chr5	+	201	1	Intergenic	novelGene_4152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGCGTGGTGGCGCATG	904	False	NA	NA	False	NA	NA	NA	115491231	115491432	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_115491200_115491400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134294	chr5	+	3130	15	FSM	ENSMUSG00000054256.12	ENSMUST00000150779.8	3133	15	3	0	3	0	multi-exon	FALSE	canonical	3	46	junction_12	14.3358050392173	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTTATTCATGTGTG	2392	False	NA	15	True	AATAAA	-15	NA	115567660	115593757	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_115567866_115568035_115568077_115568681_115568764_115568862_115568948_115571910_115571953_115573512_115573606_115576771_115576821_115578543_115578627_115579386_115579505_115583453_115583535_115585188_115585246_115588273_115588343_115588845_115589034_115589515_115589580_115591884
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134300	chr5	+	3089	15	NIC	ENSMUSG00000054256.12	novel	3133	15	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_12	16.062378404209	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTTATTCATGTGTG	2400	False	NA	15	True	AATAAA	-15	NA	115567668	115593757	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_115567866_115568035_115568077_115568681_115568764_115568862_115568948_115571910_115571953_115573512_115573606_115576771_115576821_115578543_115578627_115579386_115579505_115583453_115583535_115585188_115585246_115588273_115588343_115588878_115589034_115589515_115589580_115591884
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134308	chr5	+	245	1	Intergenic	novelGene_4153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCCAGCACTTGGGAGGA	NA	False	NA	NA	False	NA	NA	NA	115601524	115601769	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_115601500_115601800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134320	chr5	+	804	5	NNC	ENSMUSG00000029522.13	novel	557	4	NA	NA	-1167	-2	at_least_one_novel_splicesite	FALSE	canonical	3	2118	junction_4	157.856540884437	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTGGTGATTGTTATC	NA	False	NA	28	True	AATAAA	-19	NA	115603153	115612779	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_+_115603279_115604200_115604380_115608840_115609001_115610051_115610180_115612567
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134333	chr5	+	630	4	NNC	ENSMUSG00000029522.13	novel	557	4	NA	NA	-1156	-5	at_least_one_novel_splicesite	FALSE	canonical	3	341	junction_2	947.073738769409	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTTGGTGATTGTT	NA	False	NA	25	True	AATAAA	-16	NA	115603164	115612776	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_+_115603279_115604200_115604380_115610051_115610180_115612567
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134340	chr5	+	784	5	NNC	ENSMUSG00000029522.13	novel	387	4	NA	NA	-1153	-5	at_least_one_novel_splicesite	FALSE	canonical	3	175	junction_2	919.936546724827	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTTGGTGATTGTT	NA	False	NA	25	True	AATAAA	-16	NA	115603167	115612776	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_+_115603279_115604200_115604380_115608843_115609001_115610051_115610180_115612567
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134355	chr5	+	198	1	Intergenic	novelGene_4154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	361	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTCAGGGGCTGGGGCTG	7301	False	NA	NA	False	NA	NA	NA	115639346	115639544	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_115639300_115639500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134363	chr5	+	210	1	Intergenic	novelGene_4155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTCAGGATCATCATTGA	7512	False	NA	NA	False	NA	NA	NA	115639557	115639767	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_115639600_115639800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134368	chr5	+	3705	11	FSM	ENSMUSG00000029528.20	ENSMUST00000067268.15	3706	11	1	0	1	0	multi-exon	FALSE	canonical	3	245	junction_6	21.5722043379901	283	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATGTTATTTCTTGGGA	NA	False	NA	19	True	AATAAA	-23	NA	115644735	115694046	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_115644928_115682401_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689909_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134396	chr5	+	1347	6	NIC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	-24	-212	intron_retention	FALSE	canonical	3	6763	junction_5	6890.1060833633	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGGTCTGGATTTATTTA	NA	False	NA	25	True	AATAAA	-19	NA	115697571	115701574	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_115697948_115698799_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134423	chr5	+	2260	6	FSM	ENSMUSG00000029518.16	ENSMUST00000031492.15	2820	6	-18	578	-18	-578	multi-exon	FALSE	canonical	3	206	junction_5	16.4438438328756	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCTCCACTTGTCCA	NA	False	NA	17	True	AATAAA	-19	NA	115769948	115785217	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_115770258_115775774_115775826_115778138_115778263_115781426_115781552_115781633_115781759_115783691
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134439	chr5	+	189	1	Intergenic	novelGene_4156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTGGGCTGGAGAGATG	NA	False	NA	NA	False	NA	NA	NA	115802311	115802500	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_115802300_115802500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134449	chr5	+	224	1	Intergenic	novelGene_4157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTTTGTATCTTGATTT	NA	False	NA	NA	False	TTTAAA	-27	NA	115802506	115802730	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_115802500_115802700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134456	chr5	+	182	1	Intergenic	novelGene_4158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATATTTTATTAG	NA	False	NA	NA	False	NA	NA	NA	115836737	115836919	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_115836700_115836900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134466	chr5	+	177	1	Intergenic	novelGene_4159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAGATTTATTTAAGT	5751	False	NA	NA	False	NA	NA	NA	115914465	115914642	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_115914500_115914600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134468	chr5	+	195	1	Intergenic	novelGene_4160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTCATGGTA	NA	False	NA	NA	False	NA	NA	NA	115972324	115972519	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_115972300_115972500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134526	chr5	-	1238	4	FSM	ENSMUSG00000032959.13	ENSMUST00000036951.13	1240	4	7	-5	7	5	multi-exon	FALSE	canonical	0	0	junction_2	1275.14783456664	504	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGGTATTTCCTTCCTGT	NA	False	NA	-12	True	AATAAA	-20	NA	117425683	117420713	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_117421531_117423785_117423887_117424199_117424310_117425473
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134533	chr5	+	196	1	Intergenic	novelGene_4161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACTTCTCAAAATTGCAT	9902	False	NA	NA	False	NA	NA	NA	117427600	117427796	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_117427600_117427800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134541	chr5	+	4025	10	FSM	ENSMUSG00000066894.15	ENSMUST00000111967.8	4236	10	213	-2	4	2	multi-exon	FALSE	canonical	2	11	junction_3	6.48264539813992	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTATGGTCTTGATTT	NA	False	NA	5	True	AATAAA	-21	NA	117457360	117493072	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_117457569_117461564_117461646_117462917_117463200_117472832_117473133_117476271_117476527_117481790_117482079_117486359_117486471_117487948_117487965_117489629_117489857_117490815
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134548	chr5	+	2444	9	FSM	ENSMUSG00000029364.16	ENSMUST00000031309.16	2421	9	-21	-2	-21	2	multi-exon	FALSE	canonical	3	560	junction_4	52.4760361974873	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCTGTTCTTTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	117495347	117516668	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117509286_117512177_117512279_117513833_117514007_117514561_117514673_117514755_117514864_117515454
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134583	chr5	+	175	1	Intergenic	novelGene_4162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTTTTGTTCCTGAATT	NA	False	NA	NA	False	NA	NA	NA	117627221	117627396	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_117627200_117627400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134587	chr5	-	203	1	Intergenic	novelGene_4163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCATGTTTTGGTAAAATA	NA	False	NA	NA	False	AAGAAA	-9	NA	117641646	117641443	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_117641400_117641600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134589	chr5	+	183	1	Intergenic	novelGene_4164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGTGGTGGTGGTACAT	NA	False	NA	NA	False	NA	NA	NA	117960375	117960558	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_117960400_117960600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134593	chr5	+	196	1	Intergenic	novelGene_4165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGGAGCATGGCGAGGAA	7077	False	NA	NA	False	NA	NA	NA	118059686	118059882	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_118059700_118059900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134603	chr5	+	3902	12	FSM	ENSMUSG00000032898.10	ENSMUST00000035579.10	3883	12	-18	-1	-8	0	multi-exon	FALSE	canonical	3	306	junction_9	49.846707161818	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGTGACCTGCCCGCTT	NA	False	NA	11	True	AATAAA	-22	NA	118114830	118148266	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138402_118138594_118140079_118140238_118146074
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134608	chr5	+	3921	12	FSM	ENSMUSG00000032898.10	ENSMUST00000202447.4	3959	12	38	0	-6	0	multi-exon	FALSE	canonical	3	123	junction_9	98.2366008780135	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGTGACCTGCCCGCTT	NA	False	NA	11	True	AATAAA	-22	NA	118114832	118148266	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138381_118138594_118140079_118140238_118146074
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134625	chr5	-	3392	11	FSM	ENSMUSG00000032867.9	ENSMUST00000049474.9	5000	11	0	1608	0	-1608	multi-exon	FALSE	canonical	3	339	junction_8	26.290682760248	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGCCCTGTGTAGTCTG	NA	False	NA	11	True	NA	NA	NA	118293529	118204637	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_118206295_118206669_118206781_118208410_118208585_118215641_118215770_118230560_118230768_118233597_118233795_118251676_118251835_118263000_118263090_118266873_118267039_118280732_118280838_118293128
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134636	chr5	+	5396	2	FSM	ENSMUSG00000046607.7	ENSMUST00000054836.7	5382	2	-14	0	-14	0	multi-exon	FALSE	canonical	3	61	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGCCTCTGTGTGTTTT	NA	False	NA	NA	False	TTTAAA	-21	NA	118307798	118327543	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_118308194_118322542
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134660	chr5	+	216	1	Intergenic	novelGene_4166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTCATGGAGGCATCGGA	NA	False	NA	NA	False	TTTAAA	-6	NA	118520200	118520416	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_118520200_118520400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134663	chr5	+	205	1	Intergenic	novelGene_4167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	401	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACACTGGCTGCTCTTGCA	NA	False	NA	NA	False	NA	NA	NA	118581110	118581315	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_118581100_118581300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134677	chr5	+	175	1	Intergenic	novelGene_4168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAACTTTAAAAAATATAT	NA	False	NA	NA	False	NA	NA	NA	119654159	119654334	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_119654200_119654300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134685	chr5	-	175	1	Intergenic	novelGene_4169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGATTTATTTATTTTAT	NA	False	NA	NA	False	NA	NA	NA	119717002	119716827	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_119716800_119717000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134687	chr5	+	191	1	Intergenic	novelGene_4170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTCAAAGTAGCGTGGT	NA	False	NA	NA	False	NA	NA	NA	119723570	119723761	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_119723600_119723800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134731	chr5	+	2896	2	ISM	ENSMUSG00000018604.19	ENSMUST00000018748.9	4856	8	9246	0	15	0	3prime_fragment	FALSE	canonical	3	1076	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGAAGTTGTGGTAATG	NA	False	NA	22	True	AATAAA	-16	NA	119818328	119822789	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr5_+_119819131_119820695
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134740	chr5	-	230	1	Intergenic	novelGene_4171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTAAAATAACGTTGCC	NA	False	NA	NA	False	TTTAAA	-3	NA	119847860	119847630	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_119847600_119847900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134753	chr5	-	205	1	Intergenic	novelGene_4172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCCATGACCAACCCCAA	NA	False	NA	NA	False	NA	NA	NA	119869882	119869677	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_119869700_119869900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134760	chr5	+	3989	24	FSM	ENSMUSG00000029594.13	ENSMUST00000031590.12	4010	24	21	0	21	0	multi-exon	FALSE	canonical	3	93	junction_16	11.5488606136917	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGATGTCACTCTGTCAC	NA	False	NA	21	True	AATAAA	-31	NA	120254550	120337046	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_120254715_120256724_120256908_120257696_120257817_120257959_120257996_120258161_120258367_120260957_120261215_120262215_120262297_120262758_120262838_120264238_120264311_120265029_120265231_120266248_120266380_120268774_120268894_120269218_120269316_120270198_120270310_120270906_120271108_120271825_120271947_120278268_120278439_120278601_120278663_120279615_120279696_120281441_120281498_120282061_120282179_120313923_120314030_120324282_120324404_120335946
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134785	chr5	+	167	1	Intergenic	novelGene_4173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAGATAAAAAGGCTT	2485	False	NA	NA	False	NA	NA	NA	120651826	120651993	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_120651800_120652000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134797	chr5	-	2347	3	FSM	ENSMUSG00000029600.11	ENSMUST00000031599.9	1573	3	-774	0	-774	0	multi-exon	FALSE	canonical	3	77	junction_2	1.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTAGTGTGTTACTTTTT	5541	False	NA	NA	False	ATTAAA	-20	NA	120751428	120747122	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_120748028_120749442_120749795_120750338
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134815	chr5	+	2975	20	NNC	ENSMUSG00000029599.14	novel	4322	20	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_12	124.927059050882	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGGAGTGTGGCTTCCT	NA	False	NA	27	True	AATAAA	-18	NA	120751179	120765692	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761642_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134824	chr5	-	185	1	Intergenic	novelGene_4174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	209	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAATCAAATAATAATAATA	385	False	NA	NA	False	NA	NA	NA	120777261	120777076	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_120777100_120777300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134842	chr5	-	1905	6	ISM	ENSMUSG00000029603.16	ENSMUST00000145174.8	2961	8	11947	0	-541	0	3prime_fragment	FALSE	canonical	3	95	junction_3	14.7051011557214	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGCCTTTTTCTGCCAA	NA	False	NA	-19	True	AATAAA	-15	NA	120821521	120818267	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr5_-_120819538_120820185_120820276_120820368_120820531_120820644_120820804_120821125_120821188_120821359
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134849	chr5	-	227	1	Intergenic	novelGene_4175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGTGTATCCTCTGGTC	NA	False	NA	NA	False	NA	NA	NA	120992259	120992032	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_120992000_120992300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134859	chr5	-	2256	6	ISM	ENSMUSG00000066861.15	ENSMUST00000086368.12	1977	7	459	580	459	0	3prime_fragment	FALSE	canonical	3	61	junction_5	127.706851813049	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAACTCTGAGGA	NA	False	NA	NA	False	AATAAA	-19	NA	121025186	121014784	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr5_-_121015091_121015245_121015273_121016383_121016538_121017162_121017396_121019947_121020133_121023835
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134884	chr5	-	3969	6	NIC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	17	-463	intron_retention	FALSE	canonical	3	208	junction_1	174.069641235915	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAACTCTGAGGA	NA	False	NA	NA	False	AATAAA	-19	NA	121045567	121034781	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_121035088_121035242_121035270_121036381_121036536_121037135_121040118_121043658_121043948_121045356
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134888	chr5	-	1467	7	FSM	ENSMUSG00000052776.11	ENSMUST00000080322.8	1885	7	-45	463	-45	-463	multi-exon	FALSE	canonical	3	208	junction_1	161.447015732372	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAACTCTGAGGA	NA	False	NA	NA	False	AATAAA	-19	NA	121045629	121034781	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_121035088_121035242_121035270_121036381_121036536_121037135_121037369_121039932_121040118_121043658_121043948_121045356
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134893	chr5	-	5640	16	FSM	ENSMUSG00000043733.15	ENSMUST00000100770.9	5599	16	-41	0	-41	0	multi-exon	TRUE	canonical	3	69	junction_6	9.90263713473448	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCATTTGGTCTGTTGT	811	False	NA	0	True	AATAAA	-23	NA	121329501	121268595	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_121272210_121272798_121272890_121275479_121275593_121281065_121281218_121281624_121281693_121282592_121282748_121287165_121287298_121290274_121290434_121290537_121290618_121292492_121292590_121300771_121300886_121301200_121301318_121302557_121302751_121305911_121306107_121310043_121310167_121329264
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134917	chr5	+	1787	6	NIC	ENSMUSG00000029614.14	novel	1270	7	NA	NA	-3	1	intron_retention	FALSE	canonical	3	14010	junction_2	1238.46727853424	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTCCTTTTTGTGT	NA	False	NA	2	True	ATTAAA	-16	NA	121342605	121347030	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_121343727_121343816_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346844
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134930	chr5	+	1015	7	NNC	ENSMUSG00000029614.14	novel	486	4	NA	NA	19	1	at_least_one_novel_splicesite	FALSE	canonical	3	184	junction_1	6047.1114224525	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTCCTTTTTGTGT	NA	False	NA	2	True	ATTAAA	-16	NA	121342627	121347030	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_+_121342719_121343468_121343727_121343816_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346844
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134936	chr5	+	184	1	Intergenic	novelGene_4176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATTAGACCTTAAG	NA	False	NA	4	True	NA	NA	NA	121351486	121351670	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_121351500_121351700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134946	chr5	-	177	1	Intergenic	novelGene_4177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAATTCTCAGCCGG	NA	False	NA	NA	False	NA	NA	NA	121356249	121356072	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_121356100_121356200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134960	chr5	-	205	1	Intergenic	novelGene_4178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAGAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	121416479	121416274	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_121416300_121416500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000134971	chr5	+	193	1	Intergenic	novelGene_4179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAACCACATGGTGGC	8083	False	NA	NA	False	NA	NA	NA	121514993	121515186	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_121515000_121515200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135001	chr5	+	220	1	Intergenic	novelGene_4180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTAGCTAGTCTGGTCT	NA	False	NA	NA	False	NA	NA	NA	121595049	121595269	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_121595000_121595300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135017	chr5	-	2022	13	FSM	ENSMUSG00000029455.15	ENSMUST00000031411.15	3867	13	195	1650	-47	201	multi-exon	TRUE	canonical	3	476	junction_10	93.9036148872283	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGAGTCTTATCTCTGTT	NA	False	NA	3	True	AATAAA	-45	NA	121731692	121705739	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_121706087_121706988_121707104_121708666_121708825_121710079_121710245_121710738_121710924_121711485_121711589_121713153_121713268_121713958_121714088_121714519_121714632_121716405_121716486_121717666_121717808_121718676_121718782_121731424
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135026	chr5	-	3644	21	FSM	ENSMUSG00000029456.13	ENSMUST00000111770.2	3626	21	-16	-2	-16	0	multi-exon	FALSE	canonical	3	24	junction_2	12.9348366823861	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTTCTGAGCTAGATTT	NA	False	NA	-5	True	NA	NA	NA	121798593	121759088	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_121759443_121760052_121760131_121760741_121760886_121764110_121764284_121765327_121765487_121767963_121768055_121768160_121768299_121768707_121768849_121769339_121769741_121770551_121770726_121772739_121772886_121775306_121775458_121777186_121777369_121780674_121780744_121783431_121783574_121784764_121784925_121785897_121786057_121787416_121787612_121790018_121790168_121794076_121794277_121798355
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135041	chr5	+	3731	12	FSM	ENSMUSG00000029458.15	ENSMUST00000031414.15	3744	12	5	8	5	0	multi-exon	TRUE	canonical	3	111	junction_6	24.4408545656822	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTACGTTTGAGTCTGAA	912	False	NA	12	True	AATAAA	-22	NA	121798630	121825311	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_121798912_121800062_121800225_121801358_121801555_121803161_121803352_121810147_121810262_121813292_121813442_121816826_121816903_121817273_121817413_121817879_121817990_121820842_121820933_121822433_121822538_121823191
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135052	chr5	+	4061	23	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-69	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	57.0768837723033	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	824	False	NA	4	True	TTTAAA	-7	NA	121849853	121953013	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121952400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135078	chr5	+	4023	23	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	58.0259987326855	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	868	False	NA	4	True	TTTAAA	-7	NA	121849897	121953013	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121952400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135118	chr5	+	187	1	Intergenic	novelGene_4181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGACACACCTATCTATC	1656	False	NA	NA	False	NA	NA	NA	122208466	122208653	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_122208500_122208700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135132	chr5	-	182	1	Intergenic	novelGene_4182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTGGTCTACAGAGTG	NA	False	NA	NA	False	NA	NA	NA	122286084	122285902	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_122285900_122286100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135155	chr5	+	2552	6	FSM	ENSMUSG00000004455.17	ENSMUST00000128309.8	2492	6	-60	0	18	0	multi-exon	FALSE	canonical	3	2504	junction_1	193.218425622403	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTCGTGTCTTTCTGTC	NA	False	NA	-1	True	ATTAAA	-15	NA	122296358	122313332	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311344_122312117
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135169	chr5	+	5987	4	NIC	ENSMUSG00000004455.17	novel	2492	6	NA	NA	-18	0	intron_retention	FALSE	canonical	3	2504	junction_1	202.501577497285	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTCGTGTCTTTCTGTC	NA	False	NA	-1	True	ATTAAA	-15	NA	122296400	122313332	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_122296679_122306237_122306370_122306981_122311344_122312117
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135192	chr5	-	182	1	Intergenic	novelGene_4183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCACTGAAAACTAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	122404291	122404109	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_122404100_122404300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135197	chr5	+	190	1	Intergenic	novelGene_4184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAGTAATGACGATGATG	NA	False	NA	NA	False	NA	NA	NA	122421002	122421192	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_122421000_122421200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135200	chr5	+	4658	6	FSM	ENSMUSG00000038582.16	ENSMUST00000053426.15	4644	6	-14	0	-14	0	multi-exon	FALSE	canonical	3	149	junction_2	9.11262859991561	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCACTCCTTTGGTTTG	NA	False	NA	24	True	AATAAA	-37	NA	122422413	122462344	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_122422973_122446193_122446374_122451657_122451857_122455173_122455298_122457776_122457907_122458878
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135217	chr5	+	208	1	Intergenic	novelGene_4185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAGGCATGTGCTAACCAA	NA	False	NA	NA	False	NA	NA	NA	122472618	122472826	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_122472600_122472800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135218	chr5	+	2694	4	FSM	ENSMUSG00000029462.19	ENSMUST00000155671.8	2716	4	22	0	6	0	multi-exon	FALSE	canonical	3	1453	junction_1	367.656844837078	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTGTATGGGTGTTT	701	False	NA	11	True	AATAAA	-24	NA	122492453	122503047	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_122492540_122498075_122498268_122500098_122500335_122500867
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135224	chr5	+	1011	5	FSM	ENSMUSG00000029462.19	ENSMUST00000118830.8	1014	5	6	-3	6	3	multi-exon	FALSE	canonical	3	527	junction_1	833.067074130289	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTGAAAACCTGTGTT	701	False	NA	20	True	AATAAA	-20	NA	122492453	122501352	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_122492540_122494856_122494869_122498075_122498268_122500098_122500335_122500867
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135267	chr5	+	2293	11	FSM	ENSMUSG00000029466.12	ENSMUST00000031422.10	2751	11	0	458	0	-458	multi-exon	FALSE	canonical	3	226	junction_7	29.6310647800581	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGAGACTCTTCCTTT	NA	False	NA	30	True	AATAAA	-26	NA	122560506	122582517	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148_122578374_122579352_122579504_122581866
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135291	chr5	-	4553	20	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	-51	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	284.082622291629	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGTTCTTAATG	7226	False	NA	-16	True	AATAAA	-25	NA	122640339	122594390	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599921_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135300	chr5	-	181	1	FSM	ENSMUSG00000105970.2	ENSMUST00000197656.2	2887	1	1216	1490	1216	-1490	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGAAAAGGTCTTTA	NA	False	NA	NA	False	NA	NA	NA	122631755	122631574	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_122631600_122631800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135306	chr5	-	2952	19	FSM	ENSMUSG00000029469.15	ENSMUST00000031426.14	2950	19	-4	2	-4	-2	multi-exon	FALSE	canonical	3	41	junction_3	9.90510530540242	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCTCTTTTTACTTCA	1239	False	NA	NA	False	ATTAAA	-18	NA	122752585	122688268	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_122689267_122693559_122693606_122697217_122697304_122697759_122697832_122698721_122698809_122705323_122705414_122706973_122707103_122710702_122710853_122729142_122729290_122731112_122731209_122732587_122732752_122738502_122738588_122740330_122740442_122740747_122740814_122745030_122745121_122747235_122747417_122748140_122748245_122749005_122749171_122752500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135314	chr5	+	198	1	Intergenic	novelGene_4186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATACCAACTGGAGTCTG	3817	False	NA	NA	False	NA	NA	NA	122711790	122711988	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_122711800_122712000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135322	chr5	+	185	1	Intergenic	novelGene_4187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGGAAAGGCATAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	122797235	122797420	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_122797200_122797400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135337	chr5	-	2040	13	ISM	ENSMUSG00000029471.14	ENSMUST00000199830.5	3139	14	8	2732	8	-2732	5prime_fragment	TRUE	canonical	3	28	junction_4	15.8190725251374	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGGAATGTCACTCAGT	4641	False	NA	-22	True	AATAAA	-16	NA	122917454	122881413	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr5_-_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135347	chr5	+	188	1	FSM	ENSMUSG00000105613.2	ENSMUST00000199279.2	6573	1	3134	3251	3134	-3251	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATAATTTCAGGCCTGGC	NA	False	NA	NA	False	NA	NA	NA	122920721	122920909	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_122920700_122920900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135361	chr5	-	2707	17	FSM	ENSMUSG00000029472.14	ENSMUST00000200645.5	2404	17	-31	-272	14	0	multi-exon	FALSE	canonical	3	855	junction_8	345.39967790952	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCATCCTCTTAAATC	NA	False	NA	NA	False	AATAAA	-2	NA	122959388	122925521	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938657_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135364	chr5	-	2744	17	FSM	ENSMUSG00000029472.14	ENSMUST00000086216.9	2760	17	16	0	16	0	multi-exon	TRUE	canonical	3	1165	junction_8	284.126264845403	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCATCCTCTTAAATC	NA	False	NA	NA	False	AATAAA	-2	NA	122959386	122925521	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135381	chr5	-	2423	17	FSM	ENSMUSG00000029472.14	ENSMUST00000199406.5	2413	17	-6	-4	1	0	multi-exon	FALSE	canonical	3	167	junction_3	528.705609099951	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGGGTTTTTTTTTAT	NA	False	NA	-19	True	AATAAA	-20	NA	122959349	122925785	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_122926082_122926364_122926528_122929670_122929799_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135386	chr5	-	2374	17	NIC	ENSMUSG00000029472.14	novel	2413	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	167	junction_3	560.644519587724	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGAAGTGGGTTTTTTT	NA	False	NA	-23	True	AATAAA	-16	NA	122959343	122925789	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_122926082_122926364_122926528_122929670_122929799_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938657_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135388	chr5	-	2409	17	FSM	ENSMUSG00000029472.14	ENSMUST00000197074.5	2413	17	0	4	0	0	multi-exon	FALSE	canonical	3	46	junction_8	522.501461570922	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGAAGTGGGTTTTTTT	NA	False	NA	-23	True	AATAAA	-16	NA	122959343	122925789	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938672_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135397	chr5	+	191	1	Intergenic	novelGene_4188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGGAGGGCTCACCTG	NA	False	NA	NA	False	NA	NA	NA	122972418	122972609	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_122972400_122972600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135405	chr5	+	1983	6	FSM	ENSMUSG00000029474.8	ENSMUST00000031434.8	4440	6	111	2346	2	-2346	multi-exon	FALSE	canonical	3	187	junction_1	16.3389106124001	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTAGTTTAATATTGTT	625	False	NA	9	True	AATAAA	-16	NA	122988221	123007008	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_122988362_122999751_122999971_123002049_123002458_123004864_123004970_123005182_123005385_123006099
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135414	chr5	+	1716	5	NIC	ENSMUSG00000029474.8	novel	4440	6	NA	NA	50	-2346	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	85.4005269304587	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTAGTTTAATATTGTT	673	False	NA	9	True	AATAAA	-16	NA	122988269	123007008	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_122988362_123002049_123002458_123004864_123004970_123005182_123005385_123006099
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135418	chr5	-	3656	13	NIC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	-37	1	intron_retention	FALSE	canonical	3	58	junction_12	99.7441170640599	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTTTGAGGGTTTCT	NA	False	NA	NA	False	TATAAA	-25	NA	123060207	123008726	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123059967
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135453	chr5	-	176	1	Intergenic	novelGene_4189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAGGAGGGAGCAGAGAT	877	False	NA	NA	False	NA	NA	NA	123181840	123181664	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_123181700_123181800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135457	chr5	+	178	1	Intergenic	novelGene_4190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTGTTTGTTTAGTT	NA	False	NA	NA	False	NA	NA	NA	123209250	123209428	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_123209200_123209400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135466	chr5	+	1722	12	FSM	ENSMUSG00000054434.15	ENSMUST00000067505.15	2164	12	25	417	25	323	multi-exon	FALSE	canonical	3	93	junction_3	11.7768508046945	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTTGTCTCTTGCCTT	NA	False	NA	29	True	NA	NA	NA	123214362	123255395	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_123214559_123236237_123236357_123237899_123238017_123239687_123239748_123240316_123240413_123242484_123242575_123252164_123252231_123252630_123252693_123253162_123253256_123253723_123253789_123254264_123254334_123254706
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135474	chr5	-	152	1	ISM	ENSMUSG00000104606.2	ENSMUST00000195921.2	2162	2	2030	706	2030	-706	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATAAGAAAAATGATCT	NA	False	NA	NA	False	NA	NA	NA	123327621	123327469	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr5_-_123327500_123327600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135476	chr5	-	152	1	NIC	ENSMUSG00000104606.2	novel	2162	2	NA	NA	1304	-1432	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATAAGAAAAATGATCT	NA	False	NA	NA	False	NA	NA	NA	123328347	123328195	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_123328200_123328300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135482	chr5	+	198	1	Intergenic	novelGene_4191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGATGGGCTCTTTCAAT	7616	False	NA	NA	False	NA	NA	NA	123352547	123352745	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_123352500_123352700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135487	chr5	+	1366	6	FSM	ENSMUSG00000029440.16	ENSMUST00000100729.9	2597	6	62	1169	-6	435	multi-exon	FALSE	canonical	3	158	junction_2	18.6868938028769	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGCTGTCAGTATATTC	NA	False	NA	23	True	NA	NA	NA	123366314	123387025	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_123366508_123372656_123372760_123377604_123377814_123379894_123379997_123384256_123384346_123386355
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135497	chr5	+	4852	3	ISM	ENSMUSG00000029438.10	ENSMUST00000120593.5	4161	8	13728	2132	13062	-2132	3prime_fragment	FALSE	canonical	3	31	junction_1	3	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGACTCTGGCCACAACT	6309	False	NA	NA	False	NA	NA	NA	123495624	123510013	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr5_+_123499422_123507395_123507518_123509080
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135507	chr5	-	1561	6	FSM	ENSMUSG00000029433.17	ENSMUST00000111587.10	1576	6	15	0	15	0	multi-exon	FALSE	canonical	3	603	junction_3	53.1902246658162	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGTTTTCAGAATTGTT	8937	False	NA	-12	True	AATAAA	-25	NA	123662224	123649767	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135536	chr5	-	186	1	Intergenic	novelGene_4192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTACATTGTGATTAACTC	7581	False	NA	NA	False	NA	NA	NA	123676753	123676567	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_123676600_123676800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135541	chr5	+	193	1	Intergenic	novelGene_4193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCACACTTCAAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	123749399	123749592	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_123749400_123749600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135551	chr5	+	195	1	Intergenic	novelGene_4194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGCATATCGATCGCAGC	161	False	NA	NA	False	NA	NA	NA	123809802	123809997	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_123809800_123810000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135559	chr5	-	2175	10	FSM	ENSMUSG00000029422.16	ENSMUST00000182309.8	1595	10	2	-582	0	1	multi-exon	FALSE	canonical	3	403	junction_7	46.2523939987681	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTGTATGCTATTTGCT	4323	False	NA	NA	False	AATAAA	-16	NA	123887475	123866487	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123887351
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135577	chr5	-	2020	12	NIC	ENSMUSG00000029422.16	novel	2344	12	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	72	junction_7	199.263561501216	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGTTAATTTAAGTTAC	4354	False	NA	-4	True	AATAAA	-17	NA	123887444	123866782	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123880841_123880920_123881700_123881742_123883017_123883175_123883559_123883653_123887351
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135616	chr5	+	209	1	Intergenic	novelGene_4195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGTTAGAGCAAGTTGT	640	False	NA	NA	False	NA	NA	NA	124033198	124033407	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_124033200_124033400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135625	chr5	+	2245	8	FSM	ENSMUSG00000023106.16	ENSMUST00000023869.15	2339	8	74	20	-20	-20	multi-exon	FALSE	canonical	3	1477	junction_4	100.760982082372	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGTGAAGTTAAAAATGAAA	9052	False	NA	NA	False	NA	NA	NA	124045311	124066878	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_124045430_124046162_124046278_124053253_124053274_124055262_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135632	chr5	-	183	1	Intergenic	novelGene_4196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTAAACTCCTTTATGTTT	8459	False	NA	NA	False	NA	NA	NA	124075016	124074833	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_124074800_124075000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135639	chr5	+	197	1	FSM	ENSMUSG00000061882.13	ENSMUST00000197673.2	4470	1	647	3626	647	-3626	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTCATTTAAGTTAGAC	NA	False	NA	NA	False	NA	NA	NA	124101337	124101534	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_124101300_124101500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135645	chr5	+	4349	32	FSM	ENSMUSG00000000915.16	ENSMUST00000000939.15	6735	32	28	2358	28	1512	multi-exon	TRUE	canonical	3	34	junction_6	6.64046185222248	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGCCCTAGTGAGGGCC	NA	False	NA	3	True	AATAAA	-17	NA	124111718	124141263	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_124111919_124127367_124127432_124127653_124127797_124127999_124128057_124129004_124129086_124129500_124129578_124129806_124129869_124132780_124132922_124133958_124134017_124134101_124134178_124134293_124134435_124134582_124134645_124134833_124134907_124134993_124135178_124135266_124135356_124135426_124135544_124135613_124135716_124135920_124136116_124136848_124136997_124137104_124137192_124137545_124137654_124137833_124137971_124138202_124138314_124138408_124138468_124138664_124138696_124138774_124138838_124139054_124139156_124139268_124139375_124139487_124139612_124139693_124139756_124139850_124140058_124140180
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135653	chr5	-	2537	4	FSM	ENSMUSG00000066278.7	ENSMUST00000040967.9	2522	4	-15	0	-15	0	multi-exon	FALSE	canonical	3	122	junction_3	15.8394724940223	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTGTGTTTCTCTCAT	2221	False	NA	-1	True	AATAAA	-20	NA	124170348	124142703	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_124144802_124145671_124145755_124148750_124148923_124170164
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135672	chr5	+	1216	5	FSM	ENSMUSG00000029404.16	ENSMUST00000031351.11	1192	5	-21	-3	-11	3	multi-exon	FALSE	canonical	3	507	junction_1	46.874833333037	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTGTTGCATTTTGT	NA	False	NA	27	True	ATTAAA	-20	NA	124254140	124256262	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_124254675_124254977_124255257_124255333_124255452_124255892_124255963_124256047
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135686	chr5	-	204	1	Intergenic	novelGene_4197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGCCGGGCGTGGTGGCA	NA	False	NA	NA	False	NA	NA	NA	124314134	124313930	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_124313900_124314100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135697	chr5	+	184	1	Intergenic	novelGene_4198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACCTGGAGTCCTATGAA	1412	False	NA	NA	False	NA	NA	NA	124452731	124452915	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_124452700_124452900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135712	chr5	-	1440	4	FSM	ENSMUSG00000029394.12	ENSMUST00000031341.11	1315	4	-142	17	-142	-17	multi-exon	FALSE	canonical	3	1091	junction_3	81.9308651648856	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTACGATGTGGAATCT	4112	False	NA	-15	True	AATAAA	-21	NA	124492876	124483496	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_124484218_124486663_124486791_124488140_124488236_124492379
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135723	chr5	-	184	1	Intergenic	novelGene_4199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGCTGGAGAGATGGCTA	NA	False	NA	NA	False	NA	NA	NA	124499295	124499111	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_124499100_124499300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135731	chr5	-	10056	31	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	3	-3	combination_of_known_junctions	TRUE	canonical	3	243	junction_29	68.980423954111	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTGTGGTGTTGTGGTT	NA	False	NA	46	True	AATAAA	-18	NA	124563670	124506767	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563509
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135750	chr5	-	5271	30	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	0	1370	combination_of_known_splicesites	FALSE	canonical	3	14	junction_28	102.010514484529	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGTGGACTCTTGTTTAG	NA	False	NA	NA	False	AATAAA	-17	NA	124563655	124511224	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124552461_124552591_124563509
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135752	chr5	-	5685	32	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	1	1370	combination_of_known_junctions	FALSE	canonical	3	34	junction_29	112.134674493331	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGTGGACTCTTGTTTAG	NA	False	NA	NA	False	AATAAA	-17	NA	124563654	124511224	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548443_124551247_124551353_124552461_124552591_124563509
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135755	chr5	-	5704	32	FSM	ENSMUSG00000038095.16	ENSMUST00000199808.5	10161	32	3	4454	3	1370	multi-exon	FALSE	canonical	3	126	junction_29	101.260073560108	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGTGGACTCTTGTTTAG	NA	False	NA	NA	False	AATAAA	-17	NA	124563670	124511224	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124551247_124551353_124552461_124552591_124563509
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135758	chr5	-	5581	31	Fusion	ENSMUSG00000038095.16_ENSMUSG00002076658.1	novel	4170	31	NA	NA	0	1370	multi-exon	FALSE	canonical	3	85	junction_29	90.1802454347218	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGTGGACTCTTGTTTAG	NA	False	NA	NA	False	AATAAA	-17	NA	124563655	124511224	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548443_124552461_124552591_124563509
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135770	chr5	+	187	1	Intergenic	novelGene_4200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATGGGATTCTCCGGAC	8927	False	NA	NA	False	NA	NA	NA	124539641	124539828	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_124539600_124539800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135779	chr5	-	176	1	Intergenic	novelGene_4201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	249	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAGAAAGAAAACC	5525	False	NA	NA	False	NA	NA	NA	124573564	124573388	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_124573400_124573600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135789	chr5	+	2768	8	FSM	ENSMUSG00000049327.18	ENSMUST00000059580.11	2739	8	-25	-4	-25	4	multi-exon	FALSE	canonical	3	194	junction_1	242.120647949045	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGTTGTTGTTAATAA	NA	False	NA	33	True	AATAAA	-42	NA	124577967	124600375	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_124578079_124584031_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135804	chr5	-	210	1	Intergenic	novelGene_4202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGTGATAGAAACGAAGTA	NA	False	NA	NA	False	NA	NA	NA	124579613	124579403	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_124579400_124579600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135807	chr5	-	265	1	Intergenic	novelGene_4203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCCGTCTCATACCTAT	NA	False	NA	NA	False	AATAAA	-30	NA	124582001	124581736	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_124581700_124582000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135819	chr5	+	2810	7	FSM	ENSMUSG00000049327.18	ENSMUST00000100709.7	1425	7	-33	-1352	-33	4	multi-exon	FALSE	canonical	3	345	junction_1	170.424388578109	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGTTGTTGTTAATAA	4363	False	NA	33	True	AATAAA	-42	NA	124583522	124600375	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_124583792_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135831	chr5	+	2861	7	ISM	ENSMUSG00000049327.18	ENSMUST00000147969.8	2112	8	256	-765	-23	0	3prime_fragment	FALSE	canonical	3	338	junction_1	172.952787392012	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGTTGTTGTTGTTA	4664	False	NA	29	True	AATAAA	-38	NA	124583823	124600371	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr5_+_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135842	chr5	+	174	1	Intergenic	novelGene_4204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATAAGAAAGCCTTCAGGG	5770	False	NA	NA	False	NA	NA	NA	124604545	124604719	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_124604500_124604700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135853	chr5	-	200	1	Intergenic	novelGene_4205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTTATTCATTTTCCCC	NA	False	NA	NA	False	NA	NA	NA	124612830	124612630	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_124612600_124612800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135879	chr5	+	195	1	Intergenic	novelGene_4206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTATAGCACCATGCCCA	NA	False	NA	NA	False	NA	NA	NA	124677684	124677879	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_124677700_124677900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135886	chr5	+	2024	4	FSM	ENSMUSG00000029390.14	ENSMUST00000060226.11	2074	4	50	0	50	0	multi-exon	FALSE	canonical	3	3477	junction_2	89.3395520223577	1161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGTTTTATATTAATG	NA	False	NA	12	True	AATAAA	-22	NA	124678807	124688569	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_124679105_124681034_124681228_124684958_124685067_124687143
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135894	chr5	+	3924	3	NIC	ENSMUSG00000029390.14	novel	2074	4	NA	NA	77	-3	intron_retention	FALSE	canonical	3	3477	junction_1	42	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTTGTGTTTTATATTA	NA	False	NA	9	True	AATAAA	-19	NA	124678834	124688566	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_124681228_124684958_124685067_124687143
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135903	chr5	+	2096	14	FSM	ENSMUSG00000029389.18	ENSMUST00000071057.14	2799	14	16	687	11	-687	multi-exon	FALSE	canonical	3	73	junction_5	12.5669803088427	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTGTAATTCCTAT	NA	False	NA	2	True	NA	NA	NA	124690942	124707036	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_124691103_124692605_124692657_124692733_124692821_124694819_124694912_124695024_124695088_124696084_124696235_124697190_124697381_124698780_124698864_124699968_124700101_124700652_124700746_124704443_124704559_124704896_124705066_124705897_124706191_124706618
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135913	chr5	-	1553	9	FSM	ENSMUSG00000029388.15	ENSMUST00000031334.15	2013	9	22	438	22	-438	multi-exon	FALSE	canonical	0	0	junction_4	226.339761199839	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGTATTGCCTCTCTAAG	NA	False	NA	-3	True	AATAAA	-19	NA	124717172	124708713	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_124709418_124709823_124709950_124711140_124711217_124711748_124711818_124712660_124712774_124714860_124714978_124715078_124715216_124716499_124716602_124717063
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135916	chr5	-	1765	9	NIC	ENSMUSG00000029388.15	novel	2013	9	NA	NA	6	-440	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	291.131172111473	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACGGTATTGCCTCTCTA	NA	False	NA	-5	True	AATAAA	-17	NA	124717089	124708715	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_124709418_124709823_124709950_124711140_124711217_124711748_124711818_124712660_124712774_124714860_124714978_124715078_124715216_124716499_124716602_124716766
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135930	chr5	+	1843	13	FSM	ENSMUSG00000029387.11	ENSMUST00000031333.4	2672	13	-5	834	-5	259	multi-exon	FALSE	canonical	3	570	junction_1	79.1684210331928	340	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTAGAGTGTTTTTCT	NA	False	NA	24	True	AATAAA	-25	NA	124717197	124734909	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_124717265_124720510_124720591_124721996_124722104_124722198_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135954	chr5	+	2415	18	FSM	ENSMUSG00000118662.2	ENSMUST00000239501.2	2735	18	40	280	2	-280	multi-exon	TRUE	canonical	3	31	junction_8	6.97499240366195	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTAGTGTTAAGTGAACG	NA	False	NA	34	True	AATAAA	-24	NA	124736851	124765523	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_124737020_124737197_124737306_124737769_124737847_124740077_124740274_124741810_124741912_124745798_124745996_124746581_124746706_124748332_124748475_124750706_124750773_124753213_124753349_124754531_124754610_124757093_124757172_124758176_124758289_124761069_124761177_124762380_124762538_124763745_124763872_124763959_124764049_124765169
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135961	chr5	+	196	1	Intergenic	novelGene_4207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGTTAAAACATAGCTGG	NA	False	NA	NA	False	NA	NA	NA	124747541	124747737	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_124747500_124747700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135969	chr5	+	5346	20	FSM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	-1	0	-1	0	multi-exon	TRUE	canonical	3	142	junction_14	17.8821937464506	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTAGTTTTCTTGTGAT	NA	False	NA	10	True	AATAAA	-21	NA	124767115	124801519	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135980	chr5	-	186	1	Intergenic	novelGene_4208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAATAATAATACTAAAT	NA	False	NA	NA	False	NA	NA	NA	124773144	124772958	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_124773000_124773100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135984	chr5	+	178	1	Intergenic	novelGene_4209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAAAAGCACAGAT	6637	False	NA	NA	False	NA	NA	NA	124803010	124803188	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_124803000_124803200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000135988	chr5	-	2249	4	FSM	ENSMUSG00000037979.14	ENSMUST00000036206.14	2473	4	227	-3	227	3	multi-exon	FALSE	canonical	3	158	junction_3	9.0921211313239	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGGTGGTTCAGGTTTG	NA	False	NA	NA	False	NA	NA	NA	124939261	124911478	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_124913356_124916006_124916049_124916724_124916872_124939078
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136004	chr5	+	4090	4	FSM	ENSMUSG00000079215.9	ENSMUST00000111417.9	4092	4	7	-5	7	5	multi-exon	FALSE	canonical	3	206	junction_3	10.2089285540757	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCCTGTGTGGTGTATG	NA	False	NA	13	True	NA	NA	NA	124939761	124965699	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_124939947_124940417_124940573_124961771_124961837_124962014
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136018	chr5	+	172	1	Intergenic	novelGene_4210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACAGTATCGGCCTCGA	NA	False	NA	NA	False	NA	NA	NA	124994156	124994328	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_124994200_124994300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136028	chr5	-	204	2	Intergenic	novelGene_4211	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGGCCAGAAGCCTTT	NA	False	NA	NA	False	NA	NA	NA	125357952	125295712	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_125295771_125357806
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136040	chr5	-	2407	12	FSM	ENSMUSG00000037936.16	ENSMUST00000111390.8	2367	12	-36	-4	-13	2	multi-exon	TRUE	canonical	3	487	junction_1	58.8981471316135	199	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTTCTGTGACTGTTTT	NA	False	NA	1	True	AATAAA	-23	NA	125418171	125354148	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_125354930_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136053	chr5	+	206	1	Intergenic	novelGene_4212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAGGAAGGTAAACTAGC	NA	False	NA	NA	False	NA	NA	NA	125438569	125438775	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_125438600_125438800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136064	chr5	-	216	1	Intergenic	novelGene_4213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATTTTGTGCTGTTTT	NA	False	NA	0	True	TTTAAA	-13	NA	125443063	125442847	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_125442800_125443100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136068	chr5	-	183	1	Intergenic	novelGene_4214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGAGGGGGGCTGGAGA	NA	False	NA	NA	False	TTTAAA	-3	NA	125443989	125443806	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_125443800_125444000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136076	chr5	-	2298	1	ISM	ENSMUSG00000008348.10	ENSMUST00000136312.2	2618	2	1752	0	924	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1317	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTTGTTGGTTGGTTC	NA	False	NA	0	True	AATAAA	-26	NA	125465326	125463028	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr5_-_125463000_125465300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136084	chr5	-	2352	2	FSM	ENSMUSG00000008348.10	ENSMUST00000136312.2	2618	2	260	6	260	6	multi-exon	FALSE	canonical	3	916	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCATTTGTGTTGTTGGT	NA	False	NA	-6	True	AATAAA	-20	NA	125466818	125463034	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_125465329_125466760
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136097	chr5	-	207	1	Intergenic	novelGene_4215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTCCTAAGACTTGGG	NA	False	NA	NA	False	AATAAA	-10	NA	125509556	125509349	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_125509300_125509600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136101	chr5	+	1217	3	FSM	ENSMUSG00000037905.14	ENSMUST00000049040.14	6473	3	-14	5270	-14	374	multi-exon	FALSE	canonical	3	373	junction_1	23.5	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGAAGGGAACGCTTGA	NA	False	NA	34	True	AATAAA	-26	NA	125518617	125532164	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_125518957_125528733_125528837_125531389
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136129	chr5	+	184	1	Intergenic	novelGene_4216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATGAATGTTTTACCC	NA	False	NA	NA	False	NA	NA	NA	125595640	125595824	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_125595600_125595800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136141	chr5	-	2736	8	FSM	ENSMUSG00000029416.18	ENSMUST00000031367.15	2732	8	-4	0	-2	0	multi-exon	FALSE	canonical	3	79	junction_6	13.4346490805814	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGAGCTTCCTGATGGTT	NA	False	NA	-5	True	TATAAA	-18	NA	127694484	127672727	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_127673837_127677483_127677643_127678921_127679078_127680756_127680926_127681174_127681253_127681601_127681771_127685835_127686126_127693878
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136143	chr5	-	2655	8	FSM	ENSMUSG00000029416.18	ENSMUST00000153832.8	2673	8	21	-3	-16	0	multi-exon	FALSE	canonical	3	33	junction_6	28.9418840620514	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGAGCTTCCTGATGGTT	NA	False	NA	-5	True	TATAAA	-18	NA	127694461	127672727	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_127673837_127677483_127677643_127678921_127679078_127680756_127680926_127681174_127681253_127681601_127681713_127685835_127686126_127693878
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136164	chr5	+	223	1	Intergenic	novelGene_4217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTGGGGACCAATGTGA	NA	False	NA	NA	False	AATAAA	-33	NA	128032224	128032447	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_128032200_128032400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136171	chr5	+	195	1	Intergenic	novelGene_4218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGAGGAGGAAGAGGAAG	NA	False	NA	NA	False	NA	NA	NA	128665146	128665341	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_128665100_128665300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136176	chr5	+	3294	1	FSM	ENSMUSG00000081683.6	ENSMUST00000117102.4	3250	1	-37	-7	-37	7	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGTGCATTGGTGAGG	NA	False	NA	21	True	AATAAA	-24	NA	128677870	128681164	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_128677900_128681200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136182	chr5	-	2896	11	FSM	ENSMUSG00000029428.14	ENSMUST00000031378.14	2939	11	43	0	4	0	multi-exon	FALSE	canonical	3	41	junction_2	6.30555310817378	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTGTGCCTCCTCATTG	NA	False	NA	NA	False	ATTAAA	-27	NA	129085595	129061620	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_129063495_129064781_129064907_129065865_129065977_129068027_129068166_129068266_129068341_129069243_129069353_129070558_129070633_129071859_129071935_129073425_129073526_129076573_129076652_129085457
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136196	chr5	+	184	1	Intergenic	novelGene_4219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGTAAGCCCACAGTACT	NA	False	NA	15	True	NA	NA	NA	129080781	129080965	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_129080800_129081000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136212	chr5	+	1108	7	NNC	ENSMUSG00000029430.14	novel	2377	7	NA	NA	-2	-1157	at_least_one_novel_splicesite	FALSE	canonical	3	123	junction_1	5645.42574912547	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGAATCATCCCTTGCT	473	False	NA	NA	False	AATAAA	-23	NA	129097263	129100230	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_+_129097343_129097572_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136227	chr5	+	1291	6	FSM	ENSMUSG00000029430.14	ENSMUST00000111343.2	2423	6	-25	1157	-25	-1157	multi-exon	FALSE	canonical	3	14794	junction_4	293.478040064329	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGAATCATCCCTTGCT	520	False	NA	NA	False	AATAAA	-23	NA	129097310	129100230	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136233	chr5	+	1037	7	NNC	ENSMUSG00000029430.14	novel	2423	6	NA	NA	0	-1157	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_1	5667.76133544414	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGAATCATCCCTTGCT	545	False	NA	NA	False	AATAAA	-23	NA	129097335	129100230	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_+_129097363_129097591_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136245	chr5	+	189	1	Intergenic	novelGene_4220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTGTCTGGCTGCATTG	NA	False	NA	NA	False	NA	NA	NA	129107866	129108055	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_129107900_129108100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136249	chr5	+	193	1	Intergenic	novelGene_4221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCAGGTAAGGATGGGGT	NA	False	NA	NA	False	NA	NA	NA	129231892	129232085	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_129231900_129232100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136250	chr5	+	3201	12	ISM	ENSMUSG00000044017.17	ENSMUST00000056617.14	5163	26	65841	-5	65834	5	3prime_fragment	FALSE	canonical	3	43	junction_2	8.40306909693916	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGAGCGTCACAATCTG	4618	False	NA	34	True	AATAAA	-22	NA	129239654	129281668	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr5_+_129239733_129248869_129248994_129255112_129255217_129256232_129256345_129256606_129256761_129265389_129265457_129266696_129266764_129275681_129275774_129277743_129277871_129278195_129278238_129278519_129278613_129279527
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136259	chr5	+	3069	11	NIC	ENSMUSG00000044017.17	novel	5163	26	NA	NA	65837	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	16.6180624622728	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAGTCTTGAGCGTCACA	4621	False	NA	29	True	AATAAA	-17	NA	129239657	129281663	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_129239733_129255112_129255217_129256232_129256345_129256606_129256761_129265389_129265457_129266696_129266764_129275681_129275774_129277743_129277871_129278195_129278238_129278519_129278613_129279527
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136263	chr5	+	3305	18	FSM	ENSMUSG00000029439.15	ENSMUST00000053737.9	3313	18	8	0	8	0	multi-exon	FALSE	canonical	3	56	junction_11	20.649823847033	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGGCTCTCCTTCTTC	NA	False	NA	16	True	AATAAA	-29	NA	129578292	129648448	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_129578661_129581046_129581217_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620444_129626517_129626749_129627760_129627952_129631506_129631773_129637743_129637870_129646704_129646879_129647539_129647613_129648065
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136340	chr5	-	174	1	Intergenic	novelGene_4222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTAAAAAATATATGTATA	NA	False	NA	NA	False	NA	NA	NA	129840092	129839918	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_129839900_129840100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136344	chr5	-	1196	6	ISM	ENSMUSG00000029446.15	ENSMUST00000031399.13	1733	8	8162	-2	-74	2	3prime_fragment	FALSE	canonical	3	674	junction_1	180.962537559573	266	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTAGTTTTAAGTGAAT	NA	False	NA	0	True	ATTAAA	-24	NA	129856351	129842619	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr5_-_129842963_129843482_129843632_129846302_129846449_129847669_129847805_129848539_129848697_129856085
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136372	chr5	+	208	1	Genic_Genomic	ENSMUSG00000029447.14	novel	NA	NA	NA	NA	983	5	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACTAGTTTGAATACTTT	NA	False	NA	NA	False	NA	NA	NA	129867924	129868132	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr5_+_129867900_129868100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136386	chr5	+	1669	9	FSM	ENSMUSG00000025538.16	ENSMUST00000171300.8	2264	9	-21	616	-21	2	multi-exon	FALSE	canonical	3	460	junction_6	14.1371629049113	184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTTATTATAT	NA	False	NA	18	True	AATAAA	-18	NA	129875805	129892275	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_129875928_129878741_129878899_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129891479
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136394	chr5	+	193	1	Intergenic	novelGene_4223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGGGTCTTCCTACTTC	NA	False	NA	NA	False	NA	NA	NA	129890610	129890803	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_129890600_129890800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136401	chr5	-	909	4	FSM	ENSMUSG00000070493.4	ENSMUST00000094280.4	915	4	6	0	6	0	multi-exon	FALSE	canonical	3	5311	junction_3	452.984424554409	963	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTAGCGTCCTTATTGT	2070	False	NA	-3	True	AATAAA	-18	NA	129916305	129909996	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_129910238_129911269_129911421_129912774_129913025_129916038
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136414	chr5	+	192	1	Intergenic	novelGene_4224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGGAGCGGCTGGAGA	665	False	NA	NA	False	NA	NA	NA	129919223	129919415	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_129919200_129919400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136419	chr5	+	179	1	Intergenic	novelGene_4225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGAAGCTGCTGCTGGA	1701	False	NA	NA	False	NA	NA	NA	129920259	129920438	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_129920300_129920400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136425	chr5	+	2458	4	FSM	ENSMUSG00000034173.14	ENSMUST00000041466.14	2492	4	34	0	-11	0	multi-exon	FALSE	canonical	3	34	junction_3	2120.04764097414	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTGTCTCAAAAAAAATTT	6039	False	NA	NA	False	AATAAA	-17	NA	129924597	129932464	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_129924694_129928023_129928274_129929185_129929337_129930503
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136446	chr5	+	4839	3	FSM	ENSMUSG00000066735.9	ENSMUST00000073945.6	650	3	-78	-4111	-60	-2	multi-exon	FALSE	canonical	3	55	junction_1	420.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTGTGCTGCCATCGTT	NA	False	NA	11	True	AATAAA	-18	NA	129970889	130015531	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_129971069_130007359_130007470_130010981
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136464	chr5	-	2519	12	FSM	ENSMUSG00000025534.18	ENSMUST00000026613.14	2687	12	168	0	0	0	multi-exon	TRUE	canonical	3	83	junction_6	16.6092675514317	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTCTTTCGTTACTATC	NA	False	NA	NA	False	NA	NA	NA	130031722	130017851	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_130018529_130018857_130018994_130022258_130022436_130024287_130024373_130026620_130026768_130026857_130027037_130027250_130027395_130028181_130028370_130028767_130028911_130029201_130029384_130029597_130029784_130031447
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136473	chr5	+	183	1	Intergenic	novelGene_4226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCAACTTCCATTTCTT	NA	False	NA	NA	False	NA	NA	NA	130020552	130020735	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_130020600_130020700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136521	chr5	+	193	1	Intergenic	novelGene_4227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAAATGTAGTCTCCC	NA	False	NA	NA	False	NA	NA	NA	130185858	130186051	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_130185900_130186100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136536	chr5	+	2667	9	FSM	ENSMUSG00000025340.15	ENSMUST00000119797.8	2690	9	23	0	-3	0	multi-exon	FALSE	canonical	3	81	junction_3	33.6962535009458	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTTTGTTTTGTTTCTG	NA	False	NA	21	True	AATAAA	-43	NA	130200661	130243183	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_130200736_130216241_130216428_130219717_130219885_130226790_130226958_130235849_130235932_130237526_130237660_130239264_130239357_130240702_130240960_130241674
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136540	chr5	+	2666	9	NIC	ENSMUSG00000025340.15	novel	2690	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	67	junction_3	37.9637985454564	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTTTGTTTTGTTTCTG	NA	False	NA	21	True	AATAAA	-43	NA	130200665	130243183	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_130200736_130216241_130216428_130219717_130219885_130226787_130226958_130235849_130235932_130237526_130237660_130239264_130239357_130240702_130240960_130241674
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136548	chr5	+	182	1	Intergenic	novelGene_4228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTGCAGAATATGTGT	NA	False	NA	NA	False	NA	NA	NA	130235526	130235708	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_130235500_130235700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136557	chr5	+	3601	7	FSM	ENSMUSG00000053094.16	ENSMUST00000111298.6	3570	7	-31	0	-31	0	multi-exon	FALSE	canonical	3	519	junction_4	20.4042479237372	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTGCCGTTTTAATTC	8986	False	NA	14	True	AATAAA	-15	NA	130251144	130272507	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_130251414_130258289_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136567	chr5	-	1550	5	FSM	ENSMUSG00000025337.11	ENSMUST00000026387.11	1548	5	-2	0	-2	0	multi-exon	FALSE	canonical	3	697	junction_4	74.8765650921568	233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCTTGCATTTCTAGT	NA	False	NA	0	True	AATAAA	-17	NA	130284373	130274571	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_130275303_130277126_130277292_130279654_130279856_130282779_130282910_130284050
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136580	chr5	+	2506	16	NIC	ENSMUSG00000056310.15	novel	4698	9	NA	NA	0	-406	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	68.4530658350831	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTGGCTTTGTCCTTAC	3512	False	NA	20	True	AATAAA	-23	NA	130284459	130369998	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_130284487_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136585	chr5	+	3419	16	FSM	ENSMUSG00000056310.15	ENSMUST00000040213.13	3044	16	-1	-374	-1	374	multi-exon	FALSE	canonical	3	235	junction_10	31.6406208676266	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCTGTTACATTGCAT	4927	False	NA	NA	False	NA	NA	NA	130285874	130370778	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136605	chr5	+	215	1	Intergenic	novelGene_4229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGGTGTATCTCAGGAA	NA	False	NA	NA	False	NA	NA	NA	131974866	131975081	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_131974900_131975100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136616	chr5	+	566	1	FSM	ENSMUSG00000058905.6	ENSMUST00000145209.2	414	1	-43	-109	-43	109	mono-exon	FALSE	NA	NA	NA	NA	NA	376	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCCCAGCAGGCAGGAAT	NA	False	NA	NA	False	NA	NA	NA	133503918	133504484	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_133503900_133504500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136624	chr5	-	2326	11	FSM	ENSMUSG00000061979.9	ENSMUST00000076228.3	2321	11	-5	0	-5	0	multi-exon	FALSE	canonical	3	313	junction_2	26.6850145212627	326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGACTTGATCATTTCTT	NA	False	NA	4	True	AATAAA	-42	NA	134205618	134176892	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_134177846_134182962_134183049_134184578_134184753_134186429_134186518_134192462_134192645_134194177_134194263_134195503_134195556_134197050_134197118_134198056_134198186_134200685_134200816_134205238
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136650	chr5	-	4258	32	NIC	ENSMUSG00000060261.17	novel	4302	33	NA	NA	-1	0	combination_of_known_junctions	TRUE	canonical	3	46	junction_23	92.9314137344788	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTCTTTTCCTGCTGTC	653	False	NA	-3	True	AATAAA	-31	NA	134343582	134266687	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136651	chr5	-	4246	32	NIC	ENSMUSG00000060261.17	novel	4455	35	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_23	87.7984282082411	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTCTTTTCCTGCTGTC	653	False	NA	-3	True	AATAAA	-31	NA	134343582	134266687	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136663	chr5	-	4369	34	FSM	ENSMUSG00000060261.17	ENSMUST00000111261.12	4381	34	15	-3	-4	0	multi-exon	FALSE	canonical	3	228	junction_23	69.7198249746108	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTCTTTTCCTGCTGTC	650	False	NA	-3	True	AATAAA	-31	NA	134343585	134266687	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136672	chr5	-	4383	34	NIC	ENSMUSG00000060261.17	novel	4455	35	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	192	junction_8	75.7046966966276	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTCTTTTCCTGCTGTC	648	False	NA	-3	True	AATAAA	-31	NA	134343587	134266687	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136702	chr5	+	241	1	Intergenic	novelGene_4230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCAAACTTGAGGCAGGT	NA	False	NA	NA	False	NA	NA	NA	134356577	134356818	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_134356600_134356800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136730	chr5	-	3547	30	FSM	ENSMUSG00000023079.15	ENSMUST00000171794.9	3524	30	-28	5	-28	0	multi-exon	FALSE	canonical	3	127	junction_8	45.8592169193566	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGCGTCACTTTTTTTT	NA	False	NA	NA	False	AGTAAA	-16	NA	134485598	134386514	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136740	chr5	-	3535	31	NIC	ENSMUSG00000023079.15	novel	3572	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_30	59.8322562577151	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAAGCGTCACTTTTTT	NA	False	NA	NA	False	AGTAAA	-14	NA	134485110	134386516	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134484965
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136747	chr5	+	179	1	Intergenic	novelGene_4231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTAAGCGGCACTTG	NA	False	NA	6	True	NA	NA	NA	134558303	134558482	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_134558300_134558500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136777	chr5	+	207	1	Intergenic	novelGene_4232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGTGCTGGAAACTACCTC	NA	False	NA	NA	False	NA	NA	NA	134645370	134645577	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_134645400_134645600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136784	chr5	-	2441	7	FSM	ENSMUSG00000040731.14	ENSMUST00000202622.4	2726	7	134	151	-9	5	multi-exon	FALSE	canonical	3	761	junction_3	647.667803224256	229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCTTTCTGGCCACT	10012	False	NA	1	True	AATAAA	-23	NA	134668210	134648725	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_134650503_134650802_134650941_134653294_134653355_134654219_134654317_134654394_134654460_134656441_134656630_134668094
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136817	chr5	-	221	1	Intergenic	novelGene_4233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACACCTCTTTGAATTGAA	4387	False	NA	NA	False	NA	NA	NA	134665994	134665773	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_134665800_134666000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136820	chr5	-	261	1	Intergenic	novelGene_4234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAATCTTAAAAAAAA	5265	False	NA	NA	False	NA	NA	NA	134683379	134683118	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_134683100_134683400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136822	chr5	-	3332	16	FSM	ENSMUSG00000029674.14	ENSMUST00000015137.10	3331	16	-14	13	-14	-12	multi-exon	FALSE	canonical	2	10	junction_14	3.46794848097065	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGGGGCTTGCATCCTCGT	5752	False	NA	-13	True	AATAAA	-20	NA	134717466	134684905	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_134686240_134686346_134686505_134686762_134686819_134688700_134688858_134690646_134690713_134690956_134691017_134693038_134693171_134694060_134694148_134694683_134694868_134697767_134697935_134698043_134698150_134699171_134699379_134701524_134701635_134701865_134702005_134715497_134715595_134717194
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136829	chr5	+	193	1	Intergenic	novelGene_4235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTGAGCCACATTCCCA	NA	False	NA	NA	False	NA	NA	NA	134767282	134767475	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_134767300_134767500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136844	chr5	-	1847	1	FSM	ENSMUSG00000047501.4	ENSMUST00000051401.4	1816	1	-35	4	-35	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	499	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGGGCTGTTCTCTATC	NA	False	NA	-13	True	AATAAA	-21	NA	134975823	134973976	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_134974000_134975800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136856	chr5	-	178	1	Intergenic	novelGene_4236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAAAAAAAAGGATTTGT	9454	False	NA	NA	False	NA	NA	NA	134999395	134999217	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_134999200_134999400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136863	chr5	+	1220	1	FSM	ENSMUSG00000070473.5	ENSMUST00000094245.4	1259	1	40	-1	40	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGGAGCTTCCTTATC	5081	False	NA	39	True	AATAAA	-19	NA	135015107	135016327	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_135015100_135016300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136866	chr5	+	1148	6	FSM	ENSMUSG00000040532.15	ENSMUST00000046999.12	1493	6	340	5	-52	0	multi-exon	FALSE	canonical	3	445	junction_1	65.8634952003004	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGATCCGTTTTCACC	NA	False	NA	10	True	AATAAA	-17	NA	135038492	135041024	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_135038694_135038835_135038972_135039740_135039915_135040063_135040235_135040337_135040520_135040740
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136876	chr5	+	1266	5	FSM	ENSMUSG00000040532.15	ENSMUST00000154469.8	1473	5	207	0	-28	0	multi-exon	FALSE	canonical	3	552	junction_3	34.8926926447358	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGATCCGTTTTCACC	NA	False	NA	10	True	AATAAA	-17	NA	135038516	135041024	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_135038972_135039740_135039915_135040063_135040235_135040337_135040520_135040740
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136903	chr5	-	1320	12	ISM	ENSMUSG00000005378.18	ENSMUST00000085984.11	1516	13	544	0	-32	0	3prime_fragment	FALSE	canonical	3	942	junction_2	58.9567708278386	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTCCCTGGCCCTGCA	NA	False	NA	-1	True	ATTAAA	-16	NA	135092976	135081810	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr5_-_135082279_135082402_135082493_135084881_135084941_135085192_135085239_135085695_135085782_135086473_135086525_135087960_135088058_135089587_135089685_135089926_135090010_135090102_135090199_135092737_135092776_135092867
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136925	chr5	+	5585	7	FSM	ENSMUSG00000005374.14	ENSMUST00000153183.8	7488	7	16	1887	-13	-1887	multi-exon	FALSE	canonical	3	208	junction_3	17.4610678049451	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGACTCCCTGGTGGTC	9506	False	NA	16	True	NA	NA	NA	135178526	135192727	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_135178719_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136951	chr5	+	6515	19	FSM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	-21	-2	-21	2	multi-exon	FALSE	canonical	3	180	junction_5	50.9896201008077	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGCTTTGATGTTTCCTT	NA	False	NA	43	True	AATAAA	-29	NA	135216096	135274985	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843_135234046_135237896_135238019_135239594_135239793_135245443_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136967	chr5	-	2320	1	FSM	ENSMUSG00000049551.3	ENSMUST00000062572.3	2293	1	-26	-1	-26	1	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGTTCTATCTGGGC	NA	False	NA	-1	True	AATAAA	-14	NA	135280110	135277790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_135277800_135280100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136975	chr5	-	188	1	Intergenic	novelGene_4237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	298	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAACTTAAATGAAAATTGA	NA	False	NA	NA	False	NA	NA	NA	135311354	135311166	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_135311200_135311400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000136994	chr5	-	1444	9	FSM	ENSMUSG00000040013.12	ENSMUST00000044972.11	1447	9	3	0	2	0	multi-exon	FALSE	canonical	3	793	junction_1	94.8445273856114	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCAGTACAATTCATTG	NA	False	NA	-1	True	AATAAA	-20	NA	135378895	135320557	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_135320966_135366468_135366562_135368331_135368442_135368775_135368971_135373502_135373623_135374943_135375147_135376730_135376821_135378471_135378590_135378788
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137005	chr5	-	1280	8	FSM	ENSMUSG00000040013.12	ENSMUST00000201534.2	1287	8	8	-1	8	1	multi-exon	FALSE	canonical	3	922	junction_1	63.5022095067951	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTCATTAGTGTGACAC	NA	False	NA	-2	True	ATTAAA	-25	NA	135378889	135366218	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_135366562_135368331_135368442_135368775_135368971_135373502_135373623_135374943_135375147_135376730_135376821_135378471_135378590_135378788
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137017	chr5	+	2255	10	FSM	ENSMUSG00000000916.16	ENSMUST00000000940.15	2243	10	-5	-7	-5	0	multi-exon	FALSE	canonical	3	253	junction_9	22.1966519552993	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAAATATTTTTTTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	135398801	135405659	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_135398931_135399044_135399168_135400094_135400270_135400351_135400461_135402807_135402947_135403037_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137028	chr5	-	5601	13	FSM	ENSMUSG00000053293.10	ENSMUST00000111171.6	5580	13	-20	-1	-20	1	multi-exon	FALSE	canonical	3	173	junction_6	20.4224481610038	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTTTGCCCTTTATTT	NA	False	NA	-4	True	AATAAA	-19	NA	135423420	135404993	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_135407029_135407488_135407612_135409773_135411391_135411924_135412099_135412480_135412584_135412692_135412818_135412946_135413021_135413706_135413799_135415677_135415850_135417490_135417572_135420475_135420635_135421163_135421380_135422790
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137062	chr5	+	196	1	Intergenic	novelGene_4238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGAAAAGGGGGCTGGCA	6891	False	NA	NA	False	NA	NA	NA	135696089	135696285	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_135696100_135696300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137070	chr5	+	2530	16	FSM	ENSMUSG00000005514.15	ENSMUST00000005651.13	2636	16	109	-3	-13	3	multi-exon	FALSE	canonical	3	231	junction_9	23.2776478384069	276	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGTGTTGATTGAGTTT	2010	False	NA	17	True	AATAAA	-17	NA	135717998	135764183	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_135718107_135744725_135744918_135757515_135757565_135758252_135758382_135759082_135759233_135759697_135759823_135759946_135760037_135760416_135760516_135761336_135761454_135761539_135761659_135762355_135762538_135762626_135762777_135762880_135763152_135763236_135763383_135763474_135763561_135763666
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137079	chr5	-	218	1	Intergenic	novelGene_4239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGCCACTGGAATAACAAC	NA	False	NA	NA	False	TTTAAA	-1	NA	135719872	135719654	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_135719700_135719900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137088	chr5	+	205	1	Intergenic	novelGene_4240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	458	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATATCAACCAACCAAGCT	5673	False	NA	NA	False	NA	NA	NA	135721661	135721866	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_135721700_135721900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137098	chr5	-	1401	12	FSM	ENSMUSG00000039886.9	ENSMUST00000043378.9	1559	12	163	-5	-77	5	multi-exon	FALSE	canonical	3	674	junction_10	35.0345756018723	209	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTGTGGATGTGTTTGC	5226	False	NA	1	True	AATAAA	-26	NA	135773139	135764333	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_135764660_135764750_135764820_135764923_135764989_135765107_135765201_135765294_135765357_135765450_135765517_135765599_135765690_135765771_135765868_135766043_135766104_135770819_135770937_135771134_135771254_135772901
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137122	chr5	+	180	1	Intergenic	novelGene_4241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAACAAAAGACTGTGCA	NA	False	NA	NA	False	NA	NA	NA	135824208	135824388	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_135824200_135824400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137126	chr5	+	204	1	Intergenic	novelGene_4242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGAAACATAAACATTTTA	3391	False	NA	NA	False	NA	NA	NA	135866439	135866643	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_135866400_135866600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137133	chr5	-	182	1	Intergenic	novelGene_4243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTGTGGAGATTTTGAG	3601	False	NA	NA	False	TTTAAA	-3	NA	135907975	135907793	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_135907800_135908000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137138	chr5	+	932	3	FSM	ENSMUSG00000004951.11	ENSMUST00000005077.7	903	3	-29	0	-29	0	multi-exon	FALSE	canonical	3	2181	junction_2	11	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGACTCCAGAGTTATTA	NA	False	NA	7	True	AATAAA	-25	NA	135916743	135918417	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_135917289_135917902_135917967_135918094
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137164	chr5	+	196	1	Intergenic	novelGene_4244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTTCATGGGGCTAGAG	NA	False	NA	NA	False	AATAAA	-40	NA	135976686	135976882	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_135976700_135976900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137166	chr5	+	2511	10	FSM	ENSMUSG00000004947.16	ENSMUST00000111145.10	2493	10	-10	-8	1	0	multi-exon	TRUE	canonical	3	84	junction_5	18.5279235376575	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGGGAAGTTTTGTGT	8460	False	NA	16	True	AATAAA	-21	NA	136023654	136061726	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_136023821_136025143_136025307_136038867_136039211_136040864_136041502_136050608_136050713_136057352_136057427_136057917_136058077_136059333_136059496_136060039_136060130_136061113
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137198	chr5	+	584	4	FSM	ENSMUSG00000039771.14	ENSMUST00000041366.14	646	4	62	0	-9	0	multi-exon	FALSE	canonical	3	1103	junction_2	77.5471182930453	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCAGTGTGTGGACTG	9274	False	NA	30	True	AATAAA	-19	NA	136145546	136151801	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_136145660_136148848_136148939_136150942_136151118_136151595
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137209	chr5	-	2181	15	FSM	ENSMUSG00000029703.11	ENSMUST00000006301.11	2473	15	-2	294	-2	1	multi-exon	FALSE	canonical	3	342	junction_8	23.380722043284	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGTGGGAAATGAGTGT	6682	False	NA	-10	True	ATTAAA	-20	NA	136164930	136151919	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_136152170_136152256_136152367_136152453_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965_136161081_136161159_136161283_136161828_136161934_136162158_136162300_136162787_136162905_136163352_136163588_136164725
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137230	chr5	-	928	6	FSM	ENSMUSG00000039737.12	ENSMUST00000151786.8	3893	6	9	2956	9	1	multi-exon	FALSE	canonical	3	446	junction_2	42.6164287569946	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTGTCCACACGTGCGA	NA	False	NA	-12	True	AGTAAA	-17	NA	136227808	136209936	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_136210351_136218405_136218474_136220753_136220840_136223150_136223252_136226633_136226713_136227628
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137238	chr5	-	3093	23	FSM	ENSMUSG00000029705.18	ENSMUST00000176745.8	2831	23	-262	0	-36	0	multi-exon	FALSE	canonical	3	74	junction_13	14.4244970693081	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGTCTTTTATTCTGTG	NA	False	NA	-1	True	AATAAA	-18	NA	136596380	136276988	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355787_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137239	chr5	-	3100	23	FSM	ENSMUSG00000029705.18	ENSMUST00000176216.9	2821	23	-279	0	-37	0	multi-exon	FALSE	canonical	3	30	junction_13	19.9470373118581	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGTCTTTTATTCTGTG	NA	False	NA	-1	True	AATAAA	-18	NA	136596381	136276988	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355793_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137257	chr5	+	4377	1	Intergenic	novelGene_4245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGATGTATGCCTTCTT	NA	False	NA	NA	False	CATAAA	-37	NA	136586546	136590923	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_136586500_136590900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137262	chr5	-	201	1	Intergenic	novelGene_4246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCCAGACAATGGTGGCA	NA	False	NA	NA	False	NA	NA	NA	136636832	136636631	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_136636600_136636800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137265	chr5	+	184	1	Intergenic	novelGene_4247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATGAAGGCAACTGACAT	5556	False	NA	NA	False	NA	NA	NA	136706562	136706746	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_136706600_136706700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137278	chr5	+	192	1	Intergenic	novelGene_4248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATCTGACTCCCTCTTCT	NA	False	NA	NA	False	NA	NA	NA	136787342	136787534	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_136787300_136787500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137294	chr5	+	3778	4	FSM	ENSMUSG00000097908.8	ENSMUST00000181045.8	3967	4	196	-7	-10	1	multi-exon	FALSE	canonical	3	48	junction_3	24.0878023535196	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCGCTTTTTTGTTTTGT	NA	False	NA	31	True	AATAAA	-20	NA	136948195	136965967	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_136948286_136951160_136951282_136954557_136954750_136962592
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137309	chr5	+	947	5	FSM	ENSMUSG00000019054.14	ENSMUST00000111094.8	948	5	3	-2	3	0	multi-exon	FALSE	canonical	3	123	junction_1	181.92443486239	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGTGTGAGCGAGCA	4054	False	NA	20	True	AATAAA	-21	NA	136982131	136995088	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_136982445_136991852_136991986_136993946_136994024_136994418_136994525_136994770
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137317	chr5	+	192	1	Intergenic	novelGene_4249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGATCCTGGGGACCGTG	1041	False	NA	NA	False	NA	NA	NA	136988703	136988895	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_136988700_136988900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137322	chr5	+	775	5	FSM	ENSMUSG00000019054.14	ENSMUST00000019198.7	786	5	12	-1	12	1	multi-exon	FALSE	canonical	3	370	junction_1	76.6823806359714	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGTGTGAGCGAGCAT	3280	False	NA	21	True	AATAAA	-22	NA	136990942	136995089	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_136991083_136991852_136991986_136993946_136994024_136994418_136994525_136994770
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137332	chr5	-	675	5	FSM	ENSMUSG00000059518.15	ENSMUST00000156963.8	1208	5	503	30	-10	0	multi-exon	FALSE	canonical	0	0	junction_4	134.024251536802	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGCTCATTCTGGG	NA	False	NA	2	True	AATAAA	-18	NA	137016372	137011047	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_137011272_137011371_137011542_137011721_137011802_137013732_137013904_137016342
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137356	chr5	-	1336	5	FSM	ENSMUSG00000004849.15	ENSMUST00000111080.8	1353	5	17	0	17	0	multi-exon	FALSE	canonical	3	639	junction_4	57.0586321252096	243	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCCTTGGCTTTGTTGG	NA	False	NA	1	True	AATAAA	-25	NA	137074972	137063846	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_137064646_137066271_137066410_137070622_137070732_137071917_137072097_137074861
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137369	chr5	+	237	1	Antisense	novelGene_ENSMUSG00000106190.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTCGCTGGTATGAAGCAG	NA	False	NA	NA	False	NA	NA	NA	137221667	137221904	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr5_+_137221700_137221900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137374	chr5	+	225	1	Intergenic	novelGene_4250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	767	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGATCCCTGGCATCCAC	NA	False	NA	NA	False	NA	NA	NA	137280372	137280597	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_137280400_137280600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137386	chr5	-	2968	20	FSM	ENSMUSG00000037364.13	ENSMUST00000197466.5	2972	20	10	-6	10	2	multi-exon	FALSE	canonical	3	165	junction_3	165.9658376889	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGCTGTATGTCCCTT	8275	False	NA	-6	True	AGTAAA	-24	NA	137305918	137293970	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_137294169_137294248_137294355_137294479_137294570_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137405	chr5	-	1752	9	FSM	ENSMUSG00000023348.12	ENSMUST00000024119.11	2168	9	172	244	-25	-244	multi-exon	FALSE	canonical	3	95	junction_6	14.9248115565993	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCAAGTCTGTTCTTTAT	1699	False	NA	-1	True	TTTAAA	-5	NA	137312494	137308159	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_137308437_137308546_137308668_137308914_137309094_137310135_137310306_137310401_137310496_137310967_137311352_137311612_137311739_137311842_137311971_137312221
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137410	chr5	-	3301	14	FSM	ENSMUSG00000037344.15	ENSMUST00000039991.14	3330	14	29	0	29	0	multi-exon	FALSE	canonical	3	21	junction_3	4.75307437100782	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGGTGGAGCACTGCT	6530	False	NA	0	True	AATAAA	-15	NA	137331830	137312819	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_137314100_137319655_137319803_137320657_137320833_137320977_137321171_137321308_137321434_137323584_137323668_137323778_137323937_137325632_137325745_137325858_137325967_137326698_137327008_137329204_137329337_137330387_137330523_137330717_137330941_137331709
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137419	chr5	+	198	1	Intergenic	novelGene_4251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGCGTAGATATAAGTTC	NA	False	NA	NA	False	NA	NA	NA	137322493	137322691	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_137322500_137322700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137423	chr5	+	180	1	Intergenic	novelGene_4252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACTTATGTAATATAATAA	NA	False	NA	NA	False	NA	NA	NA	137325003	137325183	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_137325000_137325200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137429	chr5	+	148	1	Intergenic	novelGene_4253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTATCTGTGACCCCAA	NA	False	NA	NA	False	NA	NA	NA	137332410	137332558	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_137332400_137332600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137441	chr5	+	4333	17	FSM	ENSMUSG00000029710.16	ENSMUST00000061244.15	4340	17	0	7	0	1	multi-exon	FALSE	canonical	3	265	junction_1	33.7925657504724	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAGAGGGTGACTGGGAG	NA	False	NA	20	True	AATAAA	-23	NA	137348370	137372783	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360651_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137458	chr5	-	1656	10	FSM	ENSMUSG00000029713.16	ENSMUST00000031726.15	1860	10	204	0	-5	0	multi-exon	FALSE	canonical	3	634	junction_9	47.0030206541801	416	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGTCTCCTTGCTTACTG	1736	False	NA	-5	True	CATAAA	-22	NA	137531568	137526388	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_137526872_137526952_137527170_137527265_137527468_137527704_137527772_137527864_137528028_137528107_137528172_137528445_137528553_137528659_137528699_137528956_137529103_137531400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137467	chr5	+	198	1	Intergenic	novelGene_4254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGACTGTGGAAGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	137541825	137542023	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_137541800_137542000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137482	chr5	+	208	1	Intergenic	novelGene_4255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCACTGAGAAGCAGAGGC	NA	False	NA	NA	False	AAAAAG	-6	NA	137588571	137588779	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_137588600_137588800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137485	chr5	+	166	1	Intergenic	novelGene_4256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	137596610	137596776	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_137596600_137596800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137494	chr5	-	1578	9	FSM	ENSMUSG00000029718.15	ENSMUST00000031731.14	1626	9	50	-2	-29	2	multi-exon	FALSE	canonical	3	231	junction_8	116.165560731225	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGTCTGAGGTTCTGTGT	4073	False	NA	0	True	AATAAA	-23	NA	137609699	137603362	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137605807_137606216_137606342_137607152_137607412_137608658_137608768_137609498
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137521	chr5	+	3071	18	FSM	ENSMUSG00000093445.8	ENSMUST00000031734.16	3078	18	13	-6	-9	1	multi-exon	FALSE	canonical	3	234	junction_8	20.6479805391719	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGCCTGCCTGTCCA	2197	False	NA	31	True	AATAAA	-33	NA	137627395	137639362	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137534	chr5	-	2932	13	FSM	ENSMUSG00000029722.16	ENSMUST00000100544.11	2858	13	-52	-22	-6	0	multi-exon	FALSE	canonical	3	27	junction_7	43.0686628794327	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGAGTGTCTTGTTTTG	1758	False	NA	NA	False	NA	NA	NA	137682994	137648724	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137658423_137658457_137659625_137659755_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137544	chr5	-	2898	12	FSM	ENSMUSG00000029722.16	ENSMUST00000031736.16	2893	12	-5	0	-5	0	multi-exon	FALSE	canonical	3	93	junction_6	17.5678142969908	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGAGTGTCTTGTTTTG	1759	False	NA	NA	False	NA	NA	NA	137682993	137648724	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137659625_137659755_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137554	chr5	+	187	1	Intergenic	novelGene_4257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATATACCCTTTCCTCT	NA	False	NA	NA	False	NA	NA	NA	137677393	137677580	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_137677400_137677600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137561	chr5	-	3513	7	NIC	ENSMUSG00000045348.17	novel	3912	7	NA	NA	-78	31	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	6.97017455544216	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTCTTCTTATATCCC	8545	False	NA	-1	True	ATTAAA	-16	NA	137739442	137729143	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_137730196_137731312_137731423_137731977_137732185_137733101_137734617_137736070_137736418_137737912_137738065_137739312
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137573	chr5	+	2364	5	FSM	ENSMUSG00000029723.17	ENSMUST00000100539.10	3983	5	-40	1659	-3	201	multi-exon	FALSE	canonical	3	319	junction_1	32.7595405950694	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGAGGTTGGTGTGCTGT	NA	False	NA	13	True	ATTAAA	-24	NA	137744217	137758011	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_137744677_137745109_137746122_137749469_137749631_137756945_137756995_137757328
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137577	chr5	+	214	1	Intergenic	novelGene_4258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGCTGGTGAGATGGCTC	482	False	NA	NA	False	NA	NA	NA	137748206	137748420	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_137748200_137748400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137582	chr5	-	191	1	Intergenic	novelGene_4259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCCCAGTACAGGGGAATA	NA	False	NA	1	True	NA	NA	NA	137762044	137761853	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_137761900_137762000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137591	chr5	-	226	1	Intergenic	novelGene_4260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTGTAGTTGTGCACACC	NA	False	NA	NA	False	AAGAAA	-24	NA	137769825	137769599	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_137769600_137769800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137601	chr5	+	946	4	FSM	ENSMUSG00000029725.11	ENSMUST00000031739.6	956	4	10	0	10	0	multi-exon	FALSE	canonical	3	301	junction_1	53.8970211504206	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCGAACTGTTCTTGGGA	NA	False	NA	5	True	AATAAA	-18	NA	137777175	137778372	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_137777484_137777563_137777808_137777887_137778025_137778115
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137607	chr5	+	1035	3	ISM	ENSMUSG00000029725.11	ENSMUST00000031739.6	956	4	12	0	12	0	intron_retention	FALSE	canonical	3	301	junction_1	64	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCGAACTGTTCTTGGGA	NA	False	NA	5	True	AATAAA	-18	NA	137777177	137778372	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr5_+_137777484_137777563_137777808_137777887
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137627	chr5	+	230	1	Antisense	novelGene_ENSMUSG00000046245.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGGGGGGGTCCTTAGA	NA	False	NA	NA	False	NA	NA	NA	137821250	137821480	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr5_+_137821200_137821500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137632	chr5	+	232	1	Intergenic	novelGene_4261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATAACTGCCAGTTGTG	NA	False	NA	NA	False	NA	NA	NA	137878754	137878986	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_137878800_137879000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137638	chr5	-	192	1	Intergenic	novelGene_4262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAATTTTTACATTTT	NA	False	NA	NA	False	NA	NA	NA	138090055	138089863	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_138089900_138090100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137676	chr5	+	180	1	Antisense	novelGene_ENSMUSG00000037007.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAGAAAAATGT	NA	False	NA	NA	False	NA	NA	NA	138140686	138140866	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr5_+_138140700_138140900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137682	chr5	-	233	1	Intergenic	novelGene_4263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTATTTTTTTGTTTG	1013	False	NA	NA	False	AAAACA	-33	NA	138154704	138154471	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_138154500_138154700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137692	chr5	+	1141	10	FSM	ENSMUSG00000019494.15	ENSMUST00000019638.15	1787	10	-7	653	-7	15	multi-exon	FALSE	canonical	3	3954	junction_1	284.410501446999	381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTTTGTCCTCTCAGGC	NA	False	NA	26	True	AATAAA	-27	NA	138159325	138162255	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_138159445_138159636_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137713	chr5	-	2433	15	FSM	ENSMUSG00000029730.17	ENSMUST00000000505.16	2962	15	529	0	-75	0	multi-exon	FALSE	canonical	3	1644	junction_12	192.903605514278	595	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTAGAGTTTTTAGTATG	2245	False	NA	-8	True	AATAAA	-32	NA	138170155	138162844	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137748	chr5	-	2311	15	FSM	ENSMUSG00000036980.14	ENSMUST00000048698.14	2304	15	-6	-1	-6	1	multi-exon	FALSE	canonical	3	362	junction_14	100.146932869985	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCTCCCGCATCACAT	1946	False	NA	-3	True	AATAAA	-19	NA	138185494	138176877	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185431
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137751	chr5	-	2411	15	NNC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_14	167.30713843536	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1952	False	NA	-4	True	AATAAA	-18	NA	138185488	138176878	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185324
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137752	chr5	-	2502	15	NIC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_14	176.391146985028	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1962	False	NA	-4	True	AATAAA	-18	NA	138185478	138176878	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185223
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137764	chr5	-	2390	15	NIC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	170	junction_14	144.727259325383	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1952	False	NA	-4	True	AATAAA	-18	NA	138185488	138176878	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185345
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137809	chr5	+	4236	34	FSM	ENSMUSG00000036928.15	ENSMUST00000048028.15	4211	34	-25	0	-8	0	multi-exon	TRUE	canonical	2	72	junction_1	21.1857845161499	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGACTTGAGATTGTCA	NA	False	NA	20	True	AATAAA	-20	NA	138278762	138310655	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137829	chr5	+	3265	5	FSM	ENSMUSG00000036898.17	ENSMUST00000085856.12	5312	5	16	2031	5	-2031	multi-exon	FALSE	canonical	3	42	junction_4	9.52299847737046	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGAATGACGGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	138439745	138456925	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_138439892_138443013_138443141_138445776_138445870_138453241_138453352_138454136
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137851	chr5	-	2666	6	FSM	ENSMUSG00000025856.16	ENSMUST00000076095.14	2060	6	-598	-8	366	8	multi-exon	FALSE	canonical	3	325	junction_5	43.6055042397173	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATCCCGTGGTTCTGTTT	NA	False	NA	-11	True	ACTAAA	-40	NA	138981390	138961760	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137888	chr5	+	3941	22	FSM	ENSMUSG00000036817.15	ENSMUST00000078690.13	2608	22	-43	-1290	0	-1	multi-exon	FALSE	canonical	3	224	junction_6	196.102233969428	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	NA	False	NA	32	True	AATAAA	-18	NA	139186391	139235594	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137890	chr5	+	4133	23	FSM	ENSMUSG00000036817.15	ENSMUST00000058716.14	4134	23	0	1	0	-1	multi-exon	FALSE	canonical	3	426	junction_7	179.419817953258	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	NA	False	NA	32	True	AATAAA	-18	NA	139186391	139235594	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137925	chr5	+	3996	22	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	224	junction_8	233.254943100303	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	NA	False	NA	32	True	AATAAA	-18	NA	139186414	139235594	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137945	chr5	+	3908	22	NIC	ENSMUSG00000036817.15	novel	2608	22	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	224	junction_6	222.683764466375	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	NA	False	NA	32	True	AATAAA	-18	NA	139186421	139235594	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137955	chr5	+	4099	23	NIC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	247	junction_16	206.64914170786	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTGTCTTATCTCTG	NA	False	NA	31	True	AATAAA	-17	NA	139186421	139235593	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137964	chr5	+	3799	21	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	224	junction_6	225.20792614826	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	NA	False	NA	32	True	AATAAA	-18	NA	139186422	139235594	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137982	chr5	+	3748	21	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	224	junction_6	249.524768309681	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCATGTGCGATTTCAAGT	NA	False	NA	-15	True	AATAAA	-18	NA	139186423	139235547	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000137997	chr5	+	3878	21	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_7	227.455841868262	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCGATTTCAAGTGAT	NA	False	NA	-12	True	AATAAA	-21	NA	139186425	139235550	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138002	chr5	+	2116	9	FSM	ENSMUSG00000025858.13	ENSMUST00000026976.12	2107	9	-9	0	-9	0	multi-exon	FALSE	canonical	3	1098	junction_8	59.685503893324	259	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCAGTAGTCCTTTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	139238069	139255806	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139252900_139252981_139253058_139253157_139253231_139254735
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138033	chr5	-	2661	11	FSM	ENSMUSG00000056413.17	ENSMUST00000110865.2	2557	11	-104	0	-104	0	multi-exon	FALSE	canonical	3	178	junction_10	23.6296424010183	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTGTGTTTATGGCT	4854	False	NA	-5	True	AATAAA	-20	NA	139311481	139257630	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_139258832_139259089_139259319_139259489_139259562_139260201_139260265_139260483_139260568_139265263_139265411_139266459_139266573_139278890_139278974_139288058_139288151_139293496_139293628_139311035
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138048	chr5	+	192	1	Intergenic	novelGene_4264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTGAACTATATCTC	NA	False	NA	NA	False	NA	NA	NA	139334080	139334272	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_139334100_139334300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138058	chr5	-	1472	5	FSM	ENSMUSG00000053553.12	ENSMUST00000066052.12	1429	5	-43	0	-18	0	multi-exon	FALSE	canonical	3	675	junction_4	25.951878544722	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGACTTTTTGCCTGTC	NA	False	NA	-6	True	NA	NA	NA	139446300	139345493	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_139346486_139347061_139347144_139349727_139349919_139441171_139441302_139446223
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138082	chr5	+	169	2	Intergenic	novelGene_4265	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	103	junction_1	0	1054	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAATAAGTAAATAA	NA	False	NA	NA	False	NA	NA	NA	139470808	139497765	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_139470860_139497647
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138092	chr5	+	191	1	Intergenic	novelGene_4266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAGAAGGGGGGGGATC	NA	False	NA	NA	False	NA	NA	NA	139649270	139649461	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_139649300_139649500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138117	chr5	+	192	1	Intergenic	novelGene_4267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGCACCATCACTGCCC	NA	False	NA	NA	False	NA	NA	NA	139764821	139765013	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_139764800_139765000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138128	chr5	+	190	1	Intergenic	novelGene_4268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTACTTATTTATTATAT	NA	False	NA	NA	False	NA	NA	NA	139774036	139774226	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_139774000_139774200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138142	chr5	-	861	3	FSM	ENSMUSG00000029551.14	ENSMUST00000031531.14	883	3	1	21	1	0	multi-exon	FALSE	canonical	3	166	junction_2	27	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTGGCCTTCTCAGTG	7314	False	NA	-33	True	AATAAA	-10	NA	139812639	139809367	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_139809829_139811882_139812120_139812476
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138148	chr5	+	204	1	Intergenic	novelGene_4269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAAGGGGCTGGAGTGAT	NA	False	NA	NA	False	NA	NA	NA	139936553	139936757	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_139936600_139936800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138159	chr5	-	2660	18	FSM	ENSMUSG00000029554.16	ENSMUST00000031534.9	2640	18	-20	0	-20	0	multi-exon	FALSE	canonical	3	167	junction_17	17.902078903461	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCCAAGGCTCCAAGC	NA	False	NA	1	True	AATAAA	-27	NA	140307327	139994443	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138181	chr5	+	216	1	Intergenic	novelGene_4270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAACACTATCAGCCAC	NA	False	NA	NA	False	NA	NA	NA	140159248	140159464	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_140159200_140159500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138186	chr5	-	1435	3	FSM	ENSMUSG00000029557.8	ENSMUST00000031536.8	1443	3	8	0	8	0	multi-exon	FALSE	canonical	3	45	junction_2	12	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTACTTGTCTGTTT	3909	False	NA	-5	True	AAAACA	-37	NA	140317645	140313428	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_140314536_140316734_140317025_140317607
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138201	chr5	+	909	4	FSM	ENSMUSG00000036639.13	ENSMUST00000110826.8	606	4	26	-329	-3	0	multi-exon	FALSE	canonical	3	152	junction_1	28.5696031162882	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGTGTGACTACAGCG	NA	False	NA	10	True	NA	NA	NA	140318175	140323892	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_140318229_140320209_140320375_140321067_140321214_140323347
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138203	chr5	+	193	1	Intergenic	novelGene_4271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCCAGAGGTGGTGTATA	NA	False	NA	NA	False	NA	NA	NA	140319118	140319311	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_140319100_140319300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138221	chr5	+	193	1	Intergenic	novelGene_4272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCCAGACTGTCGATCC	NA	False	NA	NA	False	NA	NA	NA	140380789	140380982	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_140380800_140381000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138230	chr5	+	183	1	Intergenic	novelGene_4273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGAAAGCCGGGTGTGG	NA	False	NA	NA	False	NA	NA	NA	140386800	140386983	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_140386800_140387000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138234	chr5	+	187	1	Intergenic	novelGene_4274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGCCGAGCGTGGTGGC	3057	False	NA	NA	False	NA	NA	NA	140391311	140391498	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_140391300_140391500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138242	chr5	+	3014	19	FSM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	-66	-3	-66	3	multi-exon	TRUE	canonical	3	2428	junction_3	310.145868707844	830	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCCTGATCTCTTTGT	NA	False	NA	18	True	AATAAA	-19	NA	140405016	140429118	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138260	chr5	+	196	1	Intergenic	novelGene_4275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGAAAGAGCCGGG	NA	False	NA	NA	False	NA	NA	NA	140451423	140451619	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_140451400_140451600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138270	chr5	+	1789	2	FSM	ENSMUSG00000036599.11	ENSMUST00000043050.9	2331	2	56	486	31	-486	multi-exon	FALSE	canonical	3	68	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCATTCCTGTGGTTC	NA	False	NA	19	True	AGTAAA	-15	NA	140491360	140510993	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_140491452_140509295
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138286	chr5	+	3333	14	FSM	ENSMUSG00000000148.18	ENSMUST00000041588.13	3333	14	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	10.6471097836719	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTCTTCTCTTTGAGG	NA	False	NA	NA	False	NA	NA	NA	140690765	140705134	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_140690831_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138308	chr5	-	3446	4	FSM	ENSMUSG00000000149.11	ENSMUST00000000153.9	3416	4	-30	0	-30	0	multi-exon	FALSE	canonical	3	201	junction_1	26.9938264547038	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCTTCATGCCTAGCAT	NA	False	NA	NA	False	AATAAA	-27	NA	140816216	140744162	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_140746874_140748344_140748396_140771151_140771368_140815748
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138315	chr5	+	174	1	Intergenic	novelGene_4276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAGTGGCAAGAT	NA	False	NA	NA	False	NA	NA	NA	142237626	142237800	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_142237600_142237800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138334	chr5	-	3697	15	FSM	ENSMUSG00000029576.18	ENSMUST00000063635.15	3700	15	3	0	3	0	multi-exon	FALSE	canonical	3	29	junction_12	8.41069532906569	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGGATGTAGGATCTGCA	NA	False	NA	-5	True	AATAAA	-21	NA	142536850	142470593	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_142471004_142471167_142471308_142471609_142471747_142472509_142472862_142473201_142473393_142474157_142474309_142479982_142480156_142480490_142480729_142481080_142481194_142483592_142483754_142489667_142489706_142492213_142492844_142493824_142494073_142529159_142529759_142536734
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138341	chr5	-	179	1	Intergenic	novelGene_4277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGGTCTATGGGGAG	NA	False	NA	NA	False	NA	NA	NA	142538872	142538693	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_142538700_142538900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138348	chr5	+	210	1	Intergenic	novelGene_4278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGAATTCTAGGAAGCCT	NA	False	NA	NA	False	NA	NA	NA	142579963	142580173	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_142580000_142580200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138366	chr5	+	2797	11	FSM	ENSMUSG00000050822.12	ENSMUST00000058418.8	2789	11	-8	0	-8	0	multi-exon	TRUE	canonical	3	36	junction_7	3.13847096529504	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCGCTGTCCTGAGGAAGT	NA	False	NA	NA	False	ATTAAA	-17	NA	142687847	142708245	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_142688047_142691110_142691291_142697717_142697850_142698641_142698756_142699765_142699895_142700800_142700876_142703346_142703592_142704211_142704354_142704465_142704654_142705711_142705953_142707093
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138373	chr5	-	6488	16	NIC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_14	28.7986110776197	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCCTCGTTTCTCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	142803415	142740543	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_142741415_142745465_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759804_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888_142774515_142775818_142775945_142800769_142801201_142803026
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138396	chr5	-	1955	6	FSM	ENSMUSG00000029580.15	ENSMUST00000100497.11	1920	6	-34	-1	-34	1	multi-exon	FALSE	canonical	3	4052	junction_3	78.6180640819907	2937	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGCTCTGTGGCTTTG	8855	False	NA	0	True	AATAAA	-28	NA	142892543	142888868	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_142889697_142889821_142890004_142890098_142890538_142890991_142891232_142891318_142891448_142892406
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138421	chr5	+	190	1	Intergenic	novelGene_4279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTAATAAGAAAAGG	NA	False	NA	NA	False	NA	NA	NA	142920016	142920206	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_142920000_142920200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138429	chr5	-	182	1	Intergenic	novelGene_4280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGAAAAATAAAAAAAGGGG	5374	False	NA	NA	False	NA	NA	NA	142923733	142923551	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_142923600_142923700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138437	chr5	+	2681	5	FSM	ENSMUSG00000029581.15	ENSMUST00000031565.15	2675	5	-3	-3	-3	3	multi-exon	FALSE	canonical	3	2634	junction_2	132.012310032057	1571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTGTGTCTCAGGGGAAG	NA	False	NA	21	True	AATAAA	-21	NA	142946094	142958943	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_142947036_142955659_142955817_142955921_142956044_142956272_142956441_142957650
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138448	chr5	+	5024	1	NIC	ENSMUSG00000029581.15	novel	2675	5	NA	NA	13	-5173	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAACAACCTGAGGCTTT	NA	False	NA	NA	False	AAAACA	-6	NA	142946110	142951134	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_+_142946100_142951100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138454	chr5	+	203	1	Intergenic	novelGene_4281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTATTATTAAATTAAT	308	False	NA	NA	False	NA	NA	NA	142961502	142961705	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_142961500_142961700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138460	chr5	+	193	1	Intergenic	novelGene_4282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATGTGGGTGTTGGGA	1803	False	NA	NA	False	NA	NA	NA	142965486	142965679	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_142965500_142965700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138493	chr5	-	189	1	Intergenic	novelGene_4283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTTTCATAAGACTGT	NA	False	NA	NA	False	NA	NA	NA	143042828	143042639	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_143042600_143042800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138501	chr5	-	178	1	Intergenic	novelGene_4284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATTTAAAAAAAATGAAGG	3306	False	NA	NA	False	NA	NA	NA	143109707	143109529	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_143109500_143109700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138536	chr5	-	1346	8	FSM	ENSMUSG00000001844.11	ENSMUST00000001900.9	1364	8	18	0	-9	0	multi-exon	TRUE	canonical	3	167	junction_7	40.248209492435	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTTTTCTCATCATTG	5287	False	NA	-13	True	AATACA	-26	NA	143314993	143302243	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145_143314326_143314920
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138554	chr5	+	1876	5	FSM	ENSMUSG00000079111.4	ENSMUST00000110731.4	1829	5	-44	-3	-44	3	multi-exon	FALSE	canonical	3	606	junction_2	10.3531396204243	270	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGGTCTTTTCTATGAA	NA	False	NA	NA	False	AATAAA	-18	NA	143389548	143407659	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_143389808_143398245_143398347_143403804_143403964_143405194_143405448_143406555
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138566	chr5	-	187	1	Intergenic	novelGene_4285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGTTATTTGGAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	143432340	143432153	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_143432200_143432300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138590	chr5	+	2198	2	FSM	ENSMUSG00000118332.2	ENSMUST00000067145.12	2198	2	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	0	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCGTATGTTCTCCTT	NA	False	NA	26	True	AATAAA	-39	NA	143534460	143550280	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_143534890_143548511
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138608	chr5	+	3732	13	FSM	ENSMUSG00000018001.19	ENSMUST00000116456.10	3738	13	6	0	6	0	multi-exon	FALSE	canonical	3	61	junction_12	7.06468132488807	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCTAAGACTCAATTCTT	NA	False	NA	5	True	AATAAA	-22	NA	143608207	143696005	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_143608429_143670150_143670234_143672227_143672293_143672732_143672800_143678302_143678422_143683470_143683552_143687073_143687187_143687351_143687501_143688568_143688681_143692838_143692916_143692993_143693066_143693149_143693305_143693587
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138617	chr5	-	5364	18	FSM	ENSMUSG00000051306.8	ENSMUST00000053287.6	5151	18	-213	0	-213	0	multi-exon	FALSE	canonical	3	67	junction_4	13.3323240679149	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCGTCTCAGTTTTACTC	NA	False	NA	NA	False	ATTAAA	-1	NA	143718248	143696079	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_143697098_143697704_143697744_143699290_143699593_143700356_143701836_143702331_143702427_143702528_143703237_143703678_143703833_143705248_143705350_143705481_143705623_143706031_143706144_143706902_143706986_143707387_143707459_143708041_143708110_143708863_143708967_143709649_143709761_143712243_143712445_143713534_143713782_143717917
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138641	chr5	-	1065	4	FSM	ENSMUSG00000029610.14	ENSMUST00000100483.3	1073	4	8	0	0	0	multi-exon	FALSE	canonical	3	207	junction_3	226.993881464286	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTATTTTATTTTAA	NA	False	NA	-18	True	AATAAA	-16	NA	143846657	143839521	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_143840009_143841382_143841615_143843366_143843574_143846518
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138644	chr5	-	1185	4	FSM	ENSMUSG00000029610.14	ENSMUST00000031613.11	1185	4	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_3	88.5023540176569	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTATTTTATTTTAA	NA	False	NA	-18	True	AATAAA	-16	NA	143846657	143839521	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_143840009_143841382_143841615_143843366_143843574_143846398
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138654	chr5	+	2927	15	FSM	ENSMUSG00000079109.12	ENSMUST00000148011.8	5482	15	33	2522	-2	4	multi-exon	FALSE	canonical	3	72	junction_4	18.4303708977484	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTCTGCAGTTACTGTT	NA	False	NA	NA	False	AAAAAG	-21	NA	143846814	143868264	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_143846898_143848738_143848879_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138668	chr5	-	193	1	Intergenic	novelGene_4286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTTCCCAAACTTACCA	NA	False	NA	NA	False	NA	NA	NA	143849089	143848896	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_143848900_143849100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138671	chr5	-	1831	15	FSM	ENSMUSG00000029617.11	ENSMUST00000031621.11	1769	15	-62	0	-38	0	multi-exon	FALSE	canonical	3	726	junction_9	71.895615943093	371	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTTCCTGTTGAGTCCT	NA	False	NA	1	True	AATAAA	-22	NA	143951733	143924726	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_143925068_143927455_143927584_143928289_143928449_143929326_143929445_143930043_143930078_143934980_143935093_143935361_143935424_143938194_143938277_143940860_143941037_143946020_143946105_143947848_143947897_143948269_143948348_143949620_143949715_143949811_143949910_143951516
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138684	chr5	+	178	1	Intergenic	novelGene_4287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAGTATGATACCATT	NA	False	NA	NA	False	NA	NA	NA	143954168	143954346	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_143954200_143954300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138697	chr5	+	8175	14	FSM	ENSMUSG00000038970.8	ENSMUST00000041804.8	8114	14	-64	3	-64	-3	multi-exon	FALSE	canonical	3	41	junction_10	10.2628185108664	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTCTGTTGCTACATTT	NA	False	NA	NA	False	AATAAA	-20	NA	144037189	144125019	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_144037595_144066170_144066296_144070953_144071099_144080343_144080418_144084413_144084533_144085095_144085184_144093678_144093813_144101423_144101509_144103115_144103238_144108554_144108705_144110426_144113296_144119554_144119688_144119999_144120240_144121533
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138711	chr5	-	192	2	Antisense	novelGene_ENSMUSG00000086894.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCAAACTGCTGTCACCA	NA	False	NA	NA	False	NA	NA	NA	144282019	144163588	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr5_-_144163732_144281970
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138717	chr5	+	191	1	Intergenic	novelGene_4288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGCAGAAGCCACTAAGTA	NA	False	NA	NA	False	NA	NA	NA	144169086	144169277	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_144169100_144169300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138727	chr5	-	3205	14	FSM	ENSMUSG00000038859.8	ENSMUST00000055190.8	3247	14	42	0	42	0	multi-exon	FALSE	canonical	2	11	junction_13	4.28979799803037	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGCTGTAAGTGGTACC	NA	False	NA	-1	True	AATAAA	-17	NA	144294880	144201335	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_144202843_144203417_144203456_144212582_144212776_144214454_144214527_144215337_144215549_144217629_144217778_144218799_144218968_144221253_144221407_144222267_144222406_144222884_144222957_144223059_144223122_144255738_144255826_144261366_144261443_144294600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138738	chr5	+	2561	5	FSM	ENSMUSG00000059991.8	ENSMUST00000071782.8	2536	5	-20	-5	-20	5	multi-exon	FALSE	canonical	3	146	junction_1	16.768646337734	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTTGTTCTCTCCCCTC	NA	False	NA	16	True	ATTAAA	-22	NA	144482691	144494293	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_144483294_144484928_144485146_144490209_144490455_144492106_144492287_144492976
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138751	chr5	+	232	1	Intergenic	novelGene_4289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTATTTATTA	NA	False	NA	NA	False	TTTAAA	-12	NA	144660971	144661203	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_144661000_144661200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138756	chr5	-	184	1	Intergenic	novelGene_4290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTAAATCTATCAA	NA	False	NA	NA	False	NA	NA	NA	144661382	144661198	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_144661200_144661400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138795	chr5	+	1627	10	FSM	ENSMUSG00000029621.15	ENSMUST00000031625.15	1632	10	5	0	5	0	multi-exon	TRUE	canonical	3	332	junction_5	31.8084545015595	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTTTCTTTATACTCT	NA	False	NA	22	True	ATTAAA	-23	NA	145020644	145045571	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_145020783_145027962_145028057_145029267_145029373_145032861_145033085_145034025_145034134_145037866_145038080_145041251_145041328_145041507_145041702_145043854_145043946_145045186
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138820	chr5	-	1325	6	FSM	ENSMUSG00000029623.15	ENSMUST00000031627.9	2353	6	143	885	-97	430	multi-exon	FALSE	canonical	3	415	junction_5	28.7708185493566	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTTTGGCAGTTTCT	NA	False	NA	-22	True	ATTAAA	-15	NA	145076905	145066463	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_145067186_145068174_145068327_145069668_145069791_145071874_145071983_145073711_145073804_145076776
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138826	chr5	+	178	1	Antisense	novelGene_ENSMUSG00000029623.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAGTTAAACAGTT	NA	False	NA	NA	False	NA	NA	NA	145070161	145070339	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr5_+_145070200_145070300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138844	chr5	+	912	6	FSM	ENSMUSG00000038722.18	ENSMUST00000160075.2	928	6	19	-3	19	0	multi-exon	FALSE	canonical	3	107	junction_1	298.93035978301	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACATTCTTTCTTTTAAG	NA	False	NA	16	True	AATAAA	-17	NA	145077243	145084884	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_145077374_145078114_145078247_145079257_145079378_145081708_145081832_145083252_145083420_145084644
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138853	chr5	-	3032	9	FSM	ENSMUSG00000029624.11	ENSMUST00000031628.10	3087	9	43	12	43	-12	multi-exon	FALSE	canonical	3	72	junction_5	16.4350045634311	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGTTTTAACTGAGTGC	NA	False	NA	-10	True	AATAAA	-18	NA	145103875	145084335	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_145085316_145088095_145088279_145088927_145089045_145091483_145092189_145095549_145095652_145096284_145096504_145097848_145097990_145101870_145102344_145103763
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138859	chr5	-	220	1	Intergenic	novelGene_4291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGCCTTAGTTACTAT	NA	False	NA	NA	False	NA	NA	NA	145092873	145092653	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_145092700_145092900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138868	chr5	+	1708	8	FSM	ENSMUSG00000029625.17	ENSMUST00000160629.8	1713	8	5	0	5	0	multi-exon	FALSE	canonical	3	267	junction_6	186.36939400129	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTTCATTACTTAA	NA	False	NA	23	True	ATTAAA	-15	NA	145104027	145118851	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115645_145115739_145117945
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138869	chr5	+	1711	8	FSM	ENSMUSG00000029625.17	ENSMUST00000162244.8	1387	8	-36	-288	5	0	multi-exon	FALSE	canonical	3	381	junction_6	148.975001327096	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTTCATTACTTAA	NA	False	NA	23	True	ATTAAA	-15	NA	145104027	145118851	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115642_145115739_145117945
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138881	chr5	+	1771	8	FSM	ENSMUSG00000029625.17	ENSMUST00000160422.8	1756	8	-14	-1	9	0	multi-exon	FALSE	canonical	3	31	junction_6	266.097419631784	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTTCATTACTTAA	NA	False	NA	23	True	ATTAAA	-15	NA	145104042	145118851	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115567_145115739_145117945
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138891	chr5	-	484	4	FSM	ENSMUSG00000038690.16	ENSMUST00000161741.8	955	4	470	1	0	-1	multi-exon	FALSE	canonical	3	4948	junction_3	568.415341101909	496	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGTGTAGTCATTGTT	9969	False	NA	-3	True	AATAAA	-24	NA	145128402	145120508	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_145120678_145121341_145121459_145123935_145124044_145128312
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138908	chr5	+	3817	6	FSM	ENSMUSG00000055991.16	ENSMUST00000085671.10	3794	6	-23	0	-23	0	multi-exon	FALSE	canonical	3	45	junction_2	9.08625335328044	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGACTTGAGGTTTCTCTC	914	False	NA	10	True	ATTAAA	-15	NA	145141348	145158560	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_145142519_145144385_145144519_145148555_145148639_145149314_145149451_145155096_145155694_145156862
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138915	chr5	+	4143	4	FSM	ENSMUSG00000007812.17	ENSMUST00000167316.8	4104	4	-35	-4	-27	4	multi-exon	FALSE	canonical	3	281	junction_2	68.241401574769	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTTTGTTTTGAGCCAA	1264	False	NA	20	True	NA	NA	NA	145168497	145184116	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_145168642_145170250_145170413_145179729_145179835_145180384
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138924	chr5	+	1275	5	FSM	ENSMUSG00000007812.17	ENSMUST00000200039.5	1765	5	16	474	2	0	multi-exon	FALSE	canonical	3	46	junction_3	167.334059593377	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTGTACTTTTTGTAG	1307	False	NA	NA	False	AATACA	-16	NA	145168540	145174658	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_145168642_145170250_145170413_145172115_145172202_145172546_145172674_145173859
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138944	chr5	+	149	1	Intergenic	novelGene_4292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGAAAAAAATGTACATTAT	8478	False	NA	NA	False	NA	NA	NA	146087734	146087883	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_146087700_146087900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138947	chr5	-	3338	5	FSM	ENSMUSG00000029634.16	ENSMUST00000161859.8	3452	5	113	1	-24	-1	multi-exon	FALSE	canonical	3	59	junction_4	27.6348964173923	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTGTGCAAACTTATTT	2294	False	NA	NA	False	ATTAAA	-27	NA	146158252	146146002	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_146148743_146152906_146153003_146154710_146154907_146157211_146157295_146158029
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138966	chr5	+	3064	13	FSM	ENSMUSG00000029635.16	ENSMUST00000031640.15	2973	13	-91	0	-33	0	multi-exon	FALSE	canonical	3	65	junction_3	19.7545704978761	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGTGTCAACTATATT	NA	False	NA	NA	False	AATAAA	-20	NA	146168006	146239684	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_146168631_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146229433_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138977	chr5	-	208	1	Intergenic	novelGene_4293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAACTCCCAACAACCACA	NA	False	NA	NA	False	NA	NA	NA	146269149	146268941	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_146268900_146269100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138980	chr5	+	4940	10	FSM	ENSMUSG00000029636.12	ENSMUST00000016143.9	5196	10	256	0	256	0	multi-exon	TRUE	canonical	3	97	junction_1	19.5037191768236	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTCTGCTTATTTATA	NA	False	NA	15	True	AATAAA	-19	NA	146322050	146410425	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_146322149_146358727_146358816_146372134_146372278_146388680_146388816_146390125_146390280_146392353_146392472_146397774_146397951_146403607_146403875_146405024_146405390_146407029
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000138994	chr5	+	181	1	Intergenic	novelGene_4294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTATGTCCACACATGCTC	NA	False	NA	NA	False	NA	NA	NA	146580946	146581127	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_146580900_146581100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139011	chr5	+	785	6	FSM	ENSMUSG00000041453.13	ENSMUST00000035983.12	1856	6	26	1045	26	1	multi-exon	FALSE	canonical	3	6955	junction_1	2705.44403749181	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAAGTGTTTTCCTTAGA	NA	False	NA	3	True	AATAAA	-17	NA	146769725	146772797	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_146769982_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139026	chr5	+	184	1	Intergenic	novelGene_4295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACAAACTTGGTTTGTAT	NA	False	NA	NA	False	NA	NA	NA	146870893	146871077	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_146870900_146871100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139041	chr5	+	1468	8	FSM	ENSMUSG00000016503.19	ENSMUST00000132102.2	1426	8	-34	-8	14	0	multi-exon	FALSE	canonical	3	430	junction_2	50.1141553997328	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGCTGTTTCCGTCGT	NA	False	NA	23	True	ATTAAA	-23	NA	146885480	146892424	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_146885786_146887342_146887444_146887996_146888094_146888683_146888773_146889536_146889611_146890036_146890118_146890657_146890888_146891933
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139051	chr5	-	1562	4	FSM	ENSMUSG00000016510.12	ENSMUST00000110566.2	1134	4	10	-438	0	-409	multi-exon	FALSE	canonical	3	88	junction_3	16.996731711976	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGTAGTGAATCTGAC	NA	False	NA	-18	True	AATAAA	-17	NA	146900597	146891738	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900532
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139077	chr5	+	952	3	FSM	ENSMUSG00000029642.12	ENSMUST00000110557.5	1137	3	185	0	-17	0	multi-exon	FALSE	canonical	3	400	junction_1	26.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTCCTCTTTTGGGTGT	NA	False	NA	16	True	AATAAA	-17	NA	147014340	147048171	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_147014504_147038038_147038114_147047457
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139084	chr5	+	689	2	FSM	ENSMUSG00000029642.12	ENSMUST00000050970.4	1196	2	507	0	-7	0	multi-exon	FALSE	canonical	3	451	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGAGTGGTTTCTCTTC	NA	False	NA	22	True	NA	NA	NA	147014366	147015896	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_147014504_147015344
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139090	chr5	+	190	1	Intergenic	novelGene_4296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAAGATTAGAACAGAAAT	9360	False	NA	NA	False	NA	NA	NA	147086925	147087115	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_147086900_147087100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139098	chr5	-	182	1	Intergenic	novelGene_4297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCACTGCCACCACACCT	NA	False	NA	NA	False	NA	NA	NA	147270918	147270736	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_147270700_147270900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139105	chr5	+	203	1	Intergenic	novelGene_4298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGCTTAAAGTGACATG	NA	False	NA	NA	False	NA	NA	NA	147334089	147334292	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_147334100_147334300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139126	chr5	+	5657	18	ISM	ENSMUSG00000029647.16	ENSMUST00000031651.15	5048	19	14	6	14	0	intron_retention	FALSE	canonical	3	100	junction_5	15.3065560280373	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTCTGTTGTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	147366984	147485306	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139136	chr5	-	183	1	Intergenic	novelGene_4299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTTTTAAAACGTACAGA	NA	False	NA	NA	False	NA	NA	NA	147700948	147700765	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_147700800_147700900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139146	chr5	+	762	6	FSM	ENSMUSG00000029649.11	ENSMUST00000031654.10	1579	6	143	674	-24	171	multi-exon	FALSE	canonical	3	2983	junction_1	193.876661823954	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTGTGTGGTTGGGTTT	NA	False	NA	34	True	AATAAA	-24	NA	147797413	147812592	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_147797502_147799362_147799461_147805532_147805594_147806221_147806324_147809375_147809470_147812273
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139156	chr5	+	195	1	Intergenic	novelGene_4300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGGAAATCCAGAACTCG	NA	False	NA	NA	False	NA	NA	NA	147845651	147845846	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_147845700_147845800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139159	chr5	+	196	1	Intergenic	novelGene_4301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAATGACGAGATGG	5260	False	NA	NA	False	NA	NA	NA	147878535	147878731	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_147878500_147878700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139162	chr5	+	206	1	Intergenic	novelGene_4302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGTACCAGTCCTTAT	NA	False	NA	NA	False	NA	NA	NA	147919209	147919415	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_147919200_147919400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139166	chr5	-	1263	5	Antisense	novelGene_ENSMUSG00000029651.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_2	4.55521678957215	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGTAGTATACTCTTTC	8604	False	NA	-1	True	NA	NA	NA	147949129	147941084	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr5_-_147941718_147942673_147942827_147943327_147943469_147943860_147944081_147949013
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139194	chr5	+	184	1	Intergenic	novelGene_4303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATAGGTGTTTGGGTAT	6462	False	NA	NA	False	NA	NA	NA	148309668	148309852	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_148309700_148309900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139202	chr5	-	2717	5	FSM	ENSMUSG00000001687.16	ENSMUST00000079324.14	2537	5	-183	3	-56	-3	multi-exon	FALSE	canonical	3	361	junction_2	34.1641259217911	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGCATTTTGTTGATGA	NA	False	NA	-7	True	AATAAA	-18	NA	148489655	148441447	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_148442998_148443255_148443334_148446078_148446166_148448703_148448813_148488762
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139210	chr5	-	2588	6	FSM	ENSMUSG00000001687.16	ENSMUST00000201595.4	2064	6	-35	-489	-35	-5	multi-exon	FALSE	canonical	3	120	junction_5	118.120954957196	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAGTGCATTTTGTTGAT	NA	False	NA	-9	True	AATAAA	-16	NA	148489634	148441449	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_148442998_148443255_148443334_148446078_148446166_148448703_148448813_148488762_148488861_148488966
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139227	chr5	-	178	1	Intergenic	novelGene_4304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGTATGGCCTATG	NA	False	NA	NA	False	NA	NA	NA	148777325	148777147	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_148777100_148777300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139240	chr5	-	2325	5	FSM	ENSMUSG00000066551.13	ENSMUST00000085546.13	2838	5	-7	520	-7	-520	multi-exon	FALSE	canonical	3	5649	junction_4	1171.94720444225	902	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAATGACTTTCACTTAA	6757	False	NA	-2	True	AATAAA	-29	NA	148989857	148984031	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_148985724_148986536_148986712_148987104_148987251_148987397_148987562_148989709
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139253	chr5	+	179	1	Intergenic	novelGene_4305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGGTCTACAAGAAGACAA	1672	False	NA	NA	False	NA	NA	NA	149008629	149008808	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_149008600_149008800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139255	chr5	-	127	1	Intergenic	novelGene_4306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTGTGGCCCAGTGGTT	3669	False	NA	-21	True	NA	NA	NA	149049396	149049269	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_149049300_149049400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139259	chr5	-	225	1	Intergenic	novelGene_4307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAGAAGTTTCAGAATGC	NA	False	NA	NA	False	NA	NA	NA	149078143	149077918	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_149077900_149078100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139268	chr5	-	1714	2	NNC	ENSMUSG00000024437.7	novel	737	2	NA	NA	17	989	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTAGTTCTTTATTTCCA	NA	False	NA	NA	False	AATAAA	-8	NA	149093002	149090928	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_-_149092357_149092716
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139274	chr5	-	1889	2	NNC	ENSMUSG00000024437.7	novel	737	2	NA	NA	17	989	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTAGTTCTTTATTTCCA	NA	False	NA	NA	False	AATAAA	-8	NA	149093002	149090928	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_-_149092532_149092716
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139296	chr5	+	2981	9	FSM	ENSMUSG00000041264.17	ENSMUST00000117878.8	2931	9	-49	-1	0	0	multi-exon	FALSE	canonical	3	110	junction_8	110.241141934398	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121476	149152244	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_149121617_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139301	chr5	+	3827	10	FSM	ENSMUSG00000041264.17	ENSMUST00000122160.8	3827	10	4	-4	0	0	multi-exon	FALSE	canonical	3	36	junction_1	142.108287696738	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121476	149152244	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_149121617_149122294_149122472_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139302	chr5	+	3150	10	FSM	ENSMUSG00000041264.17	ENSMUST00000100410.10	3148	10	1	-3	0	0	multi-exon	FALSE	canonical	3	110	junction_9	101.142119787266	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121476	149152244	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_149121617_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139316	chr5	+	3649	9	FSM	ENSMUSG00000041264.17	ENSMUST00000050472.16	3757	9	108	0	1	0	multi-exon	FALSE	canonical	3	191	junction_1	75.8798392196504	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121477	149152244	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_149121617_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139337	chr5	-	3826	18	FSM	ENSMUSG00000029657.16	ENSMUST00000202361.4	3802	18	-18	-6	-5	6	multi-exon	FALSE	canonical	3	1194	junction_12	107.653101726883	1421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTTGTTGTCCTTCAA	NA	False	NA	17	True	TTTAAA	-19	NA	149559821	149540002	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139347	chr5	-	3369	17	FSM	ENSMUSG00000029657.16	ENSMUST00000074846.14	3240	17	-127	-2	2	2	multi-exon	FALSE	canonical	3	9	junction_6	344.38590613402	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGGCTTTGTCTCCGA	NA	False	NA	-4	True	AATAAA	-26	NA	149559801	149540307	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139356	chr5	-	3440	19	NNC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	-12	2	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_18	319.198151430335	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGGCTTTGTCTCCGA	NA	False	NA	-4	True	AATAAA	-26	NA	149559828	149540307	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434_149559697_149559784
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139368	chr5	-	3619	19	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	3	2	intron_retention	FALSE	canonical	3	48	junction_17	419.554775776112	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGGCTTTGTCTCCGA	NA	False	NA	-4	True	AATAAA	-26	NA	149559800	149540307	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149555756_149555876_149557294_149557353_149559434
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139369	chr5	-	3361	19	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	-5	2	combination_of_known_junctions	FALSE	canonical	3	169	junction_18	290.373753405274	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGGCTTTGTCTCCGA	NA	False	NA	-4	True	AATAAA	-26	NA	149559821	149540307	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434_149559625_149559784
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139385	chr5	+	4570	15	FSM	ENSMUSG00000051950.11	ENSMUST00000100404.6	4570	15	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_13	51.6933659344471	244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTGGCTTCTGTTGTCT	NA	False	NA	14	True	AATAAA	-22	NA	149601694	149686064	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139393	chr5	+	181	1	Intergenic	novelGene_4308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAGAGTTTTTGAAAAT	NA	False	NA	NA	False	NA	NA	NA	149924166	149924347	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_149924200_149924300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139413	chr5	+	2273	3	ISM	ENSMUSG00000041147.11	ENSMUST00000202975.4	2534	8	-2	5606	0	-1032	intron_retention	FALSE	canonical	3	58	junction_1	9.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCTTGCATGTGTTTA	370	False	NA	NA	False	AATAAA	-2	NA	150446094	150454835	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr5_+_150446362_150446639_150446745_150452934
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139422	chr5	+	195	1	Intergenic	novelGene_4309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGTATCTTAAAGTTC	NA	False	NA	NA	False	NA	NA	NA	150538574	150538769	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_150538600_150538800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139440	chr5	-	197	1	Intergenic	novelGene_4310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTGGAGACAAGACTTA	4524	False	NA	NA	False	NA	NA	NA	150589990	150589793	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_150589800_150590000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139455	chr5	+	198	1	Intergenic	novelGene_4311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTTAACATTTATTTACT	NA	False	NA	NA	False	NA	NA	NA	150613531	150613729	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_150613500_150613700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139460	chr5	-	186	1	Intergenic	novelGene_4312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAATTTGAAAGCCGGG	NA	False	NA	NA	False	NA	NA	NA	150719064	150718878	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_-_150718900_150719100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139462	chr5	+	192	1	Intergenic	novelGene_4313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATGGTACTGGTATAGC	NA	False	NA	NA	False	NA	NA	NA	151250643	151250835	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr5_+_151250600_151250800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139469	chr5	-	1222	9	FSM	ENSMUSG00000033970.16	ENSMUST00000038131.10	1317	9	34	61	0	2	multi-exon	FALSE	canonical	3	280	junction_1	24.5098832106561	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTGTTTGTGTTTTA	NA	False	NA	-1	True	AATAAA	-22	NA	151574673	151566281	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr5_-_151566569_151567175_151567246_151568077_151568177_151568254_151568392_151568982_151569165_151570903_151571002_151571709_151571778_151573336_151573475_151574530
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139487	chr6	+	3557	28	FSM	ENSMUSG00000001376.18	ENSMUST00000001412.17	3788	28	15	216	-7	0	multi-exon	FALSE	canonical	2	105	junction_25	21.3495308879564	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGTGTGTGAGACTACTA	NA	False	NA	22	True	AATAAA	-19	NA	3498396	3603315	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_3498556_3504868_3504938_3516621_3516745_3517788_3517861_3519216_3519271_3520206_3520278_3522255_3522374_3522682_3522719_3524092_3524176_3532157_3532201_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139491	chr6	-	1498	4	FSM	ENSMUSG00000032757.7	ENSMUST00000049166.5	1516	4	18	0	18	0	multi-exon	FALSE	canonical	3	308	junction_1	40.3016404408335	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTGTGTTCTTGGCAT	-17	True	NA	0	True	ATTAAA	-22	NA	4086954	4076898	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_4078037_4079960_4080018_4082457_4082583_4086776
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139509	chr6	+	190	1	Intergenic	novelGene_4314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAGATCCTGGAAACAGAA	NA	False	NA	NA	False	NA	NA	NA	5222987	5223177	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_5223000_5223200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139530	chr6	-	3119	18	FSM	ENSMUSG00000015112.16	ENSMUST00000188414.4	3121	18	3	-1	3	0	multi-exon	FALSE	canonical	3	190	junction_9	125.074538329783	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCTTGCTCTTGTGT	NA	False	NA	-3	True	AATAAA	-16	NA	6217170	6041217	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110025_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139543	chr6	+	189	1	Intergenic	novelGene_4315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGGGCTAATGGGTGAC	NA	False	NA	NA	False	NA	NA	NA	6537873	6538062	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_6537900_6538100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139550	chr6	-	493	3	FSM	ENSMUSG00000042541.11	ENSMUST00000041111.10	1472	3	-10	989	-5	-989	multi-exon	FALSE	canonical	3	3186	junction_2	110.5	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTTCAGATGTCTTGATC	17	False	6578685	-7	True	AATAAA	-19	NA	6578668	6558282	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_6558492_6560407_6560502_6578478
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139557	chr6	+	756	2	FSM	ENSMUSG00000042505.7	ENSMUST00000040826.6	4323	2	8	3559	5	-3559	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTAGAATTCCAATAAGT	-10	True	NA	NA	False	AATAAA	-19	NA	6956011	7039420	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_6956201_7038853
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139587	chr6	-	2070	12	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_11	2473.51399917854	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	1710	False	NA	-9	True	AATAAA	-17	NA	7693111	7675168	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7692896
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139591	chr6	-	3470	11	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	45	0	intron_retention	FALSE	canonical	0	0	junction_6	2603.59724419888	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	5	True	NA	-9	True	AATAAA	-17	NA	7693209	7675168	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7681571_7681650_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139603	chr6	-	2994	11	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	45	0	intron_retention	FALSE	canonical	3	8132	junction_6	326.707652190762	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	5	True	NA	-9	True	AATAAA	-17	NA	7693209	7675168	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139630	chr6	+	192	1	Intergenic	novelGene_4316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAGATTGATGGCTCAGT	NA	False	NA	NA	False	NA	NA	NA	8243662	8243854	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_8243700_8243900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139635	chr6	-	671	4	FSM	ENSMUSG00000012483.5	ENSMUST00000012627.5	670	4	0	-1	0	1	multi-exon	FALSE	canonical	3	1410	junction_2	59.4474557908074	228	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGGTCAATTGTTTTT	NA	False	NA	-10	True	AATAAA	-15	NA	8259173	8255934	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_8256248_8256694_8256804_8257686_8257762_8258999
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139650	chr6	-	1743	14	FSM	ENSMUSG00000062995.13	ENSMUST00000038403.12	2075	14	332	0	2	0	multi-exon	FALSE	canonical	3	58	junction_8	7.8401183423021	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATTCACTCCTGTTTGGT	-18	True	NA	-1	True	AATAAA	-35	NA	8778152	8630526	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_8630798_8643972_8644243_8653496_8653536_8653629_8653693_8656361_8656409_8658219_8658315_8670693_8670793_8672297_8672424_8737016_8737216_8742254_8742379_8749694_8749768_8754588_8754752_8758365_8758459_8778071
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139658	chr6	+	189	1	Intergenic	novelGene_4317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTGAAATAGTATCTTC	NA	False	NA	NA	False	NA	NA	NA	10100451	10100640	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_10100500_10100600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139664	chr6	+	216	1	Intergenic	novelGene_4318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAGCAAACCCACCCAA	NA	False	NA	NA	False	NA	NA	NA	10709259	10709475	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_10709300_10709500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139671	chr6	+	185	1	Intergenic	novelGene_4319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATTTATTATTATTAATA	NA	False	NA	NA	False	NA	NA	NA	11286351	11286536	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_11286400_11286500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139682	chr6	-	530	4	FSM	ENSMUSG00000029632.8	ENSMUST00000204978.3	610	4	0	80	0	0	multi-exon	FALSE	canonical	3	8511	junction_2	453.262494465281	540	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTGTCACTATTTAATGC	-31	True	NA	-11	True	AATAAA	-15	NA	11907482	11900370	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_11900591_11905200_11905262_11906018_11906108_11907322
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139698	chr6	+	3121	18	NIC	ENSMUSG00000029629.18	novel	727	6	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_1	28.9182118357714	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGTATTTGAAATTCATA	-16	True	NA	5	True	AATAAA	-16	NA	11907847	12081197	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_+_11908017_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983_12007106_12047825_12047944_12080995
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139716	chr6	-	204	1	Intergenic	novelGene_4320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAAATGTTTGTACAATA	NA	False	NA	NA	False	TTTAAA	-6	NA	11937616	11937412	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_11937400_11937600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139726	chr6	+	203	1	Intergenic	novelGene_4321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAGAACAGTCACTCTC	NA	False	NA	NA	False	NA	NA	NA	12831370	12831573	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_12831400_12831600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139731	chr6	+	6056	9	FSM	ENSMUSG00000029571.15	ENSMUST00000031556.14	6002	9	-57	3	23	-3	multi-exon	FALSE	canonical	3	91	junction_1	9.57127865021179	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGGGTCATCCTCTTG	-32	True	NA	15	True	AATAAA	-16	NA	13069780	13089265	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_13069960_13070306_13070414_13071740_13071963_13075034_13075099_13078090_13078251_13081538_13081680_13082411_13082462_13083367_13083422_13084186
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139741	chr6	-	4109	5	FSM	ENSMUSG00000029569.10	ENSMUST00000031554.9	4587	5	55	423	-1	-423	multi-exon	TRUE	canonical	3	155	junction_4	32.9194091684526	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTGTGCATCTTGA	-14	True	NA	NA	False	AATAAA	-4	NA	13608044	13581108	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236_13603487_13607828
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139770	chr6	+	3417	5	FSM	ENSMUSG00000041390.19	ENSMUST00000189359.7	3435	5	18	0	18	0	multi-exon	FALSE	canonical	3	76	junction_1	30.3016088681773	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTTAAGATCTTTTTT	-23	True	NA	12	True	ATTAAA	-20	NA	15720677	15802168	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_15720963_15721185_15721364_15740986_15741110_15770212_15770492_15799616
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139789	chr6	+	2442	7	FSM	ENSMUSG00000029552.20	ENSMUST00000115467.11	2440	7	0	-2	0	2	multi-exon	FALSE	canonical	3	87	junction_1	5.93717104351896	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGTCTTTCTATGTCCT	-34	True	NA	NA	False	AATAAA	-17	NA	17065147	17105824	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_17065313_17086135_17086222_17096126_17096380_17097259_17097590_17099702_17099919_17100280_17100440_17104591
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139796	chr6	-	194	1	Intergenic	novelGene_4322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTACCGGAGCAGGCAAC	NA	False	NA	NA	False	NA	NA	NA	17315532	17315338	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_17315300_17315500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139798	chr6	+	198	1	Intergenic	novelGene_4323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGACAAATGGGACCTC	NA	False	NA	NA	False	NA	NA	NA	17396328	17396526	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_17396300_17396500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139809	chr6	+	2492	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	41	4	-11	-4	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATTTGGTAAGTTGTGTG	-15	True	NA	NA	False	AGTAAA	-15	NA	17637022	17666967	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139827	chr6	-	227	1	Intergenic	novelGene_4324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTATCTAGATTCTTT	9651	False	NA	-1	True	AATAAA	-15	NA	20960692	20960465	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_20960500_20960700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139843	chr6	+	192	1	Intergenic	novelGene_4325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAATATTTTCTTCATTT	NA	False	NA	NA	False	NA	NA	NA	22305324	22305516	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_22305300_22305500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139849	chr6	-	2850	10	FSM	ENSMUSG00000029672.17	ENSMUST00000165576.8	2826	10	-24	0	-24	0	multi-exon	FALSE	canonical	3	400	junction_3	15.4416464292006	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTAGTAGTTGCAGTGAT	-6	True	NA	0	True	ATTAAA	-22	NA	22356189	22306518	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22329577_22329608_22339271_22339377_22343264_22343319_22355993
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139856	chr6	+	183	1	Intergenic	novelGene_4326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGTTAATGTATAGCAAA	NA	False	NA	NA	False	NA	NA	NA	22356971	22357154	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_22357000_22357200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139866	chr6	-	181	1	Intergenic	novelGene_4327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGCAATGTGAAATCGAG	3681	False	NA	NA	False	NA	NA	NA	22388388	22388207	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_22388200_22388400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139868	chr6	+	201	1	Intergenic	novelGene_4328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGAGAAACGGAAGTTCT	NA	False	NA	NA	False	NA	NA	NA	22472624	22472825	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_22472600_22472800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139870	chr6	+	192	1	Intergenic	novelGene_4329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTGAAGAAAATACTCCGG	NA	False	NA	NA	False	NA	NA	NA	22830876	22831068	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_22830900_22831100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139880	chr6	-	449	5	FSM	ENSMUSG00000023089.13	ENSMUST00000023851.9	875	5	430	-4	-13	4	multi-exon	FALSE	canonical	3	2597	junction_4	429.359042643799	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCCATGTTATTGACTT	-17	True	NA	-27	True	ATTAAA	-31	NA	24527582	24518660	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_24518824_24519190_24519257_24522657_24522775_24527271_24527317_24527524
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139894	chr6	+	183	1	Intergenic	novelGene_4330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	637	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAATAGCTCCATTTACA	NA	False	NA	NA	False	NA	NA	NA	24911458	24911641	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_24911500_24911600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139911	chr6	-	2950	18	FSM	ENSMUSG00000029676.16	ENSMUST00000115330.8	3151	18	-4	205	-4	-205	multi-exon	TRUE	canonical	3	94	junction_8	16.939542404853	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGTCTGTGTGTGTG	-4	True	NA	-3	True	AATAAA	-17	NA	25809229	25743940	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758816_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25798007_25798055_25800282_25800510_25805873_25805941_25809173
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139924	chr6	+	187	1	Intergenic	novelGene_4331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTAATCAATTAATACTGC	NA	False	NA	NA	False	NA	NA	NA	26968334	26968521	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_26968300_26968500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139935	chr6	-	4063	2	FSM	ENSMUSG00000029708.10	ENSMUST00000090511.4	4650	2	-1	588	-1	-588	multi-exon	FALSE	canonical	3	46	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTTCTTAATGGTG	-14	True	NA	0	True	ATTAAA	-15	NA	28421724	28416677	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_28419300_28420283
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139945	chr6	+	1156	6	FSM	ENSMUSG00000020440.14	ENSMUST00000020717.12	1116	6	-35	-5	-35	5	multi-exon	TRUE	canonical	3	1725	junction_4	143.712769091685	227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTCTGTTGCCTGGAAG	1736	False	NA	22	True	AATAAA	-22	NA	28423523	28426606	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_28423755_28424288_28424370_28424720_28424831_28425171_28425244_28425737_28425864_28426070
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139953	chr6	+	201	1	Intergenic	novelGene_4332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATCCAAGGAATGAGGGA	NA	False	NA	NA	False	NA	NA	NA	28443157	28443358	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_28443200_28443400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139957	chr6	+	3505	24	FSM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	-23	0	-23	0	multi-exon	FALSE	canonical	3	582	junction_3	55.1049865830108	727	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTGGAGCCAGAACACTG	5212	False	NA	30	True	AATAAA	-31	NA	28480323	28888831	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_28480642_28512833_28512984_28520143_28520265_28523725_28523805_28526051_28526213_28526907_28527000_28527575_28527735_28528911_28529019_28531407_28531499_28545483_28545598_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139970	chr6	-	4163	19	FSM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	305	-3	305	3	multi-exon	FALSE	canonical	3	173	junction_12	24.6131175505167	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	-20	True	NA	-1	True	NA	NA	NA	29164700	29123571	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154752_29154893_29155025_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139993	chr6	-	2568	15	FSM	ENSMUSG00000003500.14	ENSMUST00000159124.8	2600	15	31	1	-2	0	multi-exon	FALSE	canonical	1	64	junction_14	59.8544152123146	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGATCCTGTTTCTG	-14	True	NA	-2	True	AATAAA	-18	NA	29216332	29200436	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067_29212167_29216070
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000139995	chr6	-	2428	14	FSM	ENSMUSG00000003500.14	ENSMUST00000078155.12	2437	14	8	1	8	0	multi-exon	TRUE	canonical	1	70	junction_10	46.9877234375763	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGATCCTGTTTCTG	4060	False	29212304	-2	True	AATAAA	-18	NA	29212288	29200436	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140007	chr6	+	177	1	Intergenic	novelGene_4333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAATGTACTTTTTCTT	6851	False	NA	6	True	NA	NA	NA	29255504	29255681	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_29255500_29255700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140013	chr6	+	952	2	FSM	ENSMUSG00000043421.9	ENSMUST00000054445.9	982	2	30	0	30	0	multi-exon	FALSE	canonical	3	124	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTGTCCTGTTGACATG	31	False	NA	14	True	AATAAA	-21	NA	29272654	29275445	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_29272810_29274648
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140023	chr6	+	184	1	Intergenic	novelGene_4334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAATAAAGTAGCTC	NA	False	NA	NA	False	NA	NA	NA	29346735	29346919	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_29346700_29346900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140030	chr6	+	3219	7	FSM	ENSMUSG00000029767.17	ENSMUST00000090481.14	2670	7	-4	-545	-4	-1	multi-exon	FALSE	canonical	3	300	junction_2	301.970979105977	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATGTGTCTTTTATTCT	NA	False	NA	117	True	AATAAA	-21	NA	29348113	29376673	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_29348208_29356469_29356697_29361558_29361753_29366038_29366206_29366915_29366977_29372469_29372670_29374397
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140031	chr6	+	3220	7	FSM	ENSMUSG00000029767.17	ENSMUST00000031779.17	3229	7	9	0	-4	0	multi-exon	FALSE	canonical	3	608	junction_2	154.523730647863	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTGTCTTTTATTCTC	NA	False	NA	118	True	AATAAA	-22	NA	29348113	29376674	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_29348208_29356469_29356697_29361292_29361487_29366038_29366206_29366915_29366977_29372469_29372670_29374397
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140051	chr6	+	174	1	Intergenic	novelGene_4335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGTGGAAAGC	NA	False	NA	NA	False	NA	NA	NA	29390685	29390859	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_29390700_29390900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140058	chr6	+	682	2	FSM	ENSMUSG00000004285.13	ENSMUST00000004396.13	703	2	21	0	21	0	multi-exon	FALSE	canonical	3	1924	junction_1	0	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTACTGGTATGGATACG	-11	True	NA	37	True	ATTAAA	-19	NA	29467737	29470511	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_29467974_29470065
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140076	chr6	-	4251	23	FSM	ENSMUSG00000012535.15	ENSMUST00000012679.15	4251	23	2	-2	2	2	multi-exon	FALSE	canonical	3	521	junction_17	54.5301683125804	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTTTTATTTCCCTT	NA	False	NA	0	True	TTTAAA	-7	NA	29609884	29540823	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140085	chr6	-	4171	22	NIC	ENSMUSG00000012535.15	novel	3989	23	NA	NA	-4	0	intron_retention	FALSE	canonical	3	521	junction_16	53.4311602802044	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTGTTTTTATTTCCC	9	True	NA	-2	True	TTTAAA	-5	NA	29609616	29540825	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140096	chr6	+	174	1	Intergenic	novelGene_4336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAATTAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	29602948	29603122	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_29602900_29603100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140099	chr6	+	175	1	Intergenic	novelGene_4337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAATTTTAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	29604331	29604506	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_29604300_29604500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140109	chr6	+	2026	8	FSM	ENSMUSG00000001763.15	ENSMUST00000046750.14	1994	8	-34	2	-34	0	multi-exon	FALSE	canonical	3	27	junction_2	5.15474815790535	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAGCTGTCCTACATCAA	-2	True	NA	7	True	AATAAA	-16	NA	29694186	29718556	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_29694544_29709939_29709998_29710585_29710714_29711014_29711090_29713437_29713534_29716703_29716833_29717188_29717351_29717535
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140118	chr6	+	185	1	Genic_Genomic	ENSMUSG00000001763.15	novel	NA	NA	NA	NA	6625	15	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGGGCAATCATACTGTA	NA	False	NA	NA	False	NA	NA	NA	29714651	29714836	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr6_+_29714700_29714800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140121	chr6	+	188	1	Intergenic	novelGene_4338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTTCCTCTCCCTGCCTT	NA	False	NA	NA	False	NA	NA	NA	29730377	29730565	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_29730400_29730600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140139	chr6	+	5165	17	FSM	ENSMUSG00000029772.18	ENSMUST00000102995.9	5155	17	-4	-6	-4	0	multi-exon	FALSE	canonical	3	86	junction_2	15.2883738507403	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGTCCTGAGAATACCA	-33	True	NA	9	True	AATAAA	-17	NA	29768474	29912309	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_29768906_29863141_29863251_29870566_29870711_29871184_29871286_29878527_29878631_29880547_29880643_29883621_29883729_29886116_29886234_29890679_29890744_29891199_29891289_29894817_29894889_29896320_29896416_29903187_29903287_29906506_29906576_29906679_29906759_29908345_29908467_29909038
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140154	chr6	-	157	1	Intergenic	novelGene_4339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAATAGAGCTAGCA	NA	False	NA	NA	False	NA	NA	NA	29780753	29780596	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_29780600_29780800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140162	chr6	+	182	1	Intergenic	novelGene_4340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATAATACTGACAGTTT	NA	False	NA	NA	False	NA	NA	NA	29788299	29788481	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_29788300_29788500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140171	chr6	+	198	1	Intergenic	novelGene_4341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAATAGCAACAACAACAAA	NA	False	NA	NA	False	NA	NA	NA	29816211	29816409	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_29816200_29816400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140177	chr6	+	206	1	Intergenic	novelGene_4342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAGCTTTAAAATAAGGAA	7931	False	NA	NA	False	NA	NA	NA	29867624	29867830	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_29867600_29867800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140185	chr6	+	177	1	Intergenic	novelGene_4343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAAGGGGCTGATGAG	NA	False	NA	NA	False	NA	NA	NA	29982617	29982794	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_29982600_29982800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140194	chr6	+	176	1	Intergenic	novelGene_4344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATAGAAAAGCTGAG	NA	False	NA	NA	False	NA	NA	NA	29982802	29982978	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_29982800_29983000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140201	chr6	+	218	1	Intergenic	novelGene_4345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTAACAATCCTAAACTAAA	NA	False	NA	NA	False	AAAAAG	-16	NA	29999380	29999598	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_29999400_29999600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140206	chr6	+	199	1	Intergenic	novelGene_4346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTCTCCCACTAATGAC	NA	False	NA	NA	False	TTTAAA	-3	NA	30037848	30038047	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_30037800_30038000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140215	chr6	+	196	1	Intergenic	novelGene_4347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1598	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCAGTCGACTGATAGTC	NA	False	NA	NA	False	NA	NA	NA	30038742	30038938	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_30038700_30038900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140224	chr6	+	194	1	Intergenic	novelGene_4348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTGTACAGAACTAATATA	NA	False	NA	NA	False	NA	NA	NA	30045006	30045200	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_30045000_30045200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140230	chr6	+	2315	12	NIC	ENSMUSG00000058440.15	novel	3584	12	NA	NA	-3	-16	combination_of_known_junctions	FALSE	canonical	3	218	junction_2	102.024061333144	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGGCTTTACTGAGGTA	-31	True	NA	NA	False	AATAAA	-43	NA	30047983	30140887	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_+_30048113_30088831_30088988_30089913_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140232	chr6	+	2318	12	NIC	ENSMUSG00000058440.15	novel	3295	12	NA	NA	-3	-16	combination_of_known_junctions	FALSE	canonical	3	271	junction_11	90.9985923058862	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGGCTTTACTGAGGTA	-31	True	NA	NA	False	AATAAA	-43	NA	30047983	30140887	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_+_30048113_30088831_30088988_30089910_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140238	chr6	+	2354	13	NIC	ENSMUSG00000058440.15	novel	3295	12	NA	NA	-3	-16	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	163.040383545509	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGGCTTTACTGAGGTA	-31	True	NA	NA	False	AATAAA	-43	NA	30047983	30140887	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_+_30048113_30088831_30088988_30089910_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140277	chr6	+	1927	13	NIC	ENSMUSG00000058440.15	novel	1879	12	NA	NA	10	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	178.740889433715	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTATGGTTTGGGCT	-4	True	NA	3	True	AATAAA	-19	NA	30048010	30144855	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_+_30048113_30088831_30088988_30089913_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30144579
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140308	chr6	-	175	1	Intergenic	novelGene_4349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAATTGGTGCCACA	NA	False	NA	NA	False	NA	NA	NA	30058689	30058514	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_30058500_30058700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140317	chr6	+	197	1	Intergenic	novelGene_4350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCCGGGCAGTGGTAGT	NA	False	NA	NA	False	NA	NA	NA	30203676	30203873	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_30203700_30203900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140335	chr6	+	182	1	Intergenic	novelGene_4351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATAACCAGCAGCAGCCT	NA	False	NA	NA	False	NA	NA	NA	30290236	30290418	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_30290200_30290400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140342	chr6	+	164	1	Intergenic	novelGene_4352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAGAAGAAGAAGAATG	NA	False	NA	NA	False	NA	NA	NA	30324456	30324620	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_30324500_30324600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140364	chr6	-	176	1	Intergenic	novelGene_4353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCGGAGCACACCAGGCC	NA	False	NA	NA	False	NA	NA	NA	30427255	30427079	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_30427100_30427300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140366	chr6	-	212	1	Intergenic	novelGene_4354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAATGGACGGATCTAGA	3502	False	NA	NA	False	NA	NA	NA	30474048	30473836	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_30473800_30474000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140387	chr6	-	177	1	ISM	ENSMUSG00000029782.21	ENSMUST00000150480.2	3128	4	2426	2371	2408	-1368	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTATAATAATAATAATAAT	2452	False	NA	NA	False	NA	NA	NA	30507295	30507118	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr6_-_30507100_30507300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140391	chr6	+	186	1	Intergenic	novelGene_4355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGTAGTTCAAAACTAT	NA	False	NA	NA	False	NA	NA	NA	30537389	30537575	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_30537400_30537600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140395	chr6	-	3430	11	FSM	ENSMUSG00000029790.17	ENSMUST00000031810.15	3447	11	17	0	17	0	multi-exon	TRUE	canonical	3	75	junction_8	9.18095855561934	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCGTTTGCTATTAATG	-24	True	NA	0	True	ATTAAA	-16	NA	30693731	30653455	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_30655850_30656477_30656694_30657296_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30666265_30666336_30667379_30667442_30671321_30671370_30680129_30680194_30693635
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140406	chr6	+	2597	12	FSM	ENSMUSG00000051855.16	ENSMUST00000163949.9	2561	12	-32	-4	-32	1	multi-exon	FALSE	canonical	3	246	junction_7	40.2939611577855	259	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGCTTCCCCTCCCCCT	NA	False	NA	17	True	AATAAA	-23	NA	30738016	30748465	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_30738335_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140431	chr6	+	179	1	Intergenic	novelGene_4356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAGAGGGAGATGGG	NA	False	NA	NA	False	NA	NA	NA	31371448	31371627	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_31371400_31371600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140438	chr6	+	6409	18	FSM	ENSMUSG00000025609.16	ENSMUST00000026699.15	11395	18	77	4909	-16	3934	multi-exon	FALSE	canonical	1	225	junction_9	99.990726213583	284	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGCCATTTTCTTTT	NA	False	NA	NA	False	AGTAAA	-32	NA	31375746	31488837	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_31375890_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140450	chr6	+	177	1	Intergenic	novelGene_4357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATTAAAATTACG	NA	False	NA	NA	False	NA	NA	NA	31474001	31474178	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_31474000_31474200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140464	chr6	-	1552	8	FSM	ENSMUSG00000053768.14	ENSMUST00000066379.11	1550	8	-2	0	-2	0	multi-exon	FALSE	canonical	3	834	junction_3	29.0320020470023	364	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGACTAAGACTGGCC	NA	False	NA	-10	True	AATAAA	-25	NA	33037197	32769151	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_32769862_32780824_32780961_32829079_32829151_32869226_32869311_32945135_32945254_32985417_32985500_33026271_33026360_33036934
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140486	chr6	+	178	1	Intergenic	novelGene_4358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGCCCAAATTATACCTG	7237	False	NA	NA	False	NA	NA	NA	33657367	33657545	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_33657400_33657500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140502	chr6	-	1402	10	FSM	ENSMUSG00000001642.19	ENSMUST00000102980.11	1387	10	-12	-3	-12	3	multi-exon	FALSE	canonical	3	629	junction_4	199.673498924718	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTGGTCCGTTTTGTTC	NA	False	NA	-2	True	AATAAA	-19	NA	34294425	34280865	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_34281275_34283474_34283558_34285913_34285998_34286510_34286593_34286895_34287003_34287447_34287571_34287859_34287938_34288856_34288974_34289574_34289743_34294274
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140524	chr6	+	4050	12	FSM	ENSMUSG00000029761.17	ENSMUST00000115021.8	4041	12	-13	4	-13	1	multi-exon	FALSE	canonical	3	149	junction_3	28.0630930241598	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTCTCGTGCATTC	1244	False	NA	28	True	AATAAA	-16	NA	34686363	34752404	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_34686633_34718723_34718871_34722553_34722951_34730377_34730524_34732568_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037_34743134_34747982_34748064_34750157
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140545	chr6	+	1472	9	FSM	ENSMUSG00000029848.12	ENSMUST00000114999.8	1455	9	-16	-1	-16	1	multi-exon	FALSE	canonical	1	14	junction_3	19.2272592950738	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGGTGTCCTGGCAG	NA	False	NA	12	True	TATAAA	-17	NA	34897878	34916278	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_34897990_34904653_34904852_34907295_34907372_34907817_34907903_34909932_34910221_34911014_34911301_34912517_34912592_34914967_34915080_34916036
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140551	chr6	-	181	1	Intergenic	novelGene_4359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAGTACAAATGGCATTG	NA	False	NA	NA	False	NA	NA	NA	34917079	34916898	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_34916900_34917100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140564	chr6	-	3511	12	FSM	ENSMUSG00000038784.14	ENSMUST00000114993.9	3473	12	-32	-6	3	0	multi-exon	FALSE	canonical	3	79	junction_2	43.8453329687493	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCGGGTGAGTCTTGTTC	7649	False	NA	-2	True	AATAAA	-20	NA	35110656	34998999	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_35000368_35001062_35001276_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140578	chr6	+	2661	1	Intergenic	novelGene_4360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATACTGTGCCAATATCC	NA	False	NA	NA	False	NA	NA	NA	35016548	35019209	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_35016500_35019200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140592	chr6	-	212	1	Intergenic	novelGene_4361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATATTGATCTTGCATCT	9843	False	NA	NA	False	AAGAAA	-14	NA	35091127	35090915	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_35090900_35091100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140600	chr6	+	197	1	Intergenic	novelGene_4362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACGTTCTTCTGGGTAGG	NA	False	NA	NA	False	NA	NA	NA	35124409	35124606	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_35124400_35124600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140616	chr6	+	2409	15	FSM	ENSMUSG00000038759.16	ENSMUST00000202898.2	2409	15	1	-1	1	1	multi-exon	FALSE	canonical	2	193	junction_5	41.0390555645796	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTATTCCTTCTTGGA	NA	False	NA	NA	False	AATAAA	-16	NA	35154551	35182589	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140645	chr6	+	209	1	Intergenic	novelGene_4363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAAAAACTAGTTGAGTCA	NA	False	NA	NA	False	NA	NA	NA	35249910	35250119	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_35249900_35250100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140661	chr6	+	3780	1	FSM	ENSMUSG00000107310.2	ENSMUST00000202891.2	3039	1	-199	-542	-151	542	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAAATAAAAAGGGGGGA	NA	False	NA	NA	False	NA	NA	NA	36933585	36937365	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_36933600_36937400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140676	chr6	-	3216	12	FSM	ENSMUSG00000038648.6	ENSMUST00000041093.6	7082	12	-1	3867	-1	3170	multi-exon	FALSE	canonical	3	82	junction_10	9.34552529156102	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTCCTCTTTCATACAA	NA	False	NA	NA	False	ATTAAA	-25	NA	37419082	37308056	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37356746_37356964_37418633
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140688	chr6	+	197	1	Intergenic	novelGene_4364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATGGATGCTGGGGAGC	NA	False	NA	NA	False	NA	NA	NA	37432321	37432518	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_37432300_37432500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140700	chr6	+	221	1	Intergenic	novelGene_4365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTCAAAACAGGGTTTCT	NA	False	NA	NA	False	AAGAAA	-21	NA	37650801	37651022	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_37650800_37651000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140703	chr6	+	163	1	Intergenic	novelGene_4366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAATACACATTTGTCA	NA	False	NA	NA	False	NA	NA	NA	37662770	37662933	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_37662800_37662900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140713	chr6	+	184	1	Intergenic	novelGene_4367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAACAAACTAGTTAATTA	NA	False	NA	NA	False	NA	NA	NA	37723036	37723220	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_37723000_37723200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140720	chr6	+	1146	1	FSM	ENSMUSG00000080242.6	ENSMUST00000122373.2	465	1	-111	-570	-111	570	mono-exon	FALSE	NA	NA	NA	NA	NA	452	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAAATCCTAAAGCACCC	NA	False	NA	NA	False	AATAAA	-44	NA	37782909	37784055	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_37782900_37784100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140729	chr6	+	195	1	Intergenic	novelGene_4368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGAAAGAAAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	37821718	37821913	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_37821700_37821900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140735	chr6	+	3986	19	FSM	ENSMUSG00000029833.18	ENSMUST00000120428.8	3940	19	-46	0	-46	0	multi-exon	FALSE	canonical	3	354	junction_9	66.0549014078441	218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37847699	37943231	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140758	chr6	+	201	1	Intergenic	novelGene_4369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	765	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCCTTCACGTCAGAC	NA	False	NA	NA	False	NA	NA	NA	38034694	38034895	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_38034700_38034900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140766	chr6	-	155	1	Intergenic	novelGene_4370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTCTTGCTTATAAATAC	NA	False	NA	NA	False	AATAAA	-12	NA	38085237	38085082	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_38085100_38085200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140774	chr6	+	191	1	Intergenic	novelGene_4371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAGAGGGTACCCAAGGG	NA	False	NA	NA	False	NA	NA	NA	38212818	38213009	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_38212800_38213000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140781	chr6	-	6573	4	FSM	ENSMUSG00000047749.3	ENSMUST00000058524.3	6536	4	-29	-8	-29	8	multi-exon	FALSE	canonical	3	137	junction_1	7.31816613336672	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATAGTGATTTTCTTTTT	NA	False	NA	1	True	AATAAA	-22	NA	38276223	38264322	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_38270073_38271992_38272255_38274886_38275023_38275798
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140796	chr6	-	911	1	ISM	ENSMUSG00000029826.15	ENSMUST00000114900.8	4944	13	48063	14	48063	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTGCCCTCATTTGGT	NA	False	NA	-14	True	AATAAA	-18	NA	38283145	38282234	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr6_-_38282200_38283100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140800	chr6	+	190	1	Intergenic	novelGene_4372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGCATGGCAGCCCCCA	6795	False	NA	NA	False	NA	NA	NA	38291266	38291456	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_38291300_38291500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140803	chr6	-	3400	9	FSM	ENSMUSG00000029826.15	ENSMUST00000031850.10	3400	9	0	0	0	0	multi-exon	TRUE	canonical	3	57	junction_7	12.2212673238089	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCAGTTGGATTTTTTT	9664	False	NA	-3	True	NA	NA	NA	38331538	38292602	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154_38317291_38330849
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140816	chr6	+	357	1	Intergenic	novelGene_4373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATTGTAAGTAAATC	NA	False	NA	NA	False	NA	NA	NA	38336211	38336568	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_38336200_38336600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140822	chr6	+	179	1	Intergenic	novelGene_4374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTAAAGATTT	NA	False	NA	NA	False	NA	NA	NA	38339742	38339921	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_38339700_38339900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140838	chr6	-	191	1	Intergenic	novelGene_4375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGATTTGCACCTAGCAT	NA	False	NA	NA	False	TTTAAA	-4	NA	38359933	38359742	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_38359700_38359900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140840	chr6	+	206	1	Intergenic	novelGene_4376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCTAGGTACAGTGTAC	NA	False	NA	NA	False	NA	NA	NA	38366272	38366478	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_38366300_38366500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140844	chr6	+	147	1	Intergenic	novelGene_4377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGTTAGCTGACCTGCA	NA	False	NA	NA	False	NA	NA	NA	38409626	38409773	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_38409600_38409800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140845	chr6	+	182	1	Intergenic	novelGene_4378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTTGAAAAGAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	38427786	38427968	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_38427800_38428000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140850	chr6	-	224	1	Intergenic	novelGene_4379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGCACTTGGGAGGCAG	NA	False	NA	NA	False	NA	NA	NA	38505393	38505169	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_38505200_38505400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140867	chr6	+	191	1	Intergenic	novelGene_4380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAATTCTGACATTTTTA	9633	False	NA	NA	False	NA	NA	NA	38523575	38523766	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_38523600_38523800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140872	chr6	+	1663	2	FSM	ENSMUSG00000029823.17	ENSMUST00000160922.5	3448	2	-87	1872	-21	-1741	multi-exon	FALSE	canonical	3	85	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTATAGACCCAAAGTGTA	NA	False	NA	NA	False	AATAAA	-42	NA	38528378	38533112	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_38528844_38531914
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140890	chr6	+	190	1	Intergenic	novelGene_4381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTAATAGATTTGTTATG	727	False	NA	NA	False	NA	NA	NA	38559682	38559872	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_38559700_38559900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140893	chr6	+	219	1	ISM	ENSMUSG00000029823.17	ENSMUST00000161538.8	4253	8	54679	5	36042	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACAATTTGTGAGAAGG	1093	False	NA	NA	False	TTTAAA	-11	NA	38583078	38583297	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr6_+_38583100_38583300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140900	chr6	+	183	1	Intergenic	novelGene_4382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTCATGAGTTAATAGC	9883	False	NA	NA	False	NA	NA	NA	38620999	38621182	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_38621000_38621200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140922	chr6	-	184	1	Intergenic	novelGene_4383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATTAAAAAAAAGATTCT	NA	False	NA	NA	False	NA	NA	NA	39288261	39288077	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_39288100_39288300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140928	chr6	+	199	1	Intergenic	novelGene_4384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACACTCTGAACCTTTAA	NA	False	NA	NA	False	NA	NA	NA	39296650	39296849	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_39296600_39296800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140934	chr6	-	4052	15	FSM	ENSMUSG00000029924.13	ENSMUST00000090243.8	4030	15	-19	-3	-19	3	multi-exon	TRUE	canonical	3	160	junction_14	38.6108925098626	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCCCTTAAGTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	39354628	39311703	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140960	chr6	+	203	1	Intergenic	novelGene_4385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAATCGAAATGCATCAAA	NA	False	NA	NA	False	NA	NA	NA	39342759	39342962	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_39342800_39343000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140968	chr6	-	186	1	Intergenic	novelGene_4386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAATAATGTATCTTTGT	3236	False	NA	NA	False	NA	NA	NA	39344194	39344008	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_39344000_39344200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140972	chr6	+	210	1	Intergenic	novelGene_4387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	722	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAATGCATTCCACCTCA	NA	False	NA	NA	False	NA	NA	NA	39345661	39345871	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_39345700_39345900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140987	chr6	-	3087	8	FSM	ENSMUSG00000029922.16	ENSMUST00000031985.13	3046	8	-40	-1	-40	1	multi-exon	FALSE	canonical	3	1453	junction_3	1193.53149458715	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGTGTGATGACCTG	NA	False	NA	5	True	AATAAA	-25	NA	39397436	39374736	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140991	chr6	-	2912	8	NNC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	159	junction_1	1397.39899784695	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	4	True	AATAAA	-24	NA	39397386	39374737	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_-_39376245_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000140997	chr6	-	2912	8	NIC	ENSMUSG00000029922.16	novel	2992	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	157	junction_7	1165.4745726921	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	4	True	AATAAA	-24	NA	39397003	39374737	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39396773
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141007	chr6	-	2810	7	NIC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	3	82	junction_4	1528.48450724529	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	4	True	AATAAA	-24	NA	39397387	39374737	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39382664_39382895_39387021_39387151_39397032
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141020	chr6	-	1609	5	FSM	ENSMUSG00000029922.16	ENSMUST00000051671.11	1511	5	-95	-3	9	-3	multi-exon	FALSE	canonical	3	1568	junction_2	1258.9473777724	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTCTGTGTGAAATGTCT	NA	False	NA	-2	True	AATAAA	-19	NA	39397387	39377690	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141042	chr6	+	120	1	Intergenic	novelGene_4388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCTGAACTAGCTGAATGA	7780	False	NA	NA	False	NA	NA	NA	39389178	39389298	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_39389200_39389300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141058	chr6	-	232	1	Intergenic	novelGene_4389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCTATTGTGAATTATAA	NA	False	NA	NA	False	NA	NA	NA	39430292	39430060	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_39430100_39430300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141069	chr6	-	196	1	Genic_Genomic	ENSMUSG00000038456.10	novel	NA	NA	NA	NA	7755	4	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTAGTGAGTGTATAATA	8074	False	NA	-3	True	AATAAA	-25	NA	39439503	39439307	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr6_-_39439300_39439500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141082	chr6	+	225	1	Intergenic	novelGene_4390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATATTTAATAAATACCAAA	NA	False	NA	NA	False	NA	NA	NA	39477855	39478080	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_39477900_39478100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141093	chr6	+	106	1	Intergenic	novelGene_4391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTAGGAGTGTCTTTGAT	NA	False	NA	NA	False	NA	NA	NA	39538907	39539013	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_39538900_39539000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141105	chr6	+	474	4	FSM	ENSMUSG00000002416.14	ENSMUST00000119379.2	455	4	-18	-1	-9	1	multi-exon	FALSE	canonical	3	713	junction_3	851.269770532363	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATGTTTCTGATGACAAC	NA	False	NA	31	True	ATTAAA	-40	NA	39569498	39576406	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_39569647_39573384_39573530_39575199_39575300_39576325
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141125	chr6	-	186	1	Intergenic	novelGene_4392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTTGCCTTTAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	39742490	39742304	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_39742300_39742500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141129	chr6	-	175	1	Intergenic	novelGene_4393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAATGGCAACAACAA	NA	False	NA	0	True	NA	NA	NA	39764387	39764212	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_39764200_39764400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141147	chr6	-	181	1	Intergenic	novelGene_4394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGCATTAAATATAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	39818836	39818655	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_39818700_39818800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141153	chr6	-	214	1	Intergenic	novelGene_4395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGCCACAGTTACCAT	NA	False	NA	NA	False	NA	NA	NA	39819618	39819404	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_39819400_39819600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141156	chr6	+	197	1	Intergenic	novelGene_4396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCTGATGATTCCTAGG	-1	True	NA	NA	False	NA	NA	NA	39872212	39872409	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_39872200_39872400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141173	chr6	+	2288	17	NIC	ENSMUSG00000029916.12	novel	2531	16	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_5	181.494049058778	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGTGTAATCTAAATGCA	NA	False	NA	8	True	NA	NA	NA	40302428	40373696	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40331947_40332028_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141181	chr6	-	6751	9	FSM	ENSMUSG00000037172.15	ENSMUST00000101492.10	6742	9	-9	0	-9	0	multi-exon	FALSE	canonical	3	15	junction_1	5.09748712602592	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTGCTGTGATCTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	40413078	40378308	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_40383869_40385202_40385272_40385992_40386144_40386275_40386408_40388539_40388679_40395425_40395580_40399659_40399819_40400657_40400758_40412791
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141189	chr6	+	667	7	FSM	ENSMUSG00000029911.15	ENSMUST00000114779.9	4398	7	29	3702	29	3	multi-exon	FALSE	canonical	3	1713	junction_1	435.133695929577	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTATATTTTTCTTGAT	NA	False	NA	NA	False	ATTAAA	-18	NA	40448314	40457932	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_40448394_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141197	chr6	+	811	7	NNC	ENSMUSG00000029911.15	novel	933	7	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1038.11106502789	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGTTATATTTTTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	40448381	40457929	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_+_40448608_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141199	chr6	+	963	7	FSM	ENSMUSG00000029911.15	ENSMUST00000117411.8	933	7	-27	-3	-5	0	multi-exon	FALSE	canonical	3	282	junction_1	935.620961358462	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGTTATATTTTTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	40448381	40457929	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_40448760_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141205	chr6	+	1211	6	FSM	ENSMUSG00000029911.15	ENSMUST00000121360.8	1188	6	-20	-3	-5	3	multi-exon	FALSE	canonical	3	2472	junction_3	238.868666844356	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTATATTTTTCTTGAT	NA	False	NA	NA	False	ATTAAA	-18	NA	40448381	40457932	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141221	chr6	+	3734	5	NIC	ENSMUSG00000029911.15	novel	1188	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	2472	junction_2	182.612123091541	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGTTATATTTTTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	40448386	40457929	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_+_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141227	chr6	+	183	1	Intergenic	novelGene_4397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGTTTATTTAAAAATAC	NA	False	NA	NA	False	NA	NA	NA	41089360	41089543	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_41089400_41089500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141237	chr6	+	3472	11	FSM	ENSMUSG00000029863.14	ENSMUST00000031895.13	3529	11	57	0	-14	0	multi-exon	FALSE	canonical	3	71	junction_8	18.1	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGCCTGGTGTTTTTG	NA	False	NA	13	True	AATAAA	-20	NA	42241975	42259442	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246213_42246391_42250850_42250980_42253628_42253720_42256710_42256861_42257017_42257128_42257279
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141246	chr6	+	2236	10	FSM	ENSMUSG00000029860.17	ENSMUST00000203652.3	2605	10	202	167	-3	3	multi-exon	FALSE	canonical	3	26	junction_4	4.64545443563708	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTAGTACTTGATTTTT	NA	False	NA	6	True	TATAAA	-16	NA	42326963	42335329	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_42327054_42327190_42327411_42327879_42328083_42328203_42328297_42328408_42328904_42332850_42332972_42333095_42333266_42333365_42333545_42334246_42334368_42334785
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141254	chr6	+	198	1	Intergenic	novelGene_4398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCAGATTCTTAGCCTTC	NA	False	NA	NA	False	NA	NA	NA	43313279	43313477	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_43313300_43313500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141276	chr6	-	177	1	Intergenic	novelGene_4399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTAAAGAAATG	NA	False	NA	NA	False	NA	NA	NA	47198949	47198772	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_47198800_47198900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141279	chr6	-	165	1	Intergenic	novelGene_4400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTTTTAAAAAAATTCTAA	NA	False	NA	NA	False	NA	NA	NA	47317296	47317131	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_47317100_47317300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141289	chr6	+	188	1	Intergenic	novelGene_4401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCAGAAAGGTGGGAACT	NA	False	NA	NA	False	NA	NA	NA	47324444	47324632	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_47324400_47324600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141296	chr6	+	221	1	Intergenic	novelGene_4402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATTAGGAGTCTGGGTAA	NA	False	NA	NA	False	NA	NA	NA	47387416	47387637	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_47387400_47387600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141312	chr6	+	3225	22	FSM	ENSMUSG00000029686.16	ENSMUST00000031697.9	3161	22	-59	-5	-59	5	multi-exon	FALSE	canonical	3	398	junction_1	65.0983905600956	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCCATTGTCTTCCTGA	NA	False	NA	24	True	AATAAA	-25	NA	47431194	47503078	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141319	chr6	+	185	1	Intergenic	novelGene_4403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAATTATATGCATGACC	5340	False	NA	NA	False	TTTAAA	-3	NA	47460343	47460528	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_47460300_47460500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141335	chr6	-	2662	20	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	-9	45	combination_of_known_junctions	FALSE	canonical	3	225	junction_17	211.360085807553	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGTCCTAGAACATCA	NA	False	NA	-13	True	AATAAA	-24	NA	47572001	47507207	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47571827
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141338	chr6	-	2689	20	FSM	ENSMUSG00000029687.17	ENSMUST00000081721.13	2787	20	-37	135	-9	45	multi-exon	FALSE	canonical	3	406	junction_7	166.792654135859	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGTCCTAGAACATCA	NA	False	NA	-13	True	AATAAA	-24	NA	47572001	47507207	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141341	chr6	-	2563	19	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	-9	45	combination_of_known_junctions	FALSE	canonical	3	443	junction_6	133.55213528621	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGTCCTAGAACATCA	NA	False	NA	-13	True	AATAAA	-24	NA	47572001	47507207	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141355	chr6	-	2498	19	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	1	45	combination_of_known_junctions	TRUE	canonical	3	225	junction_16	191.882044849961	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGTCCTAGAACATCA	NA	False	NA	-13	True	AATAAA	-24	NA	47571963	47507207	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47571827
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141379	chr6	+	176	1	Intergenic	novelGene_4404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAATAAGTAGATTTAAT	NA	False	NA	NA	False	NA	NA	NA	47583921	47584097	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_47583900_47584100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141381	chr6	-	91	1	Intergenic	novelGene_4405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCACCCTCCGCTCCTCA	4874	False	NA	NA	False	NA	NA	NA	47632028	47631937	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_47631900_47632000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141394	chr6	+	201	1	Intergenic	novelGene_4406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATAAGCTTTGCCCAACA	NA	False	NA	NA	False	NA	NA	NA	47756297	47756498	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_47756300_47756500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141435	chr6	+	2681	5	FSM	ENSMUSG00000052763.8	ENSMUST00000009411.9	2801	5	120	0	120	0	multi-exon	FALSE	canonical	3	116	junction_4	25.1445819213603	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACAGGGTGTTTTCTG	NA	False	NA	24	True	AATAAA	-31	NA	47897529	47909573	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_47897684_47903440_47903831_47903953_47904081_47905983_47906065_47907644
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141454	chr6	+	210	1	Intergenic	novelGene_4407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAACTGGTAGATCTCTG	NA	False	NA	NA	False	NA	NA	NA	47916318	47916528	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_47916300_47916500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141459	chr6	+	2752	5	FSM	ENSMUSG00000045466.19	ENSMUST00000101445.11	2761	5	9	0	9	0	multi-exon	FALSE	canonical	3	26	junction_2	2.77263412660235	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTGTCTTGCCTTGACC	9722	False	NA	18	True	AATAAA	-23	NA	47930332	47942234	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_47930517_47932750_47933105_47934409_47934537_47939458_47939567_47940255
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141469	chr6	-	3225	6	FSM	ENSMUSG00000071477.11	ENSMUST00000095944.10	3184	6	-38	-3	-38	3	multi-exon	FALSE	canonical	3	42	junction_5	33.5463857963865	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTTTCCTGTTTGCTGT	NA	False	NA	0	True	AATAGA	-17	NA	48025883	48001135	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48025626
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141475	chr6	-	3494	6	FSM	ENSMUSG00000071477.11	ENSMUST00000114583.8	3111	6	-398	15	-398	2	multi-exon	FALSE	canonical	3	22	junction_5	40.7401521843009	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGTGTTTCCTGTTTGCTG	NA	False	NA	-1	True	AATAGA	-16	NA	48025446	48001136	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48024919
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141506	chr6	+	209	1	Intergenic	novelGene_4408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGTCTGAGGACCATAAGA	NA	False	NA	NA	False	NA	NA	NA	48056708	48056917	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_48056700_48056900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141524	chr6	-	186	1	Intergenic	novelGene_4409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGATGTTCATAATAACTT	NA	False	NA	NA	False	NA	NA	NA	48479521	48479335	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_48479300_48479500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141525	chr6	+	471	1	FSM	ENSMUSG00000095526.3	ENSMUST00000117571.2	333	1	-62	-76	-62	76	mono-exon	FALSE	NA	NA	NA	NA	NA	915	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAATGAAAAAAATTTA	NA	False	NA	NA	False	NA	NA	NA	48500389	48500860	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_48500400_48500900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141548	chr6	+	3146	3	FSM	ENSMUSG00000052751.17	ENSMUST00000009420.15	3145	3	0	-1	0	0	multi-exon	FALSE	canonical	3	41	junction_2	5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTGGTGGTGTTCTTTT	NA	False	NA	21	True	AATAAA	-19	NA	48570816	48576016	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_48570987_48571724_48571911_48573226
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141555	chr6	+	3127	3	NNC	ENSMUSG00000052751.17	novel	3138	3	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	12.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTGGTGGTGTTCTTTT	NA	False	NA	21	True	AATAAA	-19	NA	48570832	48576016	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_+_48570987_48571724_48571911_48573229
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141575	chr6	+	2497	3	FSM	ENSMUSG00000007216.7	ENSMUST00000204095.3	4143	3	-33	1679	-33	-1679	multi-exon	FALSE	canonical	3	52	junction_2	4.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGTCACTGTTCTTTC	NA	False	NA	8	True	AATGAA	-16	NA	48578963	48598482	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_48579055_48590111_48590194_48596158
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141585	chr6	+	197	1	Intergenic	novelGene_4410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATAACAATACTCGGGA	135	False	NA	NA	False	NA	NA	NA	48977387	48977584	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_48977400_48977600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141598	chr6	+	2275	11	FSM	ENSMUSG00000029816.11	ENSMUST00000031840.10	3701	11	29	1397	-21	-1397	multi-exon	FALSE	canonical	3	59	junction_4	6.96347614342147	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTGATTATTATATTG	NA	False	NA	NA	False	ATTAAA	-16	NA	49013577	49033719	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_49013727_49019700_49019854_49020930_49021075_49022238_49022413_49024227_49024387_49024669_49025036_49027343_49027443_49027957_49028061_49028751_49028961_49032554_49032649_49033094
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141621	chr6	-	4829	15	FSM	ENSMUSG00000029814.11	ENSMUST00000031838.9	4345	15	-479	-5	-479	5	multi-exon	FALSE	canonical	3	409	junction_14	48.9016610043012	225	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGTAGTATGTTTTCA	NA	False	NA	-19	True	AATAAA	-20	NA	49192370	49062151	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141635	chr6	+	188	1	Intergenic	novelGene_4411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCCCAGGCAGATGAACA	NA	False	NA	NA	False	NA	NA	NA	49134999	49135187	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_49135000_49135200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141646	chr6	+	197	1	Intergenic	novelGene_4412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCTATAATAAATTACCAT	NA	False	NA	NA	False	NA	NA	NA	49161287	49161484	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_49161300_49161500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141657	chr6	-	2119	9	NNC	ENSMUSG00000029817.12	novel	2090	9	NA	NA	-1	3	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_7	180.182372889248	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTCTCTTTATTTGATA	4592	False	NA	-1	True	AATAAA	-18	NA	49240965	49220854	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49229730_49230043_49240771
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141664	chr6	-	2102	9	NNC	ENSMUSG00000029817.12	novel	2090	9	NA	NA	5	3	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_7	181.788983095786	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTCTCTTTATTTGATA	4598	False	NA	-1	True	AATAAA	-18	NA	49240959	49220854	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49229741_49230043_49240771
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141682	chr6	+	1488	1	Antisense	novelGene_ENSMUSG00000029817.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGCCCGTGCCGCCAGAA	NA	False	NA	NA	False	NA	NA	NA	49239475	49240963	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr6_+_49239500_49241000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141685	chr6	-	173	1	Intergenic	novelGene_4413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAGAGTTTGATAA	3245	False	NA	NA	False	NA	NA	NA	49242312	49242139	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_49242100_49242300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141702	chr6	+	204	1	Intergenic	novelGene_4414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGAAAAAGCACCTTTACC	8139	False	NA	NA	False	NA	NA	NA	49327467	49327671	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_49327500_49327700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141714	chr6	+	3200	24	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-65	5	at_least_one_novel_splicesite	TRUE	canonical	2	90	junction_1	54.4319696453353	35	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCATATTCTTTGCAAT	108	False	NA	NA	False	AATAAA	-27	NA	49372472	49446440	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49396088_49396264_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141787	chr6	+	198	1	Intergenic	novelGene_4415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATTCAAGCCTATTAAT	NA	False	NA	NA	False	NA	NA	NA	50357126	50357324	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_50357100_50357300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141796	chr6	-	1258	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	-4	1869	-4	805	multi-exon	FALSE	canonical	3	4909	junction_2	335	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGATTGTGCTTTGTT	NA	False	NA	-8	True	ATTAAA	-18	NA	50543522	50541411	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_50542366_50542471_50542649_50543395
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141809	chr6	-	1581	11	NIC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	499	junction_1	2039.79651926363	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTGTAATGCTTACACA	NA	False	NA	-18	True	AATAAA	-20	NA	51446874	51438097	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_51438414_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141831	chr6	-	2932	12	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	615	junction_1	1927.31213939119	2676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446893	51438100	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_51438414_51438899_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141839	chr6	-	1412	10	FSM	ENSMUSG00000004980.17	ENSMUST00000069949.13	1647	10	46	189	-1	0	multi-exon	FALSE	canonical	3	499	junction_1	2676.86493431088	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446828	51438100	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_51438414_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141841	chr6	-	2801	12	NNC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2093.46237780208	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446825	51438100	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_-_51438414_51438962_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141846	chr6	-	1668	12	FSM	ENSMUSG00000004980.17	ENSMUST00000090002.10	1662	12	-3	-3	-1	0	multi-exon	FALSE	canonical	3	287	junction_2	2567.02803044511	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446828	51438100	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_51438414_51438899_51439036_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141860	chr6	-	1701	13	FSM	ENSMUSG00000004980.17	ENSMUST00000203954.3	1703	13	2	0	0	0	multi-exon	FALSE	canonical	3	287	junction_2	3043.32879243911	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446825	51438100	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_51438414_51438899_51439036_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141888	chr6	-	3437	12	FSM	ENSMUSG00000004980.17	ENSMUST00000114459.8	1728	12	-70	-1639	-2	0	multi-exon	FALSE	canonical	3	874	junction_11	2433.70552759395	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446876	51438100	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141889	chr6	-	3353	11	FSM	ENSMUSG00000004980.17	ENSMUST00000203220.3	1638	11	-76	-1639	-1	0	multi-exon	FALSE	canonical	3	5712	junction_10	720.046137410652	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446828	51438100	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141894	chr6	-	3280	10	FSM	ENSMUSG00000004980.17	ENSMUST00000204188.3	1518	10	-123	-1639	-1	0	multi-exon	FALSE	canonical	3	933	junction_3	2022.94680547408	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446875	51438100	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141903	chr6	-	3571	11	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	10	0	intron_retention	FALSE	canonical	3	874	junction_10	2524.61263563344	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446854	51438100	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141904	chr6	-	3404	9	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	-16	0	intron_retention	FALSE	canonical	3	933	junction_2	2125.40431080183	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446843	51438100	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141905	chr6	-	3420	10	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	2	0	intron_retention	FALSE	canonical	3	874	junction_9	2983.31505063713	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446823	51438100	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141936	chr6	-	1627	11	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	874	junction_10	2893.40520667258	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	-14	True	AATAAA	-17	NA	51446825	51439739	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_51440235_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141966	chr6	+	1747	6	FSM	ENSMUSG00000029836.16	ENSMUST00000114446.8	1719	6	-28	0	1	0	multi-exon	FALSE	canonical	3	18	junction_1	927.333381260483	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGACTTTTTTTTGTC	NA	False	NA	-1	True	AATAAA	-19	NA	51447646	51460684	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_51447715_51448795_51448849_51452210_51452354_51455417_51455581_51458703_51458799_51459459
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141970	chr6	+	188	1	Intergenic	novelGene_4416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAAAGATGTATTTATTT	3561	False	NA	NA	False	NA	NA	NA	51481037	51481225	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_51481000_51481200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141979	chr6	+	2482	7	FSM	ENSMUSG00000038301.16	ENSMUST00000049152.15	2480	7	-2	0	-2	0	multi-exon	FALSE	canonical	3	298	junction_5	39.9433626804532	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTCGATTTCTTACTT	NA	False	NA	NA	False	ATTAAA	-24	NA	51500878	51567659	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_51501015_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000141997	chr6	+	179	1	Intergenic	novelGene_4417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATTGAAACTTAA	664	False	NA	NA	False	NA	NA	NA	51591443	51591622	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_51591400_51591600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142005	chr6	-	3393	13	FSM	ENSMUSG00000059182.9	ENSMUST00000204778.3	3382	13	-5	-6	-5	6	multi-exon	FALSE	canonical	3	457	junction_9	27.4919180043073	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGCTAATAATTCAACAG	823	False	NA	1	True	AATAAA	-24	NA	51989534	51834395	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_51836551_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142012	chr6	-	1700	13	NNC	ENSMUSG00000059182.9	novel	3382	13	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	141.475753713804	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGACTTAGCCTGGTAT	832	False	NA	-6	True	AATAAA	-19	NA	51989525	51836144	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_-_51836616_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142033	chr6	-	185	1	Intergenic	novelGene_4418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTACTCATTTTAAGTCT	NA	False	NA	NA	False	NA	NA	NA	52263687	52263502	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_52263500_52263700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142035	chr6	-	177	1	Intergenic	novelGene_4419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATAATAATCTAT	NA	False	NA	NA	False	NA	NA	NA	52321080	52320903	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_52320900_52321100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142042	chr6	+	202	1	Intergenic	novelGene_4420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATAGATTTTTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	52348642	52348844	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_52348600_52348800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142049	chr6	+	189	1	Intergenic	novelGene_4421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAAAAAGGGGAGGGGA	NA	False	NA	NA	False	NA	NA	NA	52461004	52461193	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_52461000_52461200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142071	chr6	-	180	1	Intergenic	novelGene_4422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCTGAGCAGACAGGGAC	NA	False	NA	NA	False	NA	NA	NA	52687927	52687747	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_52687700_52687900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142074	chr6	+	3291	18	FSM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	-6	0	-6	0	multi-exon	FALSE	canonical	3	527	junction_12	67.9651854701079	340	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTTTGTAAATGATTCG	NA	False	NA	NA	False	AATAAA	-27	NA	52690707	52743765	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_52690841_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142093	chr6	+	200	1	Intergenic	novelGene_4423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTATTGAGGTATTTAT	NA	False	NA	NA	False	NA	NA	NA	54021759	54021959	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_54021800_54022000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142094	chr6	-	138	1	Intergenic	novelGene_4424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTTTTAAAAAAAAAAA	NA	False	NA	-1	True	NA	NA	NA	54116577	54116439	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_54116400_54116600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142102	chr6	-	225	1	Intergenic	novelGene_4425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTCTGCGGAGGTAGA	NA	False	NA	NA	False	NA	NA	NA	54394583	54394358	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_54394400_54394600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142114	chr6	+	188	1	Intergenic	novelGene_4426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATCACATGGGCAACCCA	1388	False	NA	NA	False	NA	NA	NA	54457592	54457780	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_54457600_54457800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142124	chr6	+	194	1	Intergenic	novelGene_4427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGAAGCTGAGGCAGG	NA	False	NA	NA	False	NA	NA	NA	54560891	54561085	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_54560900_54561100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142144	chr6	+	229	1	Intergenic	novelGene_4428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTCTTTATGGGGCTGT	NA	False	NA	NA	False	TTTAAA	-1	NA	54647456	54647685	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_54647500_54647700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142158	chr6	+	224	1	Intergenic	novelGene_4429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	311	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTGTGGGATGAATTAAT	NA	False	NA	NA	False	NA	NA	NA	54696192	54696416	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_54696200_54696400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142186	chr6	+	186	1	Intergenic	novelGene_4430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATACTTGGAGGCAGGAG	NA	False	NA	NA	False	NA	NA	NA	54809792	54809978	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_54809800_54810000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142192	chr6	+	201	1	Intergenic	novelGene_4431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATCTATGGTAAAGAGAA	5140	False	NA	NA	False	NA	NA	NA	54871600	54871801	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_54871600_54871800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142202	chr6	-	182	1	Intergenic	novelGene_4432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGAGGTAATCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	55137365	55137183	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_55137200_55137400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142206	chr6	+	2690	18	FSM	ENSMUSG00000038022.12	ENSMUST00000053094.8	4270	18	38	1542	38	365	multi-exon	TRUE	canonical	1	1	junction_8	4.83570915636814	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGACTGTGGTTGGTTCA	NA	False	NA	NA	False	CATAAA	-30	NA	55180405	55295665	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_55180555_55188234_55188355_55193491_55193728_55195206_55195454_55200982_55201354_55232595_55232652_55237519_55237627_55239703_55239821_55240760_55240850_55253538_55253641_55255031_55255096_55256069_55256136_55261730_55261799_55274672_55274737_55277927_55278090_55285139_55285321_55286246_55286320_55295247
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142230	chr6	+	6845	16	NNC	ENSMUSG00000029787.11	novel	6670	16	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_7	24.9411752373905	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGGCTATTGATCTCCTA	NA	False	NA	43	True	AATAAA	-21	NA	56691914	56738897	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_+_56692200_56700460_56700582_56702060_56702147_56703235_56703308_56705172_56705263_56705581_56705649_56706704_56706924_56707626_56707666_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142236	chr6	+	182	1	Intergenic	novelGene_4433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAGCACTCAGCCACAA	5544	False	NA	NA	False	NA	NA	NA	56720554	56720736	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_56720600_56720700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142243	chr6	-	3831	4	FSM	ENSMUSG00000059486.12	ENSMUST00000114323.8	3816	4	-15	0	-15	0	multi-exon	FALSE	canonical	3	176	junction_3	4.02768199119819	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTGGTTTTTTGGTTTT	9688	False	NA	0	True	AATAAA	-17	NA	56774736	56754508	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_56757399_56758785_56758952_56766203_56766686_56774443
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142263	chr6	+	2996	10	FSM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	13	0	13	0	multi-exon	FALSE	canonical	3	670	junction_6	57.9369602069757	224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTGGCTTTATGGTATT	NA	False	NA	36	True	CATAAA	-14	NA	56809056	56856343	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_56809413_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845892_56850351_56850498_56852653_56852818_56855018
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142270	chr6	-	1655	9	FSM	ENSMUSG00000029780.15	ENSMUST00000031793.8	1676	9	21	0	-21	0	multi-exon	FALSE	canonical	3	204	junction_8	16.5486970786222	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTGTCCAGATCATAT	1225	False	NA	0	True	AATAAA	-26	NA	56900896	56859384	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_56860044_56860659_56860861_56861693_56861857_56863648_56863739_56865307_56865394_56866447_56866495_56868476_56868547_56869774_56869874_56900656
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142277	chr6	-	193	1	Intergenic	novelGene_4434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTTAAAAAGTATCAAAAC	NA	False	NA	-10	True	NA	NA	NA	57513496	57513303	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_57513300_57513500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142293	chr6	+	3088	9	FSM	ENSMUSG00000062190.13	ENSMUST00000050077.15	2509	9	385	-964	-66	7	multi-exon	TRUE	canonical	3	58	junction_1	7.80924932371864	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTCTTAATATTTTCTC	NA	False	NA	15	True	AATAAA	-25	NA	57680005	57716431	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_57680249_57689972_57690091_57699481_57699690_57700473_57700622_57701530_57701678_57703401_57703585_57709180_57709358_57711001_57711075_57714640
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142317	chr6	+	2166	16	FSM	ENSMUSG00000029802.14	ENSMUST00000114294.8	2178	16	-48	60	-30	-60	multi-exon	FALSE	canonical	3	106	junction_1	24.9849732617205	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTGTTCTTTTCTTCAC	NA	False	NA	16	True	ATTAAA	-23	NA	58617500	58669436	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_58617613_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142342	chr6	+	2978	2	FSM	ENSMUSG00000049232.4	ENSMUST00000062626.4	3007	2	29	0	29	0	multi-exon	FALSE	canonical	3	130	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGATGACTTTTTCTGAA	NA	False	NA	9	True	NA	NA	NA	59185883	59189018	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_59186167_59186323
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142349	chr6	+	190	1	Intergenic	novelGene_4435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCGGGTCCTTGGTGCCTC	NA	False	NA	NA	False	NA	NA	NA	59338438	59338628	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_59338400_59338600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142356	chr6	-	218	1	Intergenic	novelGene_4436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAAACTTATTGTATACT	NA	False	NA	NA	False	NA	NA	NA	60284710	60284492	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_60284500_60284700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142361	chr6	+	210	1	Intergenic	novelGene_4437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGTAGTATTATTAAATAT	NA	False	NA	NA	False	NA	NA	NA	64524971	64525181	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_64525000_64525200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142369	chr6	+	221	1	Intergenic	novelGene_4438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	334	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTAAGTTTTTTTCG	NA	False	NA	67	True	NA	NA	NA	64977842	64978063	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_64977800_64978100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142375	chr6	+	257	1	Intergenic	novelGene_4439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGTCATCTTTTATGTA	NA	False	NA	NA	False	NA	NA	NA	64981872	64982129	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_64981900_64982100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142385	chr6	-	202	1	Intergenic	novelGene_4440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATAATCAAAGATTTGAGT	8899	False	NA	NA	False	TTTAAA	-1	NA	65013848	65013646	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_65013600_65013800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142402	chr6	+	711	3	FSM	ENSMUSG00000029920.10	ENSMUST00000205118.3	600	3	-39	-72	7	0	multi-exon	FALSE	canonical	3	133	junction_2	73	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGCAGAGCATTATGGA	1746	False	NA	5	True	AATAAA	-15	NA	65019611	65021187	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_65019715_65020189_65020430_65020819
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142409	chr6	+	4951	24	FSM	ENSMUSG00000029920.10	ENSMUST00000031984.9	5168	24	206	11	-21	-11	multi-exon	FALSE	canonical	3	261	junction_1	41.9367603834104	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTCACACCCTTTG	1933	False	NA	17	True	AATAAA	-19	NA	65019798	65093034	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142437	chr6	+	1834	5	FSM	ENSMUSG00000029910.15	ENSMUST00000101343.2	1725	5	-67	-42	11	13	multi-exon	FALSE	canonical	3	834	junction_4	68.2692280606717	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGTGTTTTAAATTTGT	NA	False	NA	-47	True	TATAAA	-38	NA	66512384	66518017	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142439	chr6	+	1353	6	FSM	ENSMUSG00000029910.15	ENSMUST00000116605.8	7557	6	13	6191	13	9	multi-exon	FALSE	canonical	3	769	junction_5	83.3273064487266	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGCCTTGTGTTTTAAAT	NA	False	NA	-51	True	TATAAA	-34	NA	66512386	66518013	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754_66516935_66517409
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142477	chr6	+	222	1	Intergenic	novelGene_4441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAACATCTCTTTAAAAA	4842	False	NA	NA	False	TTTAAA	-2	NA	66940711	66940933	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_66940700_66940900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142489	chr6	-	1220	4	FSM	ENSMUSG00000036390.9	ENSMUST00000043098.9	1223	4	-1	4	-1	-4	multi-exon	FALSE	canonical	3	118	junction_1	3.77123616632825	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATTTCTCAACGTG	NA	False	NA	-11	True	AATAAA	-15	NA	67014391	67012083	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_67012757_67013661_67013900_67013993_67014096_67014184
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142494	chr6	+	211	1	Intergenic	novelGene_4442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAACAACGACTGTATA	3084	False	NA	NA	False	NA	NA	NA	67149341	67149552	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_67149300_67149600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142501	chr6	+	182	1	Intergenic	novelGene_4443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAAAGGAACTGAGATCA	NA	False	NA	NA	False	NA	NA	NA	67183907	67184089	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_67183900_67184100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142516	chr6	+	4463	8	FSM	ENSMUSG00000036371.7	ENSMUST00000204293.3	1336	8	-52	-3075	-25	2811	multi-exon	FALSE	canonical	3	2743	junction_3	1435.93298973887	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCATTAAATCCTGCTAC	5819	False	NA	NA	False	AATAAA	-17	NA	67243941	67264106	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142519	chr6	+	3824	8	FSM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	334	11316	-25	2109	multi-exon	FALSE	canonical	3	2187	junction_4	1676.62542517001	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACTGAGTTTGCAAGTGG	5819	False	NA	6	True	AATAGA	-11	NA	67243941	67263404	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142528	chr6	+	3794	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	-52	-2125	-24	2125	multi-exon	FALSE	canonical	3	3189	junction_3	1320.70455841276	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGTGTAAGTATTTTGT	5820	False	NA	22	True	AATAGA	-27	NA	67243942	67263420	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142558	chr6	+	4520	17	FSM	ENSMUSG00000031668.15	ENSMUST00000034093.15	4513	17	-7	0	-7	0	multi-exon	FALSE	canonical	3	52	junction_8	9.41408519188137	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTGACTCTTATTTTAGA	NA	False	NA	NA	False	AATAAA	-22	NA	70821491	70882229	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_70822006_70835370_70835501_70853661_70853857_70855818_70855953_70858467_70858703_70859248_70859412_70860578_70860720_70861753_70861877_70862144_70862366_70864783_70864897_70866458_70866582_70867048_70867199_70869338_70870126_70873899_70874068_70877215_70877318_70878388_70878452_70881071
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142566	chr6	+	180	1	Intergenic	novelGene_4444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAGGACAAACAAA	1859	False	NA	NA	False	NA	NA	NA	70967788	70967968	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_70967800_70968000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142576	chr6	+	479	1	FSM	ENSMUSG00000068396.10	ENSMUST00000121998.2	354	1	-33	-92	-33	92	mono-exon	FALSE	NA	NA	NA	NA	NA	384	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTCCAGAACAATGAAAGAG	NA	False	NA	NA	False	NA	NA	NA	71101560	71102039	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_71101600_71102000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142589	chr6	+	1670	3	FSM	ENSMUSG00000053012.18	ENSMUST00000204436.3	1687	3	21	-4	-3	4	multi-exon	FALSE	canonical	3	170	junction_2	14.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTGTCAGTGCTCTGT	NA	False	NA	10	True	AATAAA	-22	NA	71248681	71262307	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_71248825_71259134_71259302_71260947
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142593	chr6	+	2918	2	FSM	ENSMUSG00000073018.7	ENSMUST00000114185.4	2874	2	-43	-1	-43	1	multi-exon	FALSE	canonical	3	49	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTGTGATGTGATTT	NA	False	NA	12	True	NA	NA	NA	71270705	71279865	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_71270843_71277084
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142606	chr6	-	6163	9	FSM	ENSMUSG00000002222.15	ENSMUST00000002292.15	6165	9	-2	4	-2	-4	multi-exon	FALSE	canonical	3	172	junction_4	25.5828922328966	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTGTGGATCCAGTTT	NA	False	NA	-4	True	ATTAAA	-21	NA	71417623	71365621	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71416981
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142625	chr6	+	821	1	Intergenic	novelGene_4445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAGAAGAAACACATTCCA	2462	False	NA	NA	False	NA	NA	NA	71379771	71380592	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_71379800_71380600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142626	chr6	+	207	1	Intergenic	novelGene_4446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCAACCCTTCTGCAGTA	NA	False	NA	NA	False	AAAACA	-6	NA	71387773	71387980	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_71387800_71388000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142639	chr6	+	2606	6	FSM	ENSMUSG00000053119.12	ENSMUST00000059462.12	2654	6	55	-7	0	7	multi-exon	FALSE	canonical	3	336	junction_5	32.5490399243972	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGCCTTTGGTGTTTA	NA	False	NA	30	True	NA	NA	NA	71520835	71558570	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_71521018_71529382_71529444_71537880_71538061_71551098_71551221_71554714_71554830_71556624
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142650	chr6	-	234	1	Intergenic	novelGene_4447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATAGATTCCTAAAGCAG	NA	False	NA	NA	False	TTTAAA	-4	NA	71541104	71540870	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_71540900_71541100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142665	chr6	-	4805	27	FSM	ENSMUSG00000053470.14	ENSMUST00000065509.11	4816	27	-55	66	30	-1	multi-exon	TRUE	canonical	3	176	junction_18	110.285703472991	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGCTGTTCTTTGTCCTT	NA	False	NA	-18	True	ATTAAA	-18	NA	71609944	71566021	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142686	chr6	-	181	1	Intergenic	novelGene_4448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTCAAAACTAATCTATAG	NA	False	NA	NA	False	NA	NA	NA	71582060	71581879	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_71581900_71582100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142693	chr6	+	202	1	Intergenic	novelGene_4449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTACTATGTAAGCTTTGC	NA	False	NA	NA	False	NA	NA	NA	71582309	71582511	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_71582300_71582500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142700	chr6	+	3653	7	FSM	ENSMUSG00000052852.9	ENSMUST00000121469.2	3924	7	271	0	-38	0	multi-exon	FALSE	canonical	3	27	junction_1	4.12310562561766	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTAATGTTGGGCTAAT	1546	False	NA	NA	False	AATAAA	-27	NA	71684815	71787694	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_71684986_71733347_71733421_71738348_71738426_71750171_71750293_71757705_71757820_71772130_71772309_71784774
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142725	chr6	+	2745	15	FSM	ENSMUSG00000052337.16	ENSMUST00000101301.10	2299	15	-110	-336	-28	9	multi-exon	TRUE	canonical	3	438	junction_4	278.631248156016	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTTTCAAAGCTGCCAT	NA	False	NA	21	True	AATAAA	-28	NA	71808286	71852250	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142761	chr6	+	2694	14	NIC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_10	424.422768463866	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTACTCTATCCCTTTT	NA	False	NA	9	True	AATAAA	-16	NA	71808343	71852238	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71845563_71845788_71848410_71848543_71849777_71849908_71851300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142772	chr6	+	2574	14	NIC	ENSMUSG00000052337.16	novel	2299	15	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	3	109	junction_5	436.803951799537	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTCTATCCCTTTTCAAA	NA	False	NA	13	True	AATAAA	-20	NA	71808353	71852242	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142786	chr6	-	2547	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	140	junction_10	186.019177230523	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTAAGCGTGTACAT	3033	False	NA	-1	True	AATAAA	-28	NA	71885749	71857621	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142790	chr6	-	2601	24	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	3	774	junction_16	87.5050309112717	469	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTAAGCGTGTACAT	3030	False	NA	-1	True	AATAAA	-28	NA	71885752	71857621	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142814	chr6	+	6116	34	FSM	ENSMUSG00000049553.12	ENSMUST00000055296.11	9216	34	-9	3109	-1	-3109	multi-exon	FALSE	canonical	3	275	junction_3	38.128991835157	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGTTTTTAATCTTTCC	NA	False	NA	26	True	AATAAA	-36	NA	71886035	71956350	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142821	chr6	+	3220	20	ISM	ENSMUSG00000049553.12	ENSMUST00000055296.11	9216	34	-5	27424	3	16	5prime_fragment	FALSE	canonical	3	275	junction_3	22.8414989005135	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGTGTTGGCTCATG	NA	False	NA	NA	False	AGTAAA	-14	NA	71886039	71932035	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142836	chr6	+	192	1	Intergenic	novelGene_4450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACACAGGTGTGTCTTAGT	8912	False	NA	NA	False	NA	NA	NA	72171733	72171925	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_72171700_72171900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142846	chr6	-	2179	13	FSM	ENSMUSG00000056305.5	ENSMUST00000070345.5	2244	13	-21	86	-21	-86	multi-exon	FALSE	canonical	3	571	junction_6	46.7748745470139	529	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGTTTCATATACCCCA	NA	False	NA	-19	True	ATTAAA	-24	NA	72322188	72295746	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_72296223_72296722_72296810_72298238_72298375_72302628_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375_72315513_72316949_72317045_72319881_72319952_72321867
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142867	chr6	+	4613	4	FSM	ENSMUSG00000058706.6	ENSMUST00000077783.5	4605	4	-8	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	6.54896090146283	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTGCCAAAAGTTGTG	8318	False	NA	15	True	AATAAA	-15	NA	72324308	72330131	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_72324499_72324575_72324695_72325511_72325664_72325979
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142877	chr6	+	1519	8	FSM	ENSMUSG00000055912.9	ENSMUST00000069695.9	1546	8	27	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	17.1583263538524	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGTGTTCTGGAGAAT	NA	False	NA	10	True	ATTAAA	-21	NA	72332456	72336745	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_72332528_72333113_72333296_72333704_72333753_72334032_72334120_72334931_72335000_72335290_72335419_72335561_72335740_72335988
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142882	chr6	-	1429	5	FSM	ENSMUSG00000055850.13	ENSMUST00000069580.12	1434	5	6	-1	2	1	multi-exon	FALSE	canonical	3	875	junction_2	66.4266512779321	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGTGGTTCTGCTGTGTT	8414	False	NA	NA	False	TATAAA	-16	NA	72339409	72336695	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_72337626_72337857_72337933_72338099_72338210_72338394_72338523_72339223
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142892	chr6	-	1387	5	NNC	ENSMUSG00000055850.13	novel	1434	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_1	389.700205286063	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGGTTCTGCTGTGT	8447	False	NA	NA	False	TATAAA	-15	NA	72339376	72336696	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_-_72337618_72337857_72337933_72338099_72338210_72338394_72338523_72339223
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142896	chr6	-	1360	5	NIC	ENSMUSG00000055850.13	novel	1434	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_4	391.378652969219	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGGTTCTGCTGTGT	8447	False	NA	NA	False	TATAAA	-15	NA	72339376	72336696	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_72337626_72337857_72337933_72338099_72338210_72338394_72338523_72339258
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142904	chr6	-	1627	4	NIC	ENSMUSG00000055850.13	novel	1434	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	875	junction_1	75.1546553596131	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGGTTCTGCTGTGT	8447	False	NA	NA	False	TATAAA	-15	NA	72339376	72336696	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_72337933_72338099_72338210_72338394_72338523_72339223
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142919	chr6	+	196	1	Intergenic	novelGene_4451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAACCAAACAAACCCCCA	6407	False	NA	NA	False	NA	NA	NA	72373497	72373693	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_72373500_72373700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142931	chr6	-	2897	9	FSM	ENSMUSG00000053907.11	ENSMUST00000059472.10	2804	9	-1	-92	-1	92	multi-exon	FALSE	canonical	3	591	junction_1	84.6271233116192	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACGATAAAAGCTTAGTGA	NA	False	NA	81	True	AATAAA	-15	NA	72416542	72409689	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_72411379_72411963_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142946	chr6	-	3393	8	FSM	ENSMUSG00000053907.11	ENSMUST00000205335.2	3387	8	-3	-3	-1	3	multi-exon	FALSE	canonical	3	761	junction_3	40.6724095420862	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTATTACTTGTCCA	NA	False	NA	-8	True	AATAAA	-20	NA	72416542	72409778	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142955	chr6	-	3483	7	NIC	ENSMUSG00000053907.11	novel	2804	9	NA	NA	0	3	intron_retention	FALSE	canonical	3	761	junction_2	39.7481655761202	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTATTACTTGTCCA	NA	False	NA	-8	True	AATAAA	-20	NA	72416541	72409778	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000142984	chr6	+	1997	11	FSM	ENSMUSG00000056666.14	ENSMUST00000070597.13	3027	11	96	934	-57	49	multi-exon	FALSE	canonical	3	404	junction_1	54.9894535342915	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTGTTAAGTCAAGAGTT	NA	False	NA	20	True	TATAAA	-25	NA	72575553	72584474	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_72575780_72577955_72578139_72578458_72578701_72579637_72579840_72580636_72580835_72581848_72581969_72582954_72583094_72583367_72583478_72583555_72583723_72583856_72584017_72584224
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143005	chr6	+	202	1	Intergenic	novelGene_4452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTAGGCTGGAGATAG	NA	False	NA	NA	False	NA	NA	NA	72589728	72589930	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_72589700_72589900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143013	chr6	-	3071	13	FSM	ENSMUSG00000055799.14	ENSMUST00000114053.9	1888	13	-282	-901	20	7	multi-exon	FALSE	canonical	3	158	junction_8	90.8812946772999	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGATGTTTCTTTAGGCC	4843	False	NA	-1	True	AATAAA	-21	NA	72766217	72603353	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938_72609080_72609909_72609994_72610198_72610302_72611082_72611216_72625783_72625826_72626102_72626187_72765193_72765322_72765544_72765609_72765692
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143033	chr6	+	183	1	Intergenic	novelGene_4453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGAAGGAAGGAAGGGAG	6912	False	NA	NA	False	NA	NA	NA	72643288	72643471	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_72643300_72643500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143036	chr6	+	191	1	Intergenic	novelGene_4454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAAAGGGGACTA	NA	False	NA	NA	False	NA	NA	NA	72692657	72692848	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_72692700_72692800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143048	chr6	+	223	1	Intergenic	novelGene_4455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTCTCTCTCTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	72791064	72791287	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_72791100_72791300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143057	chr6	+	187	1	Intergenic	novelGene_4456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTTTTAAATGCACAGG	NA	False	NA	NA	False	NA	NA	NA	72822776	72822963	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_72822800_72823000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143065	chr6	-	221	1	Intergenic	novelGene_4457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATAACCTCATGTTCTAA	NA	False	NA	0	True	AAAACA	-25	NA	72888012	72887791	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_72887800_72888000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143071	chr6	-	176	1	Intergenic	novelGene_4458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATAAATAATTCTTTTAA	5997	False	NA	NA	False	NA	NA	NA	72894176	72894000	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_72894000_72894200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143082	chr6	-	508	3	FSM	ENSMUSG00000079523.9	ENSMUST00000114050.8	570	3	62	0	-27	0	multi-exon	FALSE	canonical	3	26814	junction_1	200.5	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGTGGTCTGAATTTTTTA	NA	False	NA	-11	True	AATAAA	-20	NA	72935409	72934329	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_72934636_72934895_72935008_72935319
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143096	chr6	-	737	2	FSM	ENSMUSG00000079523.9	ENSMUST00000144337.2	433	2	-1	-303	-1	1	multi-exon	FALSE	canonical	3	27215	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGGCGTGGTCTGAATT	NA	False	NA	-16	True	AATAAA	-15	NA	72935383	72934334	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_72935008_72935319
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143101	chr6	-	1048	1	NIC	ENSMUSG00000079523.9	novel	570	3	NA	NA	0	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGGCGTGGTCTGAATT	NA	False	NA	-16	True	AATAAA	-15	NA	72935382	72934334	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_72934300_72935400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143108	chr6	+	1268	9	FSM	ENSMUSG00000052738.15	ENSMUST00000064740.9	1519	9	247	4	-23	3	multi-exon	FALSE	canonical	3	1222	junction_2	134.074081667562	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTGTGAAGACTTTTT	2562	False	NA	15	True	AATAAA	-19	NA	73225611	73253890	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_73225737_73233153_73233258_73237457_73237575_73240790_73241004_73241212_73241271_73246297_73246382_73247953_73248106_73252183_73252373_73253664
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143115	chr6	+	205	1	Genic_Genomic	ENSMUSG00000052738.15	novel	NA	NA	NA	NA	2503	16	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAACACTCCACTTAGGCA	NA	False	NA	NA	False	NA	NA	NA	73239845	73240050	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr6_+_73239800_73240000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143121	chr6	+	199	1	Intergenic	novelGene_4459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTGTCTTTCTTATAT	NA	False	NA	NA	False	AAAAAG	-6	NA	75862844	75863043	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_75862800_75863000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143128	chr6	+	192	1	Intergenic	novelGene_4460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGACACAAGCTTGGTT	NA	False	NA	NA	False	NA	NA	NA	77352610	77352802	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_77352600_77352800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143132	chr6	+	172	1	Intergenic	novelGene_4461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACTGAAAACTGAGCCT	NA	False	NA	NA	False	NA	NA	NA	81202823	81202995	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_81202800_81203000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143150	chr6	-	1387	5	FSM	ENSMUSG00000030045.11	ENSMUST00000032124.9	5000	5	12	3601	12	522	multi-exon	FALSE	canonical	3	603	junction_3	40.9839907768875	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTCTGCATGTCAGTTT	NA	False	NA	NA	False	ATTAAA	-31	NA	81942927	81938432	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143174	chr6	-	917	4	NNC	ENSMUSG00000030042.16	novel	1769	4	NA	NA	16631	34	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_3	429.604727886254	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTGTGTTGCTCAGT	NA	False	NA	-2	True	NA	NA	NA	82665715	82624262	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_-_82625018_82628417_82628460_82629063_82629149_82665680
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143181	chr6	-	406	1	Genic_Genomic	ENSMUSG00000000628.11	novel	NA	NA	NA	NA	881	2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGTGTGATTGGATCT	2960	False	NA	1	True	AATAAA	-25	NA	82702409	82702003	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr6_-_82702000_82702400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143189	chr6	-	5549	18	FSM	ENSMUSG00000000628.11	ENSMUST00000000642.11	5513	18	-34	-2	-34	2	multi-exon	FALSE	canonical	3	435	junction_14	56.0328005768445	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGTGTGATTGGATCT	9364	False	NA	1	True	AATAAA	-25	NA	82751469	82702003	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_82704436_82705692_82705927_82706525_82706682_82707748_82707933_82708028_82708129_82709081_82709178_82711828_82711949_82712227_82712377_82713510_82713816_82715267_82715502_82716499_82716656_82719783_82719968_82720248_82720349_82720925_82721022_82721842_82721963_82726169_82726319_82737084_82737248_82750898
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143220	chr6	+	3527	9	NIC	ENSMUSG00000030041.10	novel	1945	10	NA	NA	20	0	intron_retention	FALSE	canonical	0	0	junction_7	186.808683885413	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTGTTCAGAGCATTCC	NA	False	NA	12	True	ATTAAA	-17	NA	82923902	83007164	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_+_82923934_82933389_82933688_82944947_82945134_82958796_82958966_82980710_82982650_82983298_82983441_83003178_83003386_83005372_83005514_83006750
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143223	chr6	+	1783	9	NIC	ENSMUSG00000030041.10	novel	1945	10	NA	NA	20	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	187.231641289607	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTGTTCAGAGCATTC	NA	False	NA	11	True	ATTAAA	-16	NA	82923902	83007163	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_+_82923934_82933389_82933688_82944947_82945134_82958796_82958966_82980710_82980885_82982486_82982650_82983298_82983441_83003178_83003386_83006750
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143233	chr6	-	1799	5	FSM	ENSMUSG00000068335.7	ENSMUST00000089651.6	1807	5	8	0	5	0	multi-exon	FALSE	canonical	3	30	junction_1	5.31507290636732	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTCTGCGTATGAATGAG	NA	False	NA	-4	True	ATTAAA	-19	NA	83010444	83007914	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_83009042_83009211_83009397_83009515_83009610_83009747_83010048_83010351
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143269	chr6	+	1366	12	NNC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_3	317.12207936872	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGTTGCCTCTTTGG	5421	False	NA	9	True	ATTAAA	-19	NA	83031709	83034663	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_+_83031814_83031891_83032030_83032109_83032192_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143271	chr6	+	1400	12	NIC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	307.048519599802	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGTTGCCTCTTTGG	5421	False	NA	9	True	ATTAAA	-19	NA	83031709	83034663	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_+_83031814_83031891_83031995_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143275	chr6	+	1661	11	NIC	ENSMUSG00000068328.11	novel	1265	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	960	junction_9	76.9269783626005	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGTTGCCTCTTTGG	5421	False	NA	9	True	ATTAAA	-19	NA	83031709	83034663	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_+_83031814_83031891_83032030_83032109_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143285	chr6	+	2952	1	FSM	ENSMUSG00000068328.11	ENSMUST00000204385.2	1627	1	2	-1327	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGTTGCCTCTTTGG	5423	False	NA	9	True	ATTAAA	-19	NA	83031711	83034663	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_83031700_83034700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143292	chr6	+	184	1	ISM	ENSMUSG00000009145.7	ENSMUST00000077502.5	3257	12	9007	284	8754	-284	mono-exon	FALSE	NA	NA	NA	NA	NA	1813	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTGGTT	4552	False	NA	30	True	NA	NA	NA	83043831	83044015	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr6_+_83043800_83044000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143302	chr6	-	2312	3	FSM	ENSMUSG00000068327.6	ENSMUST00000089641.6	1236	3	-807	-269	-807	2	multi-exon	FALSE	canonical	3	90	junction_1	3	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGTCTCCAGTTGTCTC	6369	False	NA	-4	True	AAAACA	-22	NA	83048081	83045302	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_83045956_83046034_83046273_83046660
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143320	chr6	+	186	1	Intergenic	novelGene_4462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGCTTATTTTATTTTG	NA	False	NA	NA	False	NA	NA	NA	83074150	83074336	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_83074200_83074300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143324	chr6	+	653	3	FSM	ENSMUSG00000030037.10	ENSMUST00000113938.5	695	3	42	0	-38	0	multi-exon	FALSE	canonical	3	747	junction_2	17.5	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTATTTTTCTCAGGTTGT	7425	False	NA	NA	False	ATTAAA	-19	NA	83086062	83086920	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_83086185_83086294_83086408_83086502
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143335	chr6	+	2796	4	FSM	ENSMUSG00000030036.9	ENSMUST00000032114.8	2780	4	-12	-4	-12	4	multi-exon	FALSE	canonical	3	308	junction_2	15.1070255914995	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTGCTTTAGACAGTTT	5161	False	NA	32	True	AATAAA	-21	NA	83092464	83095883	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_83092908_83092999_83093230_83093608_83093806_83093957
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143344	chr6	+	2546	3	NIC	ENSMUSG00000030036.9	novel	2780	4	NA	NA	5	1	combination_of_known_splicesites	FALSE	canonical	3	39	junction_1	153	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCCCTTGCTTTAGACAG	5178	False	NA	29	True	AATAAA	-18	NA	83092481	83095880	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_+_83092908_83093608_83093806_83093957
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143350	chr6	-	1297	5	FSM	ENSMUSG00000030035.15	ENSMUST00000032111.11	1419	5	121	1	-32	0	multi-exon	FALSE	canonical	3	121	junction_4	18.4390889145858	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGATTCTGGGTAGA	NA	False	NA	-8	True	ATTAAA	-16	NA	83098419	83096025	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_83096702_83096848_83097026_83097165_83097269_83097752_83097858_83098183
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143399	chr6	+	3123	12	ISM	ENSMUSG00000068323.13	ENSMUST00000039212.8	5123	25	39984	-1	-34	0	3prime_fragment	FALSE	canonical	3	368	junction_2	56.2057907078168	265	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCCATGTCTAATAACTGAG	5692	False	NA	25	True	AATAAA	-26	NA	83254340	83281927	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143432	chr6	-	2100	8	FSM	ENSMUSG00000005667.9	ENSMUST00000005810.9	2085	8	-15	0	-15	0	multi-exon	FALSE	canonical	3	2400	junction_5	123.349677166756	1706	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTTGTCTCAGTCAGAC	NA	False	NA	2	True	AATAAA	-35	NA	83294603	83282672	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83288917_83290343_83290529_83294410
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143452	chr6	+	4299	6	NNC	ENSMUSG00000043131.15	novel	4412	6	NA	NA	10	-79	intron_retention	FALSE	canonical	3	32	junction_1	112.474708268126	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTTGAAGTGTGTTAAC	NA	False	NA	18	True	AATAAA	-19	NA	83303027	83320678	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_+_83303250_83306851_83307016_83309435_83309530_83311057_83311192_83315262_83315427_83317157
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143463	chr6	+	555	4	FSM	ENSMUSG00000045160.15	ENSMUST00000136501.2	2312	4	21	1736	21	4	multi-exon	FALSE	canonical	3	755	junction_1	124.478467571259	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCATGCTTCAGGTGCC	370	False	NA	30	True	ATTAAA	-30	NA	83326448	83335382	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_83326537_83328247_83328372_83330023_83330113_83335128
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143477	chr6	-	1043	7	FSM	ENSMUSG00000014554.14	ENSMUST00000014698.10	1107	7	64	0	2	0	multi-exon	FALSE	canonical	3	197	junction_5	13.5369863706809	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTGTTCGTTTATTTC	NA	False	NA	-3	True	AATAAA	-23	NA	83483887	83457198	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_83457419_83457824_83457925_83458328_83458445_83463965_83464114_83467402_83467591_83473667_83473781_83483729
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143495	chr6	+	1308	3	FSM	ENSMUSG00000034777.3	ENSMUST00000037807.3	1242	3	-66	0	-66	0	multi-exon	FALSE	canonical	3	115	junction_1	5	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTCTGTCCCTGTTCT	NA	False	NA	21	True	AATAAA	-32	NA	83688179	83715295	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_83688526_83710080_83710269_83714521
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143512	chr6	-	2997	6	FSM	ENSMUSG00000014748.14	ENSMUST00000014892.8	2984	6	-9	-4	-9	4	multi-exon	FALSE	canonical	3	526	junction_1	47.9474712576169	329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTAGTGTGTGACCAGGG	9703	False	NA	0	True	NA	NA	NA	83752804	83745862	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_83748286_83748428_83748532_83749223_83749292_83750691_83750846_83751999_83752080_83752635
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143516	chr6	+	1221	10	FSM	ENSMUSG00000034744.14	ENSMUST00000037376.14	1405	10	184	0	5	0	multi-exon	FALSE	canonical	3	202	junction_1	21.8281729836116	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTGTCATCTTCCATA	9442	False	NA	13	True	AATAAA	-21	NA	83772147	83779538	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_83772265_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143531	chr6	-	3329	5	FSM	ENSMUSG00000045896.15	ENSMUST00000058383.9	3982	5	-4	657	-4	-657	multi-exon	FALSE	canonical	3	74	junction_4	4.71036092035419	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCCAGGTTATTGTTA	NA	False	NA	NA	False	AATAAA	-22	NA	83808727	83783039	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_83785875_83786880_83787058_83791703_83791852_83808252_83808311_83808616
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143540	chr6	-	186	1	Intergenic	novelGene_4463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTTGTGGTTGGTCAT	6291	False	NA	NA	False	NA	NA	NA	83825452	83825266	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_83825300_83825500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143547	chr6	-	204	1	Intergenic	novelGene_4464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATATATAAAACAACAGAC	9830	False	NA	NA	False	AATAAA	-21	NA	83835292	83835088	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_83835100_83835300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143552	chr6	+	193	1	Intergenic	novelGene_4465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGACATGGTGGCCCAGA	1085	False	NA	NA	False	NA	NA	NA	83842731	83842924	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_83842700_83842900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143557	chr6	-	179	1	Intergenic	novelGene_4466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAATAAGTAAACCT	1579	False	NA	NA	False	NA	NA	NA	83843543	83843364	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_83843400_83843500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143565	chr6	+	223	1	Intergenic	novelGene_4467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	214	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTATGCTGCTGCTTTC	3507	False	NA	54	True	NA	NA	NA	83870927	83871150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_83870900_83871200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143577	chr6	+	6453	28	FSM	ENSMUSG00000030016.15	ENSMUST00000032088.14	6199	28	-32	-222	-7	0	multi-exon	FALSE	canonical	3	109	junction_24	71.435679050644	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891341	83963853	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143580	chr6	+	6351	27	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	162	junction_24	66.2109436064344	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891341	83963853	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143623	chr6	-	186	1	Intergenic	novelGene_4468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAATTTGTAACAAATTCA	3640	False	NA	NA	False	NA	NA	NA	83903525	83903339	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_83903300_83903500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143653	chr6	-	200	1	Intergenic	novelGene_4469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACATTCATATGTGTATG	NA	False	NA	NA	False	ATTAAA	-6	NA	85044007	85043807	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_85043800_85044000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143659	chr6	-	1238	3	FSM	ENSMUSG00000033735.10	ENSMUST00000045986.8	1230	3	-8	0	-8	0	multi-exon	FALSE	canonical	3	345	junction_2	5	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGAGTGTGCGTTGTCCTTC	7974	False	NA	NA	False	AATACA	-21	NA	85114756	85110659	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_85111271_85113804_85114096_85114420
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143677	chr6	+	2518	13	FSM	ENSMUSG00000033706.14	ENSMUST00000045693.8	2486	13	-24	-8	-24	8	multi-exon	FALSE	canonical	3	411	junction_7	60.725246442938	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGTGGGGCGTGGGCT	NA	False	NA	36	True	AATAAA	-30	NA	85408946	85423425	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85417727_85418541_85418605_85418719_85418791_85419092_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143684	chr6	+	2788	12	NIC	ENSMUSG00000033706.14	novel	2486	13	NA	NA	-6	-6	intron_retention	FALSE	canonical	3	411	junction_7	62.0754006986731	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTTTGCAACAATGCCTT	NA	False	NA	22	True	AATAAA	-16	NA	85408964	85423411	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85417727_85418541_85418605_85418719_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143694	chr6	-	1029	5	FSM	ENSMUSG00000030008.10	ENSMUST00000032080.9	1038	5	9	0	9	0	multi-exon	FALSE	canonical	3	116	junction_4	18.9786063766547	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTTTGTGCCTGTGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	85428256	85423791	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_85424280_85424502_85424671_85424917_85425028_85425472_85425574_85428094
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143719	chr6	-	176	1	Intergenic	novelGene_4470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAATTGCATCCTGC	7149	False	NA	NA	False	NA	NA	NA	85755339	85755163	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_85755200_85755300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143730	chr6	+	1544	1	FSM	ENSMUSG00000040078.10	ENSMUST00000160012.2	480	1	-118	-946	-118	946	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGAGAGGGGGAGGGGGG	NA	False	NA	NA	False	NA	NA	NA	85820843	85822387	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_85820800_85822400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143735	chr6	+	2130	6	FSM	ENSMUSG00000054226.14	ENSMUST00000067137.14	2103	6	-25	-2	3	0	multi-exon	FALSE	canonical	3	153	junction_1	21.35790251874	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTTATTATGTC	3393	False	NA	24	True	NA	NA	NA	85892703	85907266	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_85892773_85898404_85898494_85901341_85901505_85904222_85904346_85904789_85904967_85905757
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143757	chr6	-	6432	9	FSM	ENSMUSG00000030002.16	ENSMUST00000032071.13	6435	9	3	0	3	0	multi-exon	FALSE	canonical	3	240	junction_7	14.8070928949608	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGTACTATCTTGTATT	7323	False	NA	2	True	NA	NA	NA	85938646	85919249	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85930477_85935565_85935698_85936197_85936274_85938419
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143767	chr6	+	185	1	Intergenic	novelGene_4471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTTTAAGAAGAGAGAATT	NA	False	NA	NA	False	NA	NA	NA	85948992	85949177	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_85949000_85949200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143774	chr6	+	192	1	Intergenic	novelGene_4472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAGAAAAGCAATGGC	NA	False	NA	10	True	NA	NA	NA	86304188	86304380	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_86304200_86304400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143777	chr6	+	315	1	FSM	ENSMUSG00000072940.6	ENSMUST00000119024.2	210	1	-20	-85	-20	85	mono-exon	FALSE	NA	NA	NA	NA	NA	574	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGTAAATACACGTTACT	NA	False	NA	NA	False	AATAAA	-21	NA	86310992	86311307	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_86311000_86311300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143786	chr6	+	1656	3	FSM	ENSMUSG00000057497.9	ENSMUST00000071492.9	1643	3	-7	-6	-7	6	multi-exon	FALSE	canonical	3	1740	junction_2	62	283	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATGGGTAGTGATATAT	8610	False	NA	38	True	AATAAA	-22	NA	86342620	86347046	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_86342802_86343591_86343733_86345712
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143797	chr6	+	451	4	FSM	ENSMUSG00000057278.9	ENSMUST00000089558.7	1055	4	182	422	-56	-1	multi-exon	FALSE	canonical	3	2623	junction_2	545.029866663796	253	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTTTCTGCTGTTGTGG	NA	False	NA	28	True	AATAAA	-19	NA	86348467	86355888	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_86348597_86352658_86352682_86353476_86353602_86355714
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143806	chr6	+	214	1	Intergenic	novelGene_4473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATAACTTGCCTCTGCCT	NA	False	NA	NA	False	NA	NA	NA	86357357	86357571	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_86357400_86357600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143822	chr6	-	3668	6	FSM	ENSMUSG00000029998.15	ENSMUST00000032065.15	4295	6	9	618	-2	-618	multi-exon	FALSE	canonical	3	165	junction_3	15.4012986465428	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTTTCTCTTCTTTTTC	NA	False	NA	-6	True	ATTAAA	-15	NA	86374127	86363605	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_86366354_86368657_86368811_86369118_86369331_86371390_86371566_86372895_86373103_86373954
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143830	chr6	+	3796	13	FSM	ENSMUSG00000071337.12	ENSMUST00000095753.9	4477	13	73	608	1	-430	multi-exon	FALSE	canonical	3	90	junction_5	36.3397356744499	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGGGTCTTCTTGCAG	9754	False	NA	9	True	ATTAAA	-22	NA	86381273	86409779	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143846	chr6	-	174	1	Intergenic	novelGene_4474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAGATCTTTTAAAAAAGA	2968	False	NA	2	True	NA	NA	NA	86385738	86385564	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_86385600_86385700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143857	chr6	-	182	1	Intergenic	novelGene_4475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACCCAAAAAACTCAGGAA	NA	False	NA	NA	False	NA	NA	NA	86424688	86424506	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_86424500_86424700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143865	chr6	-	2083	1	FSM	ENSMUSG00000051695.7	ENSMUST00000053015.7	1830	1	-239	-14	-239	14	mono-exon	FALSE	NA	NA	NA	NA	NA	658	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGAATTCCTATCTTAA	NA	False	NA	-18	True	ATTAAA	-36	NA	86503542	86501459	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_86501500_86503500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143878	chr6	+	1727	4	FSM	ENSMUSG00000097048.8	ENSMUST00000180896.8	2099	4	372	0	-167	0	multi-exon	FALSE	canonical	3	81	junction_1	16.5126214353344	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGTATTTTTAAATTTA	NA	False	NA	9	True	NA	NA	NA	86503624	86541431	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_86504957_86509174_86509290_86540413_86540520_86541257
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143886	chr6	-	186	1	Intergenic	novelGene_4476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTCCACAATAGTGGCT	NA	False	NA	NA	False	NA	NA	NA	86526870	86526684	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_86526700_86526900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143889	chr6	+	145	1	Intergenic	novelGene_4477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACCAGCAAGTGTTCTTA	3782	False	NA	47	True	AATAAA	-32	NA	86543492	86543637	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_86543500_86543600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143904	chr6	-	827	6	FSM	ENSMUSG00000001158.14	ENSMUST00000001186.11	885	6	0	58	0	-58	multi-exon	FALSE	canonical	3	1763	junction_5	100.541732628794	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGACAAATATCTTTATTA	7646	False	NA	-4	True	AATAAA	-28	NA	86661504	86652190	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_86652563_86653203_86653269_86657888_86657969_86658572_86658686_86659837_86659959_86661428
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143923	chr6	-	187	1	FSM	ENSMUSG00000001157.14	ENSMUST00000203741.2	2750	1	1745	818	1745	-734	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCATTGCATCGCTCCTC	NA	False	NA	NA	False	NA	NA	NA	86692130	86691943	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_86691900_86692100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143934	chr6	-	1983	13	FSM	ENSMUSG00000029994.18	ENSMUST00000001187.15	2002	13	20	-1	0	0	multi-exon	FALSE	canonical	3	139	junction_5	17.8737858950537	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATTCTTTCTCTGATT	4626	False	NA	-1	True	ATTAAA	-19	NA	86770546	86713821	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_86714806_86718817_86718941_86720099_86720159_86721606_86721703_86725868_86725963_86728044_86728102_86729134_86729215_86730784_86730876_86731834_86731949_86734800_86734896_86737655_86737744_86742743_86742790_86770490
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143939	chr6	+	194	1	Intergenic	novelGene_4478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTCTCCTGCCAGGCAG	NA	False	NA	NA	False	NA	NA	NA	86723908	86724102	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_86723900_86724100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143945	chr6	+	197	1	Intergenic	novelGene_4479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAATGGCAGGTAGCG	NA	False	NA	NA	False	NA	NA	NA	86760505	86760702	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_86760500_86760700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143961	chr6	+	1198	9	NIC	ENSMUSG00000029993.17	novel	1195	9	NA	NA	-4	2	combination_of_known_junctions	FALSE	canonical	3	210	junction_1	876.96265598941	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTCCTCTCACGAATT	NA	False	NA	27	True	AATAAA	-33	NA	86986213	87005445	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_+_86986372_86986731_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143974	chr6	+	1177	9	NNC	ENSMUSG00000029993.17	novel	1195	9	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_1	921.93755719951	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTCCTCTCACGAATT	NA	False	NA	27	True	AATAAA	-33	NA	86986215	87005445	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_+_86986353_86986731_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143980	chr6	+	913	8	FSM	ENSMUSG00000029993.17	ENSMUST00000032060.15	948	8	42	-7	-2	0	multi-exon	FALSE	canonical	0	0	junction_5	1005.23440255576	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGCTTCCTCTCACGAA	NA	False	NA	25	True	AATAAA	-31	NA	86986859	87005443	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997825_87000109_87000171_87002467_87002643_87005276
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143990	chr6	+	3187	7	NIC	ENSMUSG00000029993.17	novel	1195	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	2373	junction_6	268.711534714997	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGCTTCCTCTCACGAA	NA	False	NA	25	True	AATAAA	-31	NA	86986870	87005443	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_+_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_87000171_87002467_87002643_87005276
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000143999	chr6	+	6255	19	FSM	ENSMUSG00000029992.15	ENSMUST00000113658.8	6238	19	-17	0	-17	0	multi-exon	FALSE	canonical	3	65	junction_15	18.2452429112053	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTGACTTTTTCTTTT	9928	False	NA	14	True	AATAAA	-15	NA	87019810	87069179	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_87019988_87027902_87028011_87030732_87030841_87031582_87031709_87033125_87033185_87034611_87034747_87036361_87036424_87037502_87037583_87040786_87040893_87043605_87043770_87044665_87044762_87050363_87050462_87053238_87053360_87054064_87054223_87059454_87059570_87062233_87062362_87063285_87063454_87064298_87064461_87065095
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144014	chr6	-	186	1	Intergenic	novelGene_4480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTTTTTAAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	87090445	87090259	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_87090300_87090400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144038	chr6	+	218	1	Antisense	novelGene_ENSMUSG00000108042.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGGGGCTGGTGAGATG	NA	False	NA	NA	False	NA	NA	NA	87809816	87810034	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr6_+_87809800_87810000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144043	chr6	+	199	1	Intergenic	novelGene_4481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGACGAGCTAAAAGATT	1271	False	NA	NA	False	NA	NA	NA	87812245	87812444	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_87812200_87812400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144092	chr6	+	4060	24	FSM	ENSMUSG00000030058.18	ENSMUST00000113607.10	4140	24	80	0	-34	0	multi-exon	TRUE	canonical	0	0	junction_2	198.307183759023	328	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTCAGCCTCCTTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	87864875	87890577	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144101	chr6	+	1478	7	NNC	ENSMUSG00000030060.15	novel	1572	6	NA	NA	-194	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	526.39858683532	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTGGCAAGAGTTCTG	2770	False	NA	30	True	AATAAA	-16	NA	87890722	87913597	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_+_87890828_87891472_87891678_87894820_87894965_87898507_87898634_87902613_87902793_87910223_87910417_87913071
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144107	chr6	+	1480	7	FSM	ENSMUSG00000030060.15	ENSMUST00000032141.14	1464	7	-16	0	-16	0	multi-exon	FALSE	canonical	0	0	junction_5	428.702078630629	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGGCTCTCACCCAGTA	2948	False	NA	44	True	AATAAA	-30	NA	87890900	87913611	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_87890994_87891472_87891678_87894820_87894965_87898507_87898634_87902613_87902793_87910223_87910417_87913071
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144118	chr6	-	1218	1	FSM	ENSMUSG00000044927.7	ENSMUST00000056403.7	1217	1	-1	0	-1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTGTCGTTGTCTTGTGG	6908	False	NA	-2	True	AATAAA	-16	NA	87958620	87957402	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_87957400_87958600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144127	chr6	-	2151	6	FSM	ENSMUSG00000079477.10	ENSMUST00000113600.10	2159	6	8	0	8	0	multi-exon	FALSE	canonical	3	1571	junction_1	157.281403859452	1289	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTGTCTTTTTCT	NA	False	NA	NA	False	AATAAA	-22	NA	88022244	87976087	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_88022054
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144148	chr6	-	177	1	Intergenic	novelGene_4482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGGAGGAGGAAAAGGAAG	729	False	NA	NA	False	NA	NA	NA	88044500	88044323	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_88044300_88044500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144154	chr6	+	225	1	Intergenic	novelGene_4483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAAATTGTTGCTGAG	3315	False	NA	NA	False	NA	NA	NA	88051395	88051620	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_88051400_88051600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144160	chr6	+	2320	10	FSM	ENSMUSG00000030062.8	ENSMUST00000032143.8	3633	10	-7	1320	-7	597	multi-exon	FALSE	canonical	3	2268	junction_5	110.706262438987	1473	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTCATGTAATTCTGAAG	530	False	NA	34	True	AATAAA	-40	NA	88061456	88080966	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_88061777_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88077964_88078956_88079203_88080346
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144184	chr6	+	3246	6	FSM	ENSMUSG00000015053.15	ENSMUST00000015197.9	3571	6	330	-5	330	3	multi-exon	FALSE	canonical	3	138	junction_4	9.31665175908169	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTGTTGAGTGGGTC	NA	False	NA	17	True	AATAAA	-18	NA	88175645	88184017	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_88175864_88176498_88176772_88177200_88177843_88179400_88179547_88181564_88181691_88182176
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144191	chr6	-	2686	7	FSM	ENSMUSG00000033216.10	ENSMUST00000165242.4	2679	7	-9	2	-9	-2	multi-exon	TRUE	canonical	3	371	junction_3	47.1643108952333	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGCTGTGATCAAATGAC	NA	False	NA	-10	True	ATTAAA	-14	NA	88423530	88234317	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_88235374_88258530_88258688_88274558_88275219_88332464_88332630_88335527_88335625_88353185_88353394_88423187
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144203	chr6	-	1471	6	NIC	ENSMUSG00000033216.10	novel	2208	8	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	78	junction_2	158.228189650264	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGTGCCCATAGTCTG	NA	False	NA	-14	True	AATAAA	-15	NA	88423509	88234851	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_88235374_88258530_88258688_88332464_88332630_88335527_88335625_88353185_88353394_88423187
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144208	chr6	+	189	1	Intergenic	novelGene_4484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAGATGGAGTGATGGCA	NA	False	NA	NA	False	NA	NA	NA	88327545	88327734	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_88327500_88327700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144217	chr6	+	185	1	Intergenic	novelGene_4485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTAAGCAACAAG	NA	False	NA	NA	False	NA	NA	NA	88415618	88415803	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_88415600_88415800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144219	chr6	+	1673	11	FSM	ENSMUSG00000030079.16	ENSMUST00000032165.16	1675	11	-3	5	-3	-5	multi-exon	FALSE	canonical	3	1160	junction_1	83.5499850388975	406	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTGTAGGTTTTTATAT	NA	False	NA	26	True	AATAAA	-26	NA	88442387	88474549	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_88442651_88444547_88444635_88450058_88450192_88456108_88456261_88459099_88459190_88459944_88460095_88461389_88461454_88462694_88462894_88468497_88468601_88473389_88473482_88474209
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144233	chr6	-	3163	12	FSM	ENSMUSG00000030082.15	ENSMUST00000032168.7	3172	12	-12	21	-12	-21	multi-exon	FALSE	canonical	3	923	junction_2	46.8136802778528	591	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCGTCATCTTTGTAAAC	9083	False	NA	-16	True	AATAAA	-18	NA	88495899	88480581	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88489083_88489238_88489477_88489588_88491294_88491427_88492325_88492405_88492485_88492552_88495352_88495421_88495667
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144250	chr6	-	1572	8	ISM	ENSMUSG00000030083.12	ENSMUST00000032169.8	1845	12	2287	0	-24	0	3prime_fragment	FALSE	canonical	3	333	junction_3	29.2665442484229	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGCCTGTTGTTGGGGT	9251	False	NA	-4	True	AATAAA	-21	NA	88816595	88812895	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144283	chr6	-	3472	15	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-3	0	intron_retention	FALSE	canonical	1	1040	junction_7	595.900900027061	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGGTTCTGGTTTAA	NA	False	NA	-3	True	AATAAA	-16	NA	88875662	88860455	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144325	chr6	-	1102	8	FSM	ENSMUSG00000030086.17	ENSMUST00000032172.14	1121	8	15	4	15	-4	multi-exon	FALSE	canonical	3	184	junction_4	25.4486277245203	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTGGCACCCAGTCACT	NA	False	NA	-9	True	AATAAA	-28	NA	89572619	89360136	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_89360331_89361585_89361722_89396729_89396801_89444371_89444456_89544568_89544714_89546324_89546395_89551349_89551573_89572440
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144333	chr6	+	2761	16	FSM	ENSMUSG00000000811.15	ENSMUST00000000828.14	2836	16	-10	85	-10	-85	multi-exon	FALSE	canonical	3	51	junction_10	10.7467824642231	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGATCTAATTCGTT	NA	False	NA	6	True	ATTAAA	-17	NA	89620959	89652426	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_89621385_89627507_89627569_89628480_89628591_89631035_89631141_89631330_89631404_89633009_89633130_89638440_89638584_89640058_89640175_89641359_89641586_89642681_89642775_89646286_89646364_89646799_89646957_89649152_89649261_89649949_89650046_89651042_89651178_89651710
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144353	chr6	+	2383	3	FSM	ENSMUSG00000030087.12	ENSMUST00000032174.12	2373	3	-8	-2	-8	2	multi-exon	FALSE	canonical	3	353	junction_2	6.5	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTTGGCCCTGTATT	NA	False	NA	30	True	AATAAA	-26	NA	90439549	90452222	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_90439708_90443401_90444506_90451101
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144365	chr6	+	3081	23	FSM	ENSMUSG00000030088.16	ENSMUST00000032175.11	3052	23	-27	-2	-11	2	multi-exon	FALSE	canonical	3	110	junction_1	30.2788691558217	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTCACTGCTCTGTC	NA	False	NA	15	True	AATAAA	-25	NA	90527759	90576153	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_90527880_90534183_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144376	chr6	+	3134	23	FSM	ENSMUSG00000030088.16	ENSMUST00000130418.8	4175	23	7	1034	7	0	multi-exon	FALSE	canonical	3	47	junction_1	39.2549675753126	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGTGTCACTGCTCTG	NA	False	NA	13	True	AATAAA	-23	NA	90527777	90576151	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_90527953_90534183_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144410	chr6	+	2901	12	FSM	ENSMUSG00000030095.11	ENSMUST00000032183.6	2903	12	-2	4	-2	-4	multi-exon	FALSE	canonical	3	107	junction_7	13.7209497779825	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCCAGTCGTTTGCTGT	9686	False	NA	NA	False	AATAAA	-26	NA	91450682	91465441	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_91450881_91454226_91454377_91455187_91455323_91455687_91455783_91456554_91456605_91456862_91456933_91457631_91457703_91458913_91459036_91459235_91459311_91459642_91459745_91462298_91462417_91463726
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144446	chr6	+	196	1	Intergenic	novelGene_4486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACCCATGAGGACAGGG	NA	False	NA	NA	False	NA	NA	NA	91618427	91618623	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_91618400_91618600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144459	chr6	+	6136	15	NNC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	97.4735181200201	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGTCTGGTGTGTTTCGG	NA	False	NA	28	True	AATAAA	-22	NA	91661084	91736044	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_+_91661290_91675969_91676014_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718038_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144470	chr6	+	201	1	Intergenic	novelGene_4487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	214	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACCTTGGCTGAGGTCAG	NA	False	NA	NA	False	NA	NA	NA	91664247	91664448	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_91664200_91664400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144521	chr6	-	1437	3	FSM	ENSMUSG00000005892.5	ENSMUST00000006046.5	1384	3	-53	0	-53	0	multi-exon	FALSE	canonical	3	80	junction_1	3.5	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGCTTTGCTCTTCTG	NA	False	NA	-13	True	AATAAA	-15	NA	92221684	92219041	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_92220107_92220652_92220869_92221528
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144536	chr6	+	222	1	Intergenic	novelGene_4488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	280	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGGGATCGGCTTATAC	NA	False	NA	NA	False	NA	NA	NA	93529364	93529586	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_93529400_93529600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144544	chr6	+	176	1	Intergenic	novelGene_4489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCATACAACTGAGGCCCT	NA	False	NA	NA	False	NA	NA	NA	93980828	93981004	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_93980800_93981000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144550	chr6	+	191	1	Intergenic	novelGene_4490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTAGGACTTGAATGGACA	NA	False	NA	NA	False	NA	NA	NA	94165587	94165778	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_94165600_94165800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144552	chr6	+	2127	1	Intergenic	novelGene_4491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAAATGGGTTAATATAA	6430	False	NA	NA	False	NA	NA	NA	94228386	94230513	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_94228400_94230500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144554	chr6	+	176	1	Intergenic	novelGene_4492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCAGTTGTTTGGCTTA	NA	False	NA	NA	False	NA	NA	NA	94270757	94270933	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_94270800_94270900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144567	chr6	-	5026	19	FSM	ENSMUSG00000030029.15	ENSMUST00000101126.3	4951	19	-68	-7	-47	0	multi-exon	FALSE	canonical	3	92	junction_14	16.0804305574689	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGCGGCGGTCACTGC	6692	False	NA	NA	False	AATAAA	-21	NA	94677186	94581509	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_94582985_94583083_94583345_94584272_94584420_94585020_94585147_94585689_94586110_94586597_94586880_94588352_94588674_94590544_94590709_94593369_94593442_94594226_94594299_94597233_94597315_94599595_94599740_94601910_94602055_94603349_94603494_94604940_94605085_94607082_94607221_94631827_94631903_94640907_94640980_94676442
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144575	chr6	-	247	2	Intergenic	novelGene_4493	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	60	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGCTCAAGATCTTCAA	NA	False	NA	NA	False	NA	NA	NA	95023519	95023219	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_95023285_95023337
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144618	chr6	-	2398	18	FSM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	50	-191	-29	2	multi-exon	FALSE	canonical	3	461	junction_17	79.0590861340176	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATAGTCAAGTCTCTC	NA	False	NA	-16	True	AGTAAA	-19	NA	97182558	97160776	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144633	chr6	-	2140	17	FSM	ENSMUSG00000030061.17	ENSMUST00000164744.8	2465	17	-8	333	0	4	multi-exon	FALSE	canonical	3	82	junction_16	154.413292315623	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAAAGTATATCAATAATA	NA	False	NA	-3	True	AATAAA	-28	NA	97182529	97160963	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182493
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144669	chr6	+	218	1	Intergenic	novelGene_4494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTAATCCTGCGCTGGGC	NA	False	NA	NA	False	NA	NA	NA	98890505	98890723	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_98890500_98890700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144676	chr6	+	174	1	Intergenic	novelGene_4495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAGAAAGAACTAAC	NA	False	NA	NA	False	NA	NA	NA	99283522	99283696	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_99283500_99283700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144683	chr6	+	236	1	Intergenic	novelGene_4496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTGACTAAGACAAGAGAG	NA	False	NA	NA	False	NA	NA	NA	99394278	99394514	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_99394300_99394500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144706	chr6	-	4507	5	FSM	ENSMUSG00000072872.4	ENSMUST00000101118.4	4503	5	-4	0	-4	0	multi-exon	FALSE	canonical	3	260	junction_4	17.7552809045647	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGAGATGATTATTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	100264450	100205525	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_100209387_100209827_100209927_100210023_100210201_100263443_100263570_100264206
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144736	chr6	+	2782	8	NIC	ENSMUSG00000052144.9	novel	4874	9	NA	NA	24	388	combination_of_known_junctions	FALSE	canonical	3	45	junction_6	200.648235192125	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGAGTACATTTTTATC	9684	False	NA	23	True	AATAAA	-17	NA	100810606	100844971	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842748_100843045_100843217
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144743	chr6	-	4208	10	FSM	ENSMUSG00000035357.18	ENSMUST00000075994.11	4104	10	-109	5	-109	-5	multi-exon	FALSE	canonical	3	11	junction_6	4.85340659285368	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTCTGACATGGGTGTT	NA	False	NA	-9	True	AATAAA	-19	NA	101354967	101126574	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_101129030_101130179_101130297_101131154_101131257_101132830_101132894_101133874_101133974_101146094_101146183_101149160_101149409_101331354_101331463_101339099_101339187_101354126
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144748	chr6	+	2250	9	FSM	ENSMUSG00000013736.17	ENSMUST00000113248.4	1398	9	-32	-820	-7	0	multi-exon	FALSE	canonical	3	228	junction_1	232.818296907696	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTCGTTATTTCTGT	NA	False	NA	12	True	AATAAA	-21	NA	106746094	106759435	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_106746153_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144761	chr6	+	2282	9	FSM	ENSMUSG00000013736.17	ENSMUST00000057578.16	2283	9	1	0	1	0	multi-exon	FALSE	canonical	3	574	junction_1	132.149477392081	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTCGTTATTTCTGT	NA	False	NA	12	True	AATAAA	-21	NA	106746127	106759435	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_106746218_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144786	chr6	-	4029	11	FSM	ENSMUSG00000005362.15	ENSMUST00000113239.10	2084	11	5	-1950	-4	1950	multi-exon	FALSE	canonical	3	188	junction_5	22.0871003076456	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCAAAGTTTATCTCAGAA	NA	False	NA	-8	True	AATAAA	-21	NA	106777030	106755211	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772842_106772959_106776951
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144793	chr6	-	2068	11	FSM	ENSMUSG00000005362.15	ENSMUST00000013882.10	2072	11	4	0	0	0	multi-exon	FALSE	canonical	3	47	junction_10	56.1066840937869	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGCTCCTTAATGTCATT	NA	False	NA	-33	True	AATAAA	-17	NA	106777022	106757161	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772842_106772956_106776951
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144802	chr6	-	2595	9	FSM	ENSMUSG00000030101.16	ENSMUST00000032191.16	2593	9	2	-4	2	4	multi-exon	FALSE	canonical	3	77	junction_4	15.6204993518133	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTCACTTTTTCATTCTT	2474	False	NA	NA	False	AATAAA	-19	NA	108162541	108083984	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_108085548_108095580_108095641_108121551_108121666_108129187_108129303_108130073_108130197_108131919_108132003_108150316_108150392_108152948_108153123_108162253
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144817	chr6	+	193	1	Intergenic	novelGene_4497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATACAAATGGCCACTGG	NA	False	NA	NA	False	NA	NA	NA	108537831	108538024	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_108537800_108538000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144822	chr6	+	2967	5	FSM	ENSMUSG00000030103.12	ENSMUST00000032194.11	3113	5	0	146	0	-146	multi-exon	FALSE	canonical	3	205	junction_3	24.2899156029822	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTCCTTGGTTTTAAAA	NA	False	NA	16	True	AATAAA	-28	NA	108637589	108643740	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_108637954_108638121_108638192_108638465_108638574_108639481_108639606_108641439
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144839	chr6	+	5987	12	FSM	ENSMUSG00000030104.10	ENSMUST00000089162.5	5817	12	-162	-8	-129	0	multi-exon	FALSE	canonical	3	297	junction_5	22.3007245184901	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTTCTCCTTTGCATG	NA	False	NA	18	True	ATTAAA	-23	NA	108805472	108836317	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144869	chr6	-	3616	12	NIC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	172	junction_1	27.9506649191301	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTTGTTGTTGTTGTA	NA	False	NA	-4	True	AATAAA	-20	NA	112673631	112603375	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144884	chr6	+	2090	10	FSM	ENSMUSG00000030264.15	ENSMUST00000032398.15	2163	10	78	-5	1	5	multi-exon	TRUE	canonical	3	600	junction_1	54.2445309298778	463	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGCGTTATTTTCCAAA	NA	False	NA	8	True	ATTAAA	-21	NA	113023263	113045239	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_113023352_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144909	chr6	-	1109	2	FSM	ENSMUSG00000086429.10	ENSMUST00000159544.3	822	2	89	-376	-34	0	multi-exon	FALSE	canonical	3	30	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGAATGACTTTTTAAT	NA	False	NA	0	True	NA	NA	NA	113054205	113047358	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_113048397_113054134
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144929	chr6	+	2489	19	FSM	ENSMUSG00000030269.15	ENSMUST00000113146.9	2676	19	-3	190	-3	6	multi-exon	TRUE	canonical	3	298	junction_17	28.028204489649	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATTAGCATTTCATCC	1965	False	NA	19	True	AATAAA	-20	NA	113214800	113258163	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254750_113254907_113257563
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144953	chr6	+	195	1	Intergenic	novelGene_4498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCAAAGTTCTCGGACAA	5797	False	NA	NA	False	NA	NA	NA	113218632	113218827	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_113218600_113218800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144958	chr6	+	191	1	Intergenic	novelGene_4499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAACCGGGTGGTGGTGCA	9303	False	NA	NA	False	NA	NA	NA	113222138	113222329	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_113222100_113222300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000144990	chr6	+	1570	7	FSM	ENSMUSG00000030271.15	ENSMUST00000032406.15	1549	7	-21	0	-21	0	multi-exon	FALSE	canonical	3	196	junction_2	21.4534379529249	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAGTGAAGAGTGAGAGGG	2287	False	NA	14	True	AATAAA	-23	NA	113303911	113311149	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_113304324_113305325_113305574_113306189_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145016	chr6	+	225	1	Intergenic	novelGene_4500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	305	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAATGCTGTTTAAGCCT	5801	False	NA	NA	False	NA	NA	NA	113313677	113313902	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_113313700_113313900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145042	chr6	-	1778	10	NIC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	134	junction_9	97.0713114476818	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATAAAAAAACCACCCGC	NA	False	NA	18	True	AATAAA	-36	NA	113354350	113343615	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113353852_113353907_113354276
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145088	chr6	+	2303	18	NIC	ENSMUSG00000030281.17	novel	2302	17	NA	NA	71	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	8.17117899020487	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTAGCACTCGTGTATC	5827	False	NA	6	True	AATAAA	-21	NA	113448458	113460101	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_+_113448749_113449031_113449054_113449191_113449345_113449587_113449651_113449738_113449849_113451121_113451234_113451513_113451559_113453359_113453500_113453695_113453756_113455824_113455880_113455949_113456132_113456211_113456263_113457090_113457137_113457266_113457389_113457718_113457779_113458144_113458197_113459243_113459340_113459457
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145094	chr6	+	2149	10	FSM	ENSMUSG00000030284.12	ENSMUST00000032422.6	2306	10	162	-5	36	0	multi-exon	TRUE	canonical	3	165	junction_1	17.0945085399441	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCAGTCTTAACAACCCA	1619	False	NA	18	True	AATAAA	-24	NA	113460419	113470304	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_113461038_113461455_113461539_113465031_113465143_113465439_113465532_113466394_113466572_113466655_113466752_113468613_113468698_113468854_113468951_113469084_113469220_113469647
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145108	chr6	-	1979	8	FSM	ENSMUSG00000030286.7	ENSMUST00000032425.7	1985	8	6	0	6	0	multi-exon	FALSE	canonical	3	306	junction_2	13.3386044002714	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTGCTTCTGTGGGTTCT	NA	False	NA	2	True	ATTAAA	-29	NA	113508607	113491834	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_113492993_113494057_113494141_113494842_113494923_113496875_113496958_113497437_113497543_113499274_113499369_113499710_113499769_113508288
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145116	chr6	+	5518	44	FSM	ENSMUSG00000034023.17	ENSMUST00000036340.12	5512	44	0	-6	0	6	multi-exon	TRUE	canonical	3	237	junction_19	37.6323336574577	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGGTTTTTTGTTTTT	NA	False	NA	17	True	ATTAAA	-22	NA	113508642	113573984	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145128	chr6	+	5461	43	FSM	ENSMUSG00000034023.17	ENSMUST00000204827.3	4707	43	-8	-746	-8	2	multi-exon	FALSE	canonical	3	81	junction_38	50.0643576738687	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGGTTTTTTGT	NA	False	NA	13	True	ATTAAA	-18	NA	113508656	113573980	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145138	chr6	+	176	1	Intergenic	novelGene_4501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGGAGGCACTA	NA	False	NA	NA	False	NA	NA	NA	113567715	113567891	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_113567700_113567900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145141	chr6	+	1150	3	FSM	ENSMUSG00000033940.9	ENSMUST00000035725.7	1095	3	-55	0	-55	0	multi-exon	FALSE	canonical	3	441	junction_2	10.5	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATGTTTATGATCTGTT	NA	False	NA	11	True	AATAAA	-21	NA	113581677	113593912	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_113581858_113592736_113592820_113593025
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145151	chr6	+	2761	3	FSM	ENSMUSG00000033933.14	ENSMUST00000035673.8	2792	3	35	-4	35	4	multi-exon	FALSE	canonical	3	134	junction_1	12	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTGTGTTACCTTTTT	193	False	NA	23	True	AATAAA	-23	NA	113600954	113608598	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_113601340_113605052_113605176_113606345
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145163	chr6	+	191	1	Antisense	novelGene_ENSMUSG00000107846.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAGAGAGAAAAGA	3061	False	NA	NA	False	NA	NA	NA	113653663	113653854	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr6_+_113653700_113653900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145180	chr6	-	1619	8	NIC	ENSMUSG00000030298.11	novel	1353	9	NA	NA	28	-5	intron_retention	FALSE	canonical	3	942	junction_7	83.0657472568985	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTACTGTCATCCCACACA	2221	False	NA	-15	True	AATAAA	-18	NA	113717660	113705027	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_113705425_113706556_113706704_113707295_113707869_113711506_113711641_113712017_113712170_113713332_113713449_113714914_113714960_113717605
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145193	chr6	+	195	1	Intergenic	novelGene_4502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTAAAAGTGAAACTGAAGG	NA	False	NA	NA	False	NA	NA	NA	114025322	114025517	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_114025300_114025500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145210	chr6	+	2355	19	FSM	ENSMUSG00000030314.17	ENSMUST00000032457.17	3761	19	16	1390	1	0	multi-exon	FALSE	canonical	3	23	junction_1	29.6327313191359	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCTCAGGTCCTTCC	NA	False	NA	6	True	NA	NA	NA	114620073	114836185	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_114620112_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145217	chr6	+	2400	20	NIC	ENSMUSG00000030314.17	novel	2543	21	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	29.4466041008941	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCTCAGGTCCTTCC	NA	False	NA	6	True	NA	NA	NA	114620081	114836185	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_+_114620112_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145228	chr6	+	194	1	Intergenic	novelGene_4503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAGCAGGCTGAGCA	NA	False	NA	NA	False	NA	NA	NA	114802247	114802441	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_114802200_114802400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145237	chr6	+	119	1	Intergenic	novelGene_4504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAATCCATTCACAGCTG	NA	False	NA	NA	False	AATAAA	-14	NA	114891672	114891791	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_114891700_114891800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145247	chr6	-	1163	8	FSM	ENSMUSG00000030316.14	ENSMUST00000032461.12	1168	8	2	3	2	-3	multi-exon	FALSE	canonical	3	439	junction_6	13.6695699587494	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTGTCACTCTGACTG	NA	False	NA	-37	True	AATAAA	-22	NA	115014835	114981344	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_114981481_114987767_114987831_114989118_114989285_114993043_114993190_115002234_115002386_115009180_115009274_115011911_115012095_115014610
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145263	chr6	+	227	1	Intergenic	novelGene_4505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTGGCACATGGTAGTC	NA	False	NA	NA	False	NA	NA	NA	115471554	115471781	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_115471600_115471800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145267	chr6	+	1801	12	FSM	ENSMUSG00000042389.14	ENSMUST00000040234.9	2106	12	27	278	-11	-278	multi-exon	FALSE	canonical	3	175	junction_1	38.6343314973604	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGCAGTTAGCATTTAG	NA	False	NA	28	True	AATAAA	-28	NA	115521651	115555311	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_115521690_115524782_115524992_115526873_115526956_115530951_115530989_115536553_115537062_115538340_115538419_115542837_115542889_115545656_115545796_115551523_115551561_115552822_115552935_115553856_115553947_115554891
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145275	chr6	+	1702	11	NIC	ENSMUSG00000042389.14	novel	2106	12	NA	NA	-4	-288	combination_of_known_junctions	FALSE	canonical	3	50	junction_2	74.5318723768563	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAGAGAATAAATGCAGT	NA	False	NA	18	True	AATAAA	-18	NA	115521658	115555301	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_+_115521690_115524782_115524992_115530951_115530989_115536553_115537062_115538340_115538419_115542837_115542889_115545656_115545796_115551523_115551561_115552822_115552935_115553856_115553947_115554891
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145281	chr6	+	2294	8	FSM	ENSMUSG00000000439.10	ENSMUST00000000449.9	6230	8	-2	3938	-2	-3938	multi-exon	FALSE	canonical	2	438	junction_3	36.5396066911353	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTATTCCTGGCTTTCTT	NA	False	NA	NA	False	AATAAA	-33	NA	115578860	115595647	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_115578975_115586541_115586671_115587479_115587662_115588595_115588901_115590287_115590503_115591535_115591647_115594258_115594404_115594554
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145290	chr6	-	3047	17	FSM	ENSMUSG00000000441.18	ENSMUST00000000451.14	3070	17	23	0	23	0	multi-exon	FALSE	canonical	3	610	junction_8	72.4119076878934	549	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGTGCAGTTTCTTGT	8167	False	NA	0	True	AATAAA	-43	NA	115653573	115595529	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145304	chr6	-	179	1	Intergenic	novelGene_4506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGATATCTGATTC	NA	False	NA	NA	False	NA	NA	NA	115714852	115714673	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_115714700_115714900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145360	chr6	+	182	1	Intergenic	novelGene_4507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGACATGCCCACTTGTGG	NA	False	NA	NA	False	NA	NA	NA	115977204	115977386	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_115977200_115977400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145374	chr6	+	885	1	FSM	ENSMUSG00000101878.2	ENSMUST00000173192.2	387	1	-107	-391	-107	391	mono-exon	FALSE	NA	NA	NA	NA	NA	764	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACCAAAACACCAAATGCA	NA	False	NA	NA	False	AATAAA	-32	NA	116150590	116151475	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_116150600_116151500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145415	chr6	+	4623	7	FSM	ENSMUSG00000025702.16	ENSMUST00000101032.10	4611	7	-12	0	-3	0	multi-exon	FALSE	canonical	3	24	junction_1	7.30296743340222	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGATGAGAGTGTTTT	NA	False	NA	10	True	AATAAA	-20	NA	116314981	116386501	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_116315452_116353653_116353825_116369484_116369536_116377997_116378084_116380380_116380562_116382595_116382744_116382985
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145429	chr6	-	2265	2	FSM	ENSMUSG00000059878.13	ENSMUST00000079749.6	3187	2	20	902	20	4	multi-exon	FALSE	canonical	3	68	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATCTATTTTACTTCTG	NA	False	NA	-1	True	AATAAA	-22	NA	116605940	116601878	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_116604095_116605891
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145447	chr6	+	2615	3	FSM	ENSMUSG00000042097.18	ENSMUST00000079405.15	3158	3	18	525	11	1	multi-exon	FALSE	canonical	3	13	junction_1	2	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTCCAATGTGTTCATTTG	NA	False	NA	13	True	TTTAAA	-7	NA	117840055	117849727	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_117840104_117846178_117846235_117847216
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145451	chr6	-	188	1	Intergenic	novelGene_4508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCATATCGCTGGGCAG	NA	False	NA	NA	False	NA	NA	NA	117855387	117855199	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_117855200_117855400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145458	chr6	+	2309	4	FSM	ENSMUSG00000042079.14	ENSMUST00000167182.8	2271	4	-37	-1	-21	0	multi-exon	TRUE	canonical	3	103	junction_1	2299.04709728956	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCACAGCTTATGTACTC	NA	False	NA	NA	False	AATAAA	-17	NA	117877263	117902583	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_117877468_117894430_117894560_117896059_117896121_117900668
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145490	chr6	+	2204	4	NNC	ENSMUSG00000042079.14	novel	2280	3	NA	NA	933	1	at_least_one_novel_splicesite	FALSE	canonical	3	602	junction_1	2063.97825139274	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCACAGCTTATGTACTCA	4721	False	NA	NA	False	AATAAA	-18	NA	117884742	117902584	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_+_117884841_117894430_117894560_117896059_117896121_117900668
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145495	chr6	+	2243	4	NNC	ENSMUSG00000042079.14	novel	2280	3	NA	NA	933	1	at_least_one_novel_splicesite	FALSE	canonical	3	135	junction_1	2283.97154097856	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCACAGCTTATGTACTCA	4721	False	NA	NA	False	AATAAA	-18	NA	117884742	117902584	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_+_117884880_117894430_117894560_117896059_117896121_117900668
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145503	chr6	+	2240	4	FSM	ENSMUSG00000042079.14	ENSMUST00000179478.8	956	4	-43	-1241	-43	1	multi-exon	FALSE	canonical	3	625	junction_1	2053.14430948133	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCACAGCTTATGTACTCA	NA	False	NA	NA	False	AATAAA	-18	NA	117893898	117902584	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_117894033_117894430_117894560_117896059_117896121_117900668
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145513	chr6	+	2529	3	FSM	ENSMUSG00000042079.14	ENSMUST00000180020.8	2280	3	-247	-2	66	1	multi-exon	FALSE	canonical	3	4878	junction_1	99	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCACAGCTTATGTACTCA	NA	False	NA	NA	False	AATAAA	-18	NA	117894007	117902584	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_117894560_117896059_117896121_117900668
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145521	chr6	-	218	1	Intergenic	novelGene_4509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGTGCTAAAGCAAAAAGA	7477	False	NA	NA	False	AAGAAA	-17	NA	117900280	117900062	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_117900100_117900300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145523	chr6	+	185	2	Antisense	novelGene_ENSMUSG00002075781.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCATGCACCTGCCTTGC	NA	False	NA	NA	False	NA	NA	NA	117900087	117926141	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr6_+_117900247_117926115
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145542	chr6	+	3240	13	FSM	ENSMUSG00000030134.12	ENSMUST00000203482.2	2227	13	-38	-975	-38	0	multi-exon	FALSE	canonical	3	24	junction_10	5.92780641459291	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGTCTCTCTCTCTCT	NA	False	NA	3	True	NA	NA	NA	118043341	118068507	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_118043424_118057318_118057523_118059974_118060098_118061381_118061520_118062224_118062447_118062733_118062809_118063177_118063271_118063987_118064091_118064167_118064248_118065069_118065262_118066063_118066188_118066395_118066469_118066776
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145556	chr6	-	4316	23	FSM	ENSMUSG00000030138.9	ENSMUST00000032237.8	4345	23	29	0	29	0	multi-exon	FALSE	canonical	2	285	junction_22	59.9717047606688	314	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCCTAGTGATTTATT	8314	False	NA	-1	True	ATTAAA	-16	NA	118396406	118360341	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369686_118369763_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394540_118395369_118395579_118396248
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145588	chr6	+	1877	9	FSM	ENSMUSG00000041477.15	ENSMUST00000112777.9	3313	9	26	1410	-9	0	multi-exon	FALSE	canonical	3	31	junction_6	11.8684192291981	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTCTGGGGGTTTTGTT	NA	False	NA	9	True	AGTAAA	-16	NA	119152239	119197167	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_119152404_119157025_119157067_119160610_119160739_119175888_119175956_119177782_119177913_119183430_119183560_119191730_119192568_119194763_119194941_119196963
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145613	chr6	+	156	1	Intergenic	novelGene_4510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTATGCTCTGACCACC	NA	False	NA	NA	False	NA	NA	NA	119430178	119430334	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_119430200_119430300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145619	chr6	+	3113	1	FSM	ENSMUSG00000030019.7	ENSMUST00000032094.7	2963	1	-150	0	-150	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCCCTTGTATCTGTGA	NA	False	NA	42	True	AATAAA	-43	NA	119456478	119459591	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_119456500_119459600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145637	chr6	-	175	1	Intergenic	novelGene_4511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGACTGGAGTTGAGAGA	NA	False	NA	NA	False	NA	NA	NA	120039614	120039439	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_120039400_120039600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145641	chr6	+	193	1	Intergenic	novelGene_4512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTTTTTTTTTAGCTT	NA	False	NA	NA	False	AATAAA	-10	NA	120055444	120055637	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_120055400_120055600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145644	chr6	+	225	1	Intergenic	novelGene_4513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	809	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATTAAAATAGATTAAAAT	NA	False	NA	NA	False	NA	NA	NA	120064236	120064461	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_120064200_120064500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145651	chr6	+	203	1	Intergenic	novelGene_4514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCATTGGCTACTCTTCCA	9177	False	NA	NA	False	NA	NA	NA	120102552	120102755	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_120102600_120102800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145664	chr6	+	196	1	Intergenic	novelGene_4515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGCAGAATCTTTC	1168	False	NA	NA	False	NA	NA	NA	120190279	120190475	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_120190300_120190500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145670	chr6	+	376	1	Intergenic	novelGene_4516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATCACAAGAGAAAAACTAC	NA	False	NA	NA	False	NA	NA	NA	120204670	120205046	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_120204700_120205000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145676	chr6	-	149	1	Intergenic	novelGene_4517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAGATATTTATTATCTT	NA	False	NA	NA	False	NA	NA	NA	120206008	120205859	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_120205900_120206000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145680	chr6	+	188	1	Intergenic	novelGene_4518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAGAAAAACCAGAGACAGA	NA	False	NA	NA	False	NA	NA	NA	120269258	120269446	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_120269300_120269400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145694	chr6	-	2567	12	FSM	ENSMUSG00000030177.15	ENSMUST00000032283.12	2610	12	45	-2	-7	2	multi-exon	FALSE	canonical	3	123	junction_10	52.5397920824409	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGGCTCTACAAAGTCTC	NA	False	NA	-12	True	AATAAA	-20	NA	120334345	120301281	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327406_120330961_120331016_120334287
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145713	chr6	+	223	1	Intergenic	novelGene_4519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGAGCCGGGCAGTGGTG	NA	False	NA	NA	False	NA	NA	NA	120328203	120328426	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_120328200_120328400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145721	chr6	+	236	2	NNC	ENSMUSG00000030180.16	novel	2716	3	NA	NA	21	112859	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTTCAGATCTTGAAGG	744	False	NA	NA	False	NA	NA	NA	120382784	120534394	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_+_120382817_120534190
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145725	chr6	+	3974	13	FSM	ENSMUSG00000002897.6	ENSMUST00000002976.5	7752	13	-50	3828	-50	2	multi-exon	FALSE	canonical	1	10	junction_10	8.77931596930472	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATAGTTGTTATTGAATC	262	False	NA	7	True	AATAAA	-20	NA	120440157	120460692	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_120440428_120449052_120449078_120449886_120450034_120450714_120450828_120451250_120451378_120452189_120452238_120452416_120452581_120453850_120453935_120454356_120454442_120455124_120455137_120455335_120455444_120456963_120457006_120457943
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145736	chr6	-	223	1	Intergenic	novelGene_4520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAAAACCAACTAACCCAA	784	False	NA	NA	False	TTTAAA	-6	NA	120472729	120472506	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_120472500_120472700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145750	chr6	-	1929	8	FSM	ENSMUSG00000058979.8	ENSMUST00000075303.7	1928	8	-1	0	-1	0	multi-exon	FALSE	canonical	3	207	junction_3	16.3245151817249	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTCTTGTGAGGATT	NA	False	NA	35	True	ATTAAA	-21	NA	120508281	120486454	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_120487424_120487591_120487781_120491358_120491534_120494010_120494042_120495404_120495499_120498154_120498268_120500366_120500571_120508127
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145756	chr6	+	196	1	Intergenic	novelGene_4521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACCTTGTTTCAAAAACT	NA	False	NA	NA	False	NA	NA	NA	120571188	120571384	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_120571200_120571400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145766	chr6	-	278	1	Intergenic	novelGene_4522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTCTTTCTCAGGATCA	NA	False	NA	NA	False	NA	NA	NA	120624727	120624449	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_120624400_120624700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145782	chr6	+	81	1	FSM	ENSMUSG00000071226.12	ENSMUST00000204732.2	3996	1	3645	270	3645	-270	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAGAAGTGGGACTTTT	NA	False	NA	NA	False	NA	NA	NA	120716361	120716442	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_120716400_120716400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145789	chr6	-	1266	9	FSM	ENSMUSG00000019210.11	ENSMUST00000019354.11	1312	9	47	-1	47	1	multi-exon	FALSE	canonical	3	841	junction_3	98.1488028454754	241	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTTGTTGTTCCTTATGT	NA	False	NA	-2	True	ATTAAA	-20	NA	120799707	120772203	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_120772726_120774837_120774926_120778003_120778099_120780268_120780338_120781003_120781094_120784546_120784614_120785322_120785433_120795294_120795361_120799548
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145814	chr6	-	1966	6	FSM	ENSMUSG00000004446.13	ENSMUST00000004560.12	2189	6	-17	240	-17	-240	multi-exon	FALSE	canonical	3	795	junction_5	85.8011654932496	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCTAGTACATCAGAAGG	NA	False	NA	-1	True	AATAAA	-41	NA	120893831	120870054	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120893694
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145823	chr6	-	1842	6	NNC	ENSMUSG00000004446.13	novel	2189	6	NA	NA	-11	-265	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_5	358.381137896514	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGGGAGAGCTGTATCT	NA	False	NA	-26	True	AATAAA	-16	NA	120893825	120870079	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120893787
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145844	chr6	-	2849	18	NIC	ENSMUSG00000051586.18	novel	2875	18	NA	NA	-72	1	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	13.1507101127881	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCCTTTAGTGTGATTG	NA	False	NA	1	True	AATAAA	-25	NA	121087126	120984194	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_120984391_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145854	chr6	+	199	1	Intergenic	novelGene_4523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAACCACTTCATTGGGA	NA	False	NA	NA	False	NA	NA	NA	121149363	121149562	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_121149400_121149600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145857	chr6	+	3883	5	FSM	ENSMUSG00000067825.12	ENSMUST00000088561.10	4093	5	210	0	-12	0	multi-exon	FALSE	canonical	3	35	junction_4	5.31507290636732	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATCTGTTTCTACTTTC	NA	False	NA	NA	False	NA	NA	NA	121160835	121173151	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_121161442_121162668_121162810_121164217_121164526_121167059_121167207_121170470
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145866	chr6	+	197	1	Antisense	novelGene_ENSMUSG00000107915.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGCAAGCCAGCAAGCAA	NA	False	NA	NA	False	NA	NA	NA	121174342	121174539	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr6_+_121174300_121174500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145868	chr6	+	1519	5	NNC	ENSMUSG00000030137.9	novel	2263	5	NA	NA	-8367	-756	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	2.06155281280883	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGCCTCTTTCTTTGTGT	NA	False	NA	4	True	AATATA	-15	NA	121179287	121203057	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_+_121179441_121197342_121197566_121198259_121198409_121199692_121200374_121202744
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145885	chr6	+	182	1	Intergenic	novelGene_4524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACTCTACCGAAAACCTC	NA	False	NA	NA	False	NA	NA	NA	122232235	122232417	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_122232200_122232400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145893	chr6	+	2398	7	FSM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	118	-1	118	1	multi-exon	FALSE	canonical	3	1209	junction_5	55.6586820620906	246	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTGTCGTTTGTGCTA	2782	False	NA	7	True	ATTAAA	-16	NA	122285796	122294640	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_122286126_122289192_122289373_122290217_122290385_122292015_122292126_122292262_122292394_122293008_122293136_122293286
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145910	chr6	-	4185	15	FSM	ENSMUSG00000040669.15	ENSMUST00000161739.8	3893	15	-285	-7	-235	0	multi-exon	FALSE	canonical	3	590	junction_10	176.752392241987	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTACTGCATTCTGCT	8791	False	NA	-12	True	ATTAAA	-41	NA	122316902	122294689	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145931	chr6	-	3871	15	FSM	ENSMUSG00000040669.15	ENSMUST00000160163.8	3289	15	-26	-556	7	3	multi-exon	FALSE	canonical	3	72	junction_12	285.154952506134	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTTGGCCTCCATTGT	9096	False	NA	-28	True	ATTAAA	-25	NA	122316597	122294705	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311924_122312043_122313816_122313975_122316556
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145950	chr6	-	189	1	Intergenic	novelGene_4525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCATCTCACTCAGTGTT	NA	False	NA	NA	False	NA	NA	NA	122346910	122346721	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_122346700_122346900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145975	chr6	+	558	1	FSM	ENSMUSG00000055093.11	ENSMUST00000119780.2	471	1	-40	-47	-40	47	mono-exon	FALSE	NA	NA	NA	NA	NA	828	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTGCTTCACAATGCAG	NA	False	NA	3	True	AATAAA	-29	NA	122433822	122434380	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_122433800_122434400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145980	chr6	+	559	5	NNC	ENSMUSG00000030116.15	novel	2491	4	NA	NA	336	0	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_1	33.0331273118365	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGTTTGCTGATTTCTGGT	8067	False	NA	7	True	AATACA	-18	NA	122499793	122505594	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_+_122499850_122501445_122501470_122502909_122502998_122503745_122503820_122505277
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000145994	chr6	-	1825	2	FSM	ENSMUSG00000030117.6	ENSMUST00000032211.5	2125	2	-56	356	-56	-356	multi-exon	FALSE	canonical	3	704	junction_1	0	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACTTGTTTGTTTTAT	9924	False	NA	-3	True	AATATA	-31	NA	122587102	122582717	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_122584095_122586654
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146000	chr6	+	830	4	FSM	ENSMUSG00000046323.9	ENSMUST00000049644.9	833	4	9	-6	9	6	multi-exon	FALSE	canonical	3	943	junction_3	656.420766141826	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTTTGTAATTTACACAAA	689	False	NA	30	True	AATAAA	-20	NA	122603377	122607237	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_122603570_122605535_122605769_122606259_122606296_122606868
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146013	chr6	-	178	1	Intergenic	novelGene_4526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTGAGACAG	8871	False	NA	NA	False	NA	NA	NA	122626504	122626326	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_122626300_122626500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146024	chr6	+	209	1	Intergenic	novelGene_4527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGCTGAATCATGGATTC	5695	False	NA	NA	False	NA	NA	NA	122660300	122660509	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_122660300_122660500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146028	chr6	+	178	1	Intergenic	novelGene_4528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAGAAAAGACATAAACA	NA	False	NA	NA	False	NA	NA	NA	122678660	122678838	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_122678700_122678800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146057	chr6	+	2183	4	NNC	ENSMUSG00000012396.13	novel	2211	4	NA	NA	25	0	intron_retention	FALSE	canonical	3	354	junction_3	1978.73567938947	321	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCTTATCTTTTGTCCA	NA	False	NA	18	True	AATAAA	-19	NA	122684551	122691592	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_+_122684893_122688496_122688763_122689587_122689675_122690103
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146065	chr6	+	2605	3	ISM	ENSMUSG00000012396.13	ENSMUST00000012540.5	2211	4	26	6	26	-6	intron_retention	FALSE	canonical	3	4542	junction_1	9.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTAGTGGTCTTATCTTT	NA	False	NA	12	True	AATAAA	-13	NA	122684552	122691586	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr6_+_122684893_122688496_122688763_122689587
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146073	chr6	-	207	1	Intergenic	novelGene_4529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAATAAAAATATCCC	NA	False	NA	NA	False	NA	NA	NA	122686540	122686333	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_122686300_122686500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146078	chr6	+	1497	1	NIC	ENSMUSG00000012396.13	novel	1995	5	NA	NA	5569	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCTTATCTTTTGTCCA	NA	False	NA	18	True	AATAAA	-19	NA	122690095	122691592	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_+_122690100_122691600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146093	chr6	-	3927	10	FSM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	37	-5	37	5	multi-exon	FALSE	canonical	3	8407	junction_1	739.604699221896	2989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCCCCCTCTTGTTCTT	9853	False	NA	1	True	AATAAA	-34	NA	122719667	122704762	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146109	chr6	-	6568	8	NIC	ENSMUSG00000003153.11	novel	6253	9	NA	NA	3	2	intron_retention	FALSE	canonical	3	8407	junction_1	792.626864885853	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	8916	False	NA	-19	True	AATAAA	-14	NA	122719478	122704782	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122716953_122717346_122717440_122719334
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146111	chr6	-	4686	9	NIC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	3	2	intron_retention	FALSE	canonical	3	8407	junction_1	771.069296091473	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	8916	False	NA	-19	True	AATAAA	-14	NA	122719478	122704782	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146112	chr6	-	3630	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	-586	2	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_9	2884.34654430676	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	9661	False	NA	-19	True	AATAAA	-14	NA	122720465	122704782	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122720409
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146117	chr6	-	4033	9	NIC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	2	intron_retention	FALSE	canonical	3	8407	junction_1	783.442393782083	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	8917	False	NA	-19	True	AATAAA	-14	NA	122719477	122704782	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122714258_122716791_122716953_122717346_122717440_122719334
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146139	chr6	-	3967	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	-544	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_10	3637.95830102545	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	825	False	NA	-21	True	AATAAA	-12	NA	122779143	122704784	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122774760_122774839_122778826
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146151	chr6	-	179	1	Intergenic	novelGene_4530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAAGAGGCTAA	3982	False	NA	NA	False	NA	NA	NA	122766275	122766096	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_122766100_122766300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146169	chr6	+	2413	8	FSM	ENSMUSG00000030327.9	ENSMUST00000032477.6	2476	8	65	-2	-10	2	multi-exon	FALSE	canonical	3	520	junction_7	29.158959137102	258	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTCATCTTTTAGT	853	False	NA	11	True	ATTAAA	-17	NA	122851497	122865902	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_122851623_122857371_122857473_122857616_122857722_122858459_122858542_122859226_122859336_122859772_122859957_122863710_122863814_122864298
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146184	chr6	-	3057	15	FSM	ENSMUSG00000005069.13	ENSMUST00000080557.12	3073	15	1	15	1	0	multi-exon	FALSE	canonical	3	93	junction_8	13.6099078555564	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACTGACGTGGGTAGGT	NA	False	NA	-16	True	AATAAA	-29	NA	124392025	124373790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124391931
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146186	chr6	-	3158	16	FSM	ENSMUSG00000005069.13	ENSMUST00000035861.6	3139	16	-19	0	11	0	multi-exon	FALSE	canonical	3	29	junction_9	30.6939009504422	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACTGACGTGGGTAGGT	NA	False	NA	-16	True	AATAAA	-29	NA	124392015	124373790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381091_124381203_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124391931
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146200	chr6	-	3974	18	FSM	ENSMUSG00000008153.13	ENSMUST00000008297.5	4014	18	40	0	40	0	multi-exon	FALSE	canonical	2	7	junction_17	12.5334155436701	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGCTTGCTGTTTACC	8480	False	NA	NA	False	AATAAA	-15	NA	124441713	124407717	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_124408692_124408916_124409120_124413776_124413913_124414333_124414480_124415228_124415400_124415717_124415945_124426448_124426598_124426732_124426891_124427664_124427719_124428264_124428428_124433835_124433949_124434814_124435097_124435502_124435689_124436116_124436267_124436724_124436934_124438490_124438687_124439068_124439192_124441379
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146205	chr6	+	232	1	Intergenic	novelGene_4531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAAGGCAAGGGTGG	7393	False	NA	NA	False	NA	NA	NA	124500569	124500801	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_124500600_124500800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146214	chr6	+	2222	13	FSM	ENSMUSG00000004270.14	ENSMUST00000004381.14	2281	13	59	0	59	0	multi-exon	TRUE	canonical	3	738	junction_2	58.4776785524946	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTATACAGTGTTGTCTC	NA	False	NA	NA	False	AATAAA	-25	NA	124640048	124681381	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146228	chr6	-	1053	6	FSM	ENSMUSG00000004268.12	ENSMUST00000004379.8	1034	6	-6	-13	-6	13	multi-exon	FALSE	canonical	3	1245	junction_5	105.298433036774	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGTTTTGAGGGTTC	NA	False	NA	-1	True	TATAAA	-32	NA	124689147	124681330	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_124681622_124681901_124682052_124682120_124682180_124682477_124682620_124682703_124682806_124688838
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146245	chr6	-	2170	16	FSM	ENSMUSG00000004266.16	ENSMUST00000112484.10	2219	16	39	10	-5	3	multi-exon	FALSE	canonical	3	99	junction_10	22.1017847444248	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCCTCCAAGTCTGTGC	8769	False	NA	-10	True	AATAAA	-18	NA	124710078	124697679	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_124697872_124698042_124698186_124698538_124698631_124698725_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705743_124705934_124709262_124709458_124709700_124709824_124709908
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146255	chr6	-	558	3	FSM	ENSMUSG00000072772.4	ENSMUST00000004389.6	863	3	305	0	-4	0	multi-exon	FALSE	canonical	3	807	junction_1	71.5	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTCAGTCATTTGT	9248	False	NA	NA	False	AATAAA	-17	NA	124718032	124716145	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_124716377_124717481_124717659_124717882
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146264	chr6	-	4662	10	FSM	ENSMUSG00000004263.16	ENSMUST00000088357.12	4433	10	-229	0	-229	0	multi-exon	FALSE	canonical	3	30	junction_9	22.6083126851416	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTGTGACGTGTTTTT	8986	False	NA	0	True	AAAACA	-21	NA	124733716	124719506	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682_124722380_124722601_124722825_124722982_124724953_124726198_124726313_124726424_124726563_124726709_124726885_124733258
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146276	chr6	-	2372	12	FSM	ENSMUSG00000004267.17	ENSMUST00000004378.15	2795	12	114	309	-9	1	multi-exon	FALSE	canonical	3	32	junction_11	8.77449346328266	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCCCTTGTCTGAGGACT	9980	False	NA	-5	True	ATTAAA	-18	NA	124746522	124737326	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_124738326_124738610_124738670_124739615_124739725_124739967_124740170_124740689_124740888_124743067_124743291_124743493_124743628_124743995_124744066_124744502_124744562_124744663_124744760_124745200_124745301_124746399
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146281	chr6	+	250	1	Intergenic	novelGene_4532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAAGAGTGGACCTCATG	NA	False	NA	NA	False	AAGAAA	-33	NA	124762436	124762686	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_124762400_124762700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146293	chr6	+	207	1	Intergenic	novelGene_4533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGATTAAGAGGTCAG	NA	False	NA	NA	False	NA	NA	NA	124768355	124768562	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_124768400_124768600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146297	chr6	+	184	1	Intergenic	novelGene_4534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCAAGGGCAGAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124780907	124781091	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_124780900_124781100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146308	chr6	-	1520	7	FSM	ENSMUSG00000023456.17	ENSMUST00000172132.10	1607	7	87	0	-51	0	multi-exon	FALSE	canonical	3	1828	junction_3	39.1652482012647	344	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTGTCCCAGGCTGCC	NA	False	NA	-17	True	AATACA	-22	NA	124791172	124787548	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_124788351_124788479_124788568_124788844_124788931_124789366_124789500_124789583_124789669_124789752_124789877_124790970
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146323	chr6	-	3138	20	FSM	ENSMUSG00000038429.11	ENSMUST00000122110.8	3076	20	-42	-20	7	1	multi-exon	FALSE	canonical	3	759	junction_16	54.5472424788812	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTCAGTTCTTTGGGGG	7863	False	NA	-7	True	AATAAA	-16	NA	124806440	124791980	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146331	chr6	-	3163	20	FSM	ENSMUSG00000038429.11	ENSMUST00000047510.10	3213	20	40	10	-9	9	multi-exon	FALSE	canonical	3	25	junction_5	195.368477767687	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGGCTGACTGGTTTCAG	7896	False	NA	-18	True	AATAAA	-5	NA	124806407	124791991	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795437_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146354	chr6	-	212	1	Intergenic	novelGene_4535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTCCCCATATTTCTAG	9758	False	NA	NA	False	NA	NA	NA	124808288	124808076	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_124808100_124808300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146365	chr6	-	188	1	Intergenic	novelGene_4536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAATGGCCACAGGA	NA	False	NA	NA	False	NA	NA	NA	124829838	124829650	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_124829600_124829800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146383	chr6	+	204	1	Intergenic	novelGene_4537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATTAATCCCAGCAC	NA	False	NA	NA	False	NA	NA	NA	124900610	124900814	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_124900600_124900800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146393	chr6	+	189	1	Intergenic	novelGene_4538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGTCAGGAGAGGTGAAGA	NA	False	NA	NA	False	NA	NA	NA	124901227	124901416	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_124901200_124901400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146400	chr6	+	1536	9	FSM	ENSMUSG00000030120.15	ENSMUST00000180095.4	1475	9	-57	-4	-11	4	multi-exon	FALSE	canonical	3	3449	junction_8	252.103029533562	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGGCTGTACTTTTGC	NA	False	NA	31	True	AATAAA	-21	NA	124908337	124913112	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195_124912409_124912585
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146405	chr6	+	1702	8	ISM	ENSMUSG00000030120.15	ENSMUST00000180095.4	1475	9	-46	-4	0	4	intron_retention	FALSE	canonical	3	3577	junction_4	212.973122765311	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGGCTGTACTTTTGC	NA	False	NA	31	True	AATAAA	-21	NA	124908348	124913112	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146406	chr6	+	1546	9	FSM	ENSMUSG00000030120.15	ENSMUST00000032214.14	1451	9	-90	-5	0	4	multi-exon	FALSE	canonical	3	152	junction_8	1260.71298651795	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGGCTGTACTTTTGC	NA	False	NA	31	True	AATAAA	-21	NA	124908348	124913112	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195_124912409_124912564
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146425	chr6	+	251	1	Intergenic	novelGene_4539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	477	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTTTCTTTCTTTCTT	4334	False	NA	NA	False	NA	NA	NA	124919250	124919501	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_124919200_124919500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146480	chr6	-	1711	8	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	167	junction_7	583.751379843669	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	False	NA	-9	True	AATAAA	-26	NA	124942239	124935778	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942181
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146491	chr6	-	1925	7	ISM	ENSMUSG00000030127.16	ENSMUST00000112439.9	1328	8	26	403	0	0	5prime_fragment	FALSE	canonical	3	1332	junction_6	190.502333027417	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	False	NA	-9	True	AATAAA	-26	NA	124942475	124935778	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr6_-_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146506	chr6	+	175	1	Intergenic	novelGene_4540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGCGTGGTGGCGCACG	NA	False	NA	NA	False	NA	NA	NA	124985218	124985393	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_124985200_124985400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146528	chr6	+	1630	8	FSM	ENSMUSG00000030330.16	ENSMUST00000032480.14	1629	8	0	-1	0	0	multi-exon	FALSE	canonical	3	91	junction_4	19.3527933964298	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTGCGGTGATAGT	7107	False	NA	7	True	AATAAA	-17	NA	125016798	125026228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024289_125024444_125024551_125024755_125024904_125025138_125025201_125025330
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146537	chr6	+	1828	7	ISM	ENSMUSG00000108037.3	ENSMUST00000140883.7	3181	10	-2	2234	-2	-2234	5prime_fragment	FALSE	canonical	3	91	junction_4	20.4857674170793	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTGCGGTGATAGT	7114	False	NA	7	True	AATAAA	-17	NA	125016805	125026228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024289_125024444_125024904_125025138_125025201_125025330
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146547	chr6	-	231	1	Intergenic	novelGene_4541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGAGTGAGGAGGAGACA	7216	False	NA	NA	False	NA	NA	NA	125042634	125042403	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_125042400_125042600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146558	chr6	+	203	1	Intergenic	novelGene_4542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGCAAAACCAGTAGACC	3758	False	NA	NA	False	NA	NA	NA	125043602	125043805	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_125043600_125043800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146582	chr6	+	6459	39	FSM	ENSMUSG00000063870.13	ENSMUST00000112392.8	6652	39	199	-6	3	0	multi-exon	FALSE	canonical	3	85	junction_8	111.644804298587	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTGGTTCTGTGTGGG	1807	False	NA	14	True	AATAAA	-18	NA	125073142	125107554	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079433_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146587	chr6	-	211	1	Intergenic	novelGene_4543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTACGGTAACATCCTTAA	NA	False	NA	NA	False	AATAAA	-18	NA	125108184	125107973	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_125108000_125108200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146614	chr6	-	1368	7	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	245	junction_5	3903.40606251629	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCTTGGTTTTAATGC	NA	False	NA	-15	True	AATAAA	-15	NA	125142567	125138815	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142117_125142275_125142514
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146636	chr6	-	4546	32	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	-24	0	combination_of_known_junctions	TRUE	canonical	3	50	junction_31	121.390529984967	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTGTCCTGGCTGGTC	3582	False	NA	-9	True	AATAAA	-20	NA	125168477	125144969	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168356
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146652	chr6	-	201	1	Intergenic	novelGene_4544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGGACAGGGGTGGGGGT	4851	False	NA	NA	False	NA	NA	NA	125236819	125236618	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_125236600_125236800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146658	chr6	-	291	1	Antisense	novelGene_ENSMUSG00000108129.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAATAAACTAAGAGG	8335	False	NA	NA	False	NA	NA	NA	125245886	125245595	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr6_-_125245600_125245900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146666	chr6	-	1554	5	FSM	ENSMUSG00000067702.6	ENSMUST00000088246.6	1509	5	-40	-5	-40	5	multi-exon	FALSE	canonical	3	590	junction_2	43.4453679924569	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCTCTAGTGTGTTGT	3421	False	NA	-3	True	AATAAA	-33	NA	125263045	125255231	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_125255618_125257932_125258614_125259315_125259465_125259718_125259942_125262930
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146689	chr6	+	241	1	Intergenic	novelGene_4545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTTAAAAAAAAAAGAAGA	9050	False	NA	NA	False	AATAAA	-11	NA	125371009	125371250	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_125371000_125371200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146697	chr6	+	211	1	Intergenic	novelGene_4546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	251	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGCAGCAGATGCAGATA	NA	False	NA	62	True	NA	NA	NA	125389666	125389877	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_125389700_125389900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146704	chr6	+	208	1	Intergenic	novelGene_4547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATTGTATTGTATCT	NA	False	NA	NA	False	TTTAAA	-4	NA	125390770	125390978	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_125390800_125391000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146710	chr6	+	190	1	Intergenic	novelGene_4548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	216	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTATTTGTATCCATATG	759	False	NA	NA	False	NA	NA	NA	125433537	125433727	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_125433500_125433700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146731	chr6	+	206	1	Intergenic	novelGene_4549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGGTCATGTGCTTTAA	3235	False	NA	17	True	NA	NA	NA	125556201	125556407	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_125556200_125556400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146743	chr6	-	208	1	Intergenic	novelGene_4550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAGCGTGGATTGAGA	NA	False	NA	NA	False	NA	NA	NA	126786105	126785897	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_126785900_126786100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146752	chr6	-	1246	11	FSM	ENSMUSG00000000399.11	ENSMUST00000205002.3	1445	11	-28	227	-17	48	multi-exon	FALSE	canonical	3	1115	junction_7	83.3223259396904	257	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTTCTTGACTGATCA	NA	False	NA	0	True	ATTAAA	-26	NA	126826116	126798910	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_126799153_126801898_126801966_126804502_126804599_126809434_126809512_126811391_126811460_126813181_126813285_126817460_126817603_126819083_126819176_126821270_126821369_126821753_126821925_126826026
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146764	chr6	-	1881	9	FSM	ENSMUSG00000030346.17	ENSMUST00000112221.8	1871	9	-10	0	-10	0	multi-exon	FALSE	canonical	3	112	junction_4	48.7748334184751	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATGCCTCGCCTAGTT	5255	False	NA	-5	True	AATAAA	-21	NA	126916560	126900377	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904654_126905103_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146780	chr6	+	2154	14	FSM	ENSMUSG00000030347.7	ENSMUST00000032497.7	2501	14	0	347	0	6	multi-exon	FALSE	canonical	3	74	junction_10	14.682034265643	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATGTGAAAATGTTTTT	NA	False	NA	NA	False	TATAAA	-1	NA	126916928	126952583	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_126916990_126919274_126919470_126921754_126921901_126923439_126923622_126927020_126927121_126927237_126927360_126931697_126931805_126932097_126932296_126932811_126932941_126938928_126939004_126943842_126944046_126950518_126950577_126951449_126951518_126952073
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146793	chr6	-	3697	6	FSM	ENSMUSG00000038028.10	ENSMUST00000039913.9	3651	6	-46	0	-39	0	multi-exon	FALSE	canonical	3	974	junction_4	62.3903838744401	312	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTAGGTCTGTTCAGTGT	NA	False	NA	NA	False	AATAAA	-22	NA	127086559	127062078	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_127065266_127066155_127066267_127068146_127068225_127069583_127069706_127078811_127078850_127086398
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146815	chr6	-	2718	10	FSM	ENSMUSG00000030350.9	ENSMUST00000032500.9	2724	10	6	0	6	0	multi-exon	FALSE	canonical	1	4	junction_7	3.18948890986829	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGAGTACCTCTTTCTT	NA	False	NA	2	True	AATAAA	-17	NA	127746429	127665973	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_127666872_127667572_127667695_127674647_127674799_127680839_127680956_127688104_127688193_127688744_127688888_127703487_127703552_127706372_127706529_127709597_127709784_127745635
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146828	chr6	+	192	1	Intergenic	novelGene_4551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAACCACGGAGAGA	NA	False	NA	NA	False	NA	NA	NA	128095102	128095294	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_128095100_128095300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146836	chr6	+	194	1	Intergenic	novelGene_4552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGAATACTGCTGAGCCA	NA	False	NA	NA	False	NA	NA	NA	128184730	128184924	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_128184700_128184900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146851	chr6	-	3361	11	FSM	ENSMUSG00000001521.13	ENSMUST00000001562.9	3374	11	13	0	3	0	multi-exon	FALSE	canonical	3	32	junction_5	4.7169905660283	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGCTTTCCCAGAATACC	7504	False	NA	-20	True	AATAAA	-18	NA	128332801	128298123	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_128300176_128300960_128301133_128301942_128302042_128302839_128302955_128303734_128303848_128304502_128304701_128304918_128305041_128310795_128310973_128311400_128311561_128314696_128314749_128332700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146862	chr6	-	1135	3	FSM	ENSMUSG00000048668.17	ENSMUST00000112151.2	1108	3	-22	-5	21	0	multi-exon	FALSE	canonical	3	139	junction_2	100.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCCTCGTGCCCATCTA	452	False	NA	-7	True	AATAAA	-41	NA	128339853	128334322	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_128335157_128336068_128336318_128339801
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146880	chr6	+	4606	8	FSM	ENSMUSG00000001517.15	ENSMUST00000073316.13	4652	8	-207	253	-207	-253	multi-exon	FALSE	canonical	3	86	junction_6	39.2423136890967	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCCTGGAGGTGATTTA	NA	False	NA	15	True	TATAAA	-28	NA	128339722	128352856	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128348930_128348976_128349496_128349567_128349739
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146896	chr6	-	189	1	Intergenic	novelGene_4553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACTTATTTTTTAAAAAGA	NA	False	NA	0	True	AATACA	-8	NA	128365591	128365402	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_128365400_128365600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146906	chr6	-	2319	12	FSM	ENSMUSG00000001518.13	ENSMUST00000001559.11	2320	12	1	0	0	0	multi-exon	FALSE	canonical	3	237	junction_3	19.6628609101919	273	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCTCTCCAATCTGGAC	NA	False	NA	0	True	AATAAA	-24	NA	128401893	128386406	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128392858_128393028_128393219_128393262_128394579_128394676_128401680
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146921	chr6	-	2251	10	FSM	ENSMUSG00000030357.11	ENSMUST00000032508.11	2217	10	-30	-4	-30	4	multi-exon	FALSE	canonical	3	5250	junction_7	195.172162050601	1603	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCAGGCAACCCTTTAT	9239	False	NA	-17	True	AATAAA	-20	NA	128415670	128407061	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665_128410757_128411267_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146929	chr6	-	209	1	Intergenic	novelGene_4554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTAATTGATGAAACATGA	NA	False	NA	NA	False	NA	NA	NA	128444154	128443945	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_128443900_128444200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146932	chr6	+	167	1	Intergenic	novelGene_4555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGCAAAAAAGAAGAGCCTT	NA	False	NA	NA	False	NA	NA	NA	128457370	128457537	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_128457400_128457500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146940	chr6	-	182	1	Intergenic	novelGene_4556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGAGAGACTGGGAAA	NA	False	NA	NA	False	NA	NA	NA	128460414	128460232	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_128460200_128460400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146947	chr6	-	186	1	Intergenic	novelGene_4557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGTTTGGAAAAAAGTACAA	1015	False	NA	NA	False	NA	NA	NA	128599050	128598864	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_128598900_128599000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146959	chr6	+	2279	1	FSM	ENSMUSG00000037827.6	ENSMUST00000036712.6	1479	1	-73	-727	-73	727	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGACTCCACCTAAGATT	NA	False	NA	NA	False	NA	NA	NA	128621802	128624081	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_128621800_128624100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146964	chr6	-	187	1	Intergenic	novelGene_4558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATAAATCCCGTCTCTCT	NA	False	NA	NA	False	AATAAA	-2	NA	128737139	128736952	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_128737000_128737100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146977	chr6	+	189	1	Intergenic	novelGene_4559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATGATTTAAATAAAGCAA	NA	False	NA	NA	False	GATAAA	-45	NA	128816011	128816200	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_128816000_128816200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000146996	chr6	-	615	5	FSM	ENSMUSG00000030188.13	ENSMUST00000032307.12	767	5	27	125	27	0	multi-exon	FALSE	canonical	2	356	junction_3	64.3059095262636	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTTACATGGTTTTTA	NA	False	NA	NA	False	TATAAA	-19	NA	131270180	131261475	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_131261692_131262605_131262689_131264998_131265110_131266351_131266411_131270034
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147016	chr6	-	1693	9	FSM	ENSMUSG00000030189.16	ENSMUST00000087865.4	1684	9	-9	0	-9	0	multi-exon	FALSE	canonical	3	624	junction_4	774.912807595151	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTGTAACTAGTGTGTA	4924	False	NA	-9	True	AATAAA	-21	NA	131365448	131341817	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131356320_131356444_131357838_131357929_131360463_131360498_131361465_131361530_131364980
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147035	chr6	-	185	1	Intergenic	novelGene_4560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGACAGTAGAGTGGAGG	8504	False	NA	NA	False	NA	NA	NA	133841376	133841191	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_133841200_133841400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147044	chr6	+	5392	8	FSM	ENSMUSG00000030199.17	ENSMUST00000081028.13	5545	8	156	-3	-113	0	multi-exon	FALSE	canonical	3	29	junction_1	18.3358687176979	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTCCCAAGTCTCTGTT	NA	False	NA	NA	False	AATAAA	-22	NA	134012818	134247121	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_134013102_134114247_134114381_134199827_134199993_134210481_134210617_134225236_134225768_134238652_134238796_134239981_134240083_134243220
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147069	chr6	+	197	1	Intergenic	novelGene_4561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	459	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCAGAGCCCGGCAGTGG	NA	False	NA	NA	False	NA	NA	NA	134571184	134571381	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_134571200_134571400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147084	chr6	+	184	1	Intergenic	novelGene_4562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCAAGTCATCTTGTTAT	6503	False	NA	NA	False	NA	NA	NA	134647611	134647795	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_134647600_134647800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147088	chr6	-	5215	7	FSM	ENSMUSG00000030203.18	ENSMUST00000100857.10	5104	7	-111	0	-111	0	multi-exon	FALSE	canonical	3	50	junction_6	14.7309198626562	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTGTGAGACGTGGCT	NA	False	NA	-3	True	AATAAA	-24	NA	134769699	134692435	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_134696015_134697456_134697581_134702798_134702959_134716774_134716939_134735581_134735721_134737808_134738398_134769239
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147101	chr6	+	196	1	Intergenic	novelGene_4563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGTTTACATTTCTAA	NA	False	NA	NA	False	NA	NA	NA	134736617	134736813	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_134736600_134736800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147111	chr6	+	191	1	Intergenic	novelGene_4564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGGGCCGGGCGTGGTG	NA	False	NA	NA	False	NA	NA	NA	134752834	134753025	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_134752800_134753000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147136	chr6	+	1301	1	Intergenic	novelGene_4565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCCCCAAAAAAAACCCTAA	3405	False	NA	NA	False	NA	NA	NA	134861789	134863090	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_134861800_134863100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147141	chr6	+	404	2	FSM	ENSMUSG00000098318.8	ENSMUST00000183867.7	5662	2	36	5222	-5	1	multi-exon	FALSE	canonical	3	145	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTGTTTCTGGGCTCTGT	8001	False	NA	25	True	NA	NA	NA	134906090	134928539	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_134906224_134928268
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147147	chr6	+	1762	12	FSM	ENSMUSG00000030204.11	ENSMUST00000032326.11	1764	12	2	0	2	0	multi-exon	TRUE	canonical	3	485	junction_5	30.2182146373304	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTGTGTGTGCACT	6576	False	NA	20	True	ATTAAA	-20	NA	134988576	135000739	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992611_134992784_134992904_134993544_134993617_134994083_134994201_134995013_134995161_134995936_134996075_134997578_134997650_134998411_134998542_135000241
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147154	chr6	+	2503	11	NIC	ENSMUSG00000030204.11	novel	1764	12	NA	NA	-1	0	intron_retention	FALSE	canonical	3	485	junction_5	31.3687742827162	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGTCTGTGTGTG	6593	False	NA	16	True	ATTAAA	-16	NA	134988593	135000735	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992611_134992784_134992904_134993544_134993617_134994083_134994201_134995013_134995161_134995936_134996075_134997578_134998542_135000241
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147164	chr6	+	2063	4	FSM	ENSMUSG00000046733.8	ENSMUST00000050104.8	2083	4	20	0	20	0	multi-exon	FALSE	canonical	3	121	junction_1	5.71547606649408	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTTATTTATTTATTT	NA	False	NA	32	True	AATAAA	-32	NA	135042668	135061707	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_135042774_135055543_135056483_135060440_135060497_135060744
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147170	chr6	-	1042	4	FSM	ENSMUSG00000042770.9	ENSMUST00000045855.9	1058	4	19	-3	-4	3	multi-exon	FALSE	canonical	3	260	junction_1	18.8738502225228	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTTTTAAATTATTTCC	NA	False	NA	-26	True	AATACA	-23	NA	135145194	135114516	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_135115062_135129818_135130000_135132148_135132288_135145017
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147178	chr6	+	4156	13	FSM	ENSMUSG00000030207.16	ENSMUST00000111915.8	4221	13	65	0	65	0	multi-exon	TRUE	canonical	3	64	junction_6	10.7558123821495	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGTGTCCTTTTCTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	135175039	135213240	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_135175100_135186030_135186430_135188832_135188932_135193883_135194076_135195676_135195808_135202137_135202286_135202653_135202796_135203847_135203992_135204150_135204233_135205410_135205567_135208618_135208737_135210253_135210475_135210976
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147190	chr6	-	203	1	Intergenic	novelGene_4566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGTAAGAAGAGGAAGAAAAG	7887	False	NA	NA	False	NA	NA	NA	135246456	135246253	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_135246300_135246500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147194	chr6	+	2698	5	FSM	ENSMUSG00000030208.16	ENSMUST00000032330.16	2721	5	23	0	23	0	multi-exon	FALSE	canonical	3	40	junction_2	1.6393596310755	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGACTGTTTTCTT	NA	False	NA	7	True	TATAAA	-20	NA	135339951	135360171	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_135340101_135354175_135354287_135356898_135356996_135357098_135357240_135357971
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147203	chr6	+	207	1	Intergenic	novelGene_4567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTAACTCCACACACTGG	NA	False	NA	NA	False	NA	NA	NA	136343646	136343853	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_136343600_136343900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147211	chr6	+	193	1	Intergenic	novelGene_4568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTAGTGTGGGCAACTAAC	NA	False	NA	NA	False	NA	NA	NA	136434827	136435020	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_136434800_136435000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147223	chr6	+	4250	15	NIC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	-15	-1251	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	55.9380123394619	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTCCCTGAACAATTCAA	7072	False	NA	10	True	AATAAA	-18	NA	136495823	136584066	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_+_136495962_136536761_136538438_136540757_136540845_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147233	chr6	+	4263	15	FSM	ENSMUSG00000030213.13	ENSMUST00000032335.13	8059	15	43	3753	-1	-1210	multi-exon	FALSE	canonical	3	154	junction_2	25.3043716477963	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTATTCCTTGCTTTTTG	7091	False	NA	51	True	NA	NA	NA	136495842	136584107	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_136495962_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147247	chr6	+	1836	1	FSM	ENSMUSG00000060032.7	ENSMUST00000074556.7	1831	1	-9	4	-9	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCTTGACAGTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	136785232	136787068	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_136785200_136787100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147253	chr6	-	2699	12	FSM	ENSMUSG00000030216.13	ENSMUST00000116514.4	2739	12	41	-1	41	1	multi-exon	FALSE	canonical	3	1089	junction_11	207.479880534104	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGTTTGTGTAATGT	2873	False	NA	0	True	AATAAA	-20	NA	136805190	136790650	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136801422_136802513_136802546_136802998_136803108_136805017
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147259	chr6	-	2678	12	NNC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	3	247	junction_11	431.640078103034	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGTGTTTGTGTAATG	2891	False	NA	-1	True	AATAAA	-19	NA	136805172	136790651	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136801422_136802513_136802546_136802998_136803108_136805019
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147276	chr6	-	190	1	Intergenic	novelGene_4569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAGGCTGGAAGATAAGA	NA	False	NA	NA	False	NA	NA	NA	136862046	136861856	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_136861900_136862000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147283	chr6	+	190	1	Intergenic	novelGene_4570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATCTACTTAGTTA	305	False	NA	NA	False	NA	NA	NA	136954830	136955020	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_136954800_136955000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147299	chr6	-	185	1	Intergenic	novelGene_4571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTCCTCTTATGTTGA	NA	False	NA	NA	False	NA	NA	NA	137378402	137378217	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_137378200_137378400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147316	chr6	+	202	1	Intergenic	novelGene_4572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGTCCCAATAGAACAAA	NA	False	NA	NA	False	NA	NA	NA	137643096	137643298	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_137643100_137643300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147318	chr6	+	2643	10	FSM	ENSMUSG00000030224.11	ENSMUST00000064910.7	2650	10	7	0	7	0	multi-exon	FALSE	canonical	3	757	junction_9	58.2073772423402	529	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGCTTGGATTCCTGAAGT	NA	False	NA	23	True	AATAAA	-26	NA	137712082	137728930	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_137712465_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147329	chr6	+	1758	9	FSM	ENSMUSG00000030225.12	ENSMUST00000087675.9	1729	9	-27	-2	-15	2	multi-exon	FALSE	canonical	3	541	junction_6	37.3511629671688	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTTGTTTATTTTCGG	NA	False	NA	22	True	AATACA	-22	NA	137731528	137814894	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_137731637_137755121_137755220_137756507_137756656_137757727_137757824_137759926_137760062_137773751_137773881_137807190_137807304_137813731_137813882_137814113
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147339	chr6	+	164	1	Intergenic	novelGene_4573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCAGAGCAAACAGTGAG	NA	False	NA	NA	False	NA	NA	NA	138948356	138948520	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_138948400_138948500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147343	chr6	+	193	1	Intergenic	novelGene_4574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAATTAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	140309245	140309438	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_140309200_140309400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147351	chr6	+	4428	26	NIC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-135	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_24	11.9895954894233	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGGTGTTAGAATCTTT	NA	False	NA	17	True	AATAAA	-17	NA	140369644	140542836	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525155_140525203_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140539280_140539384_140541974
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147365	chr6	+	189	1	Intergenic	novelGene_4575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATATTTTATACTAATAT	NA	False	NA	NA	False	NA	NA	NA	140377533	140377722	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_140377500_140377700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147368	chr6	+	178	1	Intergenic	novelGene_4576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAAAGAAGGC	NA	False	NA	NA	False	NA	NA	NA	140392702	140392880	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_140392700_140392900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147375	chr6	+	244	1	Intergenic	novelGene_4577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTTATTAGGATGAGCT	NA	False	NA	NA	False	NA	NA	NA	140475350	140475594	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_140475400_140475600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147399	chr6	+	3187	9	NIC	ENSMUSG00000030232.19	novel	2575	9	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	123	junction_8	72.0736385580747	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTCAAATTGTAACAATTC	NA	False	NA	NA	False	AATAAA	-20	NA	140569231	140598552	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140597041
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147410	chr6	+	173	1	Intergenic	novelGene_4578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAACAGAATATGTAAAAC	2543	False	NA	NA	False	NA	NA	NA	140627301	140627474	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_140627300_140627500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147416	chr6	+	188	1	Intergenic	novelGene_4579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATCTCTGGGAACACACAT	NA	False	NA	NA	False	NA	NA	NA	141908576	141908764	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_141908600_141908800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147421	chr6	+	1726	12	FSM	ENSMUSG00000041671.14	ENSMUST00000041852.8	2831	12	3	1102	3	104	multi-exon	FALSE	canonical	3	42	junction_5	7.76088944378656	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGTTTAATGACTCATTTG	NA	False	NA	14	True	AATAAA	-19	NA	142291382	142307881	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_142291534_142293283_142293365_142294248_142294369_142296787_142296917_142299250_142299325_142300350_142300512_142302208_142302310_142303105_142303239_142304124_142304238_142304761_142304885_142306584_142306723_142307479
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147433	chr6	-	2854	15	FSM	ENSMUSG00000030243.17	ENSMUST00000111803.9	3389	15	13	522	0	223	multi-exon	TRUE	canonical	3	113	junction_14	18.9118524546197	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCGTTTCACCAATTAAGA	6193	False	NA	0	True	ATTAAA	-21	NA	142332800	142307623	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147445	chr6	+	2782	6	NNC	ENSMUSG00000030245.11	novel	2818	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	283.233190145505	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGTCAAGTTTATCTT	NA	False	NA	25	True	AATAAA	-19	NA	142332946	142349584	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_+_142333096_142338055_142338148_142339653_142339729_142339832_142339901_142341913_142341996_142347268
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147453	chr6	-	173	1	Intergenic	novelGene_4580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAAGAATTTTTT	NA	False	NA	NA	False	NA	NA	NA	142420453	142420280	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_142420300_142420500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147460	chr6	-	2775	7	NIC	ENSMUSG00000030246.13	novel	1304	8	NA	NA	-2	0	intron_retention	FALSE	canonical	3	685	junction_1	70.5275753793429	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTGCCTTTTTCTC	NA	False	NA	-4	True	AATAAA	-19	NA	142453671	142435974	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_142436331_142438218_142439944_142441293_142441468_142444230_142444405_142447065_142447184_142451137_142451273_142453578
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147464	chr6	-	1304	8	FSM	ENSMUSG00000030246.13	ENSMUST00000239395.2	1304	8	0	0	0	0	multi-exon	FALSE	canonical	3	685	junction_1	65.6636450839754	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTGCCTTTTTCTC	NA	False	NA	-4	True	AATAAA	-19	NA	142453683	142435974	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_142436331_142438218_142438343_142439825_142439944_142441293_142441468_142444230_142444405_142447065_142447184_142451137_142451273_142453578
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147475	chr6	+	1784	8	FSM	ENSMUSG00000030282.15	ENSMUST00000032419.9	1760	8	-24	0	-24	0	multi-exon	FALSE	canonical	3	681	junction_7	54.6573743554204	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGTACTGTAAGACCT	NA	False	NA	33	True	AATAAA	-22	NA	142702387	142721440	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_142702753_142710012_142710156_142710279_142710436_142713529_142713664_142716248_142716344_142716891_142717064_142717840_142717995_142720875
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147483	chr6	+	3535	7	ISM	ENSMUSG00000030282.15	ENSMUST00000032419.9	1760	8	56	1050	-12	0	5prime_fragment	FALSE	canonical	3	691	junction_3	53.4189417092227	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGTGAGTTTGATC	NA	False	NA	9	True	ATTAAA	-20	NA	142702467	142720390	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr6_+_142702753_142710012_142710156_142710279_142710436_142713529_142713664_142716248_142716344_142716891_142717064_142717840
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147493	chr6	-	4428	27	NIC	ENSMUSG00000030279.16	novel	3494	26	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_4	21.2642225290113	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTAACTCTTTGCCTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	143045821	142956650	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147504	chr6	-	4316	26	NIC	ENSMUSG00000030279.16	novel	3494	26	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	101	junction_4	20.7068684257181	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTAACTCTTTGCCTC	NA	False	NA	NA	False	AATAAA	-17	NA	143045575	142956652	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147506	chr6	-	4268	25	FSM	ENSMUSG00000030279.16	ENSMUST00000171349.8	4292	25	17	7	0	1	multi-exon	FALSE	canonical	3	38	junction_3	28.9653768412489	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTAACTCTTTGCCTC	NA	False	NA	NA	False	AATAAA	-17	NA	143045816	142956652	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_142957863_142958927_142959075_142963608_142963800_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147517	chr6	-	212	1	Intergenic	novelGene_4581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTACTGCTGACCTGGAA	NA	False	NA	NA	False	AAGAAA	-12	NA	142969073	142968861	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_142968900_142969100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147525	chr6	+	6447	8	FSM	ENSMUSG00000030275.7	ENSMUST00000032413.7	6433	8	-14	0	-5	0	multi-exon	FALSE	canonical	3	230	junction_4	19.0541655416813	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCCATGTGGTTCATAC	NA	False	NA	25	True	AATAAA	-38	NA	143112941	143154272	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_143113363_143126312_143126573_143130298_143130440_143132217_143132361_143140957_143141042_143143130_143143292_143148804_143148879_143149109
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147536	chr6	+	1598	1	NIC	ENSMUSG00000030275.7	novel	1791	8	NA	NA	-2	-23433	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTACTAATTAAAGGCAGT	NA	False	NA	NA	False	AATAAA	-19	NA	143112977	143114575	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_+_143113000_143114600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147539	chr6	-	253	1	Intergenic	novelGene_4582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAGTATTTTTTTAAAA	NA	False	NA	NA	False	GATAAA	-8	NA	143147923	143147670	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_143147700_143147900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147569	chr6	-	2403	10	NIC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	86	5	combination_of_known_splicesites	FALSE	canonical	3	151	junction_9	1239.05241571488	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGATTTGAATCTTAAT	8571	False	NA	-19	True	AATAAA	-21	NA	145021824	144944878	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_145021614
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147572	chr6	-	1998	8	NIC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	131	5	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	1423.55806029133	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGATTTGAATCTTAAT	8616	False	NA	-19	True	AATAAA	-21	NA	145021779	144944878	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144993017_144993090_145021614
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147575	chr6	-	2478	11	NIC	ENSMUSG00000030268.18	novel	7833	11	NA	NA	9	5	combination_of_known_junctions	FALSE	canonical	3	210	junction_10	1167.49801284627	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGATTTGAATCTTAAT	NA	False	NA	-19	True	AATAAA	-21	NA	144993378	144944878	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_144993165
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147579	chr6	-	2523	12	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	130	5	at_least_one_novel_splicesite	FALSE	canonical	3	123	junction_11	1507.73835882678	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGATTTGAATCTTAAT	8615	False	NA	-19	True	AATAAA	-21	NA	145021780	144944878	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145002586_145002679_145021614
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147584	chr6	-	2376	11	NNC	ENSMUSG00000030268.18	novel	7833	11	NA	NA	3152	5	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_10	1224.34884326323	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGATTTGAATCTTAAT	9873	False	NA	-19	True	AATAAA	-21	NA	145018758	144944878	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145018647
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147633	chr6	+	1341	3	FSM	ENSMUSG00000040370.14	ENSMUST00000111726.10	1374	3	41	-8	-3	8	multi-exon	FALSE	canonical	3	230	junction_1	45.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTCTTTATCAACTACCA	NA	False	NA	22	True	NA	NA	NA	145156922	145162273	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_145156979_145160909_145160998_145161076
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147636	chr6	+	1481	3	NNC	ENSMUSG00000040370.14	novel	1374	3	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	canonical	3	31	junction_1	145	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAAAGGAGTCTTTATC	NA	False	NA	14	True	NA	NA	NA	145156922	145162265	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr6_+_145157127_145160909_145160998_145161076
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147647	chr6	-	4692	5	FSM	ENSMUSG00000030265.15	ENSMUST00000032399.12	4678	5	-14	0	-14	0	multi-exon	FALSE	canonical	3	862	junction_1	85.6661397519463	448	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTAATTATGTAGTTTT	NA	False	NA	-8	True	AATAAA	-22	NA	145195979	145162424	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_145166451_145177820_145177981_145179973_145180153_145192420_145192543_145195774
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147661	chr6	+	213	1	Intergenic	novelGene_4583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCCCAAGGATACACTCA	NA	False	NA	NA	False	AAAAAG	-15	NA	145203733	145203946	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_145203700_145203900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147672	chr6	+	1558	5	FSM	ENSMUSG00000067338.7	ENSMUST00000087445.7	1775	5	222	-5	222	5	multi-exon	FALSE	canonical	3	1181	junction_3	43.6312674580971	324	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCCTGTGTGCTGTACT	NA	False	NA	21	True	AATAAA	-41	NA	145561704	145567210	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_145561816_145563958_145564182_145564457_145564607_145564908_145565590_145566816
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147681	chr6	-	2996	17	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	201	junction_1	24.9699819783675	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCGGAGTGTTACTTTAG	NA	False	NA	-2	True	AATAAA	-26	NA	146479348	146451129	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_146451484_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147710	chr6	+	2704	6	FSM	ENSMUSG00000040242.15	ENSMUST00000067404.13	2766	6	62	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	164.658434342125	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTCAGGGTTAATTT	NA	False	NA	29	True	AATAAA	-20	NA	146479418	146500696	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146496673_146496788_146498792
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147714	chr6	+	2817	7	FSM	ENSMUSG00000040242.15	ENSMUST00000111663.9	2880	7	63	0	1	0	multi-exon	FALSE	canonical	0	0	junction_3	146.964470385041	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTCAGGGTTAATTT	NA	False	NA	29	True	AATAAA	-20	NA	146479419	146500696	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146494131_146494246_146496673_146496788_146498792
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147720	chr6	+	910	5	FSM	ENSMUSG00000040242.15	ENSMUST00000058245.5	918	5	7	1	7	-1	multi-exon	FALSE	canonical	0	0	junction_3	170.445005793658	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTGTGCTTTTCATGG	NA	False	NA	NA	False	AATAAA	-15	NA	146479425	146494362	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146494131
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147729	chr6	-	3235	12	FSM	ENSMUSG00000040234.17	ENSMUST00000037709.16	3241	12	7	-1	7	1	multi-exon	FALSE	canonical	3	689	junction_8	114.912830779186	770	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATGTCCTCCTTATTAG	NA	False	NA	NA	False	AATAAA	-21	NA	146536088	146503848	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527593_146527749_146535883
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147741	chr6	+	782	4	FSM	ENSMUSG00000030291.13	ENSMUST00000032429.9	814	4	32	0	0	0	multi-exon	FALSE	canonical	3	254	junction_3	35.4902177445498	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTTTTTGTTTGTCCTT	NA	False	NA	36	True	AATAAA	-21	NA	146544076	146552100	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_146544151_146549662_146549778_146550647_146550749_146551608
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147752	chr6	+	178	1	Intergenic	novelGene_4584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGGTTGTTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	146563606	146563784	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_146563600_146563800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147775	chr6	+	4863	27	FSM	ENSMUSG00000016487.16	ENSMUST00000016631.14	4851	27	-6	-6	-6	6	multi-exon	TRUE	canonical	1	79	junction_5	45.7139938177494	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCATTGTTTCTTTG	7533	False	NA	19	True	AATAAA	-23	NA	146789978	146933529	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147785	chr6	+	4880	28	NIC	ENSMUSG00000016487.16	novel	4782	28	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	35	junction_15	73.2858432087318	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTATTTGTCATTGTT	7540	False	NA	13	True	AATAAA	-17	NA	146789985	146933523	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146914415_146914446_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147788	chr6	+	5005	28	NIC	ENSMUSG00000016487.16	novel	4782	28	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	49	junction_2	70.7910234325529	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTATTTGTCATTGTT	7546	False	NA	13	True	AATAAA	-17	NA	146789991	146933523	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_+_146790182_146819245_146819407_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147801	chr6	+	1090	8	FSM	ENSMUSG00000040112.10	ENSMUST00000036111.10	4162	8	-15	3087	-15	5	multi-exon	FALSE	canonical	3	595	junction_4	51.0230040155958	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTCTTACGTCAGGTGA	NA	False	NA	17	True	TATAAA	-19	NA	146944246	146972402	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_146944399_146947608_146947647_146949631_146949800_146951325_146951387_146957349_146957490_146961639_146961750_146962920_146962991_146972051
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147812	chr6	+	187	1	Intergenic	novelGene_4585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGCTCCAACCACAGACAA	NA	False	NA	NA	False	NA	NA	NA	146984519	146984706	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_146984500_146984700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147819	chr6	+	2295	13	NIC	ENSMUSG00000030301.18	novel	2459	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	22.1514672200286	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGATTGTCATGTTTTTG	NA	False	NA	17	True	AATAAA	-18	NA	147377368	147534110	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_+_147377394_147409281_147409326_147412321_147412401_147435526_147435688_147437085_147437290_147438873_147438979_147464132_147464211_147476970_147477079_147491884_147491978_147492066_147492136_147493536_147493714_147508379_147508494_147533072
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147822	chr6	+	2459	13	FSM	ENSMUSG00000030301.18	ENSMUST00000032441.14	2459	13	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	9.07683253612673	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGATTGTCATGTTTTTG	NA	False	NA	17	True	AATAAA	-18	NA	147377368	147534110	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_+_147377558_147409281_147409326_147412321_147412401_147435526_147435688_147437085_147437290_147438873_147438979_147464132_147464211_147476970_147477079_147491884_147491978_147492066_147492136_147493536_147493714_147508379_147508494_147533072
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147834	chr6	-	3873	14	FSM	ENSMUSG00000030304.12	ENSMUST00000136008.8	4174	14	320	-19	-32	19	multi-exon	FALSE	canonical	3	798	junction_5	68.0164442351299	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATCAACCATAGCCTTAA	NA	False	NA	NA	False	NA	NA	NA	148113552	148080557	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147852	chr6	-	2213	14	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-6	33	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	256.271329030074	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAACTAGTCTAGACTT	NA	False	NA	-32	True	AATAAA	-15	NA	148113526	148082774	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104624_148106273_148106383_148108030_148108174_148113467
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147857	chr6	-	1553	13	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	0	33	combination_of_known_splicesites	FALSE	canonical	3	36	junction_9	251.686423065599	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAACTAGTCTAGACTT	NA	False	NA	-32	True	AATAAA	-15	NA	148113520	148082774	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148103993_148104041_148106273_148106383_148108030_148108174_148113467
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147872	chr6	-	205	1	Intergenic	novelGene_4586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGGGTCTGATCACCT	NA	False	NA	NA	False	NA	NA	NA	148660434	148660229	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_148660200_148660400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147886	chr6	-	5374	25	FSM	ENSMUSG00000040029.16	ENSMUST00000048418.14	5360	25	-14	0	-14	0	multi-exon	TRUE	canonical	3	188	junction_1	23.3505516827524	231	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTCTGCTCTATGGGAT	NA	False	NA	-1	True	AATAAA	-27	NA	148732979	148672180	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_148674308_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147897	chr6	-	3642	19	FSM	ENSMUSG00000030309.17	ENSMUST00000111569.9	3697	19	55	0	-20	0	multi-exon	FALSE	canonical	3	65	junction_10	9.04805415272352	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTTGTTTCTGTTTG	NA	False	NA	-1	True	AATAAA	-14	NA	148797680	148743989	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796655_148797515
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147899	chr6	-	2985	18	FSM	ENSMUSG00000030309.17	ENSMUST00000072324.12	2952	18	-32	-1	-20	0	multi-exon	FALSE	canonical	3	19	junction_10	17.2566621205624	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTTGTTTCTGTTTG	NA	False	NA	-1	True	AATAAA	-14	NA	148797680	148743989	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796655_148797515
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147914	chr6	+	203	1	Intergenic	novelGene_4587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCAACATCAAGTACTTTT	NA	False	NA	NA	False	NA	NA	NA	148748727	148748930	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_148748700_148748900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147932	chr6	-	2632	6	NIC	ENSMUSG00000039985.15	novel	2737	6	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_5	837.245818144229	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCATGACTTTGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	148847677	148822554	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148847544
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147933	chr6	-	2593	6	FSM	ENSMUSG00000039985.15	ENSMUST00000111562.8	906	6	-31	-1656	-17	0	multi-exon	FALSE	canonical	3	74	junction_5	856.005280357545	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCATGACTTTGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	148846341	148822554	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148846247
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147945	chr6	-	2681	6	FSM	ENSMUSG00000039985.15	ENSMUST00000081956.12	2737	6	56	0	42	0	multi-exon	FALSE	canonical	3	93	junction_5	848.577303490967	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCATGACTTTGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	148846268	148822554	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148846086
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147962	chr6	+	215	1	Intergenic	novelGene_4588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAATTTGCTGTTTCTTGC	NA	False	NA	NA	False	NA	NA	NA	148830832	148831047	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_148830800_148831000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147972	chr6	+	234	1	Intergenic	novelGene_4589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	379	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTTTTTCCAGCCAGC	NA	False	NA	NA	False	NA	NA	NA	148849656	148849890	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_148849700_148849900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147984	chr6	+	193	1	Intergenic	novelGene_4590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	148870116	148870309	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_148870100_148870300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147987	chr6	+	180	1	Intergenic	novelGene_4591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCTGCAGAGTAGGAGCA	NA	False	NA	NA	False	NA	NA	NA	148880602	148880782	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_148880600_148880800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147993	chr6	-	224	1	ISM	ENSMUSG00000030313.16	ENSMUST00000111557.8	9831	21	111415	1971	26923	-1971	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCACAATGACTGAGCTTC	9406	False	NA	NA	False	NA	NA	NA	148891763	148891539	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr6_-_148891500_148891800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000147999	chr6	-	182	1	Intergenic	novelGene_4592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATGCATAGTGAGAAGC	5385	False	NA	NA	False	NA	NA	NA	148895784	148895602	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_-_148895600_148895800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148012	chr6	+	192	1	Intergenic	novelGene_4593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTCATGATTGGAGAGAT	6999	False	NA	NA	False	NA	NA	NA	148999717	148999909	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_148999700_148999900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148022	chr6	+	198	1	Intergenic	novelGene_4594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTCAGGAAGACTGATAA	NA	False	NA	NA	False	NA	NA	NA	149012568	149012766	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_149012600_149012800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148032	chr6	+	193	1	Intergenic	novelGene_4595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACTAGTCCCTAGAGGAG	NA	False	NA	NA	False	NA	NA	NA	149094733	149094926	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_149094700_149094900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148068	chr6	+	218	1	Intergenic	novelGene_4596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAACTCTTAGGTCTGGA	NA	False	NA	NA	False	NA	NA	NA	149279494	149279712	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_149279500_149279700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148073	chr6	+	185	1	Intergenic	novelGene_4597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTATATTTAC	NA	False	NA	NA	False	NA	NA	NA	149303757	149303942	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_149303800_149303900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148081	chr6	+	171	1	Intergenic	novelGene_4598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATTGAAGCACAGATAGAT	NA	False	NA	NA	False	NA	NA	NA	149322558	149322729	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_149322600_149322700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148087	chr6	+	191	1	Intergenic	novelGene_4599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTCCATAAGGCAGTAG	NA	False	NA	NA	False	NA	NA	NA	149454252	149454443	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr6_+_149454300_149454400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148094	chr7	-	3398	12	FSM	ENSMUSG00000054753.10	ENSMUST00000171749.3	3449	12	53	-2	-45	2	multi-exon	FALSE	canonical	3	117	junction_11	40.7771610034849	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTATTTTTCTGTGTG	9559	False	NA	89	True	NA	NA	NA	3218976	3204495	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214128_3218840
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148102	chr7	-	3354	12	NIC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	141	junction_11	34.6786904344431	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTTTATTTTTCTGTG	9598	False	NA	87	True	NA	NA	NA	3218937	3204497	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214125_3218840
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148113	chr7	+	198	1	Intergenic	novelGene_4600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTGGCTGCTCTTCCA	3124	False	NA	NA	False	NA	NA	NA	3210216	3210414	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_3210200_3210400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148123	chr7	+	906	1	FSM	ENSMUSG00000107470.3	ENSMUST00000203929.3	795	1	-26	-85	-26	85	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGATTAAAATTTTTTTTT	10001	False	NA	NA	False	AATAAA	-30	NA	3230815	3231721	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_3230800_3231700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148131	chr7	-	207	1	Intergenic	novelGene_4601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACTCAGACATTCCTTAG	NA	False	NA	NA	False	NA	NA	NA	3234069	3233862	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_3233900_3234100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148143	chr7	+	180	1	Intergenic	novelGene_4602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAATGAGTATACAC	NA	False	NA	NA	False	NA	NA	NA	3236968	3237148	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_3237000_3237100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148151	chr7	-	172	1	Intergenic	novelGene_4603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTGATACAGGATTTC	7152	False	NA	NA	False	NA	NA	NA	3242608	3242436	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_3242400_3242600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148156	chr7	+	194	1	Intergenic	novelGene_4604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTGAGGTTATTGTGAG	NA	False	NA	NA	False	NA	NA	NA	3248537	3248731	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_3248500_3248700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148158	chr7	-	3160	2	Fusion	ENSMUSG00000106340.3_ENSMUSG00000078817.5	novel	6928	10	NA	NA	-2320	807	multi-exon	FALSE	canonical	3	14	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGGGGGAGGCTCTAGGT	NA	False	NA	NA	False	NA	NA	NA	3269689	3266504	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr7_-_3267569_3267593
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148170	chr7	-	3082	2	Fusion	ENSMUSG00000106340.3_ENSMUSG00000078817.5	novel	6928	10	NA	NA	-2320	802	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGGCGTGGGGGAGGCTC	NA	False	NA	NA	False	NA	NA	NA	3269689	3266509	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr7_-_3268624_3268721
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148175	chr7	+	1754	1	FSM	ENSMUSG00000077903.3	ENSMUST00000104710.3	84	1	-1379	-291	-1379	291	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGCTTTCTCAGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	3267935	3269689	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_3267900_3269700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148185	chr7	+	188	1	Intergenic	novelGene_4605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTTAAAAGAAGTGAAGT	247	False	NA	NA	False	NA	NA	NA	3293407	3293595	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_3293400_3293600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148196	chr7	+	195	1	Intergenic	novelGene_4606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTAAGTAGCAGCGGCA	885	False	NA	NA	False	NA	NA	NA	3304589	3304784	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_3304600_3304800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148202	chr7	+	192	1	Intergenic	novelGene_4607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTTTCTAGGTTGGTGT	435	False	NA	NA	False	NA	NA	NA	3309389	3309581	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_3309400_3309600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148206	chr7	+	183	1	Intergenic	novelGene_4608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTGCCGGGCAGT	NA	False	NA	NA	False	NA	NA	NA	3319288	3319471	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_3319300_3319500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148209	chr7	-	167	1	Intergenic	novelGene_4609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	3321738	3321571	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_3321600_3321700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148221	chr7	+	2796	3	FSM	ENSMUSG00000068566.14	ENSMUST00000096744.8	2813	3	25	-8	-16	8	multi-exon	FALSE	canonical	3	335	junction_1	308.5	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGCTTTCTTTCTCTCC	255	False	NA	22	True	AATATA	-16	NA	3339083	3347873	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_3339156_3341727_3341816_3345237
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148238	chr7	+	2805	3	NNC	ENSMUSG00000068566.14	novel	2798	2	NA	NA	-88	6	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_1	427.5	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCATGCTTTCTTTCTCT	2702	False	NA	20	True	AATATA	-14	NA	3341530	3347871	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_+_3341614_3341727_3341816_3345237
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148254	chr7	+	2969	17	FSM	ENSMUSG00000078816.11	ENSMUST00000172109.4	2119	17	-123	-727	0	-5	multi-exon	TRUE	canonical	3	19	junction_9	8.11802585300146	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGTTTGGATGTTTTC	NA	False	NA	6	True	AATAAA	-17	NA	3352037	3379610	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_3352476_3352821_3352854_3353859_3353943_3359079_3359192_3359351_3359484_3360904_3361062_3362213_3362349_3362648_3362737_3363027_3363058_3368046_3368236_3370855_3370948_3371032_3371096_3371971_3372111_3375931_3376013_3377550_3377659_3378343_3378485_3378661
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148268	chr7	+	243	1	Intergenic	novelGene_4610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTGGGTTATAAGCCAG	NA	False	NA	NA	False	NA	NA	NA	3408185	3408428	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_3408200_3408400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148274	chr7	+	2442	3	FSM	ENSMUSG00000078815.9	ENSMUST00000108647.3	868	3	-1070	-504	-603	0	multi-exon	FALSE	canonical	2	4	junction_2	11.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCTGTGTTGGAGCTC	NA	False	NA	NA	False	ATTAAA	-21	NA	3472107	3484183	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_3473509_3478953_3479029_3483217
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148280	chr7	-	192	1	Intergenic	novelGene_4611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAAGAGAGCAGTGAATC	NA	False	NA	NA	False	NA	NA	NA	3522264	3522072	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_3522100_3522300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148285	chr7	+	185	1	Intergenic	novelGene_4612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGGACACAAATTTATTGA	NA	False	NA	NA	False	NA	NA	NA	3540933	3541118	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_3540900_3541100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148295	chr7	-	184	1	Intergenic	novelGene_4613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAACTAAACTAAAATTGC	NA	False	NA	NA	False	NA	NA	NA	3595853	3595669	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_3595700_3595900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148300	chr7	+	353	4	FSM	ENSMUSG00000035674.14	ENSMUST00000076657.11	515	4	0	162	0	2	multi-exon	FALSE	canonical	3	2080	junction_1	661.918591839074	249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCTTTCGTGGGTTTC	255	False	NA	24	True	AATAAA	-26	NA	3620371	3623164	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_3620407_3620615_3620691_3622428_3622507_3622999
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148309	chr7	-	1128	6	FSM	ENSMUSG00000006335.17	ENSMUST00000108641.10	1166	6	40	-2	-5	2	multi-exon	FALSE	canonical	3	150	junction_1	47.3142684610044	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTAGGTCACCGTTTA	NA	False	NA	1	True	AATAAA	-18	NA	3632888	3623320	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_3623474_3623745_3623983_3624061_3624132_3627597_3627669_3631826_3632086_3632550
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148313	chr7	-	1096	6	FSM	ENSMUSG00000006335.17	ENSMUST00000155592.8	1091	6	-5	0	-5	0	multi-exon	FALSE	canonical	3	96	junction_1	68.2800117164606	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTCTAGGTCACCGTT	NA	False	NA	-1	True	AATAAA	-16	NA	3632888	3623322	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_3623474_3623775_3623983_3624061_3624132_3627597_3627669_3631826_3632086_3632550
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148331	chr7	+	3140	14	FSM	ENSMUSG00000008373.17	ENSMUST00000008517.13	3144	14	4	0	-3	0	multi-exon	FALSE	canonical	3	674	junction_1	77.2880572079687	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAGTTCAATACTTGGC	2937	False	NA	NA	False	AATAAA	-21	NA	3632987	3645485	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148337	chr7	+	3626	13	NIC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	16	0	intron_retention	FALSE	canonical	3	674	junction_1	80.2122185206219	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGGTGTGAGTGATTAT	2956	False	NA	14	True	ATTAAA	-22	NA	3633006	3644228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_3633056_3633556_3633742_3633843_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148342	chr7	+	1952	14	NIC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	241.003081322834	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGGTGTGAGTGATTAT	2999	False	NA	14	True	ATTAAA	-22	NA	3633049	3644228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_3633187_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148357	chr7	+	2929	18	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	163	junction_7	215.895415536845	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCTCCTATCCC	2708	False	NA	NA	False	AATAAA	-23	NA	3648246	3664108	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656195_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148358	chr7	+	2926	18	FSM	ENSMUSG00000035632.17	ENSMUST00000038913.16	2822	18	-104	0	-20	0	multi-exon	FALSE	canonical	3	860	junction_1	78.9623448430591	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCTCCTATCCC	2708	False	NA	NA	False	AATAAA	-23	NA	3648246	3664108	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148393	chr7	+	2928	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	330.904914263504	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCTGAGGCCTC	2754	False	NA	NA	False	AATAAA	-14	NA	3648292	3664099	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654169_3654302_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148398	chr7	+	2883	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_1	239.564555956402	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCTCCTATCCC	2754	False	NA	NA	False	AATAAA	-23	NA	3648292	3664108	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_+_3648584_3653796_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148400	chr7	+	2962	17	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	4	0	intron_retention	FALSE	canonical	3	860	junction_1	75.4623250370673	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCTGAGGCCTC	2754	False	NA	NA	False	AATAAA	-14	NA	3648292	3664099	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148408	chr7	+	2882	18	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	136	junction_1	220.255859396784	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCTGAGGCCTC	2754	False	NA	NA	False	AATAAA	-14	NA	3648292	3664099	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_3648595_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148409	chr7	+	2885	18	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	136	junction_1	291.16989891574	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCTGAGGCCTC	2754	False	NA	NA	False	AATAAA	-14	NA	3648292	3664099	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_3648595_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656195_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148422	chr7	+	96	1	FSM	ENSMUSG00000035632.17	ENSMUST00000206331.2	4333	1	4237	0	-1804	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTTGTGGATAGTCCAG	6965	False	NA	38	True	NA	NA	NA	3652503	3652599	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_3652500_3652600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148443	chr7	-	2863	8	FSM	ENSMUSG00000035596.15	ENSMUST00000038608.14	2878	8	15	0	15	0	multi-exon	FALSE	canonical	3	178	junction_4	25.6960252623964	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTGTGAGTATAACTG	7408	False	NA	-2	True	AATAAA	-15	NA	3696507	3680787	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_3681849_3686807_3686985_3688672_3689034_3691521_3691682_3694260_3694388_3694804_3694935_3695038_3695118_3695739
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148454	chr7	-	183	1	Intergenic	novelGene_4614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAGAAATAGAAATGCA	1573	False	NA	NA	False	NA	NA	NA	3691993	3691810	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_3691800_3692000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148464	chr7	+	1378	5	NIC	ENSMUSG00000035585.17	novel	1779	5	NA	NA	-25	-2	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	477.15458710988	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTATTTTGAGTCCTT	2148	False	NA	4	True	AATAAA	-14	NA	3696736	3704009	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_3696865_3697596_3697844_3697976_3698227_3698350_3698621_3703526
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148485	chr7	+	1351	4	FSM	ENSMUSG00000035585.17	ENSMUST00000108627.4	1319	4	-22	-10	-7	2	multi-exon	FALSE	canonical	3	1035	junction_3	83.107694522763	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTTGAGTCCTTACAA	2911	False	NA	8	True	AATAAA	-18	NA	3697499	3704013	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_3697844_3697976_3698227_3698350_3698621_3703526
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148498	chr7	+	757	5	FSM	ENSMUSG00000006333.15	ENSMUST00000006496.15	751	5	-2	-4	-2	4	multi-exon	FALSE	canonical	3	8457	junction_1	2746.02161089457	1523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTGCCTCTGTAGTGA	1262	False	NA	7	True	AATAAA	-22	NA	3706989	3709900	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_3707064_3707325_3707448_3707644_3707768_3708731_3708919_3709649
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148510	chr7	+	884	6	NIC	ENSMUSG00000006333.15	novel	1347	5	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	206	junction_4	6461.44068764854	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTGCCTCTGTAGTGA	1309	False	NA	7	True	AATAAA	-22	NA	3707036	3709900	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_3707064_3707325_3707448_3707644_3707768_3708731_3708919_3709006_3709181_3709649
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148570	chr7	+	3657	16	NIC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	173	junction_15	69.6971225294767	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGCCTGTTTTA	73	False	NA	20	True	ATTAAA	-20	NA	4140028	4151176	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148585	chr7	+	5493	14	NIC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	-1	0	intron_retention	FALSE	canonical	3	249	junction_1	49.7978160686501	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTCTGCTTGGCCTGT	81	False	NA	16	True	ATTAAA	-16	NA	4140036	4151172	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148598	chr7	+	5155	16	NNC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	-3	0	intron_retention	FALSE	canonical	3	40	junction_8	108.760082546657	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTCTGCTTGGCCTGT	89	False	NA	16	True	ATTAAA	-16	NA	4140044	4151172	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146309_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148602	chr7	+	3653	17	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_8	117.390224651587	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACCTGTTTCTGCTTGGCC	92	False	NA	13	True	ATTAAA	-13	NA	4140047	4151169	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146309_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148630	chr7	+	177	1	Intergenic	novelGene_4615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGCAGCTAAAAAAA	NA	False	NA	4	True	NA	NA	NA	4164812	4164989	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_4164800_4165000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148642	chr7	-	177	1	Intergenic	novelGene_4616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAATAAAGGGAGAA	NA	False	NA	NA	False	NA	NA	NA	4212577	4212400	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_4212400_4212600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148645	chr7	+	199	1	Intergenic	novelGene_4617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCACATAGGCTAACAGAC	NA	False	NA	NA	False	NA	NA	NA	4223582	4223781	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_4223600_4223800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148666	chr7	-	3007	22	FSM	ENSMUSG00000019254.17	ENSMUST00000013886.9	2983	22	-20	-4	-20	4	multi-exon	FALSE	canonical	3	198	junction_16	25.6093980765123	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTCCTGATTGTGGG	9921	False	NA	1	True	AATAAA	-21	NA	4504699	4484514	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148692	chr7	+	194	1	Intergenic	novelGene_4618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAATTGTACAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	4628612	4628806	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_4628600_4628800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148694	chr7	-	3480	24	Fusion	ENSMUSG00000045282.8_ENSMUSG00000052296.8	novel	2731	7	NA	NA	2	657	multi-exon	FALSE	canonical	2	11	junction_1	66.4640841368572	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGGTGTGGGAGAGATT	NA	False	NA	NA	False	NA	NA	NA	4661987	4633836	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr7_-_4634236_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148716	chr7	-	1427	8	NIC	ENSMUSG00000063802.6	novel	1593	8	NA	NA	-2	6	combination_of_known_junctions	FALSE	canonical	3	78	junction_7	161.654708864169	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTTGCATTGTTTTT	NA	False	NA	-1	True	AATAAA	-22	NA	4687982	4663513	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687482_4687892
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148719	chr7	-	1518	8	FSM	ENSMUSG00000063802.6	ENSMUST00000079970.6	1593	8	81	-6	-6	6	multi-exon	FALSE	canonical	3	115	junction_7	148.934720667842	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTTGCATTGTTTTT	NA	False	NA	-1	True	AATAAA	-22	NA	4687986	4663513	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687569_4687892
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148723	chr7	-	1511	8	NIC	ENSMUSG00000063802.6	novel	1593	8	NA	NA	-2	6	combination_of_known_junctions	FALSE	canonical	3	210	junction_7	116.504882966775	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTTGCATTGTTTTT	NA	False	NA	-1	True	AATAAA	-22	NA	4687982	4663513	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687566_4687892
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148773	chr7	+	2540	8	NIC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	456	junction_1	90.2970155675599	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	621	False	NA	16	True	ATTAAA	-17	NA	4743151	4750513	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_4743239_4744778_4744981_4745120_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148781	chr7	+	2785	9	FSM	ENSMUSG00000059851.16	ENSMUST00000108582.10	2774	9	-11	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	203.174647778703	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	624	False	NA	16	True	ATTAAA	-17	NA	4743154	4750513	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_4743818_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148793	chr7	+	3737	8	NIC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	-2	0	intron_retention	FALSE	canonical	3	570	junction_2	59.1256013474187	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	633	False	NA	16	True	ATTAAA	-17	NA	4743163	4750513	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148799	chr7	+	2158	9	NNC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_6	216.601448517779	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	636	False	NA	16	True	ATTAAA	-17	NA	4743166	4750513	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_+_4743239_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748836_4748938_4749075_4749261_4749375
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148805	chr7	-	438	4	FSM	ENSMUSG00000051811.15	ENSMUST00000184143.8	435	4	-3	0	-3	0	multi-exon	FALSE	canonical	0	0	junction_1	378.537830195198	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTTTTCTCGTT	NA	False	NA	-9	True	AATAAA	-17	NA	4756025	4754790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_4754975_4755106_4755161_4755722_4755849_4755951
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148806	chr7	-	1001	3	NIC	ENSMUSG00000051811.15	novel	435	4	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_1	401.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTTTTCTCGTT	NA	False	NA	-9	True	AATAAA	-17	NA	4756026	4754790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_4754975_4755106_4755849_4755951
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148807	chr7	-	1150	2	FSM	ENSMUSG00000051811.15	ENSMUST00000182272.2	519	2	-498	-133	-3	0	multi-exon	FALSE	canonical	3	648	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTTTTCTCGTT	NA	False	NA	-9	True	AATAAA	-17	NA	4756025	4754790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_4754975_4755059
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148809	chr7	-	486	4	FSM	ENSMUSG00000051811.15	ENSMUST00000063324.14	553	4	67	0	-4	0	multi-exon	FALSE	canonical	3	648	junction_1	73.0677007226099	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTTTTCTCGTT	NA	False	NA	-9	True	AATAAA	-17	NA	4756026	4754790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_4754975_4755059_4755161_4755722_4755849_4755951
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148826	chr7	-	1132	2	NIC	ENSMUSG00000051811.15	novel	553	4	NA	NA	-3	0	intron_retention	FALSE	canonical	3	803	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTTTTCTCGTT	NA	False	NA	-9	True	AATAAA	-17	NA	4756025	4754790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_4755849_4755951
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148835	chr7	-	1235	1	NIC	ENSMUSG00000051811.15	novel	553	4	NA	NA	-3	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTTTTCTCGTT	NA	False	NA	-9	True	AATAAA	-17	NA	4756025	4754790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_4754800_4756000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148845	chr7	-	692	2	FSM	ENSMUSG00000030431.9	ENSMUST00000168578.3	1375	2	71	612	71	3	multi-exon	FALSE	canonical	3	322	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTGCCTGTCTGGTTAA	233	False	NA	-3	True	GATAAA	-19	NA	4792584	4788167	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_4788279_4792003
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148853	chr7	+	546	5	FSM	ENSMUSG00000030432.13	ENSMUST00000032597.12	1106	5	56	504	56	0	multi-exon	FALSE	canonical	3	3938	junction_1	1160.31525888441	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCTCATTGAGCT	2749	False	NA	17	True	AATAAA	-32	NA	4795928	4797561	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_4795998_4796319_4796409_4796501_4796626_4797062_4797182_4797416
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148860	chr7	+	836	4	FSM	ENSMUSG00000030432.13	ENSMUST00000078432.5	772	4	-28	-36	-28	0	multi-exon	FALSE	canonical	3	6459	junction_1	109.515092820832	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCTCATTGAGCT	2781	False	NA	17	True	AATAAA	-32	NA	4795960	4797561	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_4796409_4796501_4796626_4797062_4797182_4797416
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148877	chr7	-	1006	4	FSM	ENSMUSG00000060860.9	ENSMUST00000079496.9	1238	4	235	-3	-4	3	multi-exon	FALSE	canonical	3	9878	junction_1	292.246851518066	513	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGCCTGAAGTGTCTAG	NA	False	NA	-22	True	AATAAA	-18	NA	4815354	4811009	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_4811484_4813420_4813612_4814407_4814556_4815161
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148885	chr7	+	205	1	Intergenic	novelGene_4619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGCTCTCGCAGAGGCC	6092	False	NA	NA	False	NA	NA	NA	4819075	4819280	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_4819100_4819300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148889	chr7	+	191	1	Intergenic	novelGene_4620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGTTAAAACTTGTCT	NA	False	NA	NA	False	NA	NA	NA	4864135	4864326	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_4864100_4864300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148894	chr7	+	197	1	Intergenic	novelGene_4621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTGTGTTCTACACAA	NA	False	NA	NA	False	NA	NA	NA	4906987	4907184	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_4907000_4907200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148904	chr7	+	3533	3	FSM	ENSMUSG00000074406.6	ENSMUST00000116354.4	3523	3	-10	0	-10	0	multi-exon	FALSE	canonical	3	14	junction_2	2	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGTTTTGTTTTCATG	2961	False	NA	8	True	AATAAA	-14	NA	4918205	4925001	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_4918405_4920408_4920516_4921774
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148911	chr7	+	196	1	Intergenic	novelGene_4622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGCAAAAACCAAGTCA	NA	False	NA	NA	False	NA	NA	NA	4976795	4976991	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_4976800_4977000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148913	chr7	+	205	1	Intergenic	novelGene_4623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCAGTATAGGTATTGT	NA	False	NA	NA	False	NA	NA	NA	5000219	5000424	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_5000200_5000400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148957	chr7	+	2145	12	FSM	ENSMUSG00000030435.17	ENSMUST00000005041.15	2183	12	45	-7	45	7	multi-exon	FALSE	canonical	3	1559	junction_7	130.155406157663	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTGTGTCCAGTGTGTC	117	False	NA	40	True	ATTAAA	-30	NA	5065186	5082944	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148958	chr7	+	2154	12	FSM	ENSMUSG00000030435.17	ENSMUST00000209099.2	2088	12	-57	-9	45	4	multi-exon	FALSE	canonical	0	0	junction_10	525.567461915969	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCATCTGTGTCCAGTGT	117	False	NA	37	True	ATTAAA	-27	NA	5065186	5082941	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078239_5078466_5078716_5082180
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148963	chr7	+	2087	11	NIC	ENSMUSG00000030435.17	novel	2183	12	NA	NA	46	0	intron_retention	FALSE	canonical	3	28	junction_2	528.922527408315	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATGGATCCTCATCTGT	118	False	NA	28	True	ATTAAA	-18	NA	5065187	5082932	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_5065336_5069401_5069538_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148977	chr7	+	2069	12	NNC	ENSMUSG00000030435.17	novel	1810	12	NA	NA	459	0	intron_retention	FALSE	canonical	2	7	junction_1	513.507739325424	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATGGATCCTCATCTGT	553	False	NA	28	True	ATTAAA	-18	NA	5065761	5082932	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_+_5065847_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148981	chr7	+	2925	4	ISM	ENSMUSG00000030435.17	ENSMUST00000207960.2	904	5	2766	-721	-2179	721	3prime_fragment	FALSE	canonical	3	1693	junction_1	134.120178281354	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGTTCTCCCTTCCCCCA	220	False	NA	NA	False	NA	NA	NA	5068047	5072316	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr7_+_5069538_5070208_5070254_5070542_5070647_5071030
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000148997	chr7	+	2577	12	NIC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	31.3495356971958	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCCCTTAAATTC	1299	False	NA	21	True	AATAAA	-15	NA	5083224	5101177	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_5083477_5085016_5085121_5086661_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098886_5098974_5100152_5100411_5100570
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149002	chr7	+	2498	12	NIC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	43.1135345280822	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCCCTTAAATTC	1311	False	NA	21	True	AATAAA	-15	NA	5083236	5101177	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_5083477_5085016_5085121_5086728_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098886_5098974_5100152_5100411_5100570
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149012	chr7	-	1893	3	FSM	ENSMUSG00000046792.9	ENSMUST00000094870.3	1897	3	6	-2	6	2	multi-exon	FALSE	canonical	3	46	junction_1	59	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGCCTGTTTCTTGAGT	9632	False	NA	1	True	AATAAA	-22	NA	6158964	6134487	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_6136171_6146060_6146150_6158843
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149022	chr7	+	1656	5	FSM	ENSMUSG00000044876.16	ENSMUST00000108566.8	1648	5	-7	-1	4	1	multi-exon	FALSE	canonical	3	144	junction_2	66.2740522376593	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGACTCTCCGGTGTTGT	2960	False	NA	16	True	AATAAA	-25	NA	6175504	6193421	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_6175574_6176980_6177101_6186860_6187202_6191132_6191242_6192404
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149026	chr7	+	1527	4	FSM	ENSMUSG00000044876.16	ENSMUST00000054680.12	2467	4	11	929	0	-1	multi-exon	FALSE	canonical	3	89	junction_1	90.9004339312464	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTGACTCTCCGGTGTT	2967	False	NA	14	True	AATAAA	-23	NA	6175511	6193419	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_6175574_6186860_6187202_6191132_6191242_6192404
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149044	chr7	+	198	1	Intergenic	novelGene_4624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	285	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGGAAGATAAAGAAACC	4906	False	NA	NA	False	NA	NA	NA	6177450	6177648	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_6177400_6177600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149065	chr7	+	3441	5	FSM	ENSMUSG00000054893.16	ENSMUST00000086327.12	3672	5	24	207	10	-6	multi-exon	FALSE	canonical	3	26	junction_1	11.1214882097676	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAAGAGGTTCTTTTACA	2996	False	NA	NA	False	AATAAA	-31	NA	6289601	6310675	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_6289654_6292356_6292437_6293534_6293662_6296847_6296941_6307586
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149089	chr7	+	181	1	Intergenic	novelGene_4625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGCAAACAAACTTTTACA	4286	False	NA	NA	False	NA	NA	NA	6956503	6956684	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_6956500_6956700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149098	chr7	+	1215	7	FSM	ENSMUSG00000070837.7	ENSMUST00000208049.2	1401	7	186	0	-17	0	multi-exon	FALSE	canonical	2	56	junction_6	128.262751152988	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTGCTTGAGTGAGTT	2897	False	NA	20	True	ATTAAA	-21	NA	6998484	7006090	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_6998712_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149105	chr7	+	1331	7	FSM	ENSMUSG00000070837.7	ENSMUST00000207711.2	1320	7	-11	0	-11	0	multi-exon	FALSE	canonical	2	56	junction_6	160.229696234985	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTGCTTGAGTGAGTT	2903	False	NA	20	True	ATTAAA	-21	NA	6998490	7006090	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_6998834_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149111	chr7	-	2004	5	FSM	ENSMUSG00000062116.11	ENSMUST00000056246.8	2042	5	38	0	-5	0	multi-exon	FALSE	canonical	3	51	junction_3	2.54950975679639	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTAATGACTCTTGAGGT	6274	False	NA	-5	True	AATAAA	-21	NA	7124449	7117688	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_7119200_7119611_7119711_7120784_7120912_7122370_7122410_7124221
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149118	chr7	-	3650	1	NIC	ENSMUSG00000063535.8	novel	4073	4	NA	NA	6002	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGGTTGCGTCTTTCTT	3024	False	NA	NA	False	NA	NA	NA	7133721	7130071	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_7130100_7133700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149123	chr7	-	3026	4	FSM	ENSMUSG00000063535.8	ENSMUST00000032622.9	3028	4	4	-2	4	2	multi-exon	TRUE	canonical	3	13	junction_1	4.32049379893857	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGGTTGCGTCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	7139750	7133671	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_7136168_7137165_7137250_7138290_7138418_7139431
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149132	chr7	+	205	1	Intergenic	novelGene_4626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATATGCTACTGTTTCCA	NA	False	NA	NA	False	TTTAAA	-4	NA	7140715	7140920	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_7140700_7140900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149161	chr7	-	2531	5	FSM	ENSMUSG00000092490.8	ENSMUST00000174729.2	825	5	-183	-1523	16	1093	multi-exon	FALSE	canonical	3	19	junction_4	6.67083203206317	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGTCTCACTTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	8865834	8857752	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_8859771_8860940_8861028_8861801_8861928_8863073_8863113_8865573
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149164	chr7	+	202	1	Intergenic	novelGene_4627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATGCTGCAGAAGCACCA	NA	False	NA	NA	False	NA	NA	NA	9872458	9872660	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_9872500_9872700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149167	chr7	-	4206	4	FSM	ENSMUSG00000030393.9	ENSMUST00000032551.8	4199	4	0	-7	0	7	multi-exon	TRUE	canonical	3	55	junction_1	5.43650214343336	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTAAGACTTCATTTAT	NA	False	NA	1	True	NA	NA	NA	10229321	10221148	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_10224936_10226205_10226333_10228416_10228456_10229068
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149188	chr7	+	1832	4	FSM	ENSMUSG00000070828.11	ENSMUST00000145237.8	1829	4	0	-3	0	3	multi-exon	FALSE	canonical	3	19	junction_1	4.49691252107735	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTTTTGTTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	11131841	11136248	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_11131924_11132578_11133051_11134886_11135047_11135130
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149210	chr7	+	192	1	Intergenic	novelGene_4628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCCCCAGGAGATCCTAA	NA	False	NA	NA	False	NA	NA	NA	12456038	12456230	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_12456000_12456200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149229	chr7	+	197	1	Intergenic	novelGene_4629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAAACTTGACAGGCATG	NA	False	NA	NA	False	NA	NA	NA	12549582	12549779	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_12549600_12549800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149238	chr7	+	3364	8	FSM	ENSMUSG00000058638.15	ENSMUST00000004614.15	3591	8	236	-9	-40	9	multi-exon	FALSE	canonical	3	285	junction_1	17.0617127163813	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAGCGTGTAAGTCATTC	NA	False	NA	36	True	NA	NA	NA	12568923	12584513	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_12569092_12569373_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149245	chr7	+	184	1	Intergenic	novelGene_4630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGTATCTAATTTAATAT	6419	False	NA	NA	False	NA	NA	NA	12610146	12610330	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_12610100_12610300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149270	chr7	+	767	6	FSM	ENSMUSG00000012848.16	ENSMUST00000108539.8	794	6	28	-1	0	0	multi-exon	FALSE	canonical	3	946	junction_1	6466.78878578851	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	False	NA	38	True	AATAAA	-24	NA	12656244	12660613	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_12656350_12656899_12657009_12659318_12659529_12659663_12659793_12660322_12660422_12660498
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149278	chr7	+	117	1	NIC	ENSMUSG00000012848.16	novel	761	6	NA	NA	4133	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	False	NA	38	True	AATAAA	-24	NA	12660496	12660613	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_12660500_12660600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149285	chr7	-	176	1	Intergenic	novelGene_4631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAGCTAGAAATG	NA	False	NA	NA	False	NA	NA	NA	12666333	12666157	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_12666200_12666300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149292	chr7	+	326	1	Intergenic	novelGene_4632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCATGATCAATCTCTGT	NA	False	NA	NA	False	NA	NA	NA	12668481	12668807	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_12668500_12668800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149294	chr7	+	197	1	Intergenic	novelGene_4633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTGTCTCAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	12687803	12688000	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_12687800_12688000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149297	chr7	-	232	1	Intergenic	novelGene_4634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATTAGTACAGAATATGT	NA	False	NA	NA	False	NA	NA	NA	12690065	12689833	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_12689800_12690100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149301	chr7	+	186	1	Intergenic	novelGene_4635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCTAATGGAAAGGCAAAAA	NA	False	NA	NA	False	NA	NA	NA	12693877	12694063	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_12693900_12694100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149308	chr7	-	183	1	Intergenic	novelGene_4636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTGGAGCAAGCAAGGCC	NA	False	NA	NA	False	NA	NA	NA	12694576	12694393	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_12694400_12694600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149318	chr7	+	207	1	Antisense	novelGene_ENSMUSG00000049600.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAAGTCTAGGATATCAAA	NA	False	NA	NA	False	NA	NA	NA	12739257	12739464	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr7_+_12739300_12739500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149325	chr7	-	2280	3	NIC	ENSMUSG00000049600.9	novel	2171	3	NA	NA	10	45	combination_of_known_junctions	FALSE	canonical	3	86	junction_2	55	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTCGTAGGCTTTCTG	NA	False	NA	0	True	AATAAA	-17	NA	12743951	12739592	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_12740308_12740950_12742257_12743692
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149330	chr7	-	2216	3	FSM	ENSMUSG00000049600.9	ENSMUST00000051390.9	2171	3	0	-45	0	45	multi-exon	FALSE	canonical	3	66	junction_2	65	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTCGTAGGCTTTCTG	NA	False	NA	0	True	AATAAA	-17	NA	12743757	12739592	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_12740308_12740950_12742257_12743562
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149345	chr7	-	2213	3	NNC	ENSMUSG00000049600.9	novel	3908	3	NA	NA	189	43	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	92	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGCCTCGTAGGCTTTC	NA	False	NA	-2	True	AATAAA	-15	NA	12743538	12739594	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_-_12740308_12740950_12742257_12743344
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149353	chr7	+	3302	17	FSM	ENSMUSG00000005566.15	ENSMUST00000005705.8	3245	17	-43	-14	-43	14	multi-exon	FALSE	canonical	3	3307	junction_7	380.550172242439	1302	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGGGACTGTTCCTGA	NA	False	NA	72	True	AATAAA	-33	NA	12758035	12764976	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149398	chr7	-	944	6	FSM	ENSMUSG00000033916.6	ENSMUST00000005711.6	949	6	9	-4	9	0	multi-exon	FALSE	canonical	3	2610	junction_5	213.695671458268	213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGCTGTGAGCTTATGA	6944	False	NA	-7	True	AATAAA	-21	NA	12768725	12765936	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_12766130_12766215_12766278_12766361_12766493_12766568_12766749_12767755_12767970_12768561
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149418	chr7	-	1501	6	FSM	ENSMUSG00000005575.17	ENSMUST00000005714.14	1472	6	-26	-3	-24	3	multi-exon	FALSE	canonical	3	1870	junction_5	193.215320303541	377	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGCCTCTTCCTTCTGT	8417	False	NA	0	True	ATTAAA	-20	NA	12772226	12769161	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_12769682_12769768_12769833_12770138_12770243_12770360_12770400_12770492_12770588_12771547
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149427	chr7	+	3334	28	FSM	ENSMUSG00000056394.21	ENSMUST00000177588.10	3174	28	-159	-1	-159	1	multi-exon	TRUE	canonical	3	470	junction_1	193.081793225492	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGAGGAGGTCTACAT	948	False	NA	31	True	AATAAA	-19	NA	13011079	13045351	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_13011456_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149471	chr7	-	184	1	Intergenic	novelGene_4637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCAACCCAATTCTTGAAA	NA	False	NA	NA	False	NA	NA	NA	15366435	15366251	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_15366300_15366400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149479	chr7	-	1385	3	FSM	ENSMUSG00000041583.9	ENSMUST00000108513.5	1344	3	-44	3	-44	-3	multi-exon	FALSE	canonical	3	46	junction_1	9.5	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTGCCAGTTTTTACC	NA	False	NA	17	True	AATAAA	-33	NA	15573647	15567168	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_15567876_15568304_15568891_15573555
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149483	chr7	+	250	1	Intergenic	novelGene_4638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCAGTGATGTCACCTAA	NA	False	NA	NA	False	AAGAAA	-44	NA	15572575	15572825	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_15572600_15572800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149489	chr7	+	181	1	Intergenic	novelGene_4639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATGAAGGTGTAT	NA	False	NA	NA	False	NA	NA	NA	15625593	15625774	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_15625600_15625800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149492	chr7	+	2141	3	FSM	ENSMUSG00000074365.14	ENSMUST00000150050.3	2090	3	-49	-2	-2	2	multi-exon	FALSE	canonical	3	257	junction_2	3	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTGTGCCTGCTTGTGA	NA	False	NA	NA	False	AATAAA	-21	NA	15630046	15634225	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_15630183_15631328_15631478_15632369
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149508	chr7	+	638	3	FSM	ENSMUSG00000074365.14	ENSMUST00000171280.3	571	3	-48	-19	-48	19	multi-exon	FALSE	canonical	3	864	junction_1	106.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGTCTTATTCCATAGCC	NA	False	NA	8	True	AATAAA	-43	NA	15635522	15637964	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_15635663_15636774_15636933_15637624
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149517	chr7	+	200	1	Intergenic	novelGene_4640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACAAAGGTTAAATTTAG	NA	False	NA	NA	False	NA	NA	NA	15647804	15648004	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_15647800_15648000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149541	chr7	-	1587	12	NIC	ENSMUSG00000041560.13	novel	3176	13	NA	NA	-8	3	intron_retention	FALSE	canonical	3	1334	junction_1	204.584198350889	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGGGTCTTGTTATTTT	NA	False	NA	-6	True	AATAAA	-15	NA	15679988	15671759	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214_15679280_15679754
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149546	chr7	-	1810	12	NIC	ENSMUSG00000041560.13	novel	3176	13	NA	NA	-2	3	intron_retention	FALSE	canonical	3	1683	junction_10	114.507858187885	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGGGTCTTGTTATTTT	NA	False	NA	-6	True	AATAAA	-15	NA	15680001	15671759	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214_15679280_15679754
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149565	chr7	+	1522	11	NNC	ENSMUSG00000006024.14	novel	2517	11	NA	NA	-5	389	at_least_one_novel_splicesite	TRUE	canonical	3	20	junction_9	371.848033476042	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGAGCTGTCCCTTT	NA	False	NA	30	True	AATAAA	-20	NA	15832527	15851053	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849527_15849576_15850388
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149581	chr7	-	4080	16	ISM	ENSMUSG00000006019.16	ENSMUST00000094816.3	4073	17	2807	-81	2807	4	3prime_fragment	FALSE	canonical	3	60	junction_12	12.4347184215093	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGTTTTATTTATTTA	6714	False	NA	0	True	NA	NA	NA	15953111	15931067	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr7_-_15931356_15932490_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15937673_15937791_15938029_15939321_15939424_15939912_15940107_15944438_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149597	chr7	+	203	1	Intergenic	novelGene_4641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCACTCTGTAGACCAGG	NA	False	NA	NA	False	AAGAAA	-3	NA	15983342	15983545	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_15983300_15983500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149626	chr7	-	1948	12	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	-2	-4	combination_of_known_junctions	FALSE	canonical	3	100	junction_1	37.3980155923805	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCCCACTGTGTCCTTG	NA	False	NA	-5	True	AATAAA	-23	NA	16020707	16009392	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_16010036_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149635	chr7	-	166	1	Intergenic	novelGene_4642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTTATTTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	16024167	16024001	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_16024000_16024200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149641	chr7	+	191	1	Intergenic	novelGene_4643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAAGACTTGGCAG	NA	False	NA	NA	False	NA	NA	NA	16024463	16024654	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_16024500_16024700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149645	chr7	+	1869	4	FSM	ENSMUSG00000002083.14	ENSMUST00000002152.13	1814	4	-55	0	-55	0	multi-exon	FALSE	canonical	3	119	junction_1	49.2769948578667	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTTTTTGTTAGCTTTA	NA	False	NA	26	True	AATAAA	-19	NA	16043485	16052130	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_16043787_16046050_16046340_16047551_16047743_16051042
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149683	chr7	+	157	1	Intergenic	novelGene_4644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTTCAAAGCCAGTCTG	3120	False	NA	NA	False	NA	NA	NA	16123007	16123164	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_16123000_16123200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149687	chr7	-	184	1	FSM	ENSMUSG00000109781.2	ENSMUST00000209624.2	1229	1	1030	15	1030	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTTTAAAAAAAAAAGGCAG	NA	False	NA	NA	False	NA	NA	NA	16140878	16140694	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_16140700_16140900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149691	chr7	+	3984	2	ISM	ENSMUSG00000059273.10	ENSMUST00000209289.2	5853	14	28395	1	14757	0	3prime_fragment	FALSE	canonical	3	40	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGAGTCTAGTCTCAT	3324	False	NA	17	True	ATTAAA	-21	NA	16163526	16171620	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr7_+_16163836_16167945
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149697	chr7	+	671	3	FSM	ENSMUSG00000019158.10	ENSMUST00000019302.10	815	3	150	-6	-34	2	multi-exon	FALSE	canonical	3	728	junction_1	16.5	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTGAGTGATAGCTCCT	NA	False	NA	22	True	ATTAAA	-23	NA	16186853	16189421	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_16187096_16188045_16188139_16189085
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149708	chr7	-	7518	7	FSM	ENSMUSG00000058230.13	ENSMUST00000075845.11	9147	7	311	1318	255	1215	multi-exon	TRUE	canonical	3	71	junction_6	12.7366487830285	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCTGCTGTCAGCTTAT	NA	False	NA	0	True	AATAAA	-21	NA	16348607	16228961	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_16231936_16232508_16232615_16245117_16245250_16246332_16246411_16282987_16283133_16295382_16299255_16348396
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149719	chr7	+	202	1	Intergenic	novelGene_4645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTGTCCTTGAATAGT	NA	False	NA	NA	False	NA	NA	NA	16295089	16295291	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_16295100_16295300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149724	chr7	+	172	1	Intergenic	novelGene_4646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATATGTACTGGCTAGT	NA	False	NA	NA	False	NA	NA	NA	16389222	16389394	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_16389200_16389400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149727	chr7	-	185	1	Intergenic	novelGene_4647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCAGAAAGTTGTTTGA	NA	False	NA	NA	False	NA	NA	NA	16419621	16419436	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_16419400_16419600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149729	chr7	+	222	1	Intergenic	novelGene_4648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTACCAAGTGTAGAAGTT	NA	False	NA	NA	False	NA	NA	NA	16466979	16467201	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_16467000_16467200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149749	chr7	-	211	1	Intergenic	novelGene_4649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTACACTTATATTTAATT	8848	False	NA	NA	False	NA	NA	NA	16491480	16491269	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_16491300_16491500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149755	chr7	+	2761	9	FSM	ENSMUSG00000001918.18	ENSMUST00000108496.9	2764	9	4	-1	4	1	multi-exon	FALSE	canonical	3	1461	junction_5	112.684293492927	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGTTGTCACATGTCTT	NA	False	NA	74	True	NA	NA	NA	16515268	16532200	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_16516401_16519600_16519644_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149767	chr7	+	2788	10	NNC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	1	-30	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	649.005468979601	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCATGGCCCTAGAGTCT	NA	False	NA	43	True	AATAAA	-17	NA	16515293	16532169	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_+_16516401_16516480_16516564_16519600_16519644_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149768	chr7	+	3181	8	NIC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	1	-31	intron_retention	FALSE	canonical	3	1461	junction_4	113.413816960505	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACCATGGCCCTAGAGTC	NA	False	NA	42	True	AATAAA	-16	NA	16515293	16532168	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_16516401_16519600_16519644_16520273_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149777	chr7	+	4122	1	NIC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	1	-1678	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGTGGAGTTGTATGTG	NA	False	NA	NA	False	NA	NA	NA	16515293	16519415	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_16515300_16519400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149795	chr7	-	2801	3	FSM	ENSMUSG00000048920.9	ENSMUST00000061390.9	2827	3	3	23	3	-23	multi-exon	FALSE	canonical	3	12	junction_2	10.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGTTTGTTTCCTTGCT	NA	False	NA	NA	False	TTTAAA	-23	NA	16550654	16543193	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_16545902_16548988_16549052_16550624
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149803	chr7	+	3100	18	FSM	ENSMUSG00000030374.16	ENSMUST00000108495.9	3082	18	-12	-6	-12	2	multi-exon	FALSE	canonical	3	350	junction_8	55.9168933502007	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTCCAGGCCATCTGTC	NA	False	NA	18	True	AATAAA	-18	NA	16550229	16574858	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565410_16565506_16566850_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149823	chr7	+	3144	17	NIC	ENSMUSG00000030374.16	novel	3082	18	NA	NA	16	2	intron_retention	FALSE	canonical	3	350	junction_8	56.0801602618965	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGGTTTTCCAGGCCATC	NA	False	NA	14	True	AATAAA	-14	NA	16550257	16574854	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565410_16565506_16566850_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149829	chr7	-	188	1	Intergenic	novelGene_4650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGCTGGTAATTATTTTT	NA	False	NA	NA	False	NA	NA	NA	16594007	16593819	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_16593800_16594000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149846	chr7	-	179	1	Intergenic	novelGene_4651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCCCCCCCCCCAAGT	2042	False	NA	NA	False	NA	NA	NA	16617830	16617651	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_16617700_16617800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149868	chr7	-	1944	13	NNC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	-21	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	317.791718565618	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAAACCCACCTCGACGT	NA	False	NA	-10	True	AATAAA	-30	NA	16761755	16738571	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742638_16742917_16742984_16743799_16743922_16749322_16749471_16756374_16756582_16761617
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149871	chr7	-	2259	12	NIC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	-21	-7	intron_retention	FALSE	canonical	3	1050	junction_5	58.5383959607102	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAAACCCACCTCGACGT	NA	False	NA	-10	True	AATAAA	-30	NA	16761755	16738571	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149875	chr7	-	1970	13	NIC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	-21	-12	combination_of_known_junctions	FALSE	canonical	2	21	junction_8	312.334878598098	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATCTCAAACCCACCTC	NA	False	NA	-15	True	AATAAA	-25	NA	16761755	16738576	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742634_16742917_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149901	chr7	-	2015	14	FSM	ENSMUSG00000074358.10	ENSMUST00000098780.10	2022	14	7	0	7	0	multi-exon	FALSE	canonical	3	126	junction_7	27.4902887640592	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCTAGTGTGTGATTCAA	2767	False	NA	-1	True	AATAAA	-18	NA	18644333	18624807	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627691_18627775_18627859_18628071_18633482_18633639_18634843_18635002_18637394_18637478_18637706_18637865_18644057
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149907	chr7	-	1999	14	NIC	ENSMUSG00000074358.10	novel	2022	14	NA	NA	-6	0	combination_of_known_junctions	TRUE	canonical	3	82	junction_7	38.5657050949086	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCTAGTGTGTGATTCAA	2771	False	NA	-1	True	AATAAA	-18	NA	18644329	18624807	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627703_18627775_18627859_18628071_18633482_18633639_18634843_18635002_18637394_18637478_18637706_18637865_18644057
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149918	chr7	+	190	1	Intergenic	novelGene_4652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACACACAACTAAGGTAAC	2356	False	NA	NA	False	NA	NA	NA	18649439	18649629	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_18649400_18649600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149923	chr7	+	186	1	Intergenic	novelGene_4653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATAAAATAAAAGTCCCC	5062	False	NA	NA	False	NA	NA	NA	18732094	18732280	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_18732100_18732300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149928	chr7	+	226	1	Intergenic	novelGene_4654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAAAGAGGGGGCGGGG	NA	False	NA	NA	False	NA	NA	NA	18737475	18737701	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_18737500_18737700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149935	chr7	+	2725	1	FSM	ENSMUSG00000044030.5	ENSMUST00000053713.5	2734	1	9	0	9	0	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGGTACTGAGATTCTGA	NA	False	NA	21	True	ATTAAA	-27	NA	18737977	18740702	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_18738000_18740700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149940	chr7	-	2044	2	FSM	ENSMUSG00000040891.7	ENSMUST00000036018.6	2037	2	-7	0	-7	0	multi-exon	FALSE	canonical	3	25	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTAGTGTCTTTTTCTT	NA	False	NA	-3	True	ATTAAA	-16	NA	18757470	18747208	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_18749056_18757273
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149958	chr7	+	210	1	Intergenic	novelGene_4655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	416	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCCTCAGCTGATGGCA	NA	False	NA	NA	False	NA	NA	NA	18805912	18806122	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_18805900_18806100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149985	chr7	+	3818	4	FSM	ENSMUSG00000030410.17	ENSMUST00000146429.2	2080	4	-1737	-1	-2	0	multi-exon	FALSE	canonical	3	219	junction_2	52.8288641642889	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGTTTCTGTTCCCTGGG	NA	False	NA	14	True	ACTAAA	-14	NA	18810180	18816701	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_18812163_18813966_18815227_18815843_18815919_18816200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000149986	chr7	+	3745	3	NIC	ENSMUSG00000030410.17	novel	2388	4	NA	NA	-2	2	intron_retention	FALSE	canonical	3	165	junction_2	90.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTTCTGTTCCCTGGGGC	NA	False	NA	16	True	ACTAAA	-16	NA	18810180	18816703	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_18812163_18813966_18815227_18816200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150018	chr7	+	519	3	FSM	ENSMUSG00000040824.4	ENSMUST00000049294.4	1420	3	94	807	-43	-807	multi-exon	FALSE	canonical	3	3249	junction_1	86	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGGTCTTCTCTGCTC	NA	False	NA	10	True	AATAAA	-28	NA	18883740	18886660	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_18883820_18885142_18885323_18886400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150031	chr7	+	2253	19	FSM	ENSMUSG00000040811.16	ENSMUST00000120595.8	2255	19	2	0	2	0	multi-exon	FALSE	canonical	3	61	junction_1	24.7224719088515	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGAGTCTGGTCTATT	NA	False	NA	25	True	AATACA	-17	NA	18915096	18940407	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_18915149_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150039	chr7	+	2271	19	NIC	ENSMUSG00000040811.16	novel	2255	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	33.4490583749803	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGAGTCTGGTCTATT	NA	False	NA	25	True	AATACA	-17	NA	18915140	18940407	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_18915211_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150051	chr7	+	3394	2	FSM	ENSMUSG00000052214.10	ENSMUST00000063976.9	3366	2	-14	-14	-14	14	multi-exon	FALSE	canonical	3	147	junction_1	0	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTTGTGTGTGCTTTT	3219	False	NA	23	True	AATAAA	-28	NA	18962244	18981807	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_18962510_18978678
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150065	chr7	-	1776	11	NNC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	142	junction_8	402.203443545676	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCTGGAGTACTTTAAA	NA	False	NA	NA	False	AATAAA	-24	NA	19005742	18990853	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994796_18998450_18998496_18998578_18998751_19005438
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150069	chr7	-	2325	12	NIC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	1236	junction_8	113.43276306049	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCTGGAGTACTTTAAA	NA	False	NA	NA	False	AATAAA	-24	NA	19005742	18990853	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150072	chr7	-	2956	13	FSM	ENSMUSG00000030403.10	ENSMUST00000032561.9	2215	13	-741	0	-741	0	multi-exon	FALSE	canonical	3	1236	junction_9	117.461666323765	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCTGGAGTACTTTAAA	NA	False	NA	NA	False	AATAAA	-24	NA	19006483	18990853	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150084	chr7	-	2251	13	NNC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	-39	0	at_least_one_novel_splicesite	TRUE	canonical	3	243	junction_7	341.113250988583	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCTGGAGTACTTTAAA	NA	False	NA	NA	False	AATAAA	-24	NA	19005781	18990853	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994604_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150106	chr7	+	1069	10	FSM	ENSMUSG00000003549.10	ENSMUST00000003645.9	1375	10	306	0	-17	0	multi-exon	TRUE	canonical	3	315	junction_9	39.5851948880006	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGGCTCTGCGTGTTT	1017	False	NA	15	True	AATAAA	-20	NA	19079008	19090449	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_19079122_19079530_19079643_19082325_19082542_19084085_19084190_19084617_19084718_19086553_19086631_19088250_19088351_19089025_19089098_19089217_19089287_19090343
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150122	chr7	-	2195	4	NNC	ENSMUSG00000047649.10	novel	2239	3	NA	NA	13	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	112.490987293304	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTACTTTTGATACATG	2171	False	NA	-12	True	NA	NA	NA	19093393	19089931	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_-_19090087_19090124_19091942_19093014_19093157_19093312
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150134	chr7	-	190	1	Intergenic	novelGene_4656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACAGAGTTCAAAGCTGG	4401	False	NA	NA	False	NA	NA	NA	19113979	19113789	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_19113800_19114000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150138	chr7	+	3576	23	FSM	ENSMUSG00000030400.18	ENSMUST00000062831.16	3578	23	7	-5	-1	5	multi-exon	TRUE	canonical	3	88	junction_1	20.1272809394744	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCTTCTGATATTTTTG	NA	False	NA	18	True	AATAAA	-26	NA	19115941	19129624	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_19115985_19116203_19116304_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121423_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127626_19127700_19127845_19127963_19128108_19128276
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150173	chr7	+	777	6	FSM	ENSMUSG00000002043.18	ENSMUST00000002112.15	785	6	8	0	-6	0	multi-exon	FALSE	canonical	3	436	junction_1	62.2009646227452	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCAGTGCTTATCACA	515	False	NA	21	True	AGTAAA	-22	NA	19242644	19250070	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_19242758_19248125_19248194_19248346_19248465_19248931_19249016_19249128_19249223_19249770
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150207	chr7	+	1561	3	FSM	ENSMUSG00000011267.9	ENSMUST00000108453.2	1530	3	-31	0	-31	0	multi-exon	FALSE	canonical	3	235	junction_1	5.5	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGACTTTCTTGGGGT	696	False	NA	26	True	AATAAA	-21	NA	19311180	19314581	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_19311554_19311741_19311886_19313537
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150218	chr7	-	2175	21	FSM	ENSMUSG00000061028.8	ENSMUST00000086041.7	2180	21	5	0	5	0	multi-exon	TRUE	canonical	3	161	junction_6	32.5501152071694	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTCCCCTTATTTAG	NA	False	NA	-1	True	AATAAA	-29	NA	19338406	19314959	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150222	chr7	-	2413	20	NIC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	-6	0	intron_retention	FALSE	canonical	3	190	junction_19	27.1360581324836	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATGCTGTCCCCTTATT	NA	False	NA	-4	True	AATAAA	-26	NA	19338394	19314962	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150237	chr7	-	2329	11	NIC	ENSMUSG00000002983.18	novel	2200	11	NA	NA	-17	1	combination_of_known_junctions	FALSE	canonical	3	70	junction_10	54.7927002437368	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGGTCTTCTTTCTTCTTT	NA	False	NA	0	True	AATAAA	-21	NA	19362376	19340140	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361847_19361896_19362000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150253	chr7	-	2180	11	FSM	ENSMUSG00000002983.18	ENSMUST00000049912.15	2200	11	15	5	15	1	multi-exon	FALSE	canonical	3	48	junction_10	60.3088716525189	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTGGGGGTCTTCTTTC	NA	False	NA	-6	True	AATAAA	-15	NA	19363348	19340146	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361847_19361896_19363115
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150259	chr7	-	4132	14	FSM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	0	11	0	4	multi-exon	FALSE	canonical	3	1363	junction_5	136.704319631521	417	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCACCATGTACTGTCCC	5148	False	NA	NA	False	AAAACA	-6	NA	19398958	19365506	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150275	chr7	-	443	4	FSM	ENSMUSG00000040564.15	ENSMUST00000045035.12	432	4	-11	0	-11	0	multi-exon	FALSE	canonical	3	965	junction_3	145.90027035235	195	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGAAGTGCTTTGG	NA	False	NA	-4	True	AATAAA	-19	NA	19426596	19423405	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_19423562_19425812_19425961_19426335_19426412_19426533
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150291	chr7	-	1250	4	FSM	ENSMUSG00000002985.17	ENSMUST00000174064.9	1408	4	3	155	3	3	multi-exon	FALSE	canonical	3	8700	junction_3	835.854984764436	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGTGAGTGATTCCAA	NA	False	NA	-22	True	AATAAA	-22	NA	19433110	19430188	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_19431029_19431403_19431573_19432112_19432179_19432935
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150306	chr7	-	1181	5	FSM	ENSMUSG00000002985.17	ENSMUST00000172983.8	817	5	-14	-350	0	2	multi-exon	FALSE	canonical	3	31	junction_4	5193.26072906031	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAGTCTCTGTGAGTGA	NA	False	NA	-28	True	AATAAA	-16	NA	19432977	19430194	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_19431029_19431403_19431573_19432112_19432179_19432328_19432399_19432935
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150308	chr7	-	1256	5	NNC	ENSMUSG00000002985.17	novel	817	5	NA	NA	0	2	intron_retention	FALSE	canonical	3	30	junction_4	5193.51332794092	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAGTCTCTGTGAGTGA	NA	False	NA	-28	True	AATAAA	-16	NA	19432977	19430194	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_-_19431029_19431403_19431573_19432112_19432179_19432328_19432474_19432935
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150317	chr7	-	1488	3	FSM	ENSMUSG00000002985.17	ENSMUST00000174710.2	514	3	-4	-970	-2	2	multi-exon	FALSE	canonical	3	8700	junction_2	860.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAGTCTCTGTGAGTGA	NA	False	NA	-28	True	AATAAA	-16	NA	19432979	19430194	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_19431573_19432112_19432179_19432935
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150335	chr7	-	1604	10	FSM	ENSMUSG00000002984.18	ENSMUST00000093552.12	1577	10	-20	-7	-20	7	multi-exon	TRUE	canonical	3	2342	junction_9	200.868177398407	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTCGGTTTTCTCCAGTT	9861	False	NA	-6	True	NA	NA	NA	19449383	19435230	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447687_19448217_19448286_19448905_19449185_19449282
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150342	chr7	-	1692	9	FSM	ENSMUSG00000002984.18	ENSMUST00000032555.10	1646	9	-30	-16	-17	0	multi-exon	FALSE	canonical	3	2643	junction_3	135.037899772619	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGAGGCCTCGGTTTTC	9864	False	NA	-13	True	NA	NA	NA	19449380	19435237	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447687_19448217_19448286_19448905
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150364	chr7	-	2675	9	FSM	ENSMUSG00000062300.15	ENSMUST00000075447.14	2735	9	43	17	3	-17	multi-exon	FALSE	canonical	3	309	junction_4	306.654528745297	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGTGTTTTCTGTGAGA	NA	False	NA	-19	True	GATAAA	-1	NA	19483455	19450585	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_19451713_19453120_19453208_19453357_19453422_19455277_19455432_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19483139
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150369	chr7	-	1986	6	FSM	ENSMUSG00000062300.15	ENSMUST00000108450.5	1955	6	-27	-4	13	4	multi-exon	FALSE	canonical	3	559	junction_1	167.41517255016	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTTTTGTAATCCATC	NA	False	NA	0	True	AATAAA	-20	NA	19483485	19458081	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_19458795_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19483139
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150384	chr7	+	196	1	Intergenic	novelGene_4657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTGAGTCACCACACCTGA	9198	False	NA	NA	False	NA	NA	NA	19472498	19472694	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_19472500_19472700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150389	chr7	+	194	1	Intergenic	novelGene_4658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAGAAGAGTCGGCATGT	NA	False	NA	NA	False	NA	NA	NA	19487325	19487519	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_19487300_19487500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150408	chr7	+	192	1	Intergenic	novelGene_4659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTGAGATGGCTCAG	2705	False	NA	NA	False	NA	NA	NA	19520610	19520802	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_19520600_19520800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150411	chr7	+	195	1	Intergenic	novelGene_4660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACTGACAACCAGGTTG	2897	False	NA	NA	False	NA	NA	NA	19520802	19520997	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_19520800_19521000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150414	chr7	-	191	1	Intergenic	novelGene_4661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTGCTTTGAGACAGG	NA	False	NA	NA	False	NA	NA	NA	19525601	19525410	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_19525400_19525600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150443	chr7	-	2894	8	FSM	ENSMUSG00000040511.15	ENSMUST00000043517.8	2905	8	11	0	11	0	multi-exon	FALSE	canonical	3	90	junction_4	10.2359909243845	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATTGTCCGAGCCTTTG	9942	False	NA	-1	True	NA	NA	NA	19655074	19637502	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_19639118_19639703_19639739_19643105_19643229_19644529_19644682_19648662_19648790_19650798_19651096_19652486_19652835_19654877
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150451	chr7	+	186	1	Intergenic	novelGene_4662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATAGTAGCAAGGGTTGAG	2283	False	NA	NA	False	NA	NA	NA	19667748	19667934	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_19667700_19667900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150456	chr7	+	3592	11	NIC	ENSMUSG00000060508.17	novel	3346	10	NA	NA	-21	2	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	8.2516664983505	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGTTTCCTCAATGAAT	NA	False	NA	3	True	AATAAA	-22	NA	19725368	19796867	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_19725614_19741948_19742019_19753034_19753368_19757035_19758615_19760440_19760606_19762379_19762545_19776275_19776444_19779686_19779858_19782606_19782778_19783348_19783520_19796513
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150462	chr7	+	3919	5	FSM	ENSMUSG00000057101.9	ENSMUST00000068975.6	3901	5	-22	4	-22	-4	multi-exon	FALSE	canonical	3	55	junction_2	15.0499169432924	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTCCCACTTGTTTGA	NA	False	NA	NA	False	AATAAA	-26	NA	23781326	23807134	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_23781664_23784850_23784932_23797245_23797321_23800872_23800994_23803829
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150481	chr7	+	3443	4	FSM	ENSMUSG00000047603.10	ENSMUST00000056549.9	3373	4	-67	-3	1	3	multi-exon	TRUE	canonical	3	32	junction_3	6.18241233033047	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTCTCATCCTTTCCC	NA	False	NA	9	True	AATAAA	-17	NA	23833599	23842669	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_23833913_23834682_23834741_23836470_23836598_23839724
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150488	chr7	-	2704	4	FSM	ENSMUSG00000087598.10	ENSMUST00000086006.12	6402	4	-14	3712	-14	423	multi-exon	TRUE	canonical	3	37	junction_1	10.4986771653491	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTAGTCTTTTTTATTGT	NA	False	NA	NA	False	TATAAA	-30	NA	23907588	23897083	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_23899468_23902794_23902922_23906482_23906541_23907453
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150502	chr7	+	2250	14	FSM	ENSMUSG00000002210.12	ENSMUST00000002280.11	2242	14	-8	0	-8	0	multi-exon	TRUE	canonical	3	128	junction_3	14.7828462881374	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGGTTTGTTCTTTCTC	NA	False	NA	19	True	AATAAA	-19	NA	24099035	24122203	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_24099317_24102816_24102973_24104951_24105027_24105112_24105378_24105459_24105558_24106945_24107059_24114363_24114476_24115923_24116020_24116345_24116432_24119438_24119546_24120000_24120109_24120237_24120367_24120544_24120690_24121724
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150517	chr7	-	169	1	Intergenic	novelGene_4663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTCTACAAAGTTGATTGA	NA	False	NA	NA	False	NA	NA	NA	24160140	24159971	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_24160000_24160100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150522	chr7	+	1505	7	FSM	ENSMUSG00000046223.11	ENSMUST00000002284.11	1506	7	2	-1	1	0	multi-exon	FALSE	canonical	3	18	junction_3	5.84284938098603	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCTAGGTCTCTTAC	NA	False	NA	NA	False	NA	NA	NA	24161910	24175393	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_24161993_24164555_24164667_24166099_24166244_24171323_24171480_24171997_24172133_24173634_24173782_24174663
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150528	chr7	+	200	1	Intergenic	novelGene_4664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCAGTCTGAGGCGGGG	NA	False	NA	NA	False	NA	NA	NA	24162886	24163086	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_24162900_24163100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150544	chr7	+	1396	4	NNC	ENSMUSG00000064264.15	novel	1159	3	NA	NA	-10	-13	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_1	89.1777251709566	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCTCCGCATATGTTC	NA	False	NA	21	True	AATAAA	-15	NA	24206513	24215092	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_+_24206862_24208193_24208403_24209970_24210179_24214461
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150545	chr7	+	1187	3	FSM	ENSMUSG00000064264.15	ENSMUST00000177205.2	1159	3	-41	13	-10	-13	multi-exon	FALSE	canonical	3	276	junction_2	107	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCTCCGCATATGTTC	NA	False	NA	21	True	AATAAA	-15	NA	24206513	24215092	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_24206862_24209970_24210179_24214461
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150548	chr7	+	1148	3	FSM	ENSMUSG00000064264.15	ENSMUST00000071361.13	1182	3	19	15	-10	-13	multi-exon	FALSE	canonical	3	407	junction_2	41.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCTCCGCATATGTTC	NA	False	NA	21	True	AATAAA	-15	NA	24206513	24215092	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_24206862_24209970_24210179_24214500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150564	chr7	+	181	1	Intergenic	novelGene_4665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACAAGATTGCTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	24239639	24239820	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_24239600_24239800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150585	chr7	+	2105	17	NNC	ENSMUSG00000051768.10	novel	2155	17	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_12	88.4257280150975	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACGGTTTCTCTCTTAGG	NA	False	NA	5	True	AATAAA	-17	NA	24246619	24272861	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270299_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150595	chr7	-	185	1	Intergenic	novelGene_4666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGTGACTTATGATCAA	2061	False	NA	0	True	NA	NA	NA	24297335	24297150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_24297200_24297300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150608	chr7	+	496	1	FSM	ENSMUSG00000091955.3	ENSMUST00000170837.3	485	1	-11	0	-11	0	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCATGATTAAACTCCTGG	NA	False	NA	NA	False	AATAAA	-34	NA	24561626	24562122	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_24561600_24562100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150615	chr7	+	607	6	FSM	ENSMUSG00000040952.17	ENSMUST00000108430.10	774	6	173	-6	-89	6	multi-exon	FALSE	canonical	3	8873	junction_5	7497.54368843557	2164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGATCTGGTTTTGGTTT	NA	False	NA	32	True	AATAAA	-22	NA	24583968	24589237	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_24584093_24584560_24584632_24584876_24584978_24587706_24587891_24588331_24588387_24589165
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150625	chr7	+	593	7	FSM	ENSMUSG00000040952.17	ENSMUST00000129847.8	593	7	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_3	8759.20174096298	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	False	NA	26	True	AATAAA	-16	NA	24584057	24589231	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_24584093_24584560_24584632_24584876_24584978_24585531_24585613_24587706_24587891_24588331_24588387_24589165
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150637	chr7	+	683	6	FSM	ENSMUSG00000040952.17	ENSMUST00000108429.8	633	6	-50	0	13	0	multi-exon	FALSE	canonical	3	279	junction_1	10447.7852504729	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	False	NA	26	True	AATAAA	-16	NA	24584088	24589231	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_24584295_24584560_24584632_24584876_24584978_24587706_24587891_24588331_24588387_24589165
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150649	chr7	+	3221	29	FSM	ENSMUSG00000040940.19	ENSMUST00000047873.16	3212	29	-6	-3	-6	0	multi-exon	FALSE	canonical	3	35	junction_1	58.1352662647508	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGTGTGTGAGGGCG	8548	False	NA	34	True	AATATA	-16	NA	24602455	24626017	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_24602554_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150659	chr7	+	3278	29	FSM	ENSMUSG00000040940.19	ENSMUST00000117419.8	3214	29	-62	-2	-11	0	multi-exon	FALSE	canonical	3	251	junction_1	33.6220742600902	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGGCGTT	9862	False	NA	36	True	AATATA	-18	NA	24603769	24626019	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150675	chr7	-	827	5	FSM	ENSMUSG00000003380.12	ENSMUST00000076961.9	899	5	76	-4	-40	4	multi-exon	FALSE	canonical	3	706	junction_2	24.5051015096857	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTGGTATTTTCTCTT	4571	False	NA	-1	True	AATAAA	-28	NA	24672103	24669172	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_24669435_24669511_24669614_24671185_24671284_24671526_24671740_24671951
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150688	chr7	+	192	1	Intergenic	novelGene_4667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCTGACTGCTCTTCCA	NA	False	NA	NA	False	NA	NA	NA	24675400	24675592	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_24675400_24675600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150693	chr7	-	3578	23	FSM	ENSMUSG00000040907.16	ENSMUST00000080882.11	3621	23	45	-2	-6	2	multi-exon	FALSE	canonical	2	6	junction_18	15.2038490124504	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGTTATGCTTGC	NA	False	NA	1	True	AATATA	-20	NA	24705338	24677589	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_24678002_24678338_24678431_24678719_24678822_24679434_24679566_24679975_24680122_24680943_24681068_24681166_24681322_24686859_24687029_24687402_24687554_24688992_24689130_24689213_24689390_24689787_24689981_24693556_24693692_24693774_24693885_24693960_24694160_24696556_24696826_24696937_24697056_24698098_24698234_24698324_24698439_24700001_24700206_24700344_24700405_24700496_24700584_24705179
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150708	chr7	+	3100	2	FSM	ENSMUSG00000045252.12	ENSMUST00000179556.2	4140	2	29	1011	29	1	multi-exon	FALSE	canonical	3	224	junction_1	0	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTGTCAGGCCTAGC	4984	False	NA	23	True	AATAAA	-19	NA	24776658	24781906	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_24776812_24778959
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150738	chr7	-	2226	11	FSM	ENSMUSG00000057177.13	ENSMUST00000071739.12	2260	11	34	0	34	0	multi-exon	FALSE	canonical	3	276	junction_10	34.6278789416851	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGGCTGCCTGTG	NA	False	NA	0	True	AATAAA	-21	NA	24937242	24927682	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_24928356_24928889_24928998_24929275_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933252_24933337_24934977_24935166_24936802
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150760	chr7	+	183	1	Intergenic	novelGene_4668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAACAACAGCAGCAAAC	NA	False	NA	NA	False	NA	NA	NA	24962049	24962232	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_24962000_24962200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150771	chr7	-	851	6	FSM	ENSMUSG00000005447.13	ENSMUST00000005583.12	901	6	52	-2	0	2	multi-exon	TRUE	canonical	3	245	junction_5	66.0714764478591	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTTCTGCTTTATGGT	8551	False	NA	0	True	ATTAAA	-17	NA	24997359	24994471	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_24994802_24995545_24995669_24995745_24995863_24996510_24996601_24996796_24996896_24997267
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150803	chr7	+	1464	6	FSM	ENSMUSG00000057229.12	ENSMUST00000077338.12	1465	6	1	0	1	0	multi-exon	FALSE	canonical	3	84	junction_1	20.2938414303453	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGGCCTTTCCTCCCA	1740	False	NA	39	True	NA	NA	NA	25318839	25324976	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_25318886_25320320_25320518_25321768_25321850_25323223_25323364_25323451_25323615_25324139
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150812	chr7	-	1692	9	FSM	ENSMUSG00000060376.8	ENSMUST00000071329.8	1899	9	213	-6	213	6	multi-exon	FALSE	canonical	3	232	junction_4	24.6373699895098	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTCGTCTCTGTTTCCT	9895	False	NA	-3	True	AGTAAA	-25	NA	25358193	25329364	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_25329859_25330424_25330597_25330766_25330909_25331062_25331270_25332664_25332827_25337586_25337696_25340881_25340969_25341068_25341252_25358057
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150869	chr7	-	4172	15	FSM	ENSMUSG00000040725.14	ENSMUST00000206832.2	3784	15	-388	0	-388	0	multi-exon	FALSE	canonical	3	866	junction_14	88.3957070247654	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCAGGGTTGAAACCCT	9696	False	NA	-28	True	AATAAA	-25	NA	25454570	25420589	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150886	chr7	+	173	1	Antisense	novelGene_ENSMUSG00000040725.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCATAATTACCAAAAAAAGT	NA	False	NA	NA	False	AGTAAA	-40	NA	25420997	25421170	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr7_+_25421000_25421200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150892	chr7	+	204	1	Intergenic	novelGene_4669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATCCTTTCCCCTGATCT	NA	False	NA	NA	False	NA	NA	NA	25426584	25426788	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_25426600_25426800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150904	chr7	-	2648	9	FSM	ENSMUSG00000040703.12	ENSMUST00000043314.10	2745	9	99	-2	4	2	multi-exon	FALSE	canonical	3	20	junction_7	4.7368238303741	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACCCCCTCTGCCTGTGT	1703	False	NA	-4	True	AATAAA	-20	NA	25515979	25501897	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_25503185_25503340_25503483_25505295_25505484_25507468_25507611_25508603_25508784_25508862_25509024_25511026_25511177_25514309_25514476_25515747
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150909	chr7	-	212	1	Antisense	novelGene_ENSMUSG00000097017.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGACCAGGGATTT	NA	False	NA	NA	False	NA	NA	NA	25517974	25517762	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr7_-_25517800_25518000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150923	chr7	-	104	1	Intergenic	novelGene_4670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTCTTAGCTCCGTCT	NA	False	NA	0	True	NA	NA	NA	26410650	26410546	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_26410500_26410600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150930	chr7	+	140	1	Intergenic	novelGene_4671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTTTATAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	26851254	26851394	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_26851300_26851400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150935	chr7	-	2092	6	FSM	ENSMUSG00000058709.12	ENSMUST00000080058.11	2107	6	17	-2	17	2	multi-exon	FALSE	canonical	3	451	junction_5	57.8840219749803	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTATTCCTCTCTGTA	NA	False	NA	-1	True	AATAAA	-22	NA	26866210	26858080	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864044_26865154_26866108
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150950	chr7	-	1704	6	NNC	ENSMUSG00000058709.12	novel	2107	6	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	232.127206505399	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGTATTCCTCTCTG	NA	False	NA	-3	True	AATAAA	-20	NA	26866187	26858082	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864407_26865154_26866108
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150964	chr7	-	2092	6	FSM	ENSMUSG00000058709.12	ENSMUST00000108382.2	1756	6	-6	-330	-6	0	multi-exon	FALSE	canonical	3	45	junction_5	218.816452763498	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGTATTCCTCTCTG	NA	False	NA	-3	True	AATAAA	-20	NA	26865844	26858082	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864044_26865154_26865740
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000150975	chr7	-	1192	8	FSM	ENSMUSG00000053291.16	ENSMUST00000093040.13	1192	8	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_1	28.7402157263998	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGGCCTCTGTCATTCTG	NA	False	NA	-1	True	CATAAA	-19	NA	26878321	26867848	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875319_26875582_26875664_26878151
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151004	chr7	-	1268	7	FSM	ENSMUSG00000061479.16	ENSMUST00000122202.8	1336	7	69	-1	-23	1	multi-exon	FALSE	canonical	3	597	junction_6	627.600567417065	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTGTCTGCTTTATT	NA	False	NA	-7	True	ATTAAA	-27	NA	26895601	26886430	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26894868_26894982_26895418
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151005	chr7	-	1295	6	FSM	ENSMUSG00000061479.16	ENSMUST00000163311.9	1288	6	-6	-1	-6	1	multi-exon	FALSE	canonical	3	2141	junction_5	100.882902416614	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTGTCTGCTTTATT	NA	False	NA	-7	True	ATTAAA	-27	NA	26895191	26886430	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26894868
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151021	chr7	-	3247	7	FSM	ENSMUSG00000003752.10	ENSMUST00000003850.8	3247	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	5.28099317258495	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGGGTATTTTCTTGG	NA	False	NA	-2	True	AATAAA	-15	NA	26928053	26906596	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_26907870_26911736_26911809_26912384_26912487_26913800_26914006_26916376_26916591_26919024_26919128_26926775
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151025	chr7	+	2199	15	FSM	ENSMUSG00000003762.14	ENSMUST00000003860.13	2181	15	-18	0	-18	0	multi-exon	TRUE	canonical	3	74	junction_1	14.7544528041883	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTTCTCTCTGTGCTA	NA	False	NA	22	True	AATAAA	-22	NA	26932429	26957375	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_26932599_26932889_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956647
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151043	chr7	+	193	1	Intergenic	novelGene_4672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAAAAGGATATGTTCT	NA	False	NA	NA	False	NA	NA	NA	26947866	26948059	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_26947900_26948100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151060	chr7	+	185	1	Intergenic	novelGene_4673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCATCAAAGAAAATAGAACC	NA	False	NA	17	True	NA	NA	NA	26995021	26995206	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_26995000_26995200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151097	chr7	+	186	1	Intergenic	novelGene_4674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAAACCAACCCCCTCCC	NA	False	NA	NA	False	NA	NA	NA	27014525	27014711	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_27014500_27014700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151121	chr7	-	2433	17	NIC	ENSMUSG00000089832.9	novel	2358	18	NA	NA	-16	-2	intron_retention	FALSE	canonical	3	272	junction_5	30.165623543199	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTATAGTCTTGGTT	NA	False	NA	-30	True	AATAAA	-15	NA	27055395	27041559	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_27041970_27042070_27042186_27042667_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27055052_27055295
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151135	chr7	-	166	1	Intergenic	novelGene_4675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCAGTGAAGGCTCTAGT	NA	False	NA	1	True	AATAAA	-23	NA	27080590	27080424	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_27080400_27080600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151139	chr7	+	200	1	Intergenic	novelGene_4676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGGCCAGGCAGTGGTGG	7561	False	NA	NA	False	NA	NA	NA	27141141	27141341	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_27141100_27141300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151149	chr7	+	199	1	Intergenic	novelGene_4677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAATTGTGATGGGGCAAA	8544	False	NA	NA	False	NA	NA	NA	27142124	27142323	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_27142100_27142300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151162	chr7	+	1329	2	FSM	ENSMUSG00000055200.8	ENSMUST00000068641.8	1329	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGAATTGTAATTAAATCT	NA	False	NA	84	True	AATAAA	-16	NA	27173192	27176789	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_27173297_27175564
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151176	chr7	+	182	1	Intergenic	novelGene_4678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGATAAATAAATAAAGGCA	525	False	NA	NA	False	NA	NA	NA	27195678	27195860	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_27195700_27195900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151181	chr7	+	4479	3	FSM	ENSMUSG00000053198.15	ENSMUST00000065487.7	4497	3	18	0	18	0	multi-exon	FALSE	canonical	3	33	junction_2	5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATGTGTCTTGGTTCTCG	NA	False	NA	NA	False	AATAAA	-15	NA	27207248	27219466	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_27207529_27214675_27214873_27215464
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151186	chr7	+	251	1	Intergenic	novelGene_4679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGCTCATAAGGACTAT	NA	False	NA	NA	False	NA	NA	NA	27208949	27209200	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_27208900_27209200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151192	chr7	-	2123	14	FSM	ENSMUSG00000003363.16	ENSMUST00000117095.8	2282	14	158	1	-38	-1	multi-exon	FALSE	canonical	3	277	junction_13	66.1410542194063	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTATGAGATGGTATGT	NA	False	NA	0	True	AGTAAA	-30	NA	27252479	27231425	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27244612_27244688_27252422
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151199	chr7	-	2135	14	NIC	ENSMUSG00000003363.16	novel	2282	14	NA	NA	-30	-4	combination_of_known_junctions	FALSE	canonical	3	19	junction_13	126.954541554455	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTGGTATGAGATGGTA	NA	False	NA	-3	True	AGTAAA	-27	NA	27252471	27231428	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27244612_27244711_27252422
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151205	chr7	-	2021	13	NIC	ENSMUSG00000003363.16	novel	2282	14	NA	NA	-26	-16	combination_of_known_junctions	FALSE	canonical	3	22	junction_12	130.304211367093	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGCTTAACTGAGTGG	NA	False	NA	-15	True	AGTAAA	-15	NA	27252467	27231440	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27252422
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151210	chr7	+	2685	10	FSM	ENSMUSG00000049643.16	ENSMUST00000067386.14	2701	10	16	0	16	0	multi-exon	FALSE	canonical	3	300	junction_8	25.2899238218224	334	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTCTGTGTATGT	412	False	NA	NA	False	AATAAA	-20	NA	27252673	27281524	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274015_27274166_27278137_27278209_27279761
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151224	chr7	-	192	1	Intergenic	novelGene_4680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	585	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTTTTGTTTTTTG	NA	False	NA	-1	True	NA	NA	NA	27286320	27286128	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_27286100_27286300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151233	chr7	+	3037	14	FSM	ENSMUSG00000004056.16	ENSMUST00000108344.9	4544	14	135	1372	-59	1	multi-exon	FALSE	canonical	3	377	junction_6	55.340153093199	499	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCCACATTTCCTTAG	NA	False	NA	NA	False	AATAAA	-22	NA	27291111	27338879	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151264	chr7	+	3883	5	FSM	ENSMUSG00000037640.16	ENSMUST00000108336.8	5896	5	0	2013	0	1228	multi-exon	FALSE	canonical	3	74	junction_1	38.9422649572415	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCTGGCTCCATTTTC	NA	False	NA	37	True	NA	NA	NA	27430813	27451114	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_27430896_27436360_27436414_27437727_27437855_27440381_27440481_27447592
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151276	chr7	+	3821	5	FSM	ENSMUSG00000078779.5	ENSMUST00000205701.2	3437	5	-48	-336	-48	336	multi-exon	FALSE	canonical	3	101	junction_4	40.2639727299729	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTGTTTATTTTGCAT	360	False	NA	-1	True	NA	NA	NA	27537983	27556199	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_27538135_27542259_27542313_27543709_27543837_27545828_27545928_27552808
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151290	chr7	+	94	1	Intergenic	novelGene_4681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTGTGAAAGTTGTCAGA	7246	False	NA	NA	False	NA	NA	NA	27681896	27681990	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_27681900_27682000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151295	chr7	-	4151	7	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-41	1650	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_3	44.8578000154067	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGAGTCCATTAAATATT	NA	False	NA	-3	True	AATAAA	-25	NA	27713581	27686486	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_-_27689948_27704643_27704743_27704891_27705052_27706738_27706866_27707808_27707862_27711760_27711876_27713445
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151298	chr7	-	3991	6	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-41	1650	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_5	28.6454184818445	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGAGTCCATTAAATATT	NA	False	NA	-3	True	AATAAA	-25	NA	27713581	27686486	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711760_27711876_27713445
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151311	chr7	-	3990	6	FSM	ENSMUSG00000096916.8	ENSMUST00000180502.8	6163	6	-41	2214	-41	1644	multi-exon	FALSE	canonical	3	64	junction_5	35.6482818660311	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATTGTGAGTCCATTA	NA	False	NA	-9	True	AATAAA	-19	NA	27713581	27686492	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711760_27711876_27713440
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151331	chr7	-	1426	11	FSM	ENSMUSG00000030603.17	ENSMUST00000032824.10	1440	11	14	0	14	0	multi-exon	FALSE	canonical	3	2113	junction_5	109.082033351052	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTCTTAGGTGTTTAAC	NA	False	NA	-4	True	AATAAA	-24	NA	27749512	27741131	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_27741346_27741525_27741582_27741763_27741933_27742074_27742152_27742233_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217_27748405_27748528_27748628_27749407
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151332	chr7	-	1537	10	NIC	ENSMUSG00000030603.17	novel	1440	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	2113	junction_4	111.139329750021	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTCTTAGGTGTTTAAC	NA	False	NA	-4	True	AATAAA	-24	NA	27749481	27741131	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_27741346_27741525_27741582_27741763_27742152_27742233_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217_27748405_27748528_27748628_27749407
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151345	chr7	+	179	1	Intergenic	novelGene_4682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAATCACCAACAGAG	4966	False	NA	NA	False	NA	NA	NA	27865569	27865748	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_27865600_27865700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151349	chr7	+	1225	9	FSM	ENSMUSG00000046865.8	ENSMUST00000042405.8	1197	9	-20	-8	-20	8	multi-exon	FALSE	canonical	3	2081	junction_3	279.620725269069	650	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGCCTATTGCTAAGTG	8511	False	NA	8	True	ATTAAA	-22	NA	27869114	27878702	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_27869244_27873928_27874112_27874209_27874318_27874408_27874504_27875279_27875451_27876567_27876701_27877629_27877743_27878322_27878469_27878555
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151371	chr7	+	215	1	Intergenic	novelGene_4683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCATCCTATTTTAAAAAT	NA	False	NA	NA	False	AAAAAG	-14	NA	27981721	27981936	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_27981700_27981900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151380	chr7	+	178	1	Intergenic	novelGene_4684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATTTAAAAAAAAAAGAGTA	NA	False	NA	NA	False	NA	NA	NA	27982447	27982625	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_27982400_27982600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151398	chr7	-	1491	10	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	0	2	intron_retention	FALSE	canonical	3	2125	junction_8	157.858586504926	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGTCCAGAGTCCAG	2672	False	NA	0	True	AATAAA	-21	NA	28011481	28005246	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151408	chr7	-	3766	29	FSM	ENSMUSG00000003435.10	ENSMUST00000209141.2	3755	29	-4	-7	-4	0	multi-exon	FALSE	canonical	3	668	junction_13	69.0304945924152	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACGAAGAGTTTTCTT	NA	False	NA	-8	True	AATAAA	-21	NA	28038135	28014315	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28029442_28029455_28030004_28030071_28030794_28030955_28037776
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151409	chr7	-	3580	30	FSM	ENSMUSG00000003435.10	ENSMUST00000003527.10	3513	30	-64	-3	-37	0	multi-exon	FALSE	canonical	3	628	junction_29	71.450522531579	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACGAAGAGTTTTCTT	NA	False	NA	-8	True	AATAAA	-21	NA	28038208	28014315	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28029442_28029455_28030004_28030071_28030794_28030955_28037776_28037861_28038119
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151426	chr7	-	4099	29	NIC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-9	0	intron_retention	FALSE	canonical	3	628	junction_28	72.0019132398861	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28038180	28014318	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28029442_28030071_28030794_28030955_28037776_28037861_28038119
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151427	chr7	-	3535	29	NIC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_25	152.559502443192	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28038178	28014318	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28030004_28030071_28030794_28030955_28037776_28037861_28038119
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151444	chr7	+	189	1	Intergenic	novelGene_4685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTATGATTAATTATG	NA	False	NA	NA	False	NA	NA	NA	28027109	28027298	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_28027100_28027300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151449	chr7	+	193	1	Intergenic	novelGene_4686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAGGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	28038757	28038950	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_28038800_28039000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151467	chr7	-	4970	19	FSM	ENSMUSG00000037552.18	ENSMUST00000119990.8	4880	19	-88	-2	-5	1	multi-exon	TRUE	canonical	1	3	junction_17	6.29643246040129	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTTGCCTTTCTTGAG	NA	False	NA	0	True	NA	NA	NA	28072007	28059027	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_28060687_28061232_28062134_28062250_28062425_28063722_28063740_28063895_28063935_28064009_28064058_28064149_28064252_28064341_28064376_28064706_28064794_28064877_28064971_28067059_28067261_28067398_28067537_28067715_28067867_28068103_28068151_28068245_28068313_28069485_28069587_28069662_28069920_28070539_28070671_28071284
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151475	chr7	-	1793	2	FSM	ENSMUSG00000044786.7	ENSMUST00000051241.7	2790	2	998	-1	0	1	multi-exon	FALSE	canonical	3	36	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAAATTTGTCTTTTTCG	6671	False	NA	-1	True	AATAAA	-19	NA	28078680	28076207	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_28077919_28078598
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151482	chr7	-	763	5	NNC	ENSMUSG00000003444.9	novel	1281	4	NA	NA	37	-586	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	249.415692168717	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTCCTGTTGCTGATTTG	NA	False	NA	-15	True	AATGAA	-23	NA	28092096	28086156	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_-_28086450_28086623_28086729_28090236_28090322_28090514_28090574_28091875
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151530	chr7	+	203	1	Intergenic	novelGene_4687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTCCAAAATTGAAACCA	4887	False	NA	NA	False	NA	NA	NA	28125415	28125618	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_28125400_28125600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151540	chr7	+	207	1	Intergenic	novelGene_4688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATACTATCACCTCACTAA	7639	False	NA	NA	False	NA	NA	NA	28128167	28128374	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_28128200_28128400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151556	chr7	-	189	1	Intergenic	novelGene_4689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTAATGAAATAAATAG	NA	False	NA	NA	False	NA	NA	NA	28162796	28162607	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_28162600_28162800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151564	chr7	-	3035	11	NIC	ENSMUSG00000030602.14	novel	2899	10	NA	NA	6	0	combination_of_known_junctions	TRUE	canonical	3	113	junction_9	227.845759231986	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTATGTGTGTGGT	4602	False	NA	-3	True	ATTAAA	-21	NA	28297604	28258243	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458_28267724_28269217_28269292_28269596_28269739_28297459
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151568	chr7	-	2926	10	FSM	ENSMUSG00000030602.14	ENSMUST00000108283.8	2899	10	-27	0	-27	0	multi-exon	FALSE	canonical	3	622	junction_9	35.4843036069349	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTATGTGTGTGGT	4569	False	NA	-3	True	ATTAAA	-21	NA	28297637	28258243	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458_28267724_28269217_28269292_28297459
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151584	chr7	+	182	1	Intergenic	novelGene_4690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACCTTTCTTGGCTGCA	6851	False	NA	NA	False	NA	NA	NA	28323254	28323436	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_28323300_28323400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151591	chr7	+	260	1	Intergenic	novelGene_4691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATGAAACCAAGTCTCCA	NA	False	NA	NA	False	ATTAAA	-25	NA	28346998	28347258	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_28347000_28347300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151597	chr7	-	177	1	Intergenic	novelGene_4692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTTTAAAAAAAGATA	9020	False	NA	NA	False	NA	NA	NA	28366533	28366356	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_28366400_28366500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151600	chr7	+	1967	6	NIC	ENSMUSG00000037463.15	novel	1946	6	NA	NA	-18	0	combination_of_known_junctions	TRUE	canonical	3	31	junction_1	12.2637677734047	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCATATCTTTTTCTT	8827	False	NA	NA	False	AATAAA	-19	NA	28392255	28398763	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_28392398_28392694_28393076_28394155_28394268_28394430_28394527_28396064_28396201_28397663
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151603	chr7	+	155	1	Intergenic	novelGene_4693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTATGGAGATGGATAC	NA	False	NA	NA	False	TTTAAA	-4	NA	28404073	28404228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_28404100_28404200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151618	chr7	+	1852	8	FSM	ENSMUSG00000030598.16	ENSMUST00000108278.9	1806	8	-40	-6	-12	0	multi-exon	FALSE	canonical	3	49	junction_7	33.4310133418242	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCAATTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	28416216	28437569	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28436763_28436972_28437089
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151633	chr7	-	721	3	FSM	ENSMUSG00000045948.9	ENSMUST00000056078.9	722	3	2	-1	2	0	multi-exon	FALSE	canonical	3	503	junction_2	218	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGTGCGGTGTCTGTC	1646	False	NA	-5	True	AATAAA	-24	NA	28441243	28439065	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_28439665_28440911_28440980_28441189
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151640	chr7	-	883	2	FSM	ENSMUSG00000045948.9	ENSMUST00000171183.2	883	2	0	0	0	0	multi-exon	FALSE	canonical	3	939	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGTGCGGTGTCTGTC	1694	False	NA	-5	True	AATAAA	-24	NA	28441195	28439065	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_28439665_28440911
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151661	chr7	-	1255	6	FSM	ENSMUSG00000030595.16	ENSMUST00000085851.12	1243	6	-12	0	-12	0	multi-exon	FALSE	canonical	3	539	junction_1	23.6761483354029	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCTTCCTGCTTATTT	NA	False	NA	1	True	AATAAA	-33	NA	28465951	28458456	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_28458630_28459251_28459522_28459601_28459691_28461026_28461361_28461450_28461557_28465668
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151679	chr7	-	159	1	Intergenic	novelGene_4694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTAAAAAAGAGCACTGAC	NA	False	NA	NA	False	NA	NA	NA	28493216	28493057	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_28493100_28493200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151690	chr7	+	4501	6	NIC	ENSMUSG00000015165.17	novel	2180	12	NA	NA	-6	-753	intron_retention	FALSE	canonical	3	4757	junction_2	530.686348043739	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTCTGTGTGTCCTG	NA	False	NA	NA	False	NA	NA	NA	28514242	28520912	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_28514621_28514704_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151695	chr7	+	4390	7	NIC	ENSMUSG00000015165.17	novel	1850	13	NA	NA	-6	-753	intron_retention	FALSE	canonical	3	4757	junction_3	512.533061264236	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTCTGTGTGTCCTG	NA	False	NA	NA	False	NA	NA	NA	28514242	28520912	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_28514621_28514704_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151701	chr7	+	4619	5	NIC	ENSMUSG00000015165.17	novel	2180	12	NA	NA	-6	-753	intron_retention	FALSE	canonical	3	4757	junction_2	589.262250615123	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTCTGTGTGTCCTG	NA	False	NA	NA	False	NA	NA	NA	28514242	28520912	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_28514621_28514704_28518350_28519577_28519700_28519969_28520172_28520640
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151716	chr7	+	1209	10	FSM	ENSMUSG00000053898.13	ENSMUST00000066264.13	1267	10	60	-2	60	2	multi-exon	TRUE	canonical	3	645	junction_5	36.3137901908447	274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTGTCTTTACTGCAGTG	NA	False	NA	16	True	AATAAA	-14	NA	28524701	28531674	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_28524838_28525298_28525504_28525609_28525699_28529224_28529350_28529426_28529476_28529638_28529704_28530641_28530713_28530813_28530886_28531141_28531293_28531428
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151731	chr7	-	3914	21	FSM	ENSMUSG00000054808.16	ENSMUST00000068045.14	3877	21	-36	-1	-36	1	multi-exon	FALSE	canonical	3	997	junction_13	138.805763569097	585	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGTCATCTTCTCCCT	NA	False	NA	0	True	AATAAA	-25	NA	28661801	28592671	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151770	chr7	+	231	1	Intergenic	novelGene_4695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGCAGGCCTGACCTAAG	NA	False	NA	NA	False	AAAAAG	-38	NA	28679073	28679304	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_28679100_28679300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151786	chr7	+	196	1	Intergenic	novelGene_4696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTAAAGTATGACAGACT	119	False	NA	NA	False	ATTAAA	-4	NA	28832504	28832700	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_28832500_28832700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151795	chr7	-	1282	8	FSM	ENSMUSG00000030590.16	ENSMUST00000164589.9	1293	8	11	0	11	0	multi-exon	FALSE	canonical	3	257	junction_3	23.9565934002925	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATCTTGTTTCTGTTAG	NA	False	NA	-1	True	AATAAA	-21	NA	28855648	28851934	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_28852273_28852746_28852915_28853843_28853961_28854040_28854119_28854576_28854783_28855099_28855235_28855309_28855456_28855554
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151811	chr7	-	1519	7	FSM	ENSMUSG00000030591.18	ENSMUST00000186182.2	1512	7	-6	-1	-6	1	multi-exon	FALSE	canonical	3	1581	junction_5	143.933626678719	337	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGTGTATCCAGTCTGG	NA	False	NA	-9	True	AATAAA	-16	NA	28880104	28873611	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_28874173_28874835_28874948_28875497_28875599_28876490_28876657_28878343_28878447_28878567_28878641_28879701
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151828	chr7	+	219	1	Intergenic	novelGene_4697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	28894150	28894369	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_28894200_28894400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151833	chr7	+	1158	8	FSM	ENSMUSG00000030588.13	ENSMUST00000032809.10	1111	8	-43	-4	-19	4	multi-exon	FALSE	canonical	3	488	junction_1	365.371993833067	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCACTTCTGACCGGCA	6018	False	NA	16	True	AATAAA	-19	NA	28937734	28946958	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_28937871_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151840	chr7	+	1130	8	FSM	ENSMUSG00000030588.13	ENSMUST00000108238.8	1126	8	0	-4	0	4	multi-exon	FALSE	canonical	3	755	junction_1	273.775194535329	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCACTTCTGACCGGCA	6037	False	NA	16	True	AATAAA	-19	NA	28937753	28946958	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_28937862_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151868	chr7	-	1374	6	FSM	ENSMUSG00000074227.13	ENSMUST00000108236.5	1211	6	-152	-11	-150	-7	multi-exon	FALSE	canonical	0	0	junction_2	398.697679953119	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGTTTTTTGTTTTTGT	317	False	NA	-5	True	AATAAA	-32	NA	28981487	28955754	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_28956263_28957592_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28980936
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151892	chr7	-	228	1	Intergenic	novelGene_4698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTTGTGAATTAAAATAC	6785	False	NA	NA	False	AAAAAG	-15	NA	28975019	28974791	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_28974800_28975000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151899	chr7	+	2271	11	NIC	ENSMUSG00000030584.15	novel	2309	12	NA	NA	12	0	combination_of_known_junctions	TRUE	canonical	3	21	junction_7	17.2568826848884	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTCCATCTCTAACCTC	1776	False	NA	10	True	ATTAAA	-26	NA	29003387	29017013	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_29003538_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013707_29013828_29015048_29015162_29015668_29015751_29015905
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151921	chr7	+	196	1	Intergenic	novelGene_4699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCTTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	29225340	29225536	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_29225300_29225500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151937	chr7	-	197	1	Antisense	novelGene_ENSMUSG00000046185.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAACACTTCCTTTCA	2637	False	NA	NA	False	TTTAAA	-4	NA	29478980	29478783	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr7_-_29478800_29479000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151961	chr7	-	3683	5	NIC	ENSMUSG00000062040.15	novel	3845	5	NA	NA	1	-105	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	15.9902313929474	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAAAGTGTACCTGGCCT	NA	False	NA	NA	False	AGTAAA	-19	NA	29605956	29592862	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_29595852_29598176_29598304_29599662_29599764_29603324_29603469_29605634
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151972	chr7	+	179	1	Intergenic	novelGene_4700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAACCCCTCAAGAC	NA	False	NA	NA	False	NA	NA	NA	29602307	29602486	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_29602300_29602500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151973	chr7	+	2589	5	FSM	ENSMUSG00000099689.7	ENSMUST00000186475.2	2614	5	25	0	25	0	multi-exon	FALSE	canonical	3	26	junction_4	3.53553390593274	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTAAGTTTCATAATTTTC	NA	False	NA	27	True	AATAAA	-24	NA	29607966	29616232	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_29608077_29609607_29609673_29611593_29611721_29612014_29612111_29614041
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151984	chr7	+	178	1	Intergenic	novelGene_4701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAGAATACAAA	NA	False	NA	NA	False	NA	NA	NA	29644880	29645058	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_29644900_29645100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151987	chr7	+	192	1	Intergenic	novelGene_4702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGCACCAGGGGATCTA	NA	False	NA	NA	False	NA	NA	NA	29647329	29647521	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_29647300_29647500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151992	chr7	-	188	1	Intergenic	novelGene_4703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAAAGACAAAAATTGG	NA	False	NA	NA	False	NA	NA	NA	29657060	29656872	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_29656900_29657100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000151994	chr7	-	184	1	Intergenic	novelGene_4704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTGGTTTTT	NA	False	NA	0	True	NA	NA	NA	29661388	29661204	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_29661200_29661400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152008	chr7	-	180	1	Intergenic	novelGene_4705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATACATGGCCCAGATCCA	NA	False	NA	6	True	NA	NA	NA	29672350	29672170	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_29672200_29672400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152010	chr7	+	7215	10	NIC	ENSMUSG00000074221.13	novel	4005	10	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	169	junction_6	29.7138617525039	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTCAAGACTCACTTTCTC	NA	False	NA	19	True	AATAAA	-22	NA	29683347	29727707	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_29683654_29684684_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713264_29713315_29714490_29714615_29716591_29716688_29721642
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152033	chr7	+	212	1	Intergenic	novelGene_4706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGATCGCCTTGATAC	NA	False	NA	NA	False	NA	NA	NA	29741360	29741572	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_29741400_29741600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152043	chr7	+	176	1	Intergenic	novelGene_4707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAATATATATATAT	NA	False	NA	NA	False	NA	NA	NA	29753655	29753831	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_29753700_29753800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152077	chr7	+	216	1	Intergenic	novelGene_4708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTCGAGACAGGGTT	NA	False	NA	NA	False	NA	NA	NA	29843802	29844018	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_29843800_29844000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152084	chr7	-	2955	2	NIC	ENSMUSG00000037029.9	novel	585	3	NA	NA	1	782	intron_retention	FALSE	canonical	3	14	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAAATCCTTCTTTATT	NA	False	NA	1	True	ATTAAA	-19	NA	29869151	29859911	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_29862799_29869083
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152098	chr7	+	374	4	FSM	ENSMUSG00000074218.4	ENSMUST00000098594.4	393	4	22	-3	22	3	multi-exon	FALSE	canonical	3	920	junction_1	139.802241279125	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCCAGCCTGTGTGTCTC	5696	False	NA	27	True	AATAAA	-28	NA	29883590	29885458	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_29883671_29884509_29884597_29884699_29884785_29885336
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152126	chr7	-	1153	10	FSM	ENSMUSG00000001794.14	ENSMUST00000108196.8	1192	10	39	0	39	0	multi-exon	FALSE	canonical	3	41	junction_9	490.288577155219	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGACTCTGAGTGCTGA	NA	False	NA	-28	True	AATAAA	-21	NA	29892492	29886414	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29892454
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152135	chr7	+	203	1	Intergenic	novelGene_4709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTCAGCCATACAAGTC	NA	False	NA	NA	False	NA	NA	NA	29889134	29889337	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_29889100_29889300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152145	chr7	+	191	1	Intergenic	novelGene_4710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTCCCAGAAACAGAG	NA	False	NA	NA	False	NA	NA	NA	29906037	29906228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_29906000_29906200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152150	chr7	+	217	1	Intergenic	novelGene_4711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTGTTCCCCTAAGAT	NA	False	NA	NA	False	NA	NA	NA	29907608	29907825	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_29907600_29907800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152159	chr7	+	191	1	Intergenic	novelGene_4712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCAACACTACAGGCCA	6401	False	NA	NA	False	NA	NA	NA	29914933	29915124	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_29914900_29915100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152168	chr7	-	940	6	FSM	ENSMUSG00000006095.13	ENSMUST00000006254.6	1416	6	477	-1	477	1	multi-exon	FALSE	canonical	3	839	junction_4	26.4529771481397	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAAGTCTCTTGATTCCA	NA	False	NA	-4	True	NA	NA	NA	29931220	29923554	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_29923773_29923897_29923971_29926268_29926461_29927028_29927126_29930550_29930695_29931004
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152174	chr7	+	198	1	Intergenic	novelGene_4713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTAAATTCCAAGCCAT	NA	False	NA	NA	False	NA	NA	NA	29927986	29928184	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_29928000_29928200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152184	chr7	+	863	6	FSM	ENSMUSG00000019738.16	ENSMUST00000019882.16	819	6	-40	-4	-40	4	multi-exon	FALSE	canonical	3	1146	junction_5	44.9239357136037	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCGTGTTTATTTCTCTC	NA	False	NA	22	True	AATAAA	-22	NA	29931332	29932819	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_29931830_29931906_29931962_29932174_29932249_29932331_29932407_29932491_29932544_29932709
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152195	chr7	-	4781	33	NIC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	9	0	combination_of_known_junctions	TRUE	canonical	1	41	junction_22	36.4423774608628	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979835	29939562	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_29939910_29940002_29940140_29940655_29941310_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152200	chr7	-	4735	33	NIC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	41	junction_22	30.5222607032556	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979846	29939562	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152212	chr7	+	179	1	Intergenic	novelGene_4714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTATTGTTGTTTTGT	221	False	NA	NA	False	NA	NA	NA	29944216	29944395	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_29944200_29944400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152215	chr7	+	1138	6	FSM	ENSMUSG00000042831.14	ENSMUST00000132193.8	1112	6	-25	-1	-14	0	multi-exon	FALSE	canonical	3	431	junction_1	28.3125413906982	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTGGATTTTTTTTT	NA	False	NA	9	True	AATAAA	-16	NA	30008187	30013729	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30012133_30013343
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152218	chr7	+	936	7	FSM	ENSMUSG00000042831.14	ENSMUST00000060834.12	982	7	46	0	-14	0	multi-exon	FALSE	canonical	3	231	junction_5	88.8144132446981	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTGGATTTTTTTTT	NA	False	NA	9	True	AATAAA	-16	NA	30008187	30013729	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30011814_30012015_30012133_30013343
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152237	chr7	+	1355	8	FSM	ENSMUSG00000019737.15	ENSMUST00000054594.15	1355	8	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_4	40.5593543401494	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGAGAATATCAGTACT	NA	False	NA	11	True	ATTAAA	-18	NA	30014240	30018471	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_30014512_30014686_30014826_30015654_30015799_30015997_30016193_30016267_30016517_30017392_30017468_30018097_30018157_30018248
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152271	chr7	-	2412	17	FSM	ENSMUSG00000006651.9	ENSMUST00000006828.9	2343	17	-67	-2	-67	2	multi-exon	TRUE	canonical	3	317	junction_16	59.4064390449386	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTGTTTCTGTTGGAGA	NA	False	NA	0	True	AATAAA	-22	NA	30145027	30134404	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_30134817_30134900_30135045_30135170_30135234_30135397_30135469_30135603_30135628_30136211_30136320_30137602_30137703_30139359_30139489_30139568_30139728_30140479_30140555_30141066_30141198_30141594_30141786_30141904_30142039_30142222_30142336_30142516_30142650_30143742_30143887_30144746
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152277	chr7	-	2907	15	FSM	ENSMUSG00000036915.18	ENSMUST00000045817.14	3352	15	451	-6	451	4	multi-exon	FALSE	canonical	3	10	junction_12	10.266102334521	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTGTGAAAGACCTCC	NA	False	NA	NA	False	AATAAA	-22	NA	30156489	30146954	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_30147880_30149261_30149328_30149802_30149904_30150226_30150326_30152105_30152326_30152478_30152580_30152836_30152970_30153060_30153189_30153438_30153588_30153662_30153769_30153933_30154085_30154596_30154758_30154889_30155040_30155844_30155995_30156222
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152289	chr7	+	183	1	Antisense	novelGene_ENSMUSG00000036864.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAGCATACAAATGA	NA	False	NA	NA	False	NA	NA	NA	30250987	30251170	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr7_+_30251000_30251200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152305	chr7	-	693	4	FSM	ENSMUSG00000036835.8	ENSMUST00000043898.8	708	4	15	0	15	0	multi-exon	FALSE	canonical	3	560	junction_3	125.517595048131	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGAGTTCTTGGGATCTT	1305	False	NA	-5	True	AATAAA	-17	NA	30262651	30261289	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_30261560_30261748_30261854_30262220_30262364_30262476
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152317	chr7	+	877	8	FSM	ENSMUSG00000078765.12	ENSMUST00000043273.16	884	8	6	1	1	0	multi-exon	FALSE	canonical	3	411	junction_1	81.3154602866678	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTGGTTTCCTTCCAC	NA	False	NA	35	True	AATAAA	-23	NA	30262751	30264789	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152336	chr7	-	8490	37	FSM	ENSMUSG00000006307.17	ENSMUST00000006470.14	8469	37	-21	0	-12	0	multi-exon	FALSE	canonical	3	32	junction_36	36.953257094288	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGGTCTTTCCGTGCCT	NA	False	NA	-23	True	AATAAA	-18	NA	30288163	30268282	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30270264_30273384_30273492_30273572_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30276881_30277907_30278046_30278127_30278220_30278304_30278421_30278931_30279006_30279145_30279251_30279350_30279441_30279514_30279700_30279863_30279978_30280439_30280558_30281074_30281171_30281262_30281410_30281592_30281707_30281832_30281932_30282212_30282308_30282608_30282888_30283124_30283181_30283341_30283622_30283873_30284025_30284117_30284232_30284418_30286455_30286679_30286753_30287779
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152341	chr7	-	1874	6	NIC	ENSMUSG00000006310.11	novel	1775	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_4	21.6277599394852	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAGTCCAGACTTTTCC	NA	False	NA	0	True	AATAAA	-20	NA	30298334	30289105	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_30289633_30289780_30289946_30290057_30290127_30290220_30290295_30290481_30291391_30298204
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152351	chr7	-	527	4	FSM	ENSMUSG00000036751.8	ENSMUST00000075738.6	618	4	-19	110	-19	3	multi-exon	FALSE	canonical	3	5624	junction_1	329.368419183679	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTGTGTATTACACAGC	NA	False	NA	-1	True	AATAAA	-21	NA	30325595	30316395	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_30316588_30322839_30322941_30323924_30324039_30325475
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152357	chr7	-	190	1	NIC	ENSMUSG00000036751.8	novel	618	4	NA	NA	6320	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATTGTGTGTATTACAC	6454	False	NA	-4	True	AATAAA	-18	NA	30316588	30316398	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_30316400_30316600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152364	chr7	-	1563	9	FSM	ENSMUSG00000036733.17	ENSMUST00000108141.2	1526	9	-32	-5	-32	5	multi-exon	TRUE	canonical	3	345	junction_5	209.790818435889	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGACTTAGAAACTGTTGG	3752	False	NA	-7	True	AATAAA	-23	NA	30349601	30340418	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345247_30346984_30347060_30347155_30347241_30349008_30349145_30349362
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152365	chr7	-	1651	10	FSM	ENSMUSG00000036733.17	ENSMUST00000042726.14	1784	10	140	-7	-33	5	multi-exon	FALSE	canonical	3	640	junction_5	133.345925331332	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGACTTAGAAACTGTTGG	3751	False	NA	-7	True	AATAAA	-23	NA	30349602	30340418	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345268_30345343_30345410_30346984_30347060_30347155_30347241_30349008_30349145_30349362
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152386	chr7	-	2195	19	FSM	ENSMUSG00000078762.11	ENSMUST00000019697.9	2187	19	0	-8	0	3	multi-exon	FALSE	canonical	3	112	junction_13	34.9573373142001	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCAGTTTTATCAACTT	NA	False	NA	-1	True	AATAAA	-18	NA	30364419	30353132	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152398	chr7	-	879	7	FSM	ENSMUSG00000006315.10	ENSMUST00000006478.10	870	7	-5	-4	-5	0	multi-exon	FALSE	canonical	3	739	junction_6	21.1850314032233	186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTATGTCCATCTCTCT	9252	False	NA	-12	True	AGTAAA	-18	NA	30428970	30427125	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_30427329_30427411_30427534_30427629_30427715_30427856_30427994_30428081_30428142_30428626_30428697_30428768
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152407	chr7	+	458	6	FSM	ENSMUSG00000074199.8	ENSMUST00000098559.3	470	6	0	12	0	0	multi-exon	FALSE	canonical	3	54	junction_5	10.9105453575887	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTCCTGAATCTGTGTT	NA	False	NA	11	True	AATAAA	-16	NA	30487329	30490510	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_30487448_30488929_30488969_30489137_30489180_30489336_30489382_30489992_30490041_30490344
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152413	chr7	-	1657	2	FSM	ENSMUSG00000019429.8	ENSMUST00000094583.2	1625	2	-21	-11	-21	11	multi-exon	FALSE	canonical	3	35	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTTTCCTTATCTCCTT	7645	False	NA	NA	False	AATAAA	-24	NA	30555624	30553743	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_30555330_30555553
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152427	chr7	-	1917	10	FSM	ENSMUSG00000001247.17	ENSMUST00000205961.2	2021	10	108	-4	108	0	multi-exon	TRUE	canonical	3	74	junction_7	47.1029867208513	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAAGCCTCTTGTTTTGCT	NA	False	NA	-3	True	AATAAA	-17	NA	30672639	30657199	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_30657327_30657413_30658046_30658174_30658307_30658399_30658460_30658577_30658740_30661522_30661670_30662235_30662293_30665393_30665514_30671292_30671638_30672504
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152432	chr7	-	2076	9	FSM	ENSMUSG00000001247.17	ENSMUST00000108116.10	2071	9	-3	-2	-3	0	multi-exon	FALSE	canonical	3	93	junction_6	34.291945118351	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAAGCCTCTTGTTTTGCT	NA	False	NA	-3	True	AATAAA	-17	NA	30672855	30657199	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_30657327_30657413_30658046_30658174_30658307_30658399_30658460_30658577_30658740_30661522_30661670_30665393_30665514_30671292_30671638_30672504
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152452	chr7	-	3868	18	FSM	ENSMUSG00000001248.16	ENSMUST00000185985.7	3722	18	-146	0	-76	0	multi-exon	FALSE	canonical	3	189	junction_17	34.4459860006517	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5610	False	NA	-1	True	AATAAA	-15	NA	30850583	30829551	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30850320
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152463	chr7	-	2898	20	NIC	ENSMUSG00000001248.16	novel	2713	19	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_19	77.4223227918279	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	841	False	NA	-1	True	AATAAA	-15	NA	30855352	30829551	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30854291_30854572_30855260
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152505	chr7	-	227	1	Intergenic	novelGene_4715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGGCTGGAAAGGTGGC	NA	False	NA	NA	False	TTTAAA	-9	NA	33854990	33854763	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_33854800_33855000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152511	chr7	+	206	1	Intergenic	novelGene_4716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1272	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTCCCACCAACAGTTA	NA	False	NA	NA	False	AAAACA	-2	NA	33859259	33859465	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_33859300_33859500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152520	chr7	+	217	1	Antisense	novelGene_ENSMUSG00000052997.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	478	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTCATAGCAAACAGCAT	NA	False	NA	NA	False	NA	NA	NA	33863550	33863767	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr7_+_33863600_33863800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152531	chr7	-	211	1	Intergenic	novelGene_4717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTATATGAGTACACTG	NA	False	NA	NA	False	NA	NA	NA	33882540	33882329	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_33882300_33882500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152537	chr7	-	1174	7	FSM	ENSMUSG00000002635.12	ENSMUST00000002710.10	1295	7	-9	130	-9	4	multi-exon	FALSE	canonical	3	638	junction_2	61.3994209165599	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTTTACCTTATTTTA	5723	False	NA	NA	False	ATTAAA	-24	NA	33896095	33884053	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_33884237_33885718_33885868_33888773_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152551	chr7	-	224	1	Intergenic	novelGene_4718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTAATTATTAAATATGGAA	NA	False	NA	NA	False	NA	NA	NA	33885535	33885311	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_33885300_33885500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152572	chr7	+	189	1	FSM	ENSMUSG00000085105.3	ENSMUST00000205940.2	1112	1	923	0	923	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGCAGTGGTGGCGCAC	NA	False	NA	NA	False	NA	NA	NA	33934788	33934977	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_33934800_33935000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152594	chr7	+	197	1	Intergenic	novelGene_4719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGGTTGTCTGAGTCTCT	NA	False	NA	NA	False	NA	NA	NA	34014288	34014485	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_34014300_34014500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152597	chr7	-	2974	11	FSM	ENSMUSG00000066568.13	ENSMUST00000085585.12	2944	11	-21	-9	-21	9	multi-exon	FALSE	canonical	3	572	junction_4	54.3963234051714	278	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTGGTTTTTGTTAAC	NA	False	NA	-2	True	AATAAA	-42	NA	34089133	34044061	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_34045384_34047350_34047408_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152610	chr7	+	197	1	Intergenic	novelGene_4720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	249	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTATTTATTTCACCTAT	NA	False	NA	NA	False	NA	NA	NA	34055958	34056155	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_34056000_34056200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152619	chr7	-	186	1	Intergenic	novelGene_4721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAGTGATTGGGAGGCT	NA	False	NA	NA	False	NA	NA	NA	34066781	34066595	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_34066600_34066800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152630	chr7	+	169	1	Intergenic	novelGene_4722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAGTAATAAATCTTA	724	False	NA	NA	False	NA	NA	NA	34389361	34389530	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_34389400_34389500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152638	chr7	+	172	1	Intergenic	novelGene_4723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTAAAGCAGGA	NA	False	NA	NA	False	NA	NA	NA	34534810	34534982	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_34534800_34535000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152646	chr7	+	1855	15	FSM	ENSMUSG00000063931.15	ENSMUST00000075068.14	1881	15	28	-2	28	2	multi-exon	FALSE	canonical	3	282	junction_1	31.3925930429327	348	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCCCATCTTCCTCTT	NA	False	NA	16	True	AATAAA	-21	NA	34611831	34744135	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_34611880_34620753_34620938_34623805_34623934_34634106_34634171_34642063_34642112_34645011_34645074_34653982_34654028_34668929_34669006_34671081_34671129_34720389_34720459_34721117_34721196_34730767_34730917_34740095_34740281_34743114_34743307_34743655
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152670	chr7	-	196	1	Intergenic	novelGene_4724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGAGGGAGGGGAAGAGA	114	False	NA	NA	False	NA	NA	NA	34952875	34952679	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_34952700_34952900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152682	chr7	+	180	1	Intergenic	novelGene_4725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATTATATTTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	34968385	34968565	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_34968400_34968600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152687	chr7	-	3066	20	FSM	ENSMUSG00000063808.15	ENSMUST00000079693.12	3065	20	-1	0	-1	0	multi-exon	FALSE	canonical	3	140	junction_17	13.3084023611853	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTCTTGATTTCTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	35017866	34975960	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_34976237_34980756_34980906_34982995_34983094_34984140_34984249_34986547_34986762_34987941_34988106_34988464_34988602_34991150_34991279_34993079_34993259_34994679_34994977_34996908_34997114_34998645_34998726_35001002_35001151_35002653_35002897_35005354_35005414_35006613_35006712_35007603_35007765_35008725_35008812_35009864_35010000_35017765
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152704	chr7	+	3362	15	FSM	ENSMUSG00000030494.14	ENSMUST00000032705.13	3508	15	144	2	-16	-2	multi-exon	FALSE	canonical	3	83	junction_1	11.3992928531124	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTTTTTTCTTTTGCT	NA	False	NA	24	True	AATAAA	-24	NA	35033738	35091712	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_35033837_35053156_35053273_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35084908_35090179
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152723	chr7	-	1704	4	FSM	ENSMUSG00000030493.14	ENSMUST00000032704.12	1857	4	27	126	27	27	multi-exon	TRUE	canonical	3	143	junction_2	4.92160768674447	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGAACATGACTTTATTT	NA	False	NA	NA	False	AATAAA	-31	NA	35096234	35091702	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_35092517_35094399_35094553_35094661_35094802_35095637
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152729	chr7	+	2606	19	FSM	ENSMUSG00000023072.15	ENSMUST00000079414.12	2610	19	4	0	4	0	multi-exon	FALSE	canonical	2	65	junction_12	24.7032386540712	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCATGTTTATTTCAG	NA	False	NA	10	True	AATAAA	-20	NA	35096483	35138114	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35131942_35132033_35134898_35135069_35137752
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152730	chr7	+	2529	17	NNC	ENSMUSG00000023072.15	novel	2825	20	NA	NA	4	-2116	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	44.1628732647685	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTGTACTCAGTGTC	NA	False	NA	16	True	AATAAA	-22	NA	35096483	35129883	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122833_35124084_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35129339
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152746	chr7	+	2599	19	NNC	ENSMUSG00000023072.15	novel	2825	20	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	36.9808091706169	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGCATGTTTATTTC	NA	False	NA	8	True	AATAAA	-18	NA	35096489	35138112	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122833_35124084_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35131942_35132033_35134898_35135069_35137752
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152760	chr7	-	174	1	Intergenic	novelGene_4726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAGGAATGAA	NA	False	NA	NA	False	NA	NA	NA	35098397	35098223	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_35098200_35098400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152773	chr7	-	1586	12	FSM	ENSMUSG00000030491.17	ENSMUST00000032701.14	1620	12	26	8	26	-8	multi-exon	FALSE	canonical	3	378	junction_6	48.0311538018523	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGCTTCTAAAATTCTC	NA	False	NA	-21	True	AATAAA	-25	NA	35237144	35193044	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152806	chr7	+	4233	28	NIC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_20	54.7169546878799	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGTGCCATTTTTGTG	NA	False	NA	23	True	AGTAAA	-15	NA	35285674	35338651	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152835	chr7	-	4284	19	FSM	ENSMUSG00000043671.15	ENSMUST00000051377.15	8006	19	53	3669	-2	1891	multi-exon	FALSE	canonical	3	11	junction_12	3.52591814502721	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAATAGTTGATTAAAAT	NA	False	NA	NA	False	AATAAA	-20	NA	35453826	35388258	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_35390368_35392201_35392361_35394706_35394840_35402913_35402997_35406805_35406863_35407484_35407597_35407959_35408083_35411285_35411445_35411569_35411644_35413550_35413653_35416011_35416144_35420969_35421105_35422131_35422256_35424715_35424862_35426714_35426837_35429110_35429202_35449164_35449299_35452039_35452182_35453679
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152839	chr7	-	6701	7	FSM	ENSMUSG00000044452.11	ENSMUST00000061586.11	6693	7	-10	2	4	-2	multi-exon	FALSE	canonical	3	57	junction_5	5.55777733351102	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTTTCTAAGTTTCCT	NA	False	NA	NA	False	AATAAA	-19	NA	35502424	35471769	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_35475753_35475862_35475998_35487142_35487258_35491072_35491188_35492947_35495044_35500862_35500954_35502258
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152847	chr7	+	647	1	FSM	ENSMUSG00000066543.9	ENSMUST00000119541.2	555	1	-36	-56	-36	56	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTCAAGAGCCCTGGT	NA	False	NA	NA	False	AATAAA	-40	NA	35817662	35818309	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_35817700_35818300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152855	chr7	+	179	1	Intergenic	novelGene_4727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAGAGAGAGAAT	NA	False	NA	NA	False	NA	NA	NA	36290792	36290971	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_36290800_36291000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152864	chr7	-	3311	11	NIC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	265.936383370159	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGCCTGCTTTATCTA	NA	False	NA	-5	True	ATTAAA	-24	NA	37718931	37659416	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_37661029_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152869	chr7	-	3423	10	NIC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	7	0	intron_retention	FALSE	canonical	3	145	junction_9	251.968251968378	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGCCTGCTTTATCTA	NA	False	NA	-5	True	ATTAAA	-24	NA	37718984	37659416	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37718534
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152892	chr7	-	2067	12	FSM	ENSMUSG00000002068.17	ENSMUST00000108023.10	2000	12	-62	-5	-62	5	multi-exon	FALSE	canonical	2	563	junction_4	98.4049652714874	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTAACTCTGTCTAGT	NA	False	NA	-7	True	AATAAA	-24	NA	37807021	37797403	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37799028_37799213_37799310_37799979_37800127_37802210_37802347_37802470_37802620_37805703_37805773_37806020_37806109_37806211_37806255_37806746
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152902	chr7	-	1874	11	NIC	ENSMUSG00000002068.17	novel	2000	12	NA	NA	25	0	combination_of_known_splicesites	FALSE	canonical	2	124	junction_8	222.463053112197	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGTTCTTAACTCTGT	NA	False	NA	-12	True	AATAAA	-19	NA	37806902	37797408	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37799028_37799213_37799310_37799979_37800127_37802210_37802347_37802470_37802620_37806020_37806109_37806211_37806255_37806746
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152907	chr7	-	185	1	Intergenic	novelGene_4728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTTCAAGGCCACATAACA	NA	False	NA	NA	False	NA	NA	NA	37834817	37834632	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_37834600_37834800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152926	chr7	-	1541	2	FSM	ENSMUSG00000074170.6	ENSMUST00000098513.6	5263	2	21	3701	21	-3701	multi-exon	FALSE	canonical	3	140	junction_1	0	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTTGATTGTTAAGAGT	NA	False	NA	-20	True	NA	NA	NA	37927419	37920096	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_37921583_37927364
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152936	chr7	-	1244	7	FSM	ENSMUSG00000030423.8	ENSMUST00000032585.8	2113	7	41	828	-9	-828	multi-exon	FALSE	canonical	3	243	junction_2	18.1567251085284	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATAAATGGCTTCAAAT	NA	False	NA	-13	True	AATAAA	-11	NA	37970806	37962247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_37962734_37963751_37963854_37965323_37965386_37965550_37965629_37966792_37967020_37968325_37968379_37970570
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152946	chr7	-	203	1	Intergenic	novelGene_4729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCAATTCCCATGAAGG	NA	False	NA	NA	False	NA	NA	NA	39196158	39195955	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_39196000_39196200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152951	chr7	+	5219	6	FSM	ENSMUSG00000108621.2	ENSMUST00000188038.3	16021	6	-22	10824	-21	4555	multi-exon	FALSE	canonical	3	26	junction_1	12.1819538662728	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGGAGGTTCTGTTTTC	NA	False	NA	19	True	AATAAA	-22	NA	39201902	39219189	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_39202036_39202651_39202757_39213125_39213253_39213425_39213487_39214290_39214506_39214611
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152960	chr7	+	187	1	Intergenic	novelGene_4730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTTGAATAAGTCTGAT	NA	False	NA	NA	False	NA	NA	NA	39248909	39249096	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_39248900_39249100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152967	chr7	-	184	1	Intergenic	novelGene_4731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAAAAGAGGCAAA	NA	False	NA	NA	False	NA	NA	NA	39385432	39385248	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_39385200_39385400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152974	chr7	+	456	1	FSM	ENSMUSG00000056836.9	ENSMUST00000154478.3	395	1	-33	-28	-33	28	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTTCTTATAGTGCTAAA	NA	False	NA	NA	False	AATAAA	-29	NA	39840327	39840783	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_39840300_39840800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152980	chr7	-	2909	5	Fusion	ENSMUSG00000056383.11_ENSMUSG00000074166.8	novel	2071	5	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_4	34.3329288002058	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTTTTTCTGACTTTT	NA	False	NA	-14	True	AATAAA	-25	NA	41148841	41022346	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr7_-_41024799_41025914_41025973_41026169_41026297_41037531_41037680_41148717
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152981	chr7	-	2761	4	FSM	ENSMUSG00000056383.11	ENSMUST00000071804.10	2671	4	-90	0	29	0	multi-exon	FALSE	canonical	3	26	junction_3	27.3901847788988	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTTTTTCTGACTTTT	NA	False	NA	-14	True	AATAAA	-25	NA	41042774	41022346	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_41024799_41025914_41025973_41026169_41026297_41042650
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152982	chr7	-	2909	5	FSM	ENSMUSG00000056383.11	ENSMUST00000205338.2	2071	5	29	-867	29	0	multi-exon	FALSE	canonical	3	47	junction_4	16.2845785944863	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTTTTTCTGACTTTT	NA	False	NA	-14	True	AATAAA	-25	NA	41042774	41022346	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_41024799_41025914_41025973_41026169_41026297_41037531_41037680_41042650
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000152996	chr7	-	2932	4	FSM	ENSMUSG00000074166.8	ENSMUST00000098509.5	3411	4	482	-3	0	3	multi-exon	FALSE	canonical	3	38	junction_1	6.97614984548545	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTTTTTTCTGTCTTT	NA	False	NA	3	True	AATAAA	-24	NA	41148832	41128294	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_41130924_41131989_41132051_41132256_41132384_41148717
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153001	chr7	+	234	1	Intergenic	novelGene_4732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGTAAGAATGCACATAGC	NA	False	NA	NA	False	AAAAAG	-14	NA	41150701	41150935	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_41150700_41150900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153014	chr7	-	2883	4	NNC	ENSMUSG00000090744.8	novel	1430	4	NA	NA	5	1394	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	104.951840807529	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTTTCTTTTTTTTTTAA	NA	False	NA	-1	True	NA	NA	NA	41210248	41193703	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_-_41196224_41197139_41197201_41197407_41197535_41210073
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153015	chr7	-	2851	4	FSM	ENSMUSG00000090744.8	ENSMUST00000073410.12	1430	4	-27	-1394	-27	1394	multi-exon	FALSE	canonical	3	131	junction_3	48.9285192909003	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTTTCTTTTTTTTTTAA	NA	False	NA	-1	True	NA	NA	NA	41210280	41193703	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_41196224_41197139_41197201_41197407_41197535_41210137
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153027	chr7	+	4015	6	FSM	ENSMUSG00000091474.3	ENSMUST00000163475.3	4004	6	-11	0	-11	0	multi-exon	FALSE	canonical	3	115	junction_1	46.5403051128804	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGGGTAATGAATTTCT	NA	False	NA	45	True	AATAAA	-27	NA	41248673	41277957	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_41248825_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153043	chr7	+	285	1	Intergenic	novelGene_4733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGGAAAACACATCCAAACA	NA	False	NA	NA	False	NA	NA	NA	41597663	41597948	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_41597700_41597900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153052	chr7	+	207	1	Intergenic	novelGene_4734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTCTAATGGATGGACA	NA	False	NA	NA	False	TTTAAA	-5	NA	41702239	41702446	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_41702200_41702400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153066	chr7	-	4062	7	FSM	ENSMUSG00000092416.3	ENSMUST00000174407.3	4069	7	13	-6	12	6	multi-exon	FALSE	canonical	3	140	junction_4	65.4285021140549	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGCTGTCTTGGGATA	NA	False	NA	-9	True	AATAAA	-21	NA	42155137	42122803	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139432_42139701_42150781_42150850_42155033
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153083	chr7	-	3954	8	NNC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	112.633050574122	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTACTTACTGCTGTCTT	NA	False	NA	-15	True	AATAAA	-15	NA	42155137	42122809	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_-_42123626_42123697_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139462_42139701_42150781_42150850_42155033
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153084	chr7	-	3888	7	NNC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	123.187751916423	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTACTTACTGCTGTCTT	NA	False	NA	-15	True	AATAAA	-15	NA	42155139	42122809	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_-_42123626_42123697_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139462_42139701_42155033
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153093	chr7	-	4035	6	NIC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	125	junction_5	88.2813683627525	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTACTTACTGCTGTCTT	NA	False	NA	-15	True	AATAAA	-15	NA	42155184	42122809	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139432_42139701_42155033
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153105	chr7	+	189	1	Intergenic	novelGene_4735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGTAGAAATCTGCACT	NA	False	NA	NA	False	NA	NA	NA	42141159	42141348	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_42141200_42141300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153129	chr7	-	5009	4	FSM	ENSMUSG00000074158.10	ENSMUST00000098503.9	1976	4	-43	-2990	-2	12	multi-exon	FALSE	canonical	3	68	junction_3	11.7284080571728	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTCTGAGAATTCTGAG	NA	False	NA	-11	True	NA	NA	NA	42292014	42258937	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_42263648_42265396_42265458_42265656_42265784_42291903
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153167	chr7	-	4339	4	NNC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	-3	4	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_1	72.2787812723916	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATTAGTAATTTGTTT	NA	False	NA	-10	True	AATAAA	-18	NA	42516661	42466248	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_-_42470287_42471782_42471844_42472041_42472168_42516547
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153177	chr7	+	206	1	Intergenic	novelGene_4736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAAAGTCTAGAAGTGGA	NA	False	NA	NA	False	NA	NA	NA	42597900	42598106	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_42597900_42598100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153182	chr7	+	5675	4	Fusion	ENSMUSG00000071952.4_ENSMUSG00000107181.2	novel	378	4	NA	NA	-22	2820	multi-exon	FALSE	canonical	3	100	junction_3	9.20144916122817	44	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGGTTCTTCTATTGC	NA	False	NA	10	True	NA	NA	NA	42727452	42752087	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr7_+_42727598_42741712_42741840_42742038_42742100_42746745
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153222	chr7	+	1880	4	FSM	ENSMUSG00000074887.5	ENSMUST00000206405.2	1428	4	-5	-447	-5	447	multi-exon	FALSE	canonical	3	215	junction_3	24.5356882927706	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGGGACACTCTTTGTA	9993	False	NA	12	True	AATAAA	-14	NA	42863457	42876713	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_42863572_42872998_42873126_42873324_42873386_42875135
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153230	chr7	+	2784	5	Intergenic	novelGene_4737	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	78	junction_1	56.6629287982893	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTCAGTATTGACATTTT	NA	False	NA	NA	False	NA	NA	NA	42903168	42915069	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_42903292_42906867_42906982_42910109_42910237_42910431_42910493_42912710
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153232	chr7	+	2670	4	Intergenic	novelGene_4738	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	80.425258608364	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTCAGTATTGACATTTT	NA	False	NA	NA	False	NA	NA	NA	42903168	42915069	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_42903292_42910109_42910237_42910431_42910493_42912710
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153244	chr7	-	180	1	Intergenic	novelGene_4739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTGAGACAAGATCTC	NA	False	NA	5	True	NA	NA	NA	42933764	42933584	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_42933600_42933800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153251	chr7	-	4202	5	FSM	ENSMUSG00000012640.17	ENSMUST00000107986.9	4184	5	-17	-1	-9	1	multi-exon	FALSE	canonical	3	60	junction_4	14.2894191624432	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTTCATATTGCTTTT	NA	False	NA	1	True	AATAAA	-17	NA	42962696	42945945	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_42949601_42950593_42950690_42951034_42951162_42960454_42960610_42962527
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153257	chr7	-	4150	5	NNC	ENSMUSG00000012640.17	novel	4363	6	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	37.0607609204128	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTGTTCATATTGCTTT	NA	False	NA	0	True	AATAAA	-16	NA	42962521	42945946	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_-_42949601_42950593_42950690_42951034_42951162_42960454_42960675_42962468
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153259	chr7	-	4266	5	NIC	ENSMUSG00000012640.17	novel	4363	6	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	30.589009464185	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTGTTCATATTGCTTT	NA	False	NA	0	True	AATAAA	-16	NA	42962696	42945946	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_42949601_42950593_42950690_42951034_42951162_42960454_42960675_42962527
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153273	chr7	-	184	1	Intergenic	novelGene_4740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTCAAAAGAAGGAATGAGA	NA	False	NA	NA	False	NA	NA	NA	42992364	42992180	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_42992200_42992400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153279	chr7	+	879	6	FSM	ENSMUSG00000004610.5	ENSMUST00000004729.5	893	6	0	14	0	3	multi-exon	FALSE	canonical	3	1745	junction_1	117.194539121923	331	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTTCCTCATTCTTT	1908	False	NA	38	True	AATAAA	-21	NA	43093506	43107210	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_43093629_43101764_43101924_43102222_43102382_43103941_43104005_43105902_43106062_43106993
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153299	chr7	+	230	1	Intergenic	novelGene_4741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGCACTGGGCA	NA	False	NA	NA	False	NA	NA	NA	43205848	43206078	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_43205800_43206100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153303	chr7	+	3155	3	ISM	ENSMUSG00000030469.11	ENSMUST00000058104.8	4494	4	4456	1184	4427	-1184	3prime_fragment	FALSE	canonical	3	28	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTGGCTGGATAGTAATA	NA	False	NA	3	True	NA	NA	NA	43233489	43241475	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr7_+_43233721_43235777_43235905_43238678
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153321	chr7	-	182	1	Intergenic	novelGene_4742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAAATCTGTGTTA	1067	False	NA	NA	False	NA	NA	NA	43312192	43312010	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_43312000_43312200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153330	chr7	+	2479	3	FSM	ENSMUSG00000038888.9	ENSMUST00000038332.9	2475	3	-1	-3	-1	3	multi-exon	FALSE	canonical	3	64	junction_1	1	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGGTCTGGTGTTTTA	NA	False	NA	11	True	NA	NA	NA	43321438	43327725	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_43321500_43324527_43325071_43325850
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153336	chr7	+	1341	6	FSM	ENSMUSG00000030693.11	ENSMUST00000014058.11	1373	6	32	0	32	0	multi-exon	FALSE	canonical	2	31	junction_4	14.5134420452214	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCAATGTGTGTGCCTCT	387	False	NA	9	True	ATTAAA	-16	NA	43430490	43434834	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_43430571_43430922_43431050_43432159_43432344_43432880_43433156_43433739_43433874_43434293
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153347	chr7	-	184	1	Intergenic	novelGene_4743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAGAAATTTCATAAATTC	NA	False	NA	NA	False	NA	NA	NA	43696033	43695849	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_43695800_43696000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153354	chr7	+	3352	5	FSM	ENSMUSG00000045411.17	ENSMUST00000107950.9	3336	5	-9	-7	-7	0	multi-exon	FALSE	canonical	3	709	junction_3	44.6933999601731	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896203	43901743	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153364	chr7	+	2066	7	FSM	ENSMUSG00000045411.17	ENSMUST00000185481.7	759	7	31	-1338	-2	0	multi-exon	FALSE	canonical	3	30	junction_1	300.418411922808	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896208	43901739	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_43896233_43896674_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153367	chr7	+	1902	6	FSM	ENSMUSG00000045411.17	ENSMUST00000137702.8	784	6	57	-1175	-2	0	multi-exon	FALSE	canonical	3	108	junction_1	258.311904487579	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTGTGCTGTTTGATTC	NA	False	NA	22	True	ATTAAA	-22	NA	43896208	43901741	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_43896233_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153375	chr7	+	2246	8	NIC	ENSMUSG00000045411.17	novel	988	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	327.388554024301	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTGTGCTGTTTGATTC	NA	False	NA	22	True	ATTAAA	-22	NA	43896208	43901741	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_43896248_43896661_43896841_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153376	chr7	+	1919	6	FSM	ENSMUSG00000045411.17	ENSMUST00000055858.14	1982	6	63	0	-2	0	multi-exon	FALSE	canonical	3	217	junction_1	215.342889364845	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896208	43901743	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_43896248_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153377	chr7	+	2083	7	NIC	ENSMUSG00000045411.17	novel	988	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	293.703743402921	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTGTGCTGTTTGATTC	NA	False	NA	22	True	ATTAAA	-22	NA	43896208	43901741	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_43896248_43896674_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153383	chr7	+	2098	7	FSM	ENSMUSG00000045411.17	ENSMUST00000084937.11	2092	7	-2	-4	-2	0	multi-exon	FALSE	canonical	3	105	junction_1	279.849612391291	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896208	43901743	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_43896248_43896661_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153386	chr7	+	2231	8	FSM	ENSMUSG00000045411.17	ENSMUST00000146155.8	988	8	-2	-1241	-2	0	multi-exon	FALSE	canonical	0	0	junction_3	335.825391948779	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896208	43901739	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_43896248_43896674_43896841_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153430	chr7	+	2048	7	FSM	ENSMUSG00000045411.17	ENSMUST00000187524.7	676	7	-12	-1360	0	0	multi-exon	FALSE	canonical	0	0	junction_2	348.685826433418	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_43896233_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153435	chr7	+	2227	8	NIC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	337.565594532744	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_43896233_43896661_43896841_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153437	chr7	+	2077	7	FSM	ENSMUSG00000045411.17	ENSMUST00000188111.7	2131	7	52	2	0	0	multi-exon	FALSE	canonical	3	44	junction_1	296.487211641019	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_43896233_43896661_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153441	chr7	+	1986	6	NNC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_2	324.315032029044	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_+_43896233_43897675_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153463	chr7	+	2001	6	NNC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_2	300.883100223326	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_+_43896248_43897675_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153480	chr7	+	3151	6	NIC	ENSMUSG00000045411.17	novel	988	8	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	301.065707113912	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTGTGCTGTTTGATTC	NA	False	NA	22	True	ATTAAA	-22	NA	43896210	43901741	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153483	chr7	+	3615	4	FSM	ENSMUSG00000045411.17	ENSMUST00000107949.8	3610	4	0	-5	0	0	multi-exon	FALSE	canonical	3	709	junction_3	48.6095555306659	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTGTGCTGTTTGATTC	NA	False	NA	22	True	ATTAAA	-22	NA	43896210	43901741	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_43897720_43898965_43899024_43899444_43899484_43899732
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153491	chr7	+	4587	4	NIC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	709	junction_2	50.8745734352852	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_43899024_43899444_43899484_43899732_43899765_43900036
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153495	chr7	+	5280	2	ISM	ENSMUSG00000080352.3_ENSMUSG00000045411.17	ENSMUST00000186606.2	748	3	-3178	-684	0	0	intron_retention	FALSE	canonical	3	709	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr7_+_43899484_43899732
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153545	chr7	+	1899	1	Intergenic	novelGene_4744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTACTTTGTGGCTACT	2	True	NA	NA	False	NA	NA	NA	44137278	44139177	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_44137300_44139200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153554	chr7	-	1724	8	FSM	ENSMUSG00000008140.19	ENSMUST00000118515.9	1662	8	-62	0	-5	0	multi-exon	FALSE	canonical	3	258	junction_1	346.110162950988	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTGCCTTCTGTGCTTG	NA	False	NA	-1	True	ATTAAA	-31	NA	44145892	44139534	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_44140395_44140586_44140674_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153572	chr7	-	1894	7	NIC	ENSMUSG00000008140.19	novel	1662	8	NA	NA	5	-12	intron_retention	FALSE	canonical	3	278	junction_1	282.765509447905	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAGCTCACTTCCTGC	NA	False	NA	-13	True	ATTAAA	-19	NA	44145882	44139546	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_44140674_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153596	chr7	-	3490	26	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	39	0	intron_retention	FALSE	canonical	3	875	junction_25	149.475648852915	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGTGTGTTGTGGTCT	NA	False	NA	-5	True	AATAAA	-18	NA	44198223	44182172	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153619	chr7	-	2267	9	FSM	ENSMUSG00000060601.14	ENSMUST00000123358.9	1853	9	-45	-369	-5	0	multi-exon	FALSE	canonical	0	0	junction_8	201.405336014218	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGAGCCCAGTGTGGAG	NA	False	NA	0	True	AATAAA	-31	NA	44203380	44199039	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44202045_44202120_44202179_44203002_44203133_44203232
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153627	chr7	-	1989	10	FSM	ENSMUSG00000060601.14	ENSMUST00000107910.8	1948	10	-22	-19	3	0	multi-exon	TRUE	canonical	0	0	junction_9	233.829683717988	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGAGCCCAGTGTGGAG	NA	False	NA	0	True	AATAAA	-31	NA	44203369	44199039	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201661_44201930_44202045_44202120_44202182_44203002_44203133_44203232
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153633	chr7	-	2000	10	NIC	ENSMUSG00000060601.14	novel	1999	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	224.012290227209	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGAGCCCAGTGTGGAG	NA	False	NA	0	True	AATAAA	-31	NA	44203371	44199039	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201670_44201930_44202045_44202120_44202182_44203002_44203133_44203232
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153636	chr7	-	2000	10	FSM	ENSMUSG00000060601.14	ENSMUST00000073488.12	1999	10	-1	0	-1	0	multi-exon	FALSE	canonical	0	0	junction_9	207.457626195488	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGAGCCCAGTGTGGAG	NA	False	NA	0	True	AATAAA	-31	NA	44203374	44199039	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201670_44201930_44202045_44202120_44202179_44203002_44203133_44203232
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153676	chr7	-	195	1	Intergenic	novelGene_4745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGACATGGTGTTTTCCAT	NA	False	NA	NA	False	NA	NA	NA	44216788	44216593	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_44216600_44216800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153684	chr7	+	178	1	Intergenic	novelGene_4746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGAAAAAGTCTCTG	384	False	NA	NA	False	NA	NA	NA	44218943	44219121	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_44218900_44219100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153702	chr7	-	193	1	Intergenic	novelGene_4747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTATTTATTTTGTGGC	NA	False	NA	NA	False	TTTAAA	-1	NA	44337786	44337593	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_44337600_44337800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153707	chr7	+	190	1	Intergenic	novelGene_4748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAGTTCAAGGCCAGC	NA	False	NA	NA	False	NA	NA	NA	44369809	44369999	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_44369800_44370000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153738	chr7	+	1757	15	FSM	ENSMUSG00000002205.17	ENSMUST00000002275.15	1969	15	212	0	-11	0	multi-exon	FALSE	canonical	3	94	junction_1	19.1081775420785	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGAGAGTTCAGTGTTC	NA	False	NA	16	True	AATAAA	-16	NA	44398048	44426939	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_44398076_44401538_44401601_44403239_44403380_44407169_44407320_44409123_44409319_44410301_44410367_44412414_44412482_44413548_44413634_44414206_44414313_44416545_44416639_44417866_44418000_44418956_44419078_44420287_44420347_44424799_44424960_44426645
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153746	chr7	-	1756	3	FSM	ENSMUSG00000038539.16	ENSMUST00000047356.11	1816	3	59	1	-25	0	multi-exon	FALSE	canonical	3	52	junction_1	35.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTGTCTTATCTTTG	9745	False	NA	-1	True	AATAAA	-18	NA	44466023	44461680	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_44462945_44464412_44464707_44465825
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153749	chr7	+	3744	2	FSM	ENSMUSG00000109511.2	ENSMUST00000057195.17	2722	2	0	-1022	0	1022	multi-exon	FALSE	canonical	3	986	junction_1	0	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTTGTTCAGGATTGTA	75	False	NA	15	True	AATAAA	-17	NA	44465511	44481258	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_44465908_44477910
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153770	chr7	+	2191	1	ISM	ENSMUSG00000109511.2	ENSMUST00000208626.2	2708	2	12529	2	10180	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGACTTGCTGTGAGTATG	3	True	NA	16	True	AATAAA	-16	NA	44478040	44480231	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr7_+_44478000_44480200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153777	chr7	-	2191	17	FSM	ENSMUSG00000038520.16	ENSMUST00000047085.16	8750	17	160	6399	-4	10	multi-exon	FALSE	canonical	3	189	junction_4	26.4359485360371	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATCAGGACACTTTGCT	7863	False	NA	0	True	AATAAA	-25	NA	44498339	44490445	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_44490845_44490966_44491054_44491406_44491524_44491626_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153789	chr7	+	1585	5	FSM	ENSMUSG00000011096.18	ENSMUST00000054343.15	1592	5	4	3	4	1	multi-exon	FALSE	canonical	3	159	junction_1	63.711753232822	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCGTGTTGTGTGTGAGTG	1404	False	NA	16	True	ATTAAA	-21	NA	44498651	44504842	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_44498773_44501994_44502384_44503203_44503282_44503362_44503533_44504015
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153800	chr7	+	1485	5	FSM	ENSMUSG00000011096.18	ENSMUST00000107882.8	1160	5	357	-682	-21	1	multi-exon	FALSE	canonical	3	55	junction_1	107.27622057101	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCGTGTTGTGTGTGAGTG	2162	False	NA	16	True	ATTAAA	-21	NA	44499409	44504842	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_44499431_44501994_44502384_44503203_44503282_44503362_44503533_44504015
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153859	chr7	-	2334	18	NIC	ENSMUSG00000002968.10	novel	2619	18	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	175	junction_9	180.66160609536	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGCTCCCGTGACTGACG	6943	False	NA	-6	True	AATAAA	-17	NA	44541848	44528807	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_44528939_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533675_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153866	chr7	-	2332	18	FSM	ENSMUSG00000002968.10	ENSMUST00000003049.8	2619	18	287	0	-6	0	multi-exon	FALSE	canonical	3	744	junction_9	66.5493546850497	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGCTCCCGTGACTGACG	6942	False	NA	-6	True	AATAAA	-17	NA	44541849	44528807	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_44528939_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153882	chr7	-	2257	17	NIC	ENSMUSG00000002968.10	novel	2619	18	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	3	109	junction_3	203.468018064265	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCGGCTCCCGTGACTGA	6943	False	NA	-8	True	AATAAA	-15	NA	44541848	44528809	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_44528939_44529350_44529529_44529675_44529895_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153908	chr7	-	178	1	Intergenic	novelGene_4749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAGGAAAAAAAAAAGG	NA	False	NA	-13	True	NA	NA	NA	44585473	44585295	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_44585300_44585500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153915	chr7	-	2744	19	FSM	ENSMUSG00000007783.11	ENSMUST00000063761.8	2793	19	50	-1	-23	0	multi-exon	FALSE	canonical	3	39	junction_13	17.8819862459058	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACTGTGCTTTTCTGCGG	2714	False	NA	-1	True	AATAAA	-21	NA	44624225	44608795	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_44609100_44609267_44609361_44609473_44609588_44610181_44610335_44610942_44611075_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614691_44614794_44614991_44616049_44616135_44616220_44616329_44616481_44616557_44619828_44619967_44620041_44620144_44620659_44620832_44622433_44622574_44623150_44623305_44624018
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153922	chr7	+	183	1	Intergenic	novelGene_4750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGACCACTAAGGTCTGGC	NA	False	NA	NA	False	NA	NA	NA	44618662	44618845	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_44618700_44618800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153924	chr7	-	2077	10	FSM	ENSMUSG00000109324.3	ENSMUST00000207370.2	2147	10	71	-1	13	1	multi-exon	FALSE	canonical	3	3261	junction_9	152.269092540837	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCTGTTTGCGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	44635845	44625411	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44635706
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153936	chr7	-	1315	11	FSM	ENSMUSG00000109324.3	ENSMUST00000107843.11	1508	11	196	-3	-16	3	multi-exon	FALSE	canonical	3	222	junction_9	1333.46760365597	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCGCCCTGGGGCTGGG	NA	False	NA	-27	True	AATAAA	-20	NA	44635796	44626178	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44633503_44633558_44635706
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153947	chr7	-	1579	11	NIC	ENSMUSG00000109324.3	novel	1508	11	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	165	junction_9	1344.93463038171	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCACTTCTCGCCCTGGGG	NA	False	NA	-32	True	AATAAA	-15	NA	44635756	44626183	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44633194_44633558_44635706
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153958	chr7	+	1583	8	FSM	ENSMUSG00000003184.16	ENSMUST00000003284.16	2031	8	-8	456	-8	2	multi-exon	TRUE	canonical	3	81	junction_5	29.0601066054199	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGTCGACTGCGTCTA	NA	False	NA	7	True	AATAAA	-22	NA	44647063	44651816	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_44647333_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44649971_44650068_44650447_44651096_44651213_44651587
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153966	chr7	+	1647	7	FSM	ENSMUSG00000003184.16	ENSMUST00000207555.2	1641	7	-17	11	6	0	multi-exon	FALSE	canonical	3	134	junction_1	17.7458915433028	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTGTCGACTGCGTC	NA	False	NA	5	True	AATAAA	-20	NA	44647095	44651814	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_44647333_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44650447_44651096_44651213_44651587
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153972	chr7	-	4052	11	FSM	ENSMUSG00000038406.18	ENSMUST00000085383.11	4293	11	245	-4	13	4	multi-exon	FALSE	canonical	3	86	junction_10	46.9408137978029	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTAGTGGTGTACCCTTG	5299	False	NA	-2	True	ATTAAA	-21	NA	44665542	44652367	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661663_44661748_44661850_44662121_44662220_44662640_44662699_44662903_44663018_44665503
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153986	chr7	-	4163	12	NIC	ENSMUSG00000038406.18	novel	4209	11	NA	NA	29	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	81.4000426421802	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGCGTAGTGGTGTACC	5315	False	NA	-6	True	ATTAAA	-17	NA	44665526	44652371	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661663_44661748_44661850_44662121_44662220_44662640_44662699_44662903_44663018_44663628_44663760_44665503
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000153992	chr7	+	983	6	FSM	ENSMUSG00000038387.10	ENSMUST00000044111.10	995	6	11	1	11	-1	multi-exon	FALSE	canonical	3	253	junction_4	17.1860408471527	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGATGCTTTTTATTTG	NA	False	NA	8	True	AATAAA	-16	NA	44667395	44671070	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_44667593_44669523_44669612_44669726_44669830_44669913_44670023_44670510_44670630_44670703
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154002	chr7	+	1826	9	FSM	ENSMUSG00000003421.14	ENSMUST00000003513.11	1814	9	-15	3	12	-3	multi-exon	FALSE	canonical	3	417	junction_1	63.7582102556212	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAATTCTTTGTTGTTTT	3070	False	NA	22	True	NA	NA	NA	44711864	44727631	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154024	chr7	-	1434	7	FSM	ENSMUSG00000019539.12	ENSMUST00000211352.2	1453	7	17	2	10	-2	multi-exon	FALSE	canonical	3	54	junction_6	48.2482008875864	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCTGTCTGTCTGTCTG	6677	False	NA	-6	True	AATAAA	-23	NA	44741628	44732338	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_44732788_44732989_44733190_44734327_44734389_44736088_44736262_44737921_44738125_44740864_44741113_44741528
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154048	chr7	-	679	5	FSM	ENSMUSG00000003429.12	ENSMUST00000003521.10	661	5	-17	-1	-17	1	multi-exon	FALSE	canonical	3	18027	junction_3	5229.01092463957	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGAGTCTCATGTGTCC	NA	False	NA	0	True	AATAAA	-25	NA	44773880	44771801	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_44771983_44772252_44772383_44772586_44772663_44772842_44772975_44773720
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154053	chr7	-	458	2	ISM	ENSMUSG00000003429.12	ENSMUST00000209838.2	449	4	417	-9	417	-5	3prime_fragment	FALSE	canonical	3	29497	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGGCTTGGAGTCTCAT	NA	False	NA	-6	True	AATAAA	-19	NA	44772535	44771807	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr7_-_44771983_44772252
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154055	chr7	-	859	4	NIC	ENSMUSG00000003429.12	novel	661	5	NA	NA	-21	-5	intron_retention	FALSE	canonical	3	18027	junction_2	5813.10830986506	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGGCTTGGAGTCTCAT	NA	False	NA	-6	True	AATAAA	-19	NA	44773796	44771807	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_44772383_44772586_44772663_44772842_44772975_44773720
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154061	chr7	-	1064	8	FSM	ENSMUSG00000074129.15	ENSMUST00000150350.9	1047	8	-17	0	-17	0	multi-exon	FALSE	canonical	3	11064	junction_7	2170.0381732747	1368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGATGTGTGCTGTGCAGA	NA	False	NA	-1	True	AATAAA	-19	NA	44778202	44774981	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154069	chr7	-	1175	8	FSM	ENSMUSG00000074129.15	ENSMUST00000209626.2	734	8	-1	-440	0	-5	multi-exon	FALSE	canonical	3	1166	junction_7	5527.98350879137	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTACGATGTGTGCTGT	NA	False	NA	-6	True	AATAAA	-14	NA	44778160	44774986	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44777965
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154082	chr7	-	572	7	FSM	ENSMUSG00000074129.15	ENSMUST00000209212.2	514	7	-34	-24	0	0	multi-exon	FALSE	canonical	3	332	junction_3	5972.4797311409	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776414_44776517_44776632_44776699_44776919_44776993_44778123
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154083	chr7	-	738	6	ISM	ENSMUSG00000074129.15	ENSMUST00000209626.2	734	8	1271	-81	359	0	3prime_fragment	FALSE	canonical	3	15796	junction_2	965.492703234986	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44776888	44775345	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154085	chr7	-	674	8	FSM	ENSMUSG00000074129.15	ENSMUST00000210967.2	658	8	-16	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	5939.18297480076	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778160	44775345	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_44775457_44775538_44775678_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154086	chr7	-	589	7	FSM	ENSMUSG00000074129.15	ENSMUST00000210191.2	562	7	-1	-26	0	0	multi-exon	FALSE	canonical	3	190	junction_2	7369.60067703053	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778161	44775345	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_44775457_44775538_44775678_44775901_44775962_44776414_44776517_44776632_44776699_44776919_44776993_44778123
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154110	chr7	-	2814	1	FSM	ENSMUSG00000065818.3	ENSMUST00000083884.3	90	1	-2300	-424	-2300	424	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778159	44775345	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_44775300_44778200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154117	chr7	-	2632	17	FSM	ENSMUSG00000007833.16	ENSMUST00000209963.2	3537	17	-17	922	-6	8	multi-exon	TRUE	canonical	3	349	junction_15	41.3256881370413	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGGGAACAGTGGCTTC	9316	False	NA	0	True	AATAAA	-28	NA	44804014	44791250	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44799087_44799191_44803815
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154125	chr7	-	2469	16	NIC	ENSMUSG00000007833.16	novel	3537	17	NA	NA	-10	2	combination_of_known_junctions	FALSE	canonical	3	27	junction_15	102.490454840113	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGGATGTGGGAACAGT	9370	False	NA	-6	True	AATAAA	-22	NA	44803960	44791256	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44803815
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154133	chr7	-	188	1	Intergenic	novelGene_4751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATCTTTTTAAAACCA	NA	False	NA	NA	False	NA	NA	NA	44802647	44802459	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_44802500_44802600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154143	chr7	+	1067	10	FSM	ENSMUSG00000003423.16	ENSMUST00000210139.2	1077	10	10	0	-1	0	multi-exon	FALSE	canonical	3	233	junction_1	50.5151242478703	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCAGACAATGATGCATG	NA	False	NA	21	True	AATAAA	-21	NA	44803736	44809489	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_44803845_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154148	chr7	+	1176	10	FSM	ENSMUSG00000003423.16	ENSMUST00000085375.13	1185	10	10	-1	10	0	multi-exon	FALSE	canonical	3	114	junction_1	85.8518678298646	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCAGACAATGATGCATG	NA	False	NA	21	True	AATAAA	-21	NA	44803747	44809489	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_44803965_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154161	chr7	+	2110	12	FSM	ENSMUSG00000030796.18	ENSMUST00000033060.14	2140	12	30	0	-8	0	multi-exon	FALSE	canonical	3	157	junction_1	60.1724793633042	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAAGGGGATTTATTTGA	5460	False	NA	NA	False	AATAAA	-38	NA	44865206	44883068	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_44865257_44866636_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154176	chr7	+	2081	12	NIC	ENSMUSG00000030796.18	novel	3396	11	NA	NA	26	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	97.4747265400093	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAAAACCCAAAGGGGAT	5555	False	NA	NA	False	AATAAA	-30	NA	44865301	44883060	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_44865331_44866636_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154189	chr7	+	202	1	Intergenic	novelGene_4752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTGTATACTACAGTCC	NA	False	NA	NA	False	NA	NA	NA	44891981	44892183	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_44892000_44892200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154209	chr7	+	189	1	Intergenic	novelGene_4753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATCTTTAAACATCTAAA	8431	False	NA	NA	False	NA	NA	NA	44951806	44951995	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_44951800_44952000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154214	chr7	-	4077	25	FSM	ENSMUSG00000038260.11	ENSMUST00000042194.10	4234	25	-35	192	-24	3	multi-exon	FALSE	canonical	3	102	junction_19	18.3832181168949	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTCCTGTGGAGCA	3166	False	NA	1	True	AATAAA	-26	NA	44983228	44952770	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982877_44983110
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154224	chr7	+	786	1	FSM	ENSMUSG00000046721.12	ENSMUST00000026901.12	653	1	-23	-110	-23	110	mono-exon	FALSE	NA	NA	NA	NA	NA	854	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGGCAGTGGTGGCACA	NA	False	NA	NA	False	NA	NA	NA	44974365	44975151	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_44974400_44975200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154273	chr7	+	187	1	Intergenic	novelGene_4754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCAGCCAGGCGGTGGTG	NA	False	NA	NA	False	NA	NA	NA	45053540	45053727	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_45053500_45053700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154284	chr7	-	216	1	Intergenic	novelGene_4755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCACCCAGAGAAACAGGGC	NA	False	NA	NA	False	TTTAAA	-3	NA	45062491	45062275	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_45062300_45062500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154294	chr7	-	1884	15	FSM	ENSMUSG00000003868.15	ENSMUST00000107771.12	1834	15	-4	-46	-4	45	multi-exon	FALSE	canonical	3	1951	junction_14	206.139144605714	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGAAAGCCTTTATTGGG	9178	False	NA	0	True	ACTAAA	-16	NA	45084051	45071275	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154309	chr7	-	1586	14	NIC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	-10	1	intron_retention	FALSE	canonical	3	1951	junction_13	209.501917066259	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCTGTGTCCTCAGAG	9518	False	NA	-2	True	TATAAA	-17	NA	45083711	45071319	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154321	chr7	+	3716	16	FSM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	-22	-16	-22	16	multi-exon	TRUE	canonical	3	89	junction_1	61.1041369757855	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTGGTGTGGTGGGT	1005	False	NA	41	True	AATACA	-37	NA	45084245	45106059	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_45084595_45085955_45086138_45087525_45087718_45088902_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154330	chr7	+	2207	7	NIC	ENSMUSG00000003865.17	novel	480	5	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	83.740505266103	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGCTGGACATAAGCTC	NA	False	NA	25	True	AATACA	-21	NA	45097031	45106043	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_45097078_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154338	chr7	-	931	4	FSM	ENSMUSG00000050708.17	ENSMUST00000094434.13	968	4	38	-1	-7	1	multi-exon	TRUE	canonical	3	56898	junction_1	7359.57672393974	3740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTTTTTTCTATATAT	NA	False	NA	-18	True	AATAAA	-18	NA	45109270	45107366	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_45107708_45107958_45108085_45108507_45108655_45108953
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154343	chr7	-	1645	2	FSM	ENSMUSG00000050708.17	ENSMUST00000211694.2	604	2	-1040	-1	0	0	multi-exon	FALSE	canonical	3	56898	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTTTTTTCTATATA	NA	False	NA	-19	True	AATAAA	-17	NA	45109263	45107367	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_45107708_45107958
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154344	chr7	-	1222	3	FSM	ENSMUSG00000050708.17	ENSMUST00000211500.2	825	3	-376	-21	0	0	multi-exon	FALSE	canonical	3	56898	junction_1	6244.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTTTTTTCTATATA	NA	False	NA	-19	True	AATAAA	-17	NA	45109263	45107367	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_45107708_45107958_45108085_45108507
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154345	chr7	-	1346	3	NIC	ENSMUSG00000050708.17	novel	943	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	56898	junction_1	8751.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTTTTTTCTATATA	NA	False	NA	-19	True	AATAAA	-17	NA	45109263	45107367	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_45107708_45107958_45108655_45108953
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154363	chr7	-	1174	3	NIC	ENSMUSG00000050708.17	novel	968	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	69387	junction_1	2507	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTTTTTTCTATATA	NA	False	NA	-19	True	AATAAA	-17	NA	45109263	45107367	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_45108085_45108507_45108655_45108953
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154366	chr7	-	1473	2	NIC	ENSMUSG00000050708.17	novel	968	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	69387	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTTTTTTCTATATA	NA	False	NA	-19	True	AATAAA	-17	NA	45109263	45107367	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_45108085_45108507
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154370	chr7	-	1597	2	NIC	ENSMUSG00000050708.17	novel	943	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	74401	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTTTTTTCTATATA	NA	False	NA	-19	True	AATAAA	-17	NA	45109263	45107367	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_45108655_45108953
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154377	chr7	-	1896	1	FSM	ENSMUSG00002076377.1	ENSMUST00020182363.1	109	1	-1642	-145	-1642	145	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTTTTTTCTATATA	NA	False	NA	-19	True	AATAAA	-17	NA	45109263	45107367	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_45107400_45109300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154392	chr7	-	887	6	FSM	ENSMUSG00000003873.12	ENSMUST00000033093.10	867	6	-18	-2	-18	2	multi-exon	FALSE	canonical	3	2296	junction_5	352.488638114762	577	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCCCTTGTCCGCCCAGC	9897	False	NA	0	True	AATAAA	-24	NA	45116340	45111118	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400_45115548_45115643_45115696_45116165
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154420	chr7	+	192	1	Intergenic	novelGene_4756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAGCACAAAAGAGGCCC	NA	False	NA	NA	False	NA	NA	NA	45119146	45119338	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_45119100_45119300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154431	chr7	+	197	1	Antisense	novelGene_ENSMUSG00000011382.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTCGGCCTCAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	45122631	45122828	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr7_+_45122600_45122800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154434	chr7	-	183	1	Intergenic	novelGene_4757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAATGTAATGAAAGA	2730	False	NA	NA	False	NA	NA	NA	45126058	45125875	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_45125900_45126100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154447	chr7	+	278	1	Intergenic	novelGene_4758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGTTTTGTTTTGTTT	920	False	NA	NA	False	NA	NA	NA	45129964	45130242	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_45130000_45130200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154450	chr7	-	2443	13	FSM	ENSMUSG00000030824.18	ENSMUST00000211765.2	4853	13	-6	2416	-6	234	multi-exon	FALSE	canonical	3	464	junction_7	37.8483817355511	540	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCTCAGTTGGCATAAT	NA	False	NA	-8	True	ATTAAA	-21	NA	45159836	45142297	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129_45159272_45159746
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154464	chr7	-	181	1	Intergenic	novelGene_4759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTTAAATTAC	NA	False	NA	NA	False	NA	NA	NA	45160796	45160615	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_45160600_45160800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154475	chr7	-	2705	2	NIC	ENSMUSG00000040435.13	novel	2333	3	NA	NA	44	0	intron_retention	FALSE	canonical	3	356	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTACGTGTGTTCTTTAT	3905	False	NA	44	True	AATAAA	-24	NA	45175648	45172340	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_45174816_45175418
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154479	chr7	-	3304	1	NIC	ENSMUSG00000040435.13	novel	2333	3	NA	NA	44	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTCTTACGTGTGTTCT	3905	False	NA	40	True	AATAAA	-20	NA	45175648	45172344	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_45172300_45175600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154484	chr7	-	234	1	Intergenic	novelGene_4760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTTTTTTTTTTTTTTT	2495	False	NA	NA	False	NA	NA	NA	45177058	45176824	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_45176800_45177100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154490	chr7	+	1367	9	FSM	ENSMUSG00000030825.20	ENSMUST00000107752.12	1400	9	26	7	-18	-4	multi-exon	FALSE	canonical	3	159	junction_3	205.455591308682	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATACCTTGGAGTGGTC	NA	False	NA	3	True	NA	NA	NA	45204342	45216738	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_45204491_45205478_45205518_45205736_45205820_45207031_45207099_45208804_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154504	chr7	+	226	1	Intergenic	novelGene_4761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGCACTTGGGAGGCAG	NA	False	NA	NA	False	NA	NA	NA	45204851	45205077	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_45204900_45205100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154509	chr7	+	1229	5	ISM	ENSMUSG00000030825.20	ENSMUST00000210997.2	1315	9	3138	4	-24	-4	3prime_fragment	FALSE	canonical	3	557	junction_3	22.2864869371554	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATACCTTGGAGTGGTC	NA	False	NA	3	True	NA	NA	NA	45208605	45216738	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr7_+_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154522	chr7	+	1588	11	FSM	ENSMUSG00000030826.20	ENSMUST00000033098.16	1772	11	183	1	-14	0	multi-exon	TRUE	canonical	3	349	junction_4	47.8895604490164	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGCTATCATGCTCTAA	2438	False	NA	NA	False	AATAAA	-17	NA	45219759	45239134	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_45219824_45224854_45224930_45225222_45225427_45234340_45234452_45234534_45234655_45234837_45235002_45237072_45237216_45237358_45237445_45237662_45237804_45237877_45237953_45238729
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154528	chr7	+	1821	8	ISM	ENSMUSG00000044562.13	ENSMUST00000057927.10	3202	12	4861	0	4861	0	3prime_fragment	FALSE	canonical	3	61	junction_1	11.5245965886278	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTTGTCAAGATTTGGG	4227	False	NA	6	True	AATAAA	-19	NA	45281772	45288517	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr7_+_45282314_45284240_45284279_45284390_45284543_45284639_45284756_45285761_45286006_45286143_45286317_45287293_45287442_45288108
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154545	chr7	-	2716	7	FSM	ENSMUSG00000057342.16	ENSMUST00000107737.11	3548	7	33	799	33	1	multi-exon	FALSE	canonical	3	70	junction_6	23.5141801189552	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGACATCCCTTTCAGTTA	3195	False	NA	-5	True	AATAAA	-36	NA	45367393	45359689	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416_45366488_45367124
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154549	chr7	-	2985	6	FSM	ENSMUSG00000057342.16	ENSMUST00000072836.7	2968	6	0	-17	0	-1	multi-exon	FALSE	canonical	3	46	junction_5	32.4678302324008	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCGACATCCCTTTCAGT	5957	False	NA	-7	True	AATAAA	-34	NA	45364631	45359691	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45364020
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154559	chr7	+	738	6	FSM	ENSMUSG00000059070.17	ENSMUST00000072503.13	679	6	-58	-1	-58	0	multi-exon	FALSE	canonical	3	6098	junction_1	973.20817916826	994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGTTCATTCATGAAG	5864	False	NA	17	True	AATAAA	-24	NA	45367436	45370260	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_45367564_45368676_45368764_45368952_45369061_45369343_45369443_45369717_45369912_45370137
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154571	chr7	+	1056	6	FSM	ENSMUSG00000059070.17	ENSMUST00000209287.2	1027	6	-29	0	16	0	multi-exon	FALSE	canonical	3	220	junction_1	3241.25016621673	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTCCTCTGTGTTCAT	5979	False	NA	9	True	AATAAA	-16	NA	45367551	45370252	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_45368005_45368676_45368764_45368952_45369061_45369343_45369443_45369717_45369912_45370137
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154580	chr7	-	1581	12	FSM	ENSMUSG00000003269.18	ENSMUST00000107729.10	2519	12	-5	943	0	29	multi-exon	FALSE	canonical	3	144	junction_4	92.1110540651432	217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCCTCATTTCTTGGGT	3157	False	NA	NA	False	NA	NA	NA	45463740	45457003	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457874_45459550_45459663_45459994_45460144_45460277_45460391_45460952_45461034_45461603_45461723_45462270_45462338_45462432_45462581_45463521
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154596	chr7	-	1933	7	FSM	ENSMUSG00000053801.19	ENSMUST00000107723.9	1898	7	-31	-4	-25	0	multi-exon	FALSE	canonical	3	447	junction_1	34.207292919623	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTCTGAGCTTCTTTGCT	8603	False	NA	0	True	AATAAA	-35	NA	45480244	45474646	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_45475518_45476564_45476763_45476949_45477093_45477203_45477418_45479405_45479569_45479715_45479834_45480018
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154613	chr7	+	1541	5	FSM	ENSMUSG00000002778.15	ENSMUST00000002855.14	1599	5	52	6	-1	-3	multi-exon	TRUE	canonical	3	208	junction_1	16.5378354085412	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTTTGCTGTTCCCTG	3996	False	NA	11	True	AATAAA	-15	NA	45522247	45533150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_45522526_45523182_45523284_45523466_45523626_45530923_45531177_45532400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154619	chr7	+	2165	8	FSM	ENSMUSG00000002781.20	ENSMUST00000069772.16	2297	8	137	-5	0	5	multi-exon	FALSE	canonical	3	12	junction_1	17.4414472344658	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTAGTGTGGCTGCAGGTC	5629	False	NA	12	True	AATAAA	-19	NA	45546501	45566842	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_45546526_45546858_45547091_45549055_45549161_45556341_45556537_45557530_45557662_45558745_45559026_45565506_45565697_45565834
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154653	chr7	-	1448	11	FSM	ENSMUSG00000030839.13	ENSMUST00000033127.12	1465	11	3	14	0	3	multi-exon	FALSE	canonical	3	75	junction_10	7.18609768928867	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCCCTGGAGAACCCTTC	NA	False	NA	-24	True	AATAAA	-21	NA	46289228	46092591	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_46092960_46165091_46165129_46240030_46240198_46264041_46264201_46268119_46268183_46270984_46271099_46275632_46275694_46282083_46282179_46283178_46283335_46284844_46284981_46289136
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154668	chr7	-	1518	12	FSM	ENSMUSG00000006763.15	ENSMUST00000143082.4	4728	12	15	3195	-4	1	multi-exon	FALSE	canonical	3	340	junction_6	40.4362573576105	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCATCGGGATGATGGTG	NA	False	NA	-11	True	AATAAA	-25	NA	46360089	46338726	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204_46351386_46351825_46351942_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154683	chr7	+	197	1	Intergenic	novelGene_4762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGGCATGGTGGTGCACA	8645	False	NA	NA	False	NA	NA	NA	46436281	46436478	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_46436300_46436500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154700	chr7	+	2791	16	NIC	ENSMUSG00000006599.14	novel	2736	15	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	187.878920821067	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCTCTTGGAGTCTT	4720	False	NA	4	True	AATAAA	-15	NA	46445540	46473224	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_46445713_46446820_46446890_46451095_46451265_46453240_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154708	chr7	+	185	1	Intergenic	novelGene_4763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTATTTCATATTTATA	NA	False	NA	NA	False	NA	NA	NA	46457419	46457604	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_46457400_46457600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154711	chr7	+	184	1	Intergenic	novelGene_4764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAACTCAAACGGGAAAT	NA	False	NA	NA	False	NA	NA	NA	46464417	46464601	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_46464400_46464600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154714	chr7	+	190	1	Intergenic	novelGene_4765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGGCAAGTTAGGGAAC	NA	False	NA	NA	False	NA	NA	NA	46474407	46474597	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_46474400_46474600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154720	chr7	+	197	1	Intergenic	novelGene_4766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCATCCTCTGTACGGGCT	NA	False	NA	NA	False	NA	NA	NA	46477952	46478149	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_46478000_46478100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154735	chr7	+	1651	9	NNC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	-46	63582	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	2722.83995811359	1524	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGCCTAAAAGATTAAAT	NA	False	NA	NA	False	NA	NA	NA	46495216	46568633	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400_46505048_46568612
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154741	chr7	+	1694	9	NIC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	37	junction_2	3566.89334146327	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	19	True	AATAAA	-15	NA	46495264	46505051	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_46495342_46496812_46496921_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154748	chr7	+	391	1	ISM	ENSMUSG00000063229.16	ENSMUST00000048209.16	1588	8	9398	0	6250	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	19	True	AATAAA	-15	NA	46504660	46505051	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr7_+_46504700_46505100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154765	chr7	-	1529	10	FSM	ENSMUSG00000014402.16	ENSMUST00000014546.15	1949	10	-1	421	-1	216	multi-exon	FALSE	canonical	3	992	junction_2	86.0289931030289	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTTCTTGGACTTGAGA	NA	False	NA	-30	True	AATAAA	-18	NA	46569718	46539117	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154787	chr7	+	201	1	Intergenic	novelGene_4767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGCAGATGTACATGTA	NA	False	NA	NA	False	NA	NA	NA	46579194	46579395	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_46579200_46579400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154812	chr7	-	3708	13	FSM	ENSMUSG00000046179.18	ENSMUST00000058745.15	3691	13	-17	0	-17	0	multi-exon	FALSE	canonical	3	118	junction_12	14.9024606469312	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACATTTTCATTTGGCC	NA	False	NA	-1	True	ATTAAA	-17	NA	48530806	48516176	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_48516978_48517401_48517788_48517906_48518040_48520438_48520965_48521560_48521649_48521833_48522035_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48530408
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154814	chr7	-	3601	13	FSM	ENSMUSG00000046179.18	ENSMUST00000119223.2	3499	13	-102	0	-102	0	multi-exon	FALSE	canonical	3	85	junction_12	21.1073644336126	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACATTTTCATTTGGCC	NA	False	NA	-1	True	ATTAAA	-17	NA	48531446	48516176	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_48516978_48517401_48517788_48517906_48518040_48520438_48520965_48521560_48521649_48521833_48522035_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48531155
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154828	chr7	-	180	1	Intergenic	novelGene_4768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAAATCCCTATTT	NA	False	NA	NA	False	NA	NA	NA	48571292	48571112	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_48571100_48571300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154839	chr7	-	195	1	Intergenic	novelGene_4769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCTCTCTCTTATAGTAA	NA	False	NA	NA	False	NA	NA	NA	49275944	49275749	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_49275700_49275900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154843	chr7	+	196	1	Intergenic	novelGene_4770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATGGACTGTTTTCAAT	NA	False	NA	NA	False	NA	NA	NA	49326072	49326268	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_49326100_49326300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154871	chr7	+	2517	16	FSM	ENSMUSG00000030505.18	ENSMUST00000032715.13	2507	16	-12	2	-12	-2	multi-exon	FALSE	canonical	3	379	junction_1	68.5528506579656	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACACTGAATGTTTTCATG	NA	False	NA	42	True	AATAAA	-26	NA	49428081	49508011	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154891	chr7	+	1282	1	FSM	ENSMUSG00000078636.5	ENSMUST00000107041.5	1232	1	-21	-29	-21	29	mono-exon	FALSE	NA	NA	NA	NA	NA	1162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTCAGTAGTTAAAAGAGT	NA	False	NA	NA	False	AATAAA	-43	NA	51396373	51397655	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_51396400_51397700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154901	chr7	-	1696	1	FSM	ENSMUSG00000092118.2	ENSMUST00000169357.2	1691	1	-5	0	-5	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTCTTTGTACAAGTC	NA	False	NA	4	True	ATTAAA	-19	NA	51512020	51510324	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_51510300_51512000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154919	chr7	+	191	1	Intergenic	novelGene_4771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGATCTCTCCATAACT	NA	False	NA	NA	False	NA	NA	NA	51716650	51716841	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_51716600_51716800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154928	chr7	-	526	2	Genic_Genomic	ENSMUSG00000099647.2	novel	321	1	NA	NA	-46	275	multi-exon	FALSE	canonical	3	158	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGTGCTACTTCAAAGC	NA	False	NA	NA	False	AATAAA	-40	NA	54062272	54061630	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr7_-_54062012_54062127
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154929	chr7	-	579	2	Genic_Genomic	ENSMUSG00000099647.2	novel	321	1	NA	NA	-46	275	multi-exon	FALSE	canonical	3	74	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGTGCTACTTCAAAGC	NA	False	NA	NA	False	AATAAA	-40	NA	54062272	54061630	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr7_-_54062012_54062074
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154939	chr7	+	3671	23	FSM	ENSMUSG00000033790.12	ENSMUST00000032627.5	3905	23	4	230	4	1	multi-exon	FALSE	canonical	3	52	junction_19	13.708973353728	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCTACCTATTTCATGT	NA	False	NA	16	True	AATAAA	-19	NA	55443905	55481195	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466205_55466405_55466986_55467176_55468461_55468645_55471526_55471612_55471725_55471847_55473267_55473447_55475327_55475454_55475980_55476070_55479078_55479180_55480589
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154945	chr7	+	178	1	Intergenic	novelGene_4772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAAAGTGAAT	NA	False	NA	NA	False	NA	NA	NA	55470212	55470390	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_55470200_55470400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154948	chr7	+	4530	31	FSM	ENSMUSG00000030447.16	ENSMUST00000032629.16	6440	31	10	1900	9	204	multi-exon	FALSE	canonical	3	493	junction_19	46.6292707308284	441	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTTTGTTCATTGGCATA	NA	False	NA	15	True	AATAAA	-18	NA	55491828	55580450	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154963	chr7	+	196	1	Antisense	novelGene_ENSMUSG00000108701.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAGGCAGCCTTGTTGGG	NA	False	NA	NA	False	NA	NA	NA	55577236	55577432	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr7_+_55577200_55577400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000154992	chr7	+	179	1	Intergenic	novelGene_4773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTGGTACAAGAAATATT	NA	False	NA	NA	False	NA	NA	NA	56544312	56544491	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_56544300_56544500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155016	chr7	+	4864	11	FSM	ENSMUSG00000025326.13	ENSMUST00000107537.5	4911	11	53	-6	2	4	multi-exon	FALSE	canonical	3	99	junction_1	51.6876194073591	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTCTTCAGTTTATT	NA	False	NA	13	True	AATAAA	-13	NA	58878551	58956481	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_58879020_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155024	chr7	-	6343	5	ISM	ENSMUSG00000077191.3_ENSMUSG00000100826.7	ENSMUST00000189581.7	6861	12	-3115	32206	0	0	5prime_fragment	FALSE	canonical	3	50	junction_4	15.4008928312614	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATAGTTTGTGTTTTTC	NA	False	NA	-6	True	ATTAAA	-20	NA	59628622	59619324	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr7_-_59620292_59621627_59621693_59623018_59623399_59623594_59623648_59623744
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155046	chr7	-	1575	12	NNC	ENSMUSG00000102252.6	novel	2076	11	NA	NA	-23510	-612	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	899.034477501023	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGTTTTTCTTTGTCTG	NA	False	NA	-9	True	AATAAA	-18	NA	59813477	59632861	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59721632_59721737_59781997_59782146_59813391
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155054	chr7	+	1638	1	FSM	ENSMUSG00000033585.6	ENSMUST00000038775.6	3694	1	1722	334	1722	-334	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACTGTGAAATAATTTCT	NA	False	NA	NA	False	AATAAA	-20	NA	61998038	61999676	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_61998000_61999700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155061	chr7	-	2564	1	FSM	ENSMUSG00000070527.4	ENSMUST00000094340.4	2547	1	-17	0	-17	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGACTCTTTTTTTAAT	NA	False	NA	0	True	AATAAA	-18	NA	62069904	62067340	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_62067300_62069900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155077	chr7	+	186	1	Intergenic	novelGene_4774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTGCTTTGGGCAAGGT	NA	False	NA	NA	False	NA	NA	NA	63439097	63439283	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_63439100_63439300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155091	chr7	+	182	1	Intergenic	novelGene_4775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAATGAATCAACC	NA	False	NA	NA	False	NA	NA	NA	63592109	63592291	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_63592100_63592300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155124	chr7	+	2000	11	NIC	ENSMUSG00000030523.19	novel	2575	11	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	301.433309373732	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGACTGAGTTTTCAGACT	NA	False	NA	27	True	ATTAAA	-24	NA	63835207	63861176	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_63835372_63836134_63836221_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155138	chr7	+	1243	1	Antisense	novelGene_ENSMUSG00000033458.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCCCTGCTACCTCCTCA	NA	False	NA	NA	False	AGTAAA	-19	NA	64022124	64023367	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr7_+_64022100_64023400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155165	chr7	-	227	1	Intergenic	novelGene_4776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCTTTTATTTCAACAG	NA	False	NA	NA	False	NA	NA	NA	64466597	64466370	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_64466400_64466600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155189	chr7	-	6836	27	NIC	ENSMUSG00000030516.15	novel	7049	28	NA	NA	-27	0	intron_retention	FALSE	canonical	3	43	junction_1	33.0858664117024	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTAGTTTGGTTTATTTG	NA	False	NA	NA	False	AATAAA	-16	NA	65021014	64945912	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_64947416_64949477_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65020557
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155190	chr7	-	6856	27	NIC	ENSMUSG00000030516.15	novel	7049	28	NA	NA	-26	0	intron_retention	FALSE	canonical	3	35	junction_1	34.2514198729572	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTAGTTTGGTTTATTTG	NA	False	NA	NA	False	AATAAA	-16	NA	65021013	64945912	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_64947416_64949456_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65020557
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155200	chr7	+	189	1	Intergenic	novelGene_4777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACAGAATGGCAATTTTG	NA	False	NA	NA	False	NA	NA	NA	64953232	64953421	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_64953200_64953400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155243	chr7	+	4220	21	FSM	ENSMUSG00000030513.15	ENSMUST00000098391.11	4207	21	-4	-9	-4	3	multi-exon	FALSE	canonical	3	46	junction_14	34.1808060174128	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTTGTATTTCTTTTCA	NA	False	NA	18	True	AATAAA	-23	NA	65511879	65700091	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_65512192_65559949_65560055_65576941_65577047_65577563_65577708_65578854_65578932_65581424_65581514_65602666_65602840_65608844_65609058_65612651_65612753_65618715_65618820_65620289_65620408_65629894_65630084_65633460_65633598_65674975_65675156_65681496_65681600_65683497_65683695_65684928_65685017_65688728_65688833_65693262_65693393_65697304_65697418_65698653
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155245	chr7	+	4259	22	FSM	ENSMUSG00000030513.15	ENSMUST00000055576.12	4405	22	103	43	-4	3	multi-exon	FALSE	canonical	3	127	junction_4	20.9878487682365	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTTGTATTTCTTTTCA	NA	False	NA	18	True	AATAAA	-23	NA	65511879	65700091	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_65512192_65559949_65560055_65576941_65577047_65577563_65577708_65578854_65578932_65581424_65581514_65602666_65602840_65608844_65609058_65612651_65612753_65618715_65618820_65620289_65620408_65629894_65630084_65633460_65633598_65674975_65675156_65675313_65675353_65681496_65681600_65683497_65683695_65684928_65685017_65688728_65688833_65693262_65693393_65697304_65697418_65698653
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155258	chr7	-	173	1	Intergenic	novelGene_4778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATAATGTTGCGCT	2218	False	NA	NA	False	NA	NA	NA	65525568	65525395	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_65525400_65525600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155270	chr7	+	964	8	FSM	ENSMUSG00000030512.14	ENSMUST00000032723.9	955	8	-5	-4	-5	-3	multi-exon	FALSE	canonical	3	89	junction_5	1022.69418095299	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGTGTGCTGTGTATCT	NA	False	NA	20	True	AATAAA	-20	NA	65710286	65724332	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_65710441_65711871_65712020_65713514_65713594_65718914_65718962_65719171_65719275_65720337_65720414_65720979_65721074_65724069
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155285	chr7	+	1197	6	FSM	ENSMUSG00000075701.11	ENSMUST00000101801.8	1191	6	-2	-4	-2	4	multi-exon	FALSE	canonical	3	410	junction_5	18.3804243694209	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGGTTTTTCTTATTT	NA	False	NA	11	True	AGTAAA	-20	NA	65729394	65739157	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_65729538_65730079_65730215_65733147_65733255_65736694_65736785_65736940_65737020_65738514
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155295	chr7	+	4270	3	FSM	ENSMUSG00000032640.11	ENSMUST00000036372.8	4176	3	-96	2	-96	-2	multi-exon	FALSE	canonical	3	165	junction_1	21	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCATTTTGTCTCATTAT	NA	False	NA	27	True	AATAAA	-34	NA	65759166	65823544	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_65759976_65774989_65775486_65820579
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155339	chr7	+	2914	3	FSM	ENSMUSG00000043831.13	ENSMUST00000058771.13	2898	3	-9	-7	3	0	multi-exon	FALSE	canonical	3	45	junction_1	19.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATTCTCCCTCTTTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	66872346	66878211	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_66872378_66873356_66873640_66875611
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155344	chr7	+	3301	3	FSM	ENSMUSG00000043831.13	ENSMUST00000208998.2	2110	3	5	-1196	5	0	multi-exon	FALSE	canonical	3	29	junction_1	27.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATTCTCCCTCTTTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	66872368	66878211	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_66872787_66873356_66873640_66875611
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155348	chr7	-	5401	11	FSM	ENSMUSG00000030557.18	ENSMUST00000107476.8	4759	11	29	-671	-2	-84	multi-exon	FALSE	canonical	3	36	junction_7	5.22015325445528	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTAAGACAATGCTTGAG	NA	False	NA	NA	False	AATAAA	-25	NA	67022577	66880994	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66945122_66945327_66966539_66966731_66999616_66999670_67022460
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155358	chr7	-	2804	10	NIC	ENSMUSG00000030556.14	novel	2923	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_5	13.5026289164118	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTCTTCTCTCCTCCTGT	596	False	NA	-2	True	AATAAA	-16	NA	67294955	67163157	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209718_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155371	chr7	+	2209	11	FSM	ENSMUSG00000030555.17	ENSMUST00000107471.8	2216	11	8	-1	8	1	multi-exon	FALSE	canonical	3	46	junction_1	12.2429571591181	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTTGTGTGTTTGAAAT	NA	False	NA	14	True	AATAAA	-19	NA	67297180	67376325	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_67297594_67312074_67312275_67316910_67317035_67319445_67319597_67319799_67319926_67328641_67328820_67347971_67348078_67359071_67359200_67361101_67361252_67374981_67375065_67375775
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155380	chr7	+	192	1	Intergenic	novelGene_4779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAACAAGATGGGAGAGAC	NA	False	NA	NA	False	NA	NA	NA	67463249	67463441	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_67463200_67463400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155383	chr7	+	196	1	Intergenic	novelGene_4780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAGACAAAGCATAAA	NA	False	NA	NA	False	NA	NA	NA	67727937	67728133	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_67727900_67728100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155391	chr7	-	179	1	Intergenic	novelGene_4781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGAGTGAGTGGGGCCG	NA	False	NA	NA	False	NA	NA	NA	67869856	67869677	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_67869700_67869900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155403	chr7	+	2844	9	FSM	ENSMUSG00000074071.12	ENSMUST00000210558.2	2815	9	-40	11	-40	-6	multi-exon	FALSE	canonical	3	103	junction_5	20.4328167417025	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTTAATTTTAGGACTTT	NA	False	NA	47	True	AATAAA	-18	NA	67925702	68012829	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_67925790_67950580_67950712_67954299_67954400_67971567_67971654_67978969_67979148_67999981_68000165_68003356_68003492_68007932_68008037_68010989
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155419	chr7	-	3914	8	FSM	ENSMUSG00000042659.16	ENSMUST00000048068.15	3905	8	-6	-3	-6	3	multi-exon	FALSE	canonical	3	375	junction_1	213.33809518495	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGGCTCATTTTTTTCT	NA	False	NA	0	True	AATAAA	-19	NA	68398995	68386739	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_68389282_68389632_68389788_68390702_68390866_68391392_68391650_68392319_68392423_68394529_68394678_68394892_68394960_68398516
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155429	chr7	-	1119	5	FSM	ENSMUSG00000042659.16	ENSMUST00000118110.3	1129	5	-59	69	-6	-69	multi-exon	FALSE	canonical	3	754	junction_4	68.2289344779764	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATCTCTAATTATTGCA	NA	False	NA	0	True	ATTAAA	-39	NA	68398995	68391327	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_68391650_68392319_68392423_68394529_68394678_68394892_68394960_68398516
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155456	chr7	+	186	1	Intergenic	novelGene_4782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAATAGAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	73075486	73075672	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_73075500_73075700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155469	chr7	-	201	1	Intergenic	novelGene_4783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGAGATGTGTGTGAAC	NA	False	NA	NA	False	TATAAA	-8	NA	73168251	73168050	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_73168000_73168300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155482	chr7	+	221	1	Intergenic	novelGene_4784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTAATCACTGAACGGT	NA	False	NA	NA	False	TTTAAA	-12	NA	73296197	73296418	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_73296200_73296400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155487	chr7	-	222	1	Intergenic	novelGene_4785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTAAATTCTTCCCCTA	8400	False	NA	NA	False	AAGAAA	-19	NA	73302550	73302328	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_73302300_73302600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155502	chr7	-	196	1	Intergenic	novelGene_4786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTAATGAACAAAGG	NA	False	NA	NA	False	NA	NA	NA	73625696	73625500	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_73625500_73625700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155504	chr7	+	216	1	Intergenic	novelGene_4787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTACTTAATTCTCTCTC	NA	False	NA	NA	False	NA	NA	NA	75012956	75013172	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_75013000_75013200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155514	chr7	-	4078	1	FSM	ENSMUSG00000097415.3	ENSMUST00000206358.2	3009	1	-1069	0	-1069	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTAGTGGTCTTGCCC	NA	False	NA	0	True	NA	NA	NA	75422863	75418785	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_75418800_75422900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155521	chr7	-	179	1	Intergenic	novelGene_4788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAATAATATGGGAATCA	NA	False	NA	NA	False	NA	NA	NA	75469060	75468881	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_75468900_75469100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155537	chr7	-	172	1	Intergenic	novelGene_4789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAGGAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	75521969	75521797	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_75521800_75522000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155555	chr7	+	858	6	FSM	ENSMUSG00000030611.11	ENSMUST00000032840.5	1056	6	198	0	4	0	multi-exon	FALSE	canonical	3	364	junction_2	39.2153031353833	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTGTGAGTTTTTGTTC	NA	False	NA	3	True	AATAAA	-16	NA	78433064	78442737	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_78433172_78433320_78433429_78438422_78438522_78440384_78440515_78441621_78441688_78442389
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155564	chr7	-	2251	5	FSM	ENSMUSG00000030610.14	ENSMUST00000032839.13	2269	5	21	-3	21	1	multi-exon	FALSE	canonical	3	86	junction_2	8.89873586527884	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCTTCCTTGATGT	NA	False	NA	0	True	AATAAA	-21	NA	78496990	78477218	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_78477861_78483858_78484051_78489752_78489941_78492919_78494013_78496854
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155587	chr7	+	2010	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107421.8	2007	4	-2	-1	-2	1	multi-exon	FALSE	canonical	3	314	junction_1	165.023903992388	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAACTGGTCCTTTCTGGA	NA	False	NA	NA	False	AATAAA	-19	NA	78545679	78558130	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_78545763_78552091_78552579_78555590_78555792_78556891
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155601	chr7	-	2036	9	FSM	ENSMUSG00000030605.16	ENSMUST00000107409.5	2008	9	-27	-1	-20	1	multi-exon	TRUE	canonical	3	790	junction_6	144.155948541848	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGCCTCCTCATTGC	NA	False	NA	-4	True	AATACA	-20	NA	78798828	78783514	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_78784295_78784399_78784550_78786404_78786590_78791392_78791538_78792149_78792303_78792616_78792799_78794994_78795127_78795369_78795493_78798642
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155609	chr7	-	2138	10	FSM	ENSMUSG00000030605.16	ENSMUST00000032825.14	2125	10	-12	-1	-12	0	multi-exon	FALSE	canonical	3	296	junction_6	379.595691346581	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGTGCCTCCTCATTG	NA	False	NA	-5	True	AATACA	-19	NA	78798820	78783515	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_78784295_78784399_78784550_78786404_78786590_78791392_78791538_78792149_78792303_78792616_78792799_78793025_78793137_78794994_78795127_78795369_78795493_78798642
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155619	chr7	+	216	1	Intergenic	novelGene_4790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACCTGCTAGTTGATGCC	2446	False	NA	NA	False	NA	NA	NA	78898458	78898674	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_78898500_78898700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155632	chr7	+	4662	38	FSM	ENSMUSG00000039187.17	ENSMUST00000036865.13	4645	38	-8	-9	-4	9	multi-exon	TRUE	canonical	3	260	junction_14	37.7798783892034	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGAAAATGGGTCAGCG	NA	False	NA	21	True	AATAAA	-22	NA	79042051	79100021	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155637	chr7	+	4644	38	NIC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_31	65.5515454678326	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79042057	79100012	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094425_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155661	chr7	+	211	1	Intergenic	novelGene_4791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTACATACTTGAAGCTAT	NA	False	NA	NA	False	NA	NA	NA	79112537	79112748	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_79112500_79112700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155670	chr7	+	190	1	Intergenic	novelGene_4792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGTAACATACCCAATTA	692	False	NA	NA	False	NA	NA	NA	79273978	79274168	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_79274000_79274200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155673	chr7	+	129	1	Intergenic	novelGene_4793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTAGATTATTATACAT	NA	False	NA	4	True	AATAAA	-12	NA	79289897	79290026	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_79289900_79290000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155681	chr7	+	175	1	Intergenic	novelGene_4794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGCCTTGAACTCCTGA	5529	False	NA	NA	False	NA	NA	NA	79296096	79296271	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_79296100_79296300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155690	chr7	+	7174	22	FSM	ENSMUSG00000046591.11	ENSMUST00000035977.9	7199	22	25	0	-1	0	multi-exon	FALSE	canonical	3	202	junction_6	27.6640028223357	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTATTACTTTCCCAGTT	1949	False	NA	16	True	ATTAAA	-26	NA	79309968	79347896	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79325157_79326974_79327194_79328762_79328915_79330655_79330757_79331557_79331652_79331737_79331818_79331996_79332225_79332703_79332801_79333951_79334010_79335524_79335687_79337973_79338065_79339655_79339715_79340619_79340752_79341569_79341728_79343448_79345571_79345682_79345809_79346401
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155711	chr7	-	175	1	Intergenic	novelGene_4795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGTATGTATGTCAGAC	NA	False	NA	NA	False	NA	NA	NA	79396896	79396721	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_79396700_79396900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155730	chr7	-	1385	6	FSM	ENSMUSG00000063801.8	ENSMUST00000075657.8	5813	6	-4	4432	-4	2754	multi-exon	FALSE	canonical	3	250	junction_1	30.5653398476117	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCAGTGCTGTGCTGTGA	NA	False	NA	0	True	AATACA	-21	NA	79570401	79529504	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_79530361_79532213_79532322_79559582_79559655_79564894_79565007_79565763_79565856_79570256
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155740	chr7	+	331	1	Intergenic	novelGene_4796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGAGGACAATGTCCCCT	NA	False	NA	NA	False	TTTAAA	-14	NA	79658794	79659125	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_79658800_79659100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155782	chr7	-	183	2	Intergenic	novelGene_4797	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	137	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAAACCTGGGAG	9041	False	NA	NA	False	NA	NA	NA	79781739	79700268	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_79700404_79781691
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155792	chr7	-	1726	11	FSM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	20	-1	20	1	multi-exon	FALSE	canonical	3	1495	junction_5	201.26112391617	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGATGTGTTTGTCCC	NA	False	NA	-4	True	AAAAAG	-14	NA	79765120	79744592	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79747704_79747883_79748021_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155802	chr7	-	2351	9	NIC	ENSMUSG00000030541.17	novel	1745	11	NA	NA	12	0	intron_retention	FALSE	canonical	3	1616	junction_4	183.33980575696	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGATGTGTTTGTCC	NA	False	NA	-5	True	AAAAAG	-13	NA	79765068	79744593	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155809	chr7	-	2090	10	NIC	ENSMUSG00000030541.17	novel	1745	11	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	1495	junction_4	203.626988921616	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGATGTGTTTGTCC	NA	False	NA	-5	True	AAAAAG	-13	NA	79765068	79744593	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_79745462_79745546_79745645_79745770_79745884_79747551_79747704_79747883_79748021_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155814	chr7	+	181	1	Intergenic	novelGene_4798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGTAAAAGGAGG	6112	False	NA	NA	False	NA	NA	NA	79817355	79817536	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_79817400_79817500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155819	chr7	+	3794	15	FSM	ENSMUSG00000030539.14	ENSMUST00000032754.9	3949	15	29	126	-8	-10	multi-exon	FALSE	canonical	3	35	junction_1	17.3394972033593	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGCCCACATTCCTGA	NA	False	NA	18	True	AATAAA	-20	NA	79836617	79876149	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_79836740_79848266_79848519_79862543_79862708_79863010_79863074_79865371_79865471_79866076_79866189_79866477_79866592_79866695_79866848_79868630_79868813_79868933_79869085_79869868_79870080_79870189_79870306_79870535_79870703_79873681_79873765_79874343
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155830	chr7	-	983	7	FSM	ENSMUSG00000030538.16	ENSMUST00000065163.15	1047	7	55	9	-27	3	multi-exon	FALSE	canonical	3	721	junction_2	48.5546656414763	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTTGTATGATGGTAGC	2106	False	NA	-9	True	AATAAA	-18	NA	79882506	79876903	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79880063_79880173_79882091_79882127_79882257
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155857	chr7	+	1330	3	FSM	ENSMUSG00000047084.9	ENSMUST00000117989.2	1317	3	-9	-4	-9	4	multi-exon	FALSE	canonical	3	448	junction_2	14	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCTTGGTTCTCTTCTC	NA	False	NA	17	True	AATAAA	-17	NA	79910953	79915126	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_79911172_79911568_79911680_79914125
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155871	chr7	+	2583	23	FSM	ENSMUSG00000030534.14	ENSMUST00000032749.12	2574	23	-9	0	-9	0	multi-exon	FALSE	canonical	3	97	junction_6	14.9188576657057	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTTTTTTGTTTGT	NA	False	NA	17	True	AATAAA	-21	NA	79919387	79941327	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_79919828_79923976_79924058_79924371_79924434_79925793_79925844_79926145_79926214_79929719_79929766_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935379_79935581_79935647_79935758_79935814_79936855_79936903_79937525_79937659_79938147_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155879	chr7	+	3087	15	FSM	ENSMUSG00000038943.17	ENSMUST00000174172.8	3008	15	-72	-7	-17	2	multi-exon	FALSE	canonical	3	316	junction_13	238.868890688544	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTGTCTTCAATGGTT	NA	False	NA	20	True	AATAAA	-30	NA	79944180	79966009	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79963274_79963317_79964861
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155883	chr7	+	2960	14	FSM	ENSMUSG00000038943.17	ENSMUST00000173824.8	2912	14	-40	-8	-11	0	multi-exon	FALSE	canonical	3	387	junction_13	177.415201846273	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTGTCTTCAATGG	NA	False	NA	18	True	AATAAA	-28	NA	79944186	79966007	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79964861
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155908	chr7	+	2971	15	NIC	ENSMUSG00000038943.17	novel	3008	15	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_13	288.475240333922	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTGTTTTGTCTTCAAT	NA	False	NA	16	True	AATAAA	-26	NA	79944215	79966005	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79963274_79963317_79964861
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155910	chr7	+	3008	14	FSM	ENSMUSG00000038943.17	ENSMUST00000163812.9	3026	14	18	0	3	0	multi-exon	FALSE	canonical	3	144	junction_13	239.092317096712	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTGTCTTCAATGG	NA	False	NA	18	True	AATAAA	-28	NA	79944215	79966007	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79964861
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155934	chr7	-	3210	20	NIC	ENSMUSG00000030533.17	novel	3932	22	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	31	junction_19	16.1947975641576	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTGTTTGTTGTTGTAG	NA	False	NA	NA	False	AATAAA	-16	NA	79989959	79975039	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_79975626_79975760_79975917_79976056_79976175_79977330_79977447_79977665_79977780_79978200_79978268_79978440_79978569_79978769_79978911_79979253_79979396_79980085_79980181_79981300_79981602_79982724_79982897_79983767_79983939_79984442_79984612_79986053_79986222_79986672_79986766_79988588_79988765_79989061_79989099_79989298_79989461_79989861
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155942	chr7	-	3255	20	FSM	ENSMUSG00000030533.17	ENSMUST00000032748.15	3260	20	8	-3	0	0	multi-exon	FALSE	canonical	3	61	junction_19	11.9833679753749	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTGTTTGTTGTTGTAG	NA	False	NA	NA	False	AATAAA	-16	NA	79989959	79975039	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_79975626_79975760_79975917_79976056_79976175_79977330_79977447_79977665_79977780_79978200_79978268_79978440_79978569_79978769_79978911_79979253_79979396_79980085_79980181_79981300_79981602_79982724_79982897_79983767_79983939_79984442_79984612_79986053_79986222_79986672_79986766_79988588_79988765_79989061_79989099_79989298_79989461_79989816
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155953	chr7	+	188	1	Intergenic	novelGene_4799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATACTATCTACCCAACA	665	False	NA	NA	False	NA	NA	NA	80014880	80015068	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_80014900_80015100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155958	chr7	-	4347	16	FSM	ENSMUSG00000030530.16	ENSMUST00000122232.8	4286	16	-61	0	-61	0	multi-exon	FALSE	canonical	3	55	junction_15	14.0469055508876	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGTCTCCAGTGTCTAT	3618	False	NA	0	True	ATTAAA	-22	NA	80052571	80038941	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_80041045_80041255_80041367_80041475_80041601_80041934_80042115_80042217_80042336_80042421_80042526_80042631_80042733_80043156_80043370_80045082_80045256_80045707_80045797_80046676_80046754_80046869_80046999_80047645_80047742_80047842_80047942_80048341_80048677_80052277
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155966	chr7	-	4529	22	FSM	ENSMUSG00000030528.13	ENSMUST00000081314.11	4598	22	-16	85	-16	14	multi-exon	FALSE	canonical	3	335	junction_6	41.4509518092853	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCTCAGAGCATCTGT	NA	False	NA	-19	True	AATAAA	-36	NA	80184883	80104825	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_80105185_80108560_80108745_80110477_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155978	chr7	+	202	1	Intergenic	novelGene_4800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTCCAGTACAGCCAG	4244	False	NA	NA	False	NA	NA	NA	80202840	80203042	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_80202800_80203000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155985	chr7	-	7363	38	FSM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	89	-8	-46	8	multi-exon	FALSE	canonical	3	539	junction_37	55.7931586507513	456	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTTGGTTTTATTGTT	NA	False	NA	-1	True	AATAAA	-27	NA	80453075	80361322	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000155996	chr7	+	189	1	Intergenic	novelGene_4801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTTCAGCTGGGTGGT	NA	False	NA	NA	False	NA	NA	NA	80369635	80369824	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_80369600_80369800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156001	chr7	+	192	1	Intergenic	novelGene_4802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGAAATGGGAAATAGTT	NA	False	NA	NA	False	NA	NA	NA	80422129	80422321	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_80422100_80422300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156011	chr7	-	2083	8	FSM	ENSMUSG00000025722.17	ENSMUST00000026816.15	2114	8	31	0	-4	0	multi-exon	FALSE	canonical	3	95	junction_7	16.071269840486	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTGTGTGTATGAGT	NA	False	NA	-3	True	AATAAA	-16	NA	80550986	80540470	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391_80550460_80550932
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156024	chr7	+	182	1	Intergenic	novelGene_4803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAAGGCGTTGGGAT	NA	False	NA	NA	False	NA	NA	NA	80548470	80548652	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_80548500_80548700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156041	chr7	-	181	1	Intergenic	novelGene_4804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	80603581	80603400	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_80603400_80603600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156056	chr7	+	1981	9	ISM	ENSMUSG00000025726.12	ENSMUST00000119083.2	2899	18	27008	0	27008	0	3prime_fragment	FALSE	canonical	3	108	junction_1	7.38135319572231	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTGTGTACAGTGTG	NA	False	NA	11	True	AATAAA	-20	NA	80791605	80820164	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr7_+_80791793_80803147_80803274_80810712_80810844_80814018_80814188_80814273_80814472_80817713_80817796_80818711_80818811_80818914_80819027_80819287
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156084	chr7	-	567	5	FSM	ENSMUSG00000061787.16	ENSMUST00000080813.5	494	5	-70	-3	-70	2	multi-exon	FALSE	canonical	3	8882	junction_4	1855.19963548401	548	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTATTGTTCTTGCTG	NA	False	NA	-7	True	AATAAA	-15	NA	80995072	80992477	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_80992598_80993482_80993549_80994058_80994165_80994604_80994757_80994949
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156093	chr7	-	3096	12	NIC	ENSMUSG00000025586.18	novel	3111	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_5	10.3116719552358	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTAGTTTTGTCTCTGTA	NA	False	NA	0	True	AATAAA	-15	NA	81104506	80996773	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006656_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104381
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156103	chr7	-	3661	26	NIC	ENSMUSG00000062444.16	novel	3806	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_25	13.1209755734854	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTCACCTTTCCTTC	NA	False	NA	1	True	AATAAA	-17	NA	81139558	81110146	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173_81134270_81134583_81134659_81134781_81134858_81139285
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156148	chr7	+	1422	3	FSM	ENSMUSG00000038646.14	ENSMUST00000042166.11	1452	3	30	0	30	0	multi-exon	FALSE	canonical	3	441	junction_1	195	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTAGTTTTGACAGCCC	NA	False	NA	NA	False	AATAAA	-30	NA	81412702	81419239	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_81412805_81417274_81417472_81418116
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156154	chr7	-	751	5	NNC	ENSMUSG00000025102.15	novel	405	4	NA	NA	11	1899	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	126.089254102005	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAGCCTACAACAAAATG	NA	False	NA	NA	False	NA	NA	NA	81439202	81430030	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_-_81430319_81432778_81432887_81435824_81435953_81438197_81438325_81439102
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156160	chr7	-	772	5	FSM	ENSMUSG00000025102.15	ENSMUST00000026092.9	887	5	13	102	0	-102	multi-exon	FALSE	canonical	0	0	junction_4	120.296508677517	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTAATGTCAGTTATTT	NA	False	NA	-1	True	AGTAAA	-17	NA	81439213	81432031	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197_81438325_81439102
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156169	chr7	-	3060	8	FSM	ENSMUSG00000025103.9	ENSMUST00000026093.9	3001	8	-55	-4	-55	4	multi-exon	FALSE	canonical	3	689	junction_4	90.4076933695809	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCACCTCTCTTTTTCT	NA	False	NA	0	True	AATAAA	-22	NA	81479234	81441817	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_81443475_81443905_81444053_81446743_81446832_81450705_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81478720
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156176	chr7	-	3142	9	NNC	ENSMUSG00000025103.9	novel	3001	8	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_4	316.438555449553	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTGTCACCTCTCTTT	NA	False	NA	-4	True	AATAAA	-18	NA	81479213	81441821	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_-_81443475_81443905_81444053_81446743_81446832_81450132_81450240_81450705_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81478720
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156185	chr7	-	194	1	Intergenic	novelGene_4805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAGTAAAATGT	NA	False	NA	NA	False	NA	NA	NA	81465416	81465222	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_81465200_81465400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156197	chr7	+	1623	9	FSM	ENSMUSG00000030638.14	ENSMUST00000032874.14	1647	9	24	0	-22	0	multi-exon	FALSE	canonical	3	252	junction_3	40.04040927613	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGTTATTTTCAATGTC	NA	False	NA	17	True	AATAAA	-24	NA	81824567	81956627	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_81824768_81909339_81909409_81917487_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156208	chr7	+	1588	9	FSM	ENSMUSG00000030638.14	ENSMUST00000177895.8	1486	9	-107	5	1	-5	multi-exon	FALSE	canonical	3	79	junction_3	89.2394951801051	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGACTGGTTATTTTCA	NA	False	NA	12	True	AATAAA	-19	NA	81824590	81956622	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_81824768_81909339_81909409_81917487_81917561_81919987_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156215	chr7	+	3610	20	FSM	ENSMUSG00000038563.15	ENSMUST00000179489.8	3608	20	-7	5	-7	-5	multi-exon	FALSE	canonical	3	42	junction_1	25.8006420500325	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAAACCGTTTGTTTAA	NA	False	NA	33	True	AATAAA	-38	NA	82297814	82427055	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_82297858_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086_82347226_82399999_82400132_82402781_82402930_82411642_82412623_82421664_82421850_82426698
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156218	chr7	+	3637	20	FSM	ENSMUSG00000038563.15	ENSMUST00000039881.4	3610	20	-34	7	-7	-7	multi-exon	FALSE	canonical	3	73	junction_1	22.1664566531058	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCCAAACCGTTTGTTT	NA	False	NA	31	True	AATAAA	-36	NA	82297814	82427053	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_82297887_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086_82347226_82399999_82400132_82402781_82402930_82411642_82412623_82421664_82421850_82426698
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156237	chr7	-	184	1	ISM	ENSMUSG00000087088.3	ENSMUST00000208892.2	8508	2	12296	919	12258	-919	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGGATGTATTTATTAT	NA	False	NA	NA	False	NA	NA	NA	83268792	83268608	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr7_-_83268600_83268800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156266	chr7	+	2101	3	FSM	ENSMUSG00000038503.16	ENSMUST00000094215.10	4492	3	50	2341	48	1111	multi-exon	FALSE	canonical	3	1312	junction_2	6.5	243	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGTCCTCCAGTGATG	NA	False	NA	35	True	AATAAA	-30	NA	83541257	83548399	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_83541684_83544737_83544971_83546957
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156294	chr7	-	1595	7	NIC	ENSMUSG00000030629.16	novel	2955	7	NA	NA	4	9	combination_of_known_junctions	FALSE	canonical	3	150	junction_5	197.190615620746	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTTTCCCTCTTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	84339087	84264252	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283199_84283446_84283618_84338953
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156304	chr7	-	1551	7	FSM	ENSMUSG00000030629.16	ENSMUST00000178385.9	1538	7	-4	-9	0	9	multi-exon	FALSE	canonical	3	57	junction_6	230.002475832085	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTTTCCCTCTTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	84328604	84264252	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84328517
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156320	chr7	-	1630	7	FSM	ENSMUSG00000030629.16	ENSMUST00000209117.2	2955	7	46	1279	-28	9	multi-exon	FALSE	canonical	3	577	junction_5	69.5045961709648	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTTTCCCTCTTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	84339119	84264252	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84338953
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156333	chr7	+	1921	7	FSM	ENSMUSG00000030560.18	ENSMUST00000032779.12	2493	7	0	572	0	-572	multi-exon	FALSE	canonical	3	323	junction_5	18.6100331362771	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTTCTATGTGTGTTTA	NA	False	NA	17	True	AATAAA	-22	NA	87927292	87959524	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_87927583_87930594_87930741_87946290_87946458_87948652_87948806_87951392_87951509_87957220_87957353_87958607
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156345	chr7	+	195	1	Intergenic	novelGene_4806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTCCTAACCTTAGAAT	NA	False	NA	NA	False	NA	NA	NA	88201989	88202184	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_88202000_88202200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156349	chr7	-	3385	15	FSM	ENSMUSG00000039428.12	ENSMUST00000041968.11	3700	15	8	307	8	-307	multi-exon	FALSE	canonical	3	153	junction_2	15.7941154115276	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGAGAGATATTTTT	NA	False	NA	1	True	AGTAAA	-24	NA	88987987	88789228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88800685_88803235_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88893128_88893195_88929174_88929209_88953888_88953982_88956344_88956473_88987655
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156359	chr7	+	207	1	Intergenic	novelGene_4807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	483	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCTCAAACAGGGCAGGA	NA	False	NA	NA	False	NA	NA	NA	88877920	88878127	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_88877900_88878100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156367	chr7	+	172	1	Intergenic	novelGene_4808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGAAAATGGTTGC	NA	False	NA	NA	False	NA	NA	NA	88992132	88992304	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_88992100_88992300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156378	chr7	-	186	1	Intergenic	novelGene_4809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGCTGTAATCTTGTCC	NA	False	NA	NA	False	NA	NA	NA	89119571	89119385	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_89119400_89119600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156380	chr7	-	828	4	FSM	ENSMUSG00000062797.15	ENSMUST00000208357.2	806	4	-3	-19	2	3	multi-exon	FALSE	canonical	3	430	junction_3	356.664485974642	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTAACCTTTTCGTTT	NA	False	NA	17	True	AATAAA	-36	NA	89590410	89567892	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89590176
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156389	chr7	-	1063	5	FSM	ENSMUSG00000062797.15	ENSMUST00000153470.9	2224	5	2	1159	2	0	multi-exon	FALSE	canonical	3	695	junction_3	227.142026054185	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTGTAACCTTTTCG	NA	False	NA	14	True	AATAAA	-33	NA	89590410	89567895	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89584934_89585173_89590176
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156412	chr7	-	1943	12	NIC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	7	-15	combination_of_known_junctions	FALSE	canonical	3	461	junction_2	565.94251087883	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTGTAATGTTTACTT	NA	False	NA	-23	True	AATAAA	-12	NA	89630177	89603882	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_89604272_89604738_89604813_89605551_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156431	chr7	+	3476	19	FSM	ENSMUSG00000039361.12	ENSMUST00000207225.2	3489	19	13	0	-4	0	multi-exon	FALSE	canonical	3	87	junction_13	27.4656350938971	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTACGGTGTTCTGGTTTG	NA	False	NA	19	True	AATAAA	-20	NA	89779433	89858140	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156441	chr7	+	215	1	Intergenic	novelGene_4810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCTAAAATTAAGAACTCT	NA	False	NA	NA	False	NA	NA	NA	90090857	90091072	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_90090900_90091100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156453	chr7	+	3968	1	FSM	ENSMUSG00000051451.7	ENSMUST00000061767.5	3376	1	52	-644	52	644	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTCTTACTATTTTTA	NA	False	NA	NA	False	ATTAAA	-22	NA	90091988	90095956	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_90092000_90096000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156478	chr7	-	743	5	FSM	ENSMUSG00000030615.13	ENSMUST00000136652.8	756	5	8	5	8	-5	multi-exon	FALSE	canonical	3	71	junction_2	308.308591349641	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGTCTGCAACATTAAAA	1674	False	NA	NA	False	AATAAA	-14	NA	90106408	90099912	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_90100144_90100750_90100866_90101936_90102109_90104631_90104728_90106279
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156480	chr7	-	773	5	FSM	ENSMUSG00000030615.13	ENSMUST00000032844.7	799	5	21	5	0	-5	multi-exon	FALSE	canonical	3	739	junction_4	32.5297940356222	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGTCTGCAACATTAAAA	1666	False	NA	NA	False	AATAAA	-14	NA	90106416	90099912	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_90100144_90100750_90100866_90101914_90102109_90104631_90104728_90106279
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156490	chr7	-	2262	5	FSM	ENSMUSG00000030614.9	ENSMUST00000032843.9	2259	5	5	-8	-1	8	multi-exon	FALSE	canonical	3	210	junction_1	24.1389208540896	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGGTCCCTGTGCTCACA	6025	False	NA	NA	False	NA	NA	NA	90125204	90116637	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_90118370_90118777_90118890_90119972_90120167_90121805_90121928_90125102
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156509	chr7	+	187	1	Intergenic	novelGene_4811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGTTTGTGATGTTAAA	NA	False	NA	NA	False	NA	NA	NA	92218964	92219151	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_92219000_92219200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156515	chr7	-	5827	16	FSM	ENSMUSG00000041328.17	ENSMUST00000119954.9	5995	16	-1	169	-1	-169	multi-exon	FALSE	canonical	3	78	junction_15	55.0229850961295	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTTGTATTTCTTGA	NA	False	NA	-2	True	AATAAA	-16	NA	92319143	92292919	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_92293986_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515_92308075_92309005_92309097_92309207_92309389_92310166_92311285_92312669_92312865_92313174_92313364_92314947_92315074_92318636
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156533	chr7	+	235	1	Intergenic	novelGene_4812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCAAGTTTTTCTACTC	7749	False	NA	NA	False	AATAAA	-20	NA	92401160	92401395	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_92401200_92401400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156536	chr7	-	3388	6	FSM	ENSMUSG00000030641.11	ENSMUST00000032877.11	3387	6	1	-2	1	2	multi-exon	FALSE	canonical	3	123	junction_4	35.6168499449348	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTTGTTATAATTTTT	NA	False	NA	1	True	AGTAAA	-20	NA	92523454	92506730	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_92509521_92510607_92510726_92511532_92511695_92515778_92515908_92521969_92522053_92523348
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156567	chr7	+	235	1	Intergenic	novelGene_4813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATACATTTGCGTATACA	NA	False	NA	NA	False	NA	NA	NA	96402218	96402453	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_96402200_96402500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156580	chr7	+	2480	14	FSM	ENSMUSG00000018995.13	ENSMUST00000044466.12	3778	14	36	1262	20	524	multi-exon	FALSE	canonical	3	94	junction_6	11.3976017408833	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAGAAGTTATTTTTAAA	7378	False	NA	10	True	ATTAAA	-22	NA	96600747	96712703	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_96601152_96605150_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706753_96708992_96709020_96711775
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156586	chr7	+	196	1	Intergenic	novelGene_4814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGACTATTACATACATATA	8620	False	NA	NA	False	NA	NA	NA	96627716	96627912	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_96627700_96627900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156590	chr7	-	178	1	Intergenic	novelGene_4815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAAGAAGTTTG	6446	False	NA	NA	False	NA	NA	NA	96945415	96945237	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_96945200_96945400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156597	chr7	+	2974	2	FSM	ENSMUSG00000044952.6	ENSMUST00000054107.6	2966	2	-5	-3	-5	3	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTCTGCTTCCAAAG	NA	False	NA	NA	False	GATAAA	-10	NA	96981528	96999423	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_96981579_96996499
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156603	chr7	+	2008	13	FSM	ENSMUSG00000035704.18	ENSMUST00000098300.6	2039	13	8	23	8	-23	multi-exon	TRUE	canonical	3	93	junction_8	19.8289560996034	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGTGTTTTGGGTCCTTG	NA	False	NA	40	True	TATAAA	-29	NA	97020820	97041369	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_97020940_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037655_97037796_97039448_97039547_97040095_97040169_97040734
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156615	chr7	+	631	3	FSM	ENSMUSG00000030647.9	ENSMUST00000032882.9	683	3	50	2	50	-2	multi-exon	FALSE	canonical	3	2164	junction_2	233	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTCCTTTCCTGGTTCT	NA	False	NA	19	True	ATTAAA	-18	NA	97049259	97057007	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_97049565_97056072_97056217_97056825
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156630	chr7	+	191	1	Intergenic	novelGene_4816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACAGCAGACCCAGTCCT	9816	False	NA	NA	False	NA	NA	NA	97121498	97121689	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_97121500_97121700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156638	chr7	+	3198	23	FSM	ENSMUSG00000025133.10	ENSMUST00000026126.10	3240	23	46	-4	-1	3	multi-exon	FALSE	canonical	3	369	junction_9	43.027187253819	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTAGTTTCTGGTCC	979	False	NA	29	True	AATAAA	-17	NA	97130208	97190605	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156641	chr7	+	3194	23	NNC	ENSMUSG00000025133.10	novel	3240	23	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_1	91.9439732384675	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTAGTTTCTGGTCC	980	False	NA	29	True	AATAAA	-17	NA	97130209	97190605	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_+_97130358_97134126_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156702	chr7	+	2146	15	NIC	ENSMUSG00000030774.14	novel	2794	15	NA	NA	1	-43	combination_of_known_splicesites	TRUE	canonical	3	45	junction_1	51.4204358644479	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAACTCCGACCCCTCATG	NA	False	NA	2	True	AATAAA	-11	NA	97437748	97560446	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_97438182_97503645_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156710	chr7	-	4465	13	FSM	ENSMUSG00000035547.15	ENSMUST00000040971.14	4498	13	33	0	33	0	multi-exon	FALSE	canonical	3	136	junction_9	14.761765552339	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGTTTCATTTTTCC	NA	False	NA	1	True	AATAAA	-23	NA	97827448	97770765	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97827250
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156722	chr7	+	186	1	Intergenic	novelGene_4817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGTATTGAAACTCA	NA	False	NA	NA	False	NA	NA	NA	97854080	97854266	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_97854100_97854300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156731	chr7	-	3923	11	FSM	ENSMUSG00000030760.15	ENSMUST00000033020.14	11340	11	-2	7419	-2	-150	multi-exon	FALSE	canonical	3	186	junction_1	20.7511445467473	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTTTTGGAAGAAAATCT	NA	False	NA	1	True	AATAAA	-20	NA	97958747	97863014	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_97866098_97867262_97867309_97873118_97873224_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97915343_97915455_97958554
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156737	chr7	+	177	1	Intergenic	novelGene_4818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATTCACATAATTTA	NA	False	NA	NA	False	NA	NA	NA	97930226	97930403	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_97930200_97930400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156745	chr7	-	2555	2	FSM	ENSMUSG00000049580.13	ENSMUST00000206414.2	2310	2	-45	-200	-5	0	multi-exon	FALSE	canonical	3	40	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCATTTGCTGACAAATC	NA	False	NA	2	True	AATAAA	-30	NA	98010540	97999874	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_98002338_98010448
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156769	chr7	+	3794	6	FSM	ENSMUSG00000030753.16	ENSMUST00000126356.8	1123	6	24	-2695	24	0	multi-exon	FALSE	canonical	3	28	junction_2	87.2958189147682	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGTGAGGTGTTTTTG	NA	False	NA	12	True	AATAAA	-19	NA	98352333	98367269	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_98352686_98356203_98356325_98357143_98357239_98359332_98359441_98362065_98362103_98364188
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156774	chr7	+	170	1	Intergenic	novelGene_4819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAGAATCTTTTTTTT	NA	False	NA	10	True	NA	NA	NA	98439097	98439267	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_98439100_98439300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156780	chr7	-	3440	15	FSM	ENSMUSG00000035354.10	ENSMUST00000037968.10	5157	15	-4	1721	-4	8	multi-exon	FALSE	canonical	3	139	junction_11	14.4016722385043	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCCCCCAGCTTTGTTT	NA	False	NA	-10	True	AATAAA	-27	NA	98790352	98535948	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98715006_98715090_98737307_98737383_98748518_98748681_98758269_98758305_98767394_98767513_98790040
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156809	chr7	-	2263	8	FSM	ENSMUSG00000030747.6	ENSMUST00000033001.6	2262	8	-1	0	-1	0	multi-exon	FALSE	canonical	3	97	junction_4	10.965623464226	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTTGTTGCTTAATGC	NA	False	NA	NA	False	AATAAA	-18	NA	98831927	98802864	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_98803908_98806183_98806387_98807359_98807535_98808039_98808245_98813841_98813913_98814288_98814397_98818904_98819034_98831598
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156815	chr7	-	1780	6	FSM	ENSMUSG00000052396.8	ENSMUST00000064231.8	1780	6	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_3	4.4	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTCTTTTCTCTCTCC	NA	False	NA	-1	True	AATAAA	-20	NA	98887826	98868290	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_98869167_98871459_98871660_98872199_98872375_98872707_98872913_98881664_98881844_98887681
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156827	chr7	-	175	1	Intergenic	novelGene_4820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATGCAACGTGAGCC	NA	False	NA	NA	False	NA	NA	NA	98899736	98899561	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_98899600_98899700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156837	chr7	+	2329	3	FSM	ENSMUSG00000055407.15	ENSMUST00000107100.3	2335	3	6	0	6	0	multi-exon	FALSE	canonical	3	44	junction_2	18	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGTCTCTGGCTCTGTG	NA	False	NA	13	True	AATAAA	-19	NA	98917558	98986344	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_98918521_98964895_98965110_98985191
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156838	chr7	+	4057	3	FSM	ENSMUSG00000055407.15	ENSMUST00000127492.2	4920	3	863	0	6	0	multi-exon	FALSE	canonical	3	32	junction_2	24	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTTCTTGATCGTATTT	NA	False	NA	6	True	AATAAA	-16	NA	98917558	98969559	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_98918521_98964895_98965110_98966678
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156858	chr7	-	2247	5	FSM	ENSMUSG00000070436.13	ENSMUST00000094154.6	2215	5	-19	-13	-19	0	multi-exon	FALSE	canonical	3	1409	junction_4	114.233313879971	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAAGCCTGTGATTTATG	NA	False	NA	NA	False	ATTAAA	-30	NA	99002465	98994582	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002259
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156866	chr7	-	2222	5	FSM	ENSMUSG00000070436.13	ENSMUST00000169437.9	2274	5	0	52	0	-33	multi-exon	FALSE	canonical	3	46	junction_4	667.492462504259	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTGTGTGAAAGCAGATT	NA	False	NA	51	True	AATAAA	-21	NA	99002321	98994634	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002088
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156867	chr7	-	2217	5	NIC	ENSMUSG00000070436.13	novel	2274	5	NA	NA	0	-33	intron_retention	FALSE	canonical	3	88	junction_4	649.473777376731	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTGTGTGAAAGCAGATT	NA	False	NA	51	True	AATAAA	-21	NA	99002321	98994634	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002093
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156870	chr7	-	2042	5	NNC	ENSMUSG00000070436.13	novel	2173	6	NA	NA	0	-33	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_4	656.33694662117	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTGTGTGAAAGCAGATT	NA	False	NA	51	True	AATAAA	-21	NA	99002321	98994634	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998663_99002259
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156872	chr7	-	2099	6	FSM	ENSMUSG00000070436.13	ENSMUST00000207849.2	2128	6	-4	33	-4	-33	multi-exon	FALSE	canonical	3	30	junction_5	741.154936568596	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTGTGTGAAAGCAGATT	NA	False	NA	51	True	AATAAA	-21	NA	99002325	98994634	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99001030_99001075_99002259
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156876	chr7	-	2135	6	FSM	ENSMUSG00000070436.13	ENSMUST00000208119.2	2173	6	0	38	0	-33	multi-exon	FALSE	canonical	3	37	junction_5	754.843400977978	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTGTGTGAAAGCAGATT	NA	False	NA	51	True	AATAAA	-21	NA	99002321	98994634	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002088_99002173_99002259
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156900	chr7	+	197	1	Intergenic	novelGene_4821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACATGTAAGAATGGGACA	NA	False	NA	NA	False	NA	NA	NA	99124638	99124835	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_99124600_99124800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156918	chr7	-	183	1	Intergenic	novelGene_4822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGTTTAAAAAAAGTTGGT	7194	False	NA	NA	False	NA	NA	NA	99157482	99157299	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_99157300_99157500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156925	chr7	+	196	1	Antisense	novelGene_ENSMUSG00000035227.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTCAGAACTGCTATGC	NA	False	NA	NA	False	NA	NA	NA	99493530	99493726	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr7_+_99493500_99493700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156937	chr7	-	3009	12	NNC	ENSMUSG00000030726.17	novel	3069	12	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_4	154.789059343876	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGCGAGTTGGAGT	NA	False	NA	-4	True	AATAAA	-18	NA	99770709	99731317	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742692_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99770570
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156954	chr7	+	193	1	Intergenic	novelGene_4823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAGAGCTTAAATCTGGA	NA	False	NA	NA	False	NA	NA	NA	99979685	99979878	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_99979700_99979900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156983	chr7	+	200	1	Intergenic	novelGene_4824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATTCTTGTAAATTTT	NA	False	NA	38	True	NA	NA	NA	100169704	100169904	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_100169700_100169900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156988	chr7	-	202	1	Intergenic	novelGene_4825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGAGGCTGGGTTTCTCTG	NA	False	NA	NA	False	TTTAAA	-11	NA	100179499	100179297	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_100179300_100179500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000156994	chr7	+	834	2	FSM	ENSMUSG00000044881.8	ENSMUST00000054310.4	1391	2	0	557	0	33	multi-exon	FALSE	canonical	3	255	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAAGTGCCTCTATCTTTC	7571	False	NA	29	True	AATAAA	-38	NA	100186306	100189019	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_100186400_100188278
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157004	chr7	-	925	8	FSM	ENSMUSG00000030706.18	ENSMUST00000150042.8	4285	8	-6	3366	2	120	multi-exon	FALSE	canonical	3	320	junction_4	76.5855530682877	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTTTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	100232315	100198323	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_100198590_100199746_100199837_100201785_100201889_100208954_100209125_100214400_100214487_100220458_100220497_100223668_100223722_100232196
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157020	chr7	+	3110	8	FSM	ENSMUSG00000030704.15	ENSMUST00000032946.10	3214	8	104	0	0	0	multi-exon	FALSE	canonical	3	462	junction_3	112.157687827342	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGTTCACATTCTTTATT	NA	False	NA	11	True	AATAAA	-19	NA	100256896	100290475	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100279044_100279151_100280948_100281061_100283851_100283946_100285901_100285969_100288461
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157022	chr7	+	3110	8	FSM	ENSMUSG00000030704.15	ENSMUST00000098252.5	3110	8	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_3	204.582800960832	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGTTCACATTCTTTATT	NA	False	NA	11	True	AATAAA	-19	NA	100256896	100290475	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100278872_100278979_100280948_100281061_100283851_100283946_100285901_100285969_100288461
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157038	chr7	-	180	1	Intergenic	novelGene_4826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATTGCAGGGGGGGA	NA	False	NA	NA	False	NA	NA	NA	100423711	100423531	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_100423500_100423700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157042	chr7	+	210	1	Intergenic	novelGene_4827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTCCTTTATAAGACTT	5325	False	NA	NA	False	NA	NA	NA	100478345	100478555	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_100478300_100478600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157055	chr7	+	191	1	Intergenic	novelGene_4828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	630	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGAGATTTAAATATATAC	NA	False	NA	NA	False	NA	NA	NA	100633169	100633360	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_100633200_100633400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157089	chr7	+	2980	21	FSM	ENSMUSG00000032812.19	ENSMUST00000098243.4	3693	21	21	692	21	0	multi-exon	FALSE	canonical	3	23	junction_1	25.1838738084513	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGAGGCCTGTGATG	NA	False	NA	18	True	TATAAA	-23	NA	101043595	101061101	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_101043675_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157098	chr7	-	166	1	Intergenic	novelGene_4829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAATCAAGGTGGGCAAA	NA	False	NA	NA	False	NA	NA	NA	101276523	101276357	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_101276400_101276500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157118	chr7	+	200	1	Intergenic	novelGene_4830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATTAATAAATCCCTAG	NA	False	NA	NA	False	NA	NA	NA	101446549	101446749	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_101446500_101446700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157127	chr7	-	4777	29	FSM	ENSMUSG00000032737.14	ENSMUST00000165052.8	4730	29	-40	-7	-40	0	multi-exon	FALSE	canonical	3	95	junction_28	22.1558429663829	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTCCGTTCCCCGACG	NA	False	NA	-1	True	AATAAA	-43	NA	101487050	101471838	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486927
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157141	chr7	+	169	1	Intergenic	novelGene_4831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACATGACCTCAAACGGG	NA	False	NA	NA	False	NA	NA	NA	101473991	101474160	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_101474000_101474200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157149	chr7	+	172	1	Intergenic	novelGene_4832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTTGACCCTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	101496506	101496678	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_101496500_101496700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157156	chr7	-	185	1	Intergenic	novelGene_4833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAAAGATTTGTTTATT	NA	False	NA	NA	False	NA	NA	NA	101497245	101497060	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_101497100_101497200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157159	chr7	-	1223	5	ISM	ENSMUSG00000001827.13	ENSMUST00000106986.9	1286	7	1958	14	-58	-14	3prime_fragment	FALSE	canonical	3	257	junction_4	35.4788669492136	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTATGAATTATTTGGG	3518	False	NA	-14	True	AATAAA	-17	NA	101517932	101507551	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131_101513302_101517604
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157166	chr7	+	852	6	FSM	ENSMUSG00000030649.19	ENSMUST00000144207.9	3103	6	-53	2304	24	1	multi-exon	FALSE	canonical	3	304	junction_1	109.312396369305	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTATTCCCTGTTTGTTG	7773	False	NA	26	True	AATAAA	-26	NA	101545570	101548752	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_101545658_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157185	chr7	+	1266	6	NIC	ENSMUSG00000030649.19	novel	818	5	NA	NA	-3	1	intron_retention	FALSE	canonical	3	43	junction_1	203.291318063512	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTATTCCCTGTTTGTTG	8269	False	NA	26	True	AATAAA	-26	NA	101546066	101548752	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_101546568_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157191	chr7	+	1149	5	FSM	ENSMUSG00000030842.13	ENSMUST00000033131.12	1119	5	-30	0	-30	0	multi-exon	FALSE	canonical	3	733	junction_4	69.0230939613692	224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTCTGTCCTGCCCACT	6997	False	NA	28	True	GATAAA	-32	NA	101555080	101561110	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_101555248_101558870_101559017_101559235_101559314_101559626_101559754_101560479
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157203	chr7	+	7094	25	NIC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	-3	4	combination_of_known_junctions	FALSE	canonical	3	160	junction_1	65.3807226091062	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTAAGCTCTTTGGGTCA	2090	False	NA	32	True	AATAAA	-20	NA	101583314	101664166	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_101583383_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157213	chr7	+	7197	25	NIC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	9	4	combination_of_known_junctions	FALSE	canonical	3	126	junction_1	69.0609131290792	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTAAGCTCTTTGGGTCA	2129	False	NA	32	True	AATAAA	-20	NA	101583353	101664166	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_101583525_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157229	chr7	-	2256	9	FSM	ENSMUSG00000070426.13	ENSMUST00000096639.12	2249	9	-7	0	-7	0	multi-exon	FALSE	canonical	3	288	junction_4	49.7203114933927	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCCTTTTTTTTTTTGCC	NA	False	NA	0	True	AATAAA	-34	NA	101714372	101668343	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684669_101688756_101688899_101691833_101691872_101714272
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157270	chr7	-	4698	23	FSM	ENSMUSG00000063550.9	ENSMUST00000211235.2	3748	23	-37	-913	-3	638	multi-exon	FALSE	canonical	3	124	junction_13	14.0777064247632	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTTGTATCATTACTCAT	9967	False	NA	-7	True	NA	NA	NA	101859386	101782771	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157288	chr7	+	204	1	Intergenic	novelGene_4834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	517	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGATTAAGAACTCAAGAAG	NA	False	NA	NA	False	NA	NA	NA	101798106	101798310	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_101798100_101798300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157292	chr7	+	193	1	Intergenic	novelGene_4835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTCTCATATCACAACTA	NA	False	NA	NA	False	NA	NA	NA	101813821	101814014	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_101813800_101814000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157302	chr7	+	194	1	Intergenic	novelGene_4836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATTAACAAGAATGGATG	5974	False	NA	NA	False	NA	NA	NA	101826719	101826913	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_101826700_101826900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157307	chr7	+	208	1	Intergenic	novelGene_4837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCATGAAGCCCAGGTT	NA	False	NA	NA	False	NA	NA	NA	101831889	101832097	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_101831900_101832100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157327	chr7	+	2035	7	FSM	ENSMUSG00000030990.19	ENSMUST00000033292.14	1201	7	-33	-801	8	-3	multi-exon	FALSE	canonical	3	107	junction_5	27.0657635317306	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGGTAGGTATGTTGC	602	False	NA	13	True	AATAAA	-20	NA	101872242	101887771	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_101872358_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885762_101886328_101886438_101886607
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157334	chr7	+	1889	6	NIC	ENSMUSG00000030990.19	novel	1201	7	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	55.9692772867401	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGGTAGGTATGTTGC	636	False	NA	13	True	AATAAA	-20	NA	101872276	101887771	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_101872358_101875477_101875653_101885300_101885554_101885654_101885762_101886328_101886438_101886607
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157356	chr7	+	234	1	Intergenic	novelGene_4838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	261	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTCCTTCTTGCTAT	442	False	NA	NA	False	AAAAAG	-37	NA	102066196	102066430	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_102066200_102066400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157364	chr7	+	3181	19	FSM	ENSMUSG00000030978.11	ENSMUST00000033283.10	3997	19	-14	830	-14	259	multi-exon	FALSE	canonical	3	773	junction_6	74.8152456899951	805	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCATCTATTATCATAC	NA	False	NA	NA	False	AATAAA	-29	NA	102090887	102118148	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157388	chr7	+	3580	8	FSM	ENSMUSG00000072244.12	ENSMUST00000098180.10	3827	8	2	245	2	-245	multi-exon	FALSE	canonical	2	421	junction_3	109.572825470701	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCTTCTTACTCTGTA	NA	False	NA	16	True	AATAAA	-17	NA	103868003	103884114	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157405	chr7	+	3622	8	NIC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	-20	-245	intron_retention	FALSE	canonical	2	115	junction_1	215.402423574185	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCTTCTTACTCTGTA	NA	False	NA	16	True	AATAAA	-17	NA	103868615	103884114	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_103868745_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157406	chr7	+	3576	9	NNC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	-20	-245	intron_retention	TRUE	canonical	0	0	junction_8	276.31221018985	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCTTCTTACTCTGTA	NA	False	NA	16	True	AATAAA	-17	NA	103868615	103884114	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_+_103868745_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157435	chr7	-	3499	13	FSM	ENSMUSG00000044465.20	ENSMUST00000122327.7	3521	13	24	-2	0	0	multi-exon	TRUE	canonical	3	82	junction_12	109.388038905337	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	105049215	105027816	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105049090
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157459	chr7	-	2853	12	FSM	ENSMUSG00000044465.20	ENSMUST00000118726.8	2855	12	1	1	1	0	multi-exon	FALSE	canonical	3	18	junction_3	116.98315199737	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGTGCTCATTCTTCT	NA	False	NA	-12	True	TATAAA	-12	NA	105049214	105027818	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105033581_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157467	chr7	+	197	1	Intergenic	novelGene_4839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATGCACGAGCTGGGTG	NA	False	NA	NA	False	NA	NA	NA	105167804	105168001	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_105167800_105168000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157471	chr7	+	2383	6	FSM	ENSMUSG00000037049.10	ENSMUST00000046983.10	2412	6	27	2	27	-2	multi-exon	FALSE	canonical	3	35	junction_2	5.53534100123922	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGTTCCTATTTCTTCTT	NA	False	NA	9	True	AATAAA	-19	NA	105203593	105207594	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_105204045_105204428_105205202_105205713_105205886_105206124_105206202_105206556_105206703_105206830
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157491	chr7	+	207	1	Intergenic	novelGene_4840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGCAGAAACATGGGCT	NA	False	NA	NA	False	NA	NA	NA	105238104	105238311	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_105238100_105238300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157503	chr7	-	1830	8	FSM	ENSMUSG00000030881.16	ENSMUST00000131446.8	3275	8	28	1417	28	1	multi-exon	FALSE	canonical	3	112	junction_3	9.16515138991168	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTGAGGTCAATTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	105289595	105284826	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_105285601_105286017_105286193_105286327_105286486_105287025_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157513	chr7	+	475	3	FSM	ENSMUSG00000089847.9	ENSMUST00000106783.8	3273	3	511	2287	0	2	multi-exon	FALSE	canonical	3	351	junction_1	22.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTTGTCTATGGGTACC	NA	False	NA	9	True	AATAAA	-18	NA	105289773	105290557	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_105289830_105289968_105290065_105290234
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157547	chr7	-	3552	13	FSM	ENSMUSG00000030894.6	ENSMUST00000033184.6	3558	13	6	0	6	0	multi-exon	FALSE	canonical	3	275	junction_12	25.3212690571912	267	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTTGTATTGTAAATGT	NA	False	NA	NA	False	NA	NA	NA	105401436	105394017	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105400796_105400937_105401188_105401261_105401377
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157563	chr7	-	145	1	Intergenic	novelGene_4841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAATGGGGAAGAGGT	NA	False	NA	-1	True	NA	NA	NA	105451727	105451582	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_105451600_105451700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157582	chr7	+	1534	1	FSM	ENSMUSG00000073894.2	ENSMUST00000098135.2	1472	1	-55	-7	-55	7	mono-exon	FALSE	NA	NA	NA	NA	NA	216	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTAGTAGTCTTCCTTCT	NA	False	NA	27	True	NA	NA	NA	106808596	106810130	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_106808600_106810100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157588	chr7	+	987	4	NNC	ENSMUSG00000057215.7	novel	1294	6	NA	NA	-14	-4402	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	8.98146239020499	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGTGTGTTTGTCCCA	NA	False	NA	12	True	AATAAA	-19	NA	106842214	106895201	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_+_106842336_106883988_106884145_106884819_106884938_106894609
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157596	chr7	+	3891	7	FSM	ENSMUSG00000062542.12	ENSMUST00000073459.12	3817	7	-74	0	-12	0	multi-exon	FALSE	canonical	3	144	junction_2	10.4628974104797	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCGTTGTCTCATTAAAT	NA	False	NA	NA	False	AGTAAA	-19	NA	106969922	107147863	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_106970355_107024253_107024606_107035481_107036029_107101299_107101421_107103368_107103541_107105695_107105826_107145726
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157607	chr7	+	177	1	Intergenic	novelGene_4842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAGTAAGAGAAGCAA	4109	False	NA	NA	False	NA	NA	NA	107171098	107171275	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_107171100_107171300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157614	chr7	+	183	1	Intergenic	novelGene_4843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAGCTAAAGAGTTAAAA	NA	False	NA	NA	False	NA	NA	NA	107230034	107230217	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_107230000_107230200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157663	chr7	+	2577	1	FSM	ENSMUSG00000065016.3	ENSMUST00000083082.3	132	1	-924	-1521	-924	1521	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGCATCCTTCCTTGT	NA	False	NA	8	True	ATTAAA	-20	NA	109118402	109120979	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_109118400_109121000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157698	chr7	+	963	6	FSM	ENSMUSG00000031023.6	ENSMUST00000033335.6	1028	6	62	3	0	-3	multi-exon	FALSE	canonical	3	170	junction_1	91.1249691357972	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCATTTTATTGCTATT	NA	False	NA	NA	False	AATAAA	-22	NA	109302958	109311393	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_109302984_109303152_109303378_109304157_109304239_109306604_109306719_109308147_109308229_109310956
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157718	chr7	+	188	1	Intergenic	novelGene_4844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAGTTTTGAAAT	NA	False	NA	NA	False	NA	NA	NA	109376031	109376219	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_109376000_109376200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157724	chr7	+	204	1	Intergenic	novelGene_4845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	819	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCCTGAAGTATAACTCCA	NA	False	NA	NA	False	NA	NA	NA	109427846	109428050	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_109427800_109428000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157734	chr7	-	219	1	Intergenic	novelGene_4846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTGGAGGTGTGTGTC	8492	False	NA	NA	False	NA	NA	NA	109485560	109485341	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_109485300_109485600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157740	chr7	-	5004	23	FSM	ENSMUSG00000035901.15	ENSMUST00000080437.13	5004	23	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_12	18.0282148014056	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACTGGTCACTGGCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	109559677	109492986	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_109494023_109495449_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109520400_109520719_109526033_109526222_109532819_109533478_109533899_109534010_109534688_109534761_109559280
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157755	chr7	+	376	1	Intergenic	novelGene_4847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCGGTAGTGTACGCCT	NA	False	NA	NA	False	NA	NA	NA	109584074	109584450	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_109584100_109584400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157771	chr7	+	5061	25	FSM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	-23	-275	-23	275	multi-exon	FALSE	canonical	0	0	junction_2	191.489515052391	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGTGAAGGGGTGCAT	7175	False	NA	14	True	AATAAA	-26	NA	109617457	109656091	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157774	chr7	+	4769	25	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	231.289497377685	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTTGTGTTTTTC	7189	False	NA	NA	False	AAGAAA	-2	NA	109617471	109655816	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651920_109652125_109653206_109653324_109654223
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157786	chr7	+	2807	15	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	287.995748267936	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCTTGATCTGATTGC	7239	False	NA	23	True	ATTAAA	-18	NA	109617521	109655324	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109650680_109650735_109651917_109652125_109653206_109653324_109654223
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157789	chr7	+	3417	26	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	233.88532574747	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTGATCTGATTGCAAT	7239	False	NA	26	True	ATTAAA	-21	NA	109617521	109655327	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223_109654345_109655160
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157806	chr7	+	3031	16	FSM	ENSMUSG00000061079.15	ENSMUST00000211798.2	2631	16	-22	-378	-22	2	multi-exon	TRUE	canonical	3	74	junction_4	56.3191698171137	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTGTTTGTTTCATTAA	NA	False	NA	21	True	AATACA	-19	NA	109660894	109694603	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_109660983_109668690_109668810_109669684_109669778_109670578_109670663_109671328_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157814	chr7	+	3012	16	FSM	ENSMUSG00000061079.15	ENSMUST00000084727.11	3003	16	0	-9	0	2	multi-exon	FALSE	canonical	3	81	junction_4	55.3423285861133	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTGTTTGTTTCATTAA	NA	False	NA	21	True	AATACA	-19	NA	109660916	109694603	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_109660983_109668690_109668810_109669684_109669778_109670578_109670663_109671325_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157823	chr7	-	179	1	Intergenic	novelGene_4848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTTTAATTGAAACCTC	3203	False	NA	NA	False	NA	NA	NA	109669035	109668856	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_109668900_109669000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157830	chr7	-	336	1	Intergenic	novelGene_4849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAGACTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	109707804	109707468	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_109707500_109707800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157835	chr7	+	3461	11	FSM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	-37	-5	-37	5	multi-exon	TRUE	canonical	3	352	junction_6	26.6084573021436	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATCTTCACGGTGCCTGT	NA	False	NA	31	True	ATTAAA	-28	NA	109721215	109742498	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157848	chr7	+	204	1	Intergenic	novelGene_4850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTATGCACGGGATTG	NA	False	NA	NA	False	NA	NA	NA	109766851	109767055	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_109766900_109767100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157858	chr7	+	189	1	Intergenic	novelGene_4851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTGTTCCTCAGCAAAA	7077	False	NA	NA	False	NA	NA	NA	109805752	109805941	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_109805800_109805900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157877	chr7	-	7092	40	FSM	ENSMUSG00000038371.16	ENSMUST00000164759.8	7090	40	0	-2	0	2	multi-exon	TRUE	canonical	3	82	junction_32	14.3447273642903	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGAGTGCTGTGATGTC	NA	False	NA	NA	False	ATTAAA	-22	NA	110214129	109907217	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159554_110213913
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157891	chr7	+	195	1	Intergenic	novelGene_4852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAACATAAGCAACAGAAACA	8645	False	NA	NA	False	NA	NA	NA	110142899	110143094	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_110142900_110143100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157896	chr7	+	181	1	Intergenic	novelGene_4853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATCTGTCCAGCTC	NA	False	NA	NA	False	AATAAA	-6	NA	110193474	110193655	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_110193500_110193700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157914	chr7	-	4021	6	FSM	ENSMUSG00000030788.17	ENSMUST00000177236.8	4032	6	11	0	-2	0	multi-exon	FALSE	canonical	3	107	junction_3	5.45527267879434	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGTAGGTGTTGGGAGTTT	NA	False	NA	0	True	ATTAAA	-22	NA	110443653	110412737	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_110416058_110420460_110420569_110424423_110424606_110432943_110433053_110436283_110436478_110443545
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157942	chr7	-	5216	22	FSM	ENSMUSG00000110424.2_ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	-38	2817	-38	1365	multi-exon	FALSE	canonical	3	4823	junction_9	518.544999107863	2696	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGCACATTGAAAACTGAGTA	NA	False	NA	-9	True	ATTAAA	-20	NA	110682275	110669773	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157951	chr7	-	4926	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	11	1203	intron_retention	FALSE	canonical	3	102	junction_19	1345.03087232227	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTTTTTTCTTCATTT	NA	False	NA	-5	True	AATAAA	-15	NA	110682213	110669935	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680713_110680841_110681991
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157952	chr7	-	4916	21	ISM	ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	-27	-1203	-14	1203	intron_retention	FALSE	canonical	3	1102	junction_8	1132.63140517999	300	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTTTTTTCTTCATTT	NA	False	NA	-5	True	AATAAA	-15	NA	110682251	110669935	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157960	chr7	-	3876	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	11	0	intron_retention	FALSE	canonical	3	4823	junction_8	530.346716780636	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682213	110671138	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157961	chr7	-	3784	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	0	intron_retention	FALSE	canonical	0	0	junction_10	1337.44149256397	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682212	110671138	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676060_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157963	chr7	-	3727	22	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	11	0	intron_retention	FALSE	canonical	3	147	junction_21	1306.04265608024	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682213	110671138	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680779_110681991
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157964	chr7	-	4090	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	0	intron_retention	FALSE	canonical	3	5035	junction_8	483.320108727125	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682212	110671138	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157965	chr7	-	3609	20	NIC	ENSMUSG00000005610.18	novel	3548	22	NA	NA	11	0	intron_retention	FALSE	canonical	3	102	junction_18	1690.34821930071	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682213	110671138	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680713_110680841_110681991
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157969	chr7	-	3765	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	11	0	intron_retention	FALSE	canonical	3	76	junction_10	1322.53667310237	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682213	110671138	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676040_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000157977	chr7	-	3628	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	11	0	intron_retention	FALSE	canonical	1	45	junction_9	1352.13643819697	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682213	110671138	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158007	chr7	+	191	1	Intergenic	novelGene_4854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAGAAGACAGAATTATAC	NA	False	NA	NA	False	NA	NA	NA	110693069	110693260	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_110693100_110693300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158010	chr7	-	198	1	Intergenic	novelGene_4855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGGAATAAGCCTTATATA	NA	False	NA	NA	False	TTTAAA	-3	NA	110706887	110706689	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_110706700_110706900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158013	chr7	-	174	1	Intergenic	novelGene_4856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	110726987	110726813	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_110726800_110727000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158024	chr7	+	5572	28	FSM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	-30	-2	-30	2	multi-exon	FALSE	canonical	3	255	junction_11	29.763171284045	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTATCTTAGTCATTAA	NA	False	NA	6	True	AATAAA	-18	NA	111622680	111710593	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158038	chr7	-	3270	7	ISM	ENSMUSG00000030772.7	ENSMUST00000033036.7	3359	8	631	5	631	-5	3prime_fragment	FALSE	canonical	3	37	junction_5	9.03234926989282	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTCCATGGTATGGGT	NA	False	NA	-6	True	AATAAA	-18	NA	111757633	111715228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr7_-_111717638_111718554_111718712_111719594_111719740_111720796_111720890_111748167_111748252_111749817_111749956_111757389
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158044	chr7	+	191	1	Intergenic	novelGene_4857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCTACCTTTTTTGTAAT	8940	False	NA	NA	False	NA	NA	NA	112092068	112092259	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_112092100_112092300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158055	chr7	+	191	1	Intergenic	novelGene_4858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCCAGAGGAACACAGTGG	4732	False	NA	NA	False	NA	NA	NA	112366371	112366562	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_112366400_112366600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158062	chr7	+	211	1	Intergenic	novelGene_4859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	607	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCAGGGAGCATGGCTAC	NA	False	NA	NA	False	NA	NA	NA	112442137	112442348	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_112442100_112442300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158081	chr7	-	198	1	Intergenic	novelGene_4860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGCTGGTTGGTTTAAAA	1578	False	NA	NA	False	NA	NA	NA	112686937	112686739	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_112686700_112686900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158091	chr7	+	2865	20	FSM	ENSMUSG00000055116.9	ENSMUST00000047321.9	2908	20	43	0	-18	0	multi-exon	FALSE	canonical	3	63	junction_10	14.0300429530047	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTGTTCCCAATTGATAA	3790	False	NA	NA	False	AATAAA	-20	NA	112806714	112913333	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_112806852_112833830_112833904_112873832_112873961_112878663_112878790_112879856_112880010_112882463_112882503_112882727_112882770_112884205_112884364_112886323_112886404_112890667_112890761_112892384_112892503_112894650_112894801_112898393_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158100	chr7	-	185	1	Intergenic	novelGene_4861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCAAAACTGGGGTACAC	NA	False	NA	NA	False	NA	NA	NA	112881324	112881139	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_112881100_112881300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158129	chr7	-	2427	10	NIC	ENSMUSG00000038187.15	novel	2581	11	NA	NA	-22	-1	combination_of_known_splicesites	FALSE	canonical	3	63	junction_7	47.410734836931	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGACCAACTTTATG	NA	False	NA	-17	True	AATAAA	-16	NA	112968568	112914850	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112964111_112964177_112968078_112968166_112968405
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158130	chr7	-	2362	9	FSM	ENSMUSG00000038187.15	ENSMUST00000119278.8	2394	9	31	1	-22	-1	multi-exon	FALSE	canonical	3	59	junction_7	50.6814500088543	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGACCAACTTTATG	NA	False	NA	-17	True	AATAAA	-16	NA	112968568	112914850	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112968078_112968166_112968405
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158142	chr7	+	4975	13	FSM	ENSMUSG00000030759.17	ENSMUST00000033018.15	4962	13	-14	1	-14	-1	multi-exon	FALSE	canonical	2	280	junction_11	48.5005727343044	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGATGTACTCCTTTGCA	NA	False	NA	13	True	AATAAA	-21	NA	113113026	113170717	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158156	chr7	+	4298	13	NIC	ENSMUSG00000030759.17	novel	4962	13	NA	NA	6	427	combination_of_known_junctions	FALSE	canonical	2	61	junction_2	108.378452142891	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTATTGTATTTTTACA	NA	False	NA	NA	False	AATAAA	-24	NA	113113074	113170092	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_113113145_113125194_113125246_113138483_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158164	chr7	-	2282	6	FSM	ENSMUSG00000055723.7	ENSMUST00000069449.7	2275	6	-7	0	-7	0	multi-exon	FALSE	canonical	3	204	junction_1	27.4779911929529	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACGCTTGACGGCTCCTTT	NA	False	NA	-1	True	ATTAAA	-21	NA	113717023	113646016	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_113647487_113649535_113649655_113657774_113657884_113658161_113658265_113659566_113659655_113716630
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158177	chr7	-	3382	22	FSM	ENSMUSG00000030754.10	ENSMUST00000033012.9	3346	22	-30	-6	-30	6	multi-exon	FALSE	canonical	3	435	junction_12	34.3731688854697	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGGATTTTTTTTTTT	NA	False	NA	-1	True	AATAAA	-22	NA	113853976	113814787	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_113815173_113815697_113815854_113816856_113816947_113818760_113818907_113820877_113820998_113822437_113822583_113825837_113826018_113826181_113826410_113831409_113831531_113832431_113832593_113834173_113834271_113836021_113836168_113836528_113836676_113836761_113836870_113837584_113837705_113839859_113839998_113844658_113844752_113845962_113846078_113848042_113848213_113849280_113849511_113853104_113853255_113853840
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158186	chr7	+	192	1	Intergenic	novelGene_4862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGTCTCGGCCAGTCAG	NA	False	NA	NA	False	NA	NA	NA	113855032	113855224	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_113855000_113855200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158191	chr7	-	1358	10	FSM	ENSMUSG00000030751.19	ENSMUST00000033008.10	1201	10	-5	-152	-5	152	multi-exon	TRUE	canonical	3	2548	junction_6	196.061655709387	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTATGTAGACTGGCT	NA	False	NA	NA	False	AATAAA	-17	NA	113875358	113863688	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158203	chr7	-	1138	10	NNC	ENSMUSG00000030751.19	novel	1201	10	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	3	170	junction_8	798.19900671511	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGTCAAGTTTTTGTT	NA	False	NA	-2	True	AATAAA	-15	NA	113875297	113863842	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873046_113873151_113873260_113873358_113873650_113873696_113875235
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158220	chr7	-	946	5	FSM	ENSMUSG00000030669.14	ENSMUST00000032906.11	994	5	48	0	-2	0	multi-exon	FALSE	canonical	3	77	junction_2	7.39932429347437	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGAGTCTTTGCTGTTACT	2082	False	NA	0	True	ATTAAA	-27	NA	114235544	114230712	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_114231141_114231650_114231835_114233702_114233844_114234361_114234457_114235446
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158227	chr7	+	202	1	Antisense	novelGene_ENSMUSG00000091900.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAGGACTCTGCAACAAT	NA	False	NA	NA	False	NA	NA	NA	115683221	115683423	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr7_+_115683200_115683400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158237	chr7	+	1480	5	FSM	ENSMUSG00000030663.13	ENSMUST00000032899.12	1479	5	0	-1	0	1	multi-exon	FALSE	canonical	3	1664	junction_2	78.2527954772224	371	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGTGATGCCTTTATC	NA	False	NA	30	True	AATAAA	-21	NA	115692535	115704446	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_115692761_115698674_115698759_115701178_115701240_115702445_115702556_115703446
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158246	chr7	-	5139	27	FSM	ENSMUSG00000045659.19	ENSMUST00000181998.8	5149	27	16	-6	-5	-2	multi-exon	FALSE	canonical	3	186	junction_4	26.6807778245958	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGCTCTTGCTGGCTGT	NA	False	NA	0	True	ATTAAA	-19	NA	115907595	115722721	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158261	chr7	-	4628	23	FSM	ENSMUSG00000045659.19	ENSMUST00000182487.8	3476	23	-10	-1142	-10	0	multi-exon	FALSE	canonical	3	231	junction_11	21.5147460482494	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGATTGGCGTGGTTCTTCC	NA	False	NA	0	True	AATAAA	-18	NA	115907600	115733025	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158274	chr7	-	207	1	Intergenic	novelGene_4863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCCCCCCCCCCACCCC	NA	False	NA	NA	False	AAAAAG	-11	NA	115900303	115900096	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_115900100_115900300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158281	chr7	+	192	1	Intergenic	novelGene_4864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGTGTCGTCCCCCCCCCC	NA	False	NA	NA	False	NA	NA	NA	115908342	115908534	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_115908300_115908500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158295	chr7	+	204	1	Intergenic	novelGene_4865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGAAATCCTGCAAGCCA	NA	False	NA	NA	False	NA	NA	NA	115926969	115927173	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_115927000_115927200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158297	chr7	-	584	6	FSM	ENSMUSG00000090862.4	ENSMUST00000170953.3	589	6	0	5	0	0	multi-exon	FALSE	canonical	3	42	junction_1	4075.24362952695	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTTTTGTGGTTCTT	NA	False	NA	-5	True	AATAAA	-15	NA	115933430	115930744	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_115930819_115931613_115931715_115932163_115932334_115932930_115933010_115933134_115933184_115933319
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158312	chr7	-	179	1	Intergenic	novelGene_4866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGATAAAGCCGGGCGTG	NA	False	NA	NA	False	NA	NA	NA	115978710	115978531	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_115978500_115978700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158321	chr7	+	199	1	Intergenic	novelGene_4867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTTCCTGCTGTCGGGGG	NA	False	NA	NA	False	NA	NA	NA	116171814	116172013	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_116171800_116172000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158329	chr7	-	199	1	Intergenic	novelGene_4868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTTTTAATTCATATACA	NA	False	NA	NA	False	TTTAAA	-8	NA	117280180	117279981	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_117280000_117280200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158339	chr7	-	520	5	FSM	ENSMUSG00000008683.17	ENSMUST00000131374.8	5179	5	-12	4671	-12	21	multi-exon	FALSE	canonical	3	7367	junction_4	1521.10568337641	320	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGCAGCAGAGTAGCTG	NA	False	NA	-12	True	AATAAA	-40	NA	117715423	117708265	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_117708417_117709155_117709242_117714007_117714088_117714331_117714470_117715358
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158348	chr7	-	2400	6	FSM	ENSMUSG00000030654.10	ENSMUST00000032888.10	2171	6	66	-295	-20	295	multi-exon	FALSE	canonical	3	2173	junction_1	168.469106960297	2037	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATCCTATGGCTTTGAA	NA	False	NA	-18	True	AGTAAA	-4	NA	117728819	117717818	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117726356_117726491_117728691
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158367	chr7	+	196	2	Antisense	novelGene_ENSMUSG00000030655.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	44	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATTTCTTGGTAAAGTA	NA	False	NA	NA	False	NA	NA	NA	117781226	117819884	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr7_+_117781391_117819852
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158375	chr7	+	197	1	Intergenic	novelGene_4869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATGGTGAATGGACATG	NA	False	NA	NA	False	NA	NA	NA	117825840	117826037	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_117825800_117826000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158381	chr7	+	178	1	Intergenic	novelGene_4870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAATTTTTAATTA	NA	False	NA	NA	False	NA	NA	NA	117834511	117834689	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_117834500_117834700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158393	chr7	+	195	1	Intergenic	novelGene_4871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	237	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCAAGGGTCAGCAAGAT	NA	False	NA	NA	False	NA	NA	NA	117839991	117840186	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_117840000_117840200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158400	chr7	-	886	6	FSM	ENSMUSG00000030652.12	ENSMUST00000032887.4	914	6	28	0	-14	0	multi-exon	FALSE	canonical	3	921	junction_3	42.5234053198941	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTGGTTTTCTTGTGCT	6653	False	NA	-2	True	AATAAA	-16	NA	118132551	118124284	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_118124518_118125046_118125116_118126559_118126700_118127526_118127642_118128781_118128961_118132401
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158417	chr7	-	4534	16	FSM	ENSMUSG00000042246.6	ENSMUST00000044195.6	4546	16	12	0	12	0	multi-exon	FALSE	canonical	3	106	junction_8	12.8571640211466	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTTGGGTGCGTGTTG	4156	False	NA	-2	True	AATAAA	-18	NA	118183947	118135063	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_118137441_118138637_118138717_118141108_118141265_118142521_118142653_118144824_118145012_118146539_118146638_118146826_118146945_118149157_118149316_118150358_118150533_118151920_118152069_118155045_118155192_118158078_118158162_118160213_118160382_118163439_118163589_118165407_118165649_118183826
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158421	chr7	-	1587	6	FSM	ENSMUSG00000033917.16	ENSMUST00000038791.15	1582	6	-5	0	-5	0	multi-exon	TRUE	canonical	3	428	junction_5	40.804901666344	184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTACTGATCTTCTGGT	NA	False	NA	3	True	AATAAA	-28	NA	118305006	118287767	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_118288374_118290805_118291018_118293715_118293809_118294258_118294365_118297777_118297954_118304612
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158434	chr7	+	185	1	Intergenic	novelGene_4872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAATTTTGAGCTGCACT	NA	False	NA	NA	False	NA	NA	NA	118302097	118302282	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_118302100_118302300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158441	chr7	+	4994	15	NIC	ENSMUSG00000033904.17	novel	5073	16	NA	NA	-7	0	combination_of_known_junctions	TRUE	canonical	3	41	junction_14	17.3487634094403	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTGGATCTCTTTTAG	NA	False	NA	10	True	AATAAA	-20	NA	118311767	118336247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_118311972_118313328_118313472_118314582_118314738_118317189_118317319_118320616_118322262_118323677_118323809_118324525_118324683_118325225_118325366_118325722_118325840_118328845_118328948_118329180_118329298_118329890_118329965_118330919_118330983_118331616_118331677_118334490
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158449	chr7	+	5072	16	FSM	ENSMUSG00000033904.17	ENSMUST00000106557.8	5073	16	1	0	1	0	multi-exon	FALSE	canonical	3	57	junction_14	14.3789970288458	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTGGATCTCTTTTAG	NA	False	NA	10	True	AATAAA	-20	NA	118311775	118336247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_118311972_118313328_118313472_118314582_118314738_118317189_118317319_118320616_118322262_118323677_118323809_118324525_118324683_118325225_118325366_118325722_118325840_118328845_118328948_118329180_118329298_118329890_118329965_118330919_118330983_118331616_118331677_118332109_118332196_118334490
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158456	chr7	+	3124	31	FSM	ENSMUSG00000030982.20	ENSMUST00000059390.13	5097	31	498	1475	-8	2	multi-exon	TRUE	canonical	3	302	junction_1	75.0223744403406	636	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGTCTCGGTGTGTGTT	NA	False	NA	12	True	ATTAAA	-23	NA	118339946	118440714	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158484	chr7	-	5078	5	FSM	ENSMUSG00000030980.18	ENSMUST00000116280.9	5382	5	309	-5	-5	5	multi-exon	FALSE	canonical	0	0	junction_3	263.543639650059	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTTTGAATGTGTG	NA	False	NA	-12	True	AATAAA	-21	NA	118454912	118441439	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158488	chr7	-	5025	5	NNC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	298.679175705304	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTTTGAATGTGTG	NA	False	NA	-12	True	AATAAA	-21	NA	118454907	118441439	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_-_118445318_118447719_118447798_118449843_118449913_118451625_118452564_118454845
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158499	chr7	-	4528	4	FSM	ENSMUSG00000008734.10	ENSMUST00000008878.10	4518	4	-5	-5	-5	5	multi-exon	FALSE	canonical	3	70	junction_1	4.64279609239471	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCGTGGTAGCTTGTCAG	NA	False	NA	2	True	AATAAA	-20	NA	118594439	118571264	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_118574427_118575735_118575894_118582837_118583869_118594262
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158513	chr7	-	3525	3	NIC	ENSMUSG00000030942.9	novel	2689	4	NA	NA	-14	0	intron_retention	FALSE	canonical	3	902	junction_1	12.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCATTCTTTTTTATT	NA	False	NA	-1	True	AATAAA	-20	NA	119320001	119314315	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_119316293_119317244_119318525_119319733
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158526	chr7	+	2183	2	NNC	ENSMUSG00000100153.3	novel	1437	2	NA	NA	-16	18	intron_retention	FALSE	canonical	3	208	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGAGCTTGGGAATGACA	NA	False	NA	NA	False	NA	NA	NA	119339132	119341467	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_+_119339946_119340097
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158528	chr7	+	1471	2	FSM	ENSMUSG00000100153.3	ENSMUST00000207161.2	1437	2	-16	-18	-16	18	multi-exon	FALSE	canonical	3	469	junction_1	0	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGAGCTTGGGAATGACA	NA	False	NA	NA	False	NA	NA	NA	119339132	119341467	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_119340294_119341157
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158535	chr7	+	2336	1	FSM	ENSMUSG00000100153.3	ENSMUST00000118909.2	972	1	-218	-1146	-16	19	mono-exon	FALSE	NA	NA	NA	NA	NA	962	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAGCTTGGGAATGACAC	NA	False	NA	NA	False	NA	NA	NA	119339132	119341468	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_119339100_119341500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158540	chr7	+	2229	2	NNC	ENSMUSG00000100153.3	novel	1437	2	NA	NA	-15	18	intron_retention	FALSE	canonical	3	37	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGAGCTTGGGAATGACA	NA	False	NA	NA	False	NA	NA	NA	119339133	119341467	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_+_119339769_119339873
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158556	chr7	+	200	1	Intergenic	novelGene_4873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATACCCTGCTCTTGAA	NA	False	NA	NA	False	NA	NA	NA	119345743	119345943	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_119345700_119345900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158589	chr7	+	191	1	Intergenic	novelGene_4874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAACAGTACCAGCTAGC	NA	False	NA	NA	False	NA	NA	NA	119705329	119705520	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_119705300_119705500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158595	chr7	+	176	1	Intergenic	novelGene_4875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAAAGCTTCTAT	NA	False	NA	NA	False	NA	NA	NA	120228111	120228287	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_120228100_120228300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158604	chr7	+	1875	14	FSM	ENSMUSG00000030884.13	ENSMUST00000033176.7	1896	14	27	-6	27	6	multi-exon	FALSE	canonical	3	1087	junction_9	72.1248916810278	607	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTCAGCTGGTTCCTTC	NA	False	NA	28	True	AGTAAA	-20	NA	120234425	120258753	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_120234546_120236884_120236969_120237070_120237221_120239456_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253203_120253285_120255323_120255401_120256739_120256894_120258243
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158626	chr7	+	4251	3	FSM	ENSMUSG00000046096.8	ENSMUST00000060175.8	4831	3	-8	588	3	-5	multi-exon	FALSE	canonical	3	80	junction_2	55.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGCTTCTATTACTTT	NA	False	NA	NA	False	AATAAA	-19	NA	120276845	120333489	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_120277094_120325342_120325556_120329699
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158642	chr7	+	3462	22	NNC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	-8	3	intron_retention	TRUE	canonical	0	0	junction_21	76.9953616413724	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCAGAATGTGGTATTT	NA	False	NA	NA	False	NA	NA	NA	120516958	120546658	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698_120545544_120546326
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158663	chr7	+	182	1	Intergenic	novelGene_4876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAACTGCCCTCCAAG	15	False	NA	NA	False	NA	NA	NA	120553082	120553264	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_120553100_120553300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158669	chr7	-	2543	5	FSM	ENSMUSG00000030878.12	ENSMUST00000033169.9	2525	5	-22	4	-22	-4	multi-exon	FALSE	canonical	3	32	junction_2	6.89202437604511	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGGGTCTACGTCTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	120581557	120556262	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_120558021_120559314_120559480_120559732_120559882_120569548_120569662_120581199
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158684	chr7	+	1695	5	NNC	ENSMUSG00000030876.8	novel	1823	5	NA	NA	125	0	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_4	108.278287297131	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCACCATGTTCTTCT	9552	False	NA	7	True	AATAAA	-16	NA	120633792	120676058	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_+_120634199_120647060_120647252_120651309_120651520_120656437_120656623_120675355
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158701	chr7	-	2911	17	FSM	ENSMUSG00000034951.11	ENSMUST00000057576.8	2902	17	-6	-3	-6	3	multi-exon	TRUE	canonical	3	174	junction_8	14.1585607937389	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGTTTCCTTCTTCTCTG	8918	False	NA	3	True	AATAAA	-20	NA	121580940	121522058	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_121522692_121524646_121524791_121528409_121528525_121529752_121529837_121534880_121535022_121536176_121536364_121540392_121540459_121543000_121543118_121548967_121549123_121550385_121550514_121555152_121555352_121562360_121562484_121563423_121563507_121570502_121570672_121576489_121576607_121576838_121576988_121580639
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158710	chr7	-	4904	17	FSM	ENSMUSG00000030872.15	ENSMUST00000033160.15	4915	17	11	0	11	0	multi-exon	FALSE	canonical	3	748	junction_16	35.03391214238	417	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTAGTGTCACTGTTTTG	NA	False	NA	-5	True	AATAAA	-14	NA	121620434	121585944	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121594225_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598207_121599341_121599424_121601297_121601436_121601889_121601971_121603109_121603211_121606479_121606604_121607553_121607653_121609905_121609982_121611371_121611457_121620211
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158719	chr7	+	200	1	Intergenic	novelGene_4877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGAAAGGGAAGGTCTAG	NA	False	NA	NA	False	NA	NA	NA	121624511	121624711	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_121624500_121624700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158722	chr7	+	182	1	Intergenic	novelGene_4878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAATCCATCCTTA	NA	False	NA	NA	False	NA	NA	NA	121625659	121625841	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_121625700_121625800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158743	chr7	+	4890	7	FSM	ENSMUSG00000030870.13	ENSMUST00000033158.6	4849	7	-36	-5	-36	5	multi-exon	FALSE	canonical	3	624	junction_1	33.5642005052341	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTTTCCTTCCGATTC	NA	False	NA	14	True	ATTAAA	-19	NA	121666361	121681422	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_121666708_121666886_121667217_121668003_121668213_121670924_121670991_121671132_121671239_121675330_121675414_121677672
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158757	chr7	+	199	1	Intergenic	novelGene_4879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	326	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAAGGTAGCCTTGTCCC	NA	False	NA	NA	False	NA	NA	NA	121683431	121683630	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_121683400_121683600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158774	chr7	-	642	5	FSM	ENSMUSG00000030869.12	ENSMUST00000123296.8	1416	5	0	774	0	1	multi-exon	FALSE	canonical	3	4604	junction_1	400.950978923858	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTCTCAATTAGTTTT	6393	False	NA	-10	True	AATAAA	-17	NA	121701074	121690052	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_121690187_121690808_121690909_121692839_121692928_121695831_121695955_121700877
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158778	chr7	-	744	5	NNC	ENSMUSG00000030869.12	novel	552	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	267	junction_1	2197.68361007676	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTTTCTCAATTAGTTT	6394	False	NA	-11	True	AATAAA	-16	NA	121701073	121690053	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_-_121690291_121690808_121690909_121692839_121692928_121695831_121695955_121700877
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158790	chr7	+	246	1	Antisense	novelGene_ENSMUSG00000030869.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTTAAAAATAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	121692531	121692777	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr7_+_121692500_121692800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158804	chr7	-	3756	13	FSM	ENSMUSG00000044702.14	ENSMUST00000098068.10	3750	13	-6	0	-6	0	multi-exon	FALSE	canonical	3	74	junction_9	28.0835806121655	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGGCTTGTTCTATTTT	NA	False	NA	0	True	AATAAA	-20	NA	121732175	121706484	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121724151_121726271_121727667_121728145_121728240_121728896_121728957_121731942
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158818	chr7	+	1534	6	FSM	ENSMUSG00000030868.7	ENSMUST00000033156.5	1532	6	-1	-1	-1	1	multi-exon	FALSE	canonical	3	258	junction_5	42.3008274150755	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTAGGCTCATTCATTA	NA	False	NA	15	True	AATAAA	-16	NA	121732262	121748268	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_121732405_121733391_121733461_121734274_121734394_121737470_121737583_121743007_121743111_121747279
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158826	chr7	+	179	1	Intergenic	novelGene_4880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACAAAACAACTTACTGT	572	False	NA	NA	False	NA	NA	NA	121739975	121740154	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_121740000_121740200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158833	chr7	+	2215	10	FSM	ENSMUSG00000030867.8	ENSMUST00000033154.8	2199	10	-6	-10	-6	10	multi-exon	FALSE	canonical	3	1108	junction_2	92.3724345606776	296	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTTTGGTCTTGTATT	NA	False	NA	66	True	ATTAAA	-24	NA	121758655	121769106	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_121759174_121759758_121759928_121760729_121760875_121761615_121761710_121763242_121763463_121766819_121766976_121767788_121767867_121768051_121768207_121768303_121768487_121768609
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158840	chr7	+	188	1	Intergenic	novelGene_4881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCCTTTCTCCCTGAAG	8226	False	NA	NA	False	NA	NA	NA	122450233	122450421	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_122450200_122450400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158844	chr7	+	178	1	Intergenic	novelGene_4882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGTGGGTTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	122535661	122535839	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_122535700_122535800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158849	chr7	+	6752	17	FSM	ENSMUSG00000030779.17	ENSMUST00000071590.6	5728	17	-1024	0	-670	0	multi-exon	TRUE	canonical	3	56	junction_15	18.1597726789186	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTTGCAAATGTATATTA	6896	False	NA	15	True	AATAAA	-21	NA	122569116	122601780	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_122570351_122575158_122575259_122577798_122577836_122582185_122582231_122584215_122584305_122584423_122584524_122584882_122585023_122587824_122587998_122589052_122589157_122589267_122589606_122591191_122591289_122591446_122591526_122591622_122591678_122593892_122593962_122596165_122596529_122597747_122599503_122599806
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158864	chr7	+	193	1	FSM	ENSMUSG00000108551.2	ENSMUST00000206967.2	584	1	391	0	391	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATTTCCAAACTTATAAA	NA	False	NA	NA	False	NA	NA	NA	122594961	122595154	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_122595000_122595200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158869	chr7	+	197	1	Intergenic	novelGene_4883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATCTGTGTAGTTTGCC	NA	False	NA	NA	False	NA	NA	NA	122653254	122653451	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_122653300_122653500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158876	chr7	+	181	1	Intergenic	novelGene_4884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGACAGAGGGAGACACC	NA	False	NA	NA	False	NA	NA	NA	122797213	122797394	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_122797200_122797400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158894	chr7	-	3440	21	NIC	ENSMUSG00000030766.16	novel	3336	20	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	48.4230317101274	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTAATTCTTAGAGGCA	NA	False	NA	-1	True	ATTAAA	-25	NA	122969164	122878493	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158902	chr7	-	3350	20	FSM	ENSMUSG00000030766.16	ENSMUST00000106442.9	3336	20	-14	0	3	0	multi-exon	FALSE	canonical	0	0	junction_19	53.0955862029814	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTAATTCTTAGAGGCA	NA	False	NA	-1	True	ATTAAA	-25	NA	122969123	122878493	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_122879340_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158926	chr7	-	985	8	FSM	ENSMUSG00000030750.14	ENSMUST00000033006.14	1120	8	132	3	-65	-3	multi-exon	FALSE	canonical	3	553	junction_7	177.832872698624	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGGCTTGTGTGAGGTTG	NA	False	NA	-14	True	AGTAAA	-30	NA	125090636	125066814	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_125067016_125067450_125067572_125068200_125068318_125070284_125070432_125071046_125071125_125071279_125071402_125085509_125085657_125090584
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158941	chr7	-	210	1	Intergenic	novelGene_4885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGATAGGAAGCAATAGAA	NA	False	NA	NA	False	AATAAA	-27	NA	125216632	125216422	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_125216400_125216600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158945	chr7	-	6923	37	FSM	ENSMUSG00000032777.10	ENSMUST00000055506.9	6961	37	38	0	0	0	multi-exon	FALSE	canonical	3	171	junction_34	23.9112782676933	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGTGTATTGGCCTAATG	NA	False	NA	1	True	ATTAAA	-16	NA	125306914	125240125	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_125240906_125241618_125241812_125242497_125242538_125243045_125243545_125244686_125244977_125245645_125245906_125246511_125246800_125247568_125247742_125250234_125250329_125251034_125251098_125253638_125253752_125255015_125255098_125256657_125256801_125258228_125258387_125261430_125261620_125261748_125261828_125262130_125262267_125262579_125262719_125266195_125266374_125266483_125266581_125267165_125267264_125268025_125268172_125268320_125268591_125268754_125268940_125269646_125269751_125271856_125272011_125273228_125273366_125275654_125275858_125276472_125276789_125277997_125278114_125280273_125280436_125292310_125292435_125295632_125295730_125298120_125298265_125298515_125298693_125303002_125303213_125306628
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158962	chr7	+	192	1	Intergenic	novelGene_4886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGGAGCTGTGTGTGCCT	NA	False	NA	NA	False	NA	NA	NA	125675862	125676054	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_125675900_125676100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158964	chr7	-	4573	24	FSM	ENSMUSG00000000131.16	ENSMUST00000168189.8	4552	24	-19	-2	-19	2	multi-exon	TRUE	canonical	3	436	junction_21	38.8223134638356	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGGGGCATCTTTGTAC	NA	False	NA	NA	False	AATAAA	-30	NA	125799692	125700884	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158973	chr7	-	4511	25	NIC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-7	-2	combination_of_known_junctions	FALSE	canonical	3	9	junction_18	144.586743475634	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTGATGGGGCATCTT	NA	False	NA	NA	False	AATAAA	-25	NA	125799601	125700889	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125748675_125748710_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000158993	chr7	+	215	1	Intergenic	novelGene_4887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTATCTTCTAGTAGGTT	6876	False	NA	NA	False	ATTAAA	-15	NA	125760609	125760824	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_125760600_125760800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159002	chr7	+	4248	4	FSM	ENSMUSG00000042978.12	ENSMUST00000056028.11	4109	4	-138	-1	-138	1	multi-exon	FALSE	canonical	3	196	junction_2	13.4412301024373	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGAGCTGCAGGGTGGA	NA	False	NA	20	True	AATAAA	-17	NA	125871652	125894189	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_125872272_125889028_125889262_125890214_125890418_125890996
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159013	chr7	-	186	1	Intergenic	novelGene_4888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	125915557	125915371	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_125915400_125915600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159016	chr7	+	166	1	Intergenic	novelGene_4889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGAGTGAGTGACTGG	NA	False	NA	NA	False	NA	NA	NA	125920959	125921125	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_125921000_125921100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159018	chr7	+	188	1	Intergenic	novelGene_4890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGTGGTAAAATGCACAAA	NA	False	NA	NA	False	NA	NA	NA	125948377	125948565	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_125948400_125948600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159026	chr7	-	2219	12	FSM	ENSMUSG00000030741.16	ENSMUST00000032994.15	2219	12	0	0	0	0	multi-exon	TRUE	canonical	3	348	junction_9	48.6508899292612	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACTGCTTGTCTCTCTGT	NA	False	NA	1	True	AATAAA	-21	NA	125976622	125969231	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125975845_125975912_125976008
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159037	chr7	-	2039	11	NIC	ENSMUSG00000030741.16	novel	2152	13	NA	NA	-8	0	intron_retention	FALSE	canonical	3	13	junction_8	135.864785724631	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGACTGCTTGTC	NA	False	NA	-6	True	AATAAA	-14	NA	125976601	125969238	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125974238_125974376_125975845_125975912_125976008
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159040	chr7	-	3178	11	NIC	ENSMUSG00000030741.16	novel	2152	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	376	junction_6	42.5305772356783	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGACTGCTTGTC	NA	False	NA	-6	True	AATAAA	-14	NA	125976595	125969238	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125974376_125975845_125975912_125976008
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159053	chr7	-	3392	8	FSM	ENSMUSG00000030722.8	ENSMUST00000075671.5	3388	8	-3	-1	-3	1	multi-exon	FALSE	canonical	3	215	junction_7	21.1920277655614	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGGTTTCTGTCTTTG	NA	False	NA	-5	True	AATAAA	-21	NA	125995912	125982024	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_125984312_125986573_125986684_125986783_125986929_125989557_125989745_125989834_125989916_125990442_125990567_125995113_125995187_125995527
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159063	chr7	-	133	1	Intergenic	novelGene_4891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTGATCTGTCTCCCC	NA	False	NA	NA	False	AATAAA	-10	NA	126019903	126019770	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_126019800_126019900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159065	chr7	+	206	1	Intergenic	novelGene_4892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTCTTTCTGGGCAATC	NA	False	NA	NA	False	NA	NA	NA	126021677	126021883	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_126021700_126021900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159072	chr7	-	169	1	Intergenic	novelGene_4893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTGAAGAAGAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	126022990	126022821	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_126022800_126023000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159084	chr7	-	3029	10	NIC	ENSMUSG00000030733.11	novel	3393	10	NA	NA	-10	1	combination_of_known_junctions	FALSE	canonical	3	53	junction_2	75.3988571154828	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGGCTGATATTTGG	8194	False	NA	0	True	AATAAA	-29	NA	126074285	126066164	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_126066946_126067121_126067222_126067591_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074167
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159089	chr7	-	2976	10	NIC	ENSMUSG00000030733.11	novel	3089	11	NA	NA	-10	1	combination_of_known_junctions	FALSE	canonical	3	197	junction_2	41.0918873973506	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGGCTGATATTTGG	8194	False	NA	0	True	AATAAA	-29	NA	126074285	126066164	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074167
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159114	chr7	+	271	1	Intergenic	novelGene_4894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACACAAAAGGGCAAATGG	NA	False	NA	NA	False	NA	NA	NA	126076350	126076621	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_126076400_126076600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159148	chr7	-	3866	23	NIC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	232.057278658767	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	9383	False	NA	0	True	NA	NA	NA	126102640	126090879	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_126091388_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159155	chr7	-	3604	24	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	143	junction_23	266.578786716817	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	7243	False	NA	0	True	NA	NA	NA	126101271	126090879	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_126091388_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159157	chr7	-	3409	23	NIC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	241.997545407946	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	6935	False	NA	0	True	NA	NA	NA	126101579	126090879	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_126091388_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159158	chr7	-	2007	9	NIC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	-1893	0	intron_retention	FALSE	canonical	3	263	junction_1	251.886848356559	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	NA	False	NA	0	True	NA	NA	NA	126094441	126090879	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_126091388_126091620_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159181	chr7	-	4012	22	NIC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	238	junction_21	181.885750689423	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	6928	False	NA	0	True	NA	NA	NA	126101586	126090879	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159192	chr7	-	4466	22	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-35	0	intron_retention	FALSE	canonical	3	324	junction_21	166.887513543916	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	9379	False	NA	0	True	NA	NA	NA	126102644	126090879	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159242	chr7	-	3407	21	FSM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	-24	0	-24	0	multi-exon	FALSE	canonical	3	1924	junction_14	277.99846672239	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGGAGTTTCTAAAGGT	NA	False	NA	NA	False	NA	NA	NA	126165607	126145626	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159251	chr7	-	3020	20	ISM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	35	456	-18	-456	intron_retention	FALSE	canonical	3	1924	junction_14	261.383841247645	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGTTGCTTGTTGTCTGC	NA	False	NA	-8	True	ATTAAA	-18	NA	126165548	126146082	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159257	chr7	-	1696	15	FSM	ENSMUSG00000030720.17	ENSMUST00000032962.11	2386	15	4	686	4	0	multi-exon	FALSE	canonical	3	116	junction_11	19.7815880173912	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126182415	126171257	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159267	chr7	-	700	3	FSM	ENSMUSG00000030717.10	ENSMUST00000032961.4	829	3	135	-6	-66	6	multi-exon	FALSE	canonical	3	3716	junction_2	16	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGTGTGTTGTGTGCCTTT	NA	False	NA	-2	True	AATAAA	-22	NA	126224713	126222414	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_126222752_126224061_126224206_126224494
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159278	chr7	+	205	1	Intergenic	novelGene_4895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAACAAATAATCCTCCT	NA	False	NA	NA	False	NA	NA	NA	126243768	126243973	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_126243800_126244000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159286	chr7	+	1167	10	FSM	ENSMUSG00000030714.15	ENSMUST00000032956.10	1312	10	-1	146	-1	0	multi-exon	FALSE	canonical	3	419	junction_3	31.8433666561813	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCTCCTGGGCCTCAC	110	False	NA	33	True	AATAAA	-16	NA	126248479	126271951	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_126248650_126260223_126260321_126263100_126263177_126264087_126264161_126269801_126269867_126270709_126270840_126270905_126271053_126271209_126271246_126271327_126271491_126271741
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159294	chr7	-	1951	6	FSM	ENSMUSG00000059772.13	ENSMUST00000144897.2	3152	6	1	1200	1	10	multi-exon	FALSE	canonical	3	82	junction_4	7.98498591107085	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTAGCCGGGCGTGGTGG	4988	False	NA	NA	False	ATTAAA	-8	NA	126294955	126289839	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_126290828_126290910_126290996_126291099_126291228_126291492_126291832_126291924_126291977_126294596
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159306	chr7	+	193	1	Intergenic	novelGene_4896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATAGTAACCCTAA	165	False	NA	21	True	NA	NA	NA	126293989	126294182	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_126294000_126294200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159323	chr7	+	205	1	Intergenic	novelGene_4897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATATTAATCCTACCTATC	1495	False	NA	NA	False	NA	NA	NA	126325467	126325672	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_126325500_126325700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159331	chr7	-	187	1	Intergenic	novelGene_4898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTATTAGTTTTAGTTTT	6368	False	NA	NA	False	NA	NA	NA	126349593	126349406	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_126349400_126349600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159348	chr7	+	961	5	FSM	ENSMUSG00000042675.16	ENSMUST00000038614.12	973	5	12	0	-8	0	multi-exon	FALSE	canonical	3	187	junction_2	12.73528562695	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTGGCTCACATGGAAT	8233	False	NA	17	True	AATAAA	-18	NA	126376138	126379686	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_126376276_126376942_126377126_126377225_126377270_126377477_126377587_126379198
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159357	chr7	-	1440	8	FSM	ENSMUSG00000030697.8	ENSMUST00000206570.2	1400	8	-34	-6	-34	4	multi-exon	FALSE	canonical	3	2424	junction_1	142.291307979548	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGTCAGGTTTGATTG	5192	False	NA	NA	False	AATAAA	-19	NA	126391546	126385033	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388248_126391232
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159383	chr7	-	119	1	ISM	ENSMUSG00000030695.17	ENSMUST00000032934.12	1511	9	3902	0	2399	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTCATGTCTTGT	2214	False	NA	-3	True	AATAAA	-18	NA	126394524	126394405	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr7_-_126394400_126394500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159387	chr7	-	1595	10	FSM	ENSMUSG00000030695.17	ENSMUST00000087566.11	1549	10	-44	-2	-15	0	multi-exon	FALSE	canonical	3	862	junction_9	8041.23258932084	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTCATGTCTTGT	NA	False	NA	-3	True	AATAAA	-18	NA	126398357	126394405	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126397145_126397299_126398216
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159389	chr7	-	1537	8	NIC	ENSMUSG00000030695.17	novel	1511	9	NA	NA	-15	0	intron_retention	FALSE	canonical	3	19253	junction_4	590.139658323799	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTCATGTCTTGT	NA	False	NA	-3	True	AATAAA	-18	NA	126398357	126394405	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396949_126398216
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159396	chr7	-	1607	10	NNC	ENSMUSG00000030695.17	novel	1549	10	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	8266.83240126575	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTCATGTCTTGT	NA	False	NA	-3	True	AATAAA	-18	NA	126398357	126394405	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126397133_126397299_126398216
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159404	chr7	-	1347	9	NIC	ENSMUSG00000030695.17	novel	1511	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	287	junction_8	6630.75357708308	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTCATGTCTTGT	NA	False	NA	-3	True	AATAAA	-18	NA	126399219	126394405	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126399173
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159405	chr7	-	1394	10	NIC	ENSMUSG00000030695.17	novel	1460	9	NA	NA	-79	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_9	8373.29644512988	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTCATGTCTTGT	NA	False	NA	-3	True	AATAAA	-18	NA	126399698	126394405	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126399459_126399531_126399676
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159446	chr7	-	2255	8	NIC	ENSMUSG00000030689.16	novel	1973	7	NA	NA	4	-2	intron_retention	FALSE	canonical	3	76	junction_7	292.908775936141	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTTGTGCTTGGATTT	9921	False	NA	-1	True	ATTAAA	-29	NA	126461545	126450753	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_126452164_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876_126461190_126461445
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159466	chr7	+	2537	7	FSM	ENSMUSG00000042606.10	ENSMUST00000037248.10	2766	7	-19	248	-19	211	multi-exon	FALSE	canonical	3	171	junction_2	39.0498257216199	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTCCCAAACCGTCATGC	1457	False	NA	53	True	AATAAA	-27	NA	126461124	126464301	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_126461689_126461771_126461893_126461989_126462099_126462340_126463423_126463491_126463658_126463734_126463834_126463905
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159484	chr7	-	4710	19	FSM	ENSMUSG00000059981.13	ENSMUST00000071268.11	4720	19	11	-1	11	1	multi-exon	TRUE	canonical	3	55	junction_2	21.6270292703766	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGGATGTCTCCCTTTT	8444	False	NA	-4	True	AATAAA	-21	NA	126483864	126464848	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_126466088_126466168_126466352_126467281_126467495_126470573_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159491	chr7	-	4979	16	FSM	ENSMUSG00000059981.13	ENSMUST00000117394.2	4985	16	8	-2	8	2	multi-exon	FALSE	canonical	3	97	junction_14	9.03228776236797	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGCCCAGGCTGCCTC	8441	False	NA	NA	False	NA	NA	NA	126483867	126468672	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159513	chr7	+	1883	6	FSM	ENSMUSG00000030682.5	ENSMUST00000032920.5	1974	6	430	-339	-34	0	multi-exon	FALSE	canonical	3	352	junction_2	28.9344085821708	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTCTCAGAGCATGGT	NA	False	NA	24	True	NA	NA	NA	126575515	126579673	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_126575979_126576089_126576225_126577433_126577588_126578086_126578169_126578493_126578576_126578706
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159516	chr7	-	2819	15	FSM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	18	0	18	0	multi-exon	FALSE	canonical	3	72	junction_9	19.4401226165613	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTTTTCCCTCTTAT	NA	False	NA	0	True	AATAAA	-21	NA	126613775	126586031	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_126586287_126586648_126586838_126587489_126587617_126587997_126588115_126588717_126589105_126591446_126591645_126591725_126591971_126592691_126592974_126594907_126595145_126595409_126595505_126597397_126597530_126597644_126597769_126600651_126600848_126600980_126601131_126613690
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159569	chr7	-	2207	4	ISM	ENSMUSG00000030678.8	ENSMUST00000032916.6	2347	5	217	-4	217	0	intron_retention	FALSE	canonical	3	463	junction_1	152.057737572133	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGAGTTCCTAAGTTAT	547	False	NA	-27	True	AATAAA	-18	NA	126625407	126621301	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr7_-_126622341_126623615_126623788_126624047_126624112_126624475
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159573	chr7	-	2432	5	ISM	ENSMUSG00000030678.8	ENSMUST00000205568.2	2650	6	291	0	217	0	intron_retention	FALSE	canonical	0	0	junction_1	321.496014749794	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGAGTTCCTAAGTTAT	547	False	NA	-27	True	AATAAA	-18	NA	126625407	126621301	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr7_-_126622341_126622653_126622879_126623615_126623788_126624047_126624112_126624475
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159610	chr7	-	2122	14	FSM	ENSMUSG00000030677.9	ENSMUST00000032915.8	2115	14	0	-7	0	5	multi-exon	FALSE	canonical	3	689	junction_8	49.8885147636753	262	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTTTTGAGGATGAC	7925	False	NA	1	True	AATACA	-20	NA	126641643	126626895	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_126627013_126627102_126627163_126627241_126627455_126628086_126628149_126628506_126628673_126630100_126630270_126631800_126631937_126632053_126632208_126632333_126632565_126632640_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126641515
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159627	chr7	-	178	1	Intergenic	novelGene_4899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAACATTTAATGT	NA	False	NA	NA	False	NA	NA	NA	126661945	126661767	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_126661800_126661900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159630	chr7	+	212	1	Intergenic	novelGene_4900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAGGCAATGGAAAATAAG	NA	False	NA	NA	False	NA	NA	NA	126682668	126682880	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_126682700_126682900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159640	chr7	+	1880	2	FSM	ENSMUSG00000045165.7	ENSMUST00000056288.7	1932	2	52	0	-13	0	multi-exon	FALSE	canonical	3	90	junction_1	0	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTTGTATGACCTCTG	NA	False	NA	6	True	NA	NA	NA	126690582	126693158	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_126690645_126691340
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159650	chr7	-	1217	4	FSM	ENSMUSG00000030674.6	ENSMUST00000032912.6	2050	4	177	656	-8	-656	multi-exon	FALSE	canonical	3	73	junction_2	9.46337971105226	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAATGAGTGGTTGGTAAA	NA	False	NA	1	True	NA	NA	NA	126721221	126706941	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_126707414_126707505_126707638_126707880_126708417_126721144
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159661	chr7	-	2871	7	NIC	ENSMUSG00000042502.11	novel	2906	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_6	198.070413966571	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGTGGTAATTTAATAAA	5520	False	NA	-1	True	NA	NA	NA	126795110	126791196	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795086
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159662	chr7	-	2999	7	NIC	ENSMUSG00000042502.11	novel	2906	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_6	200.670058110876	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGTGGTAATTTAATAAA	5520	False	NA	-1	True	NA	NA	NA	126795110	126791196	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126794958
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159665	chr7	-	3324	6	ISM	ENSMUSG00000042502.11	ENSMUST00000206026.2	2906	7	0	29	0	0	intron_retention	FALSE	canonical	3	578	junction_3	18.2274518241031	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGTGGTAATTTAATAAA	5520	False	NA	-1	True	NA	NA	NA	126795110	126791196	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159668	chr7	-	2983	7	FSM	ENSMUSG00000042502.11	ENSMUST00000166791.8	3284	7	-64	365	-14	0	multi-exon	FALSE	canonical	3	356	junction_6	93.763295353542	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGTGGTAATTTAATAAA	5394	False	NA	-1	True	NA	NA	NA	126795236	126791196	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159694	chr7	-	3657	9	FSM	ENSMUSG00000042492.13	ENSMUST00000120705.3	3614	9	-145	102	-145	-102	multi-exon	FALSE	canonical	3	338	junction_3	35.2311563108564	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACGTCTCTGTTTTCTGA	1397	False	NA	0	True	NA	NA	NA	126807785	126796732	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_126798385_126798469_126798625_126798904_126799095_126799266_126799333_126799456_126799572_126802343_126802451_126802545_126802654_126802912_126803013_126806621
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159718	chr7	+	575	5	ISM	ENSMUSG00000030672.13	ENSMUST00000032910.13	766	7	1489	10	-17	0	3prime_fragment	FALSE	canonical	3	1768	junction_4	19.9311314279947	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCAATTTCAGTGTG	4449	False	NA	32	True	AATAAA	-24	NA	126812268	126813460	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr7_+_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159727	chr7	-	1472	11	FSM	ENSMUSG00000000486.14	ENSMUST00000106314.8	1486	11	34	-20	7	5	multi-exon	FALSE	canonical	3	221	junction_10	48.9043965303734	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCGGAGTCTTCTTCCC	NA	False	NA	-2	True	AATAAA	-23	NA	126817636	126813613	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_126814017_126814120_126814212_126814452_126814619_126814830_126814928_126815039_126815142_126815861_126815980_126816072_126816208_126816790_126816915_126817142_126817230_126817312_126817404_126817578
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159737	chr7	+	191	1	Intergenic	novelGene_4901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGGAAGTGATTAAATTT	6814	False	NA	NA	False	NA	NA	NA	126820821	126821012	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_126820800_126821000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159766	chr7	-	689	3	FSM	ENSMUSG00000042462.5	ENSMUST00000035276.5	676	3	-11	-2	-11	2	multi-exon	FALSE	canonical	3	3852	junction_1	65	443	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGATTTTTCTTGAGTAG	2479	False	NA	1	True	AATAAA	-20	NA	126859892	126856128	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_126856509_126858529_126858641_126859694
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159787	chr7	-	194	1	Intergenic	novelGene_4902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAACATAATAAAAC	NA	False	NA	NA	False	NA	NA	NA	126886739	126886545	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_126886500_126886700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159809	chr7	+	216	1	Genic_Genomic	ENSMUSG00000108483.2	novel	NA	NA	NA	NA	4798	43	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCACCATTAGAGCTGGG	NA	False	NA	NA	False	NA	NA	NA	127038391	127038607	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr7_+_127038400_127038600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159823	chr7	-	1999	3	FSM	ENSMUSG00000048921.12	ENSMUST00000053392.11	3621	3	6	1616	6	3	multi-exon	FALSE	canonical	3	47	junction_1	4.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTCTTAAAATAATATGG	4363	False	NA	0	True	ATTAAA	-15	NA	127048324	127042923	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_127044310_127047534_127047649_127047825
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159831	chr7	+	211	1	Intergenic	novelGene_4903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAGAGAGAGAGAGAGA	1243	False	NA	NA	False	NA	NA	NA	127052960	127053171	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_127053000_127053200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159835	chr7	+	207	1	Intergenic	novelGene_4904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAAACATTAGGCCTTG	6126	False	NA	NA	False	NA	NA	NA	127057843	127058050	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_127057800_127058000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159836	chr7	-	209	1	Intergenic	novelGene_4905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGCTGGCTTACAGGTT	NA	False	NA	NA	False	TTTAAA	-5	NA	127058600	127058391	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_127058400_127058600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159842	chr7	+	241	1	Intergenic	novelGene_4906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGAAGGAAGCAGGCGCT	NA	False	NA	NA	False	NA	NA	NA	127062484	127062725	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_127062500_127062700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159846	chr7	+	207	1	Intergenic	novelGene_4907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGTCTTGGTTTCATTCC	NA	False	NA	NA	False	NA	NA	NA	127066093	127066300	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_127066100_127066300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159869	chr7	+	201	1	Intergenic	novelGene_4908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTGAGGATCCCACGTA	3670	False	NA	NA	False	NA	NA	NA	127087502	127087703	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_127087500_127087700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159876	chr7	+	237	1	Intergenic	novelGene_4909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTATCAAAGCTGGCTTGT	NA	False	NA	NA	False	NA	NA	NA	127107780	127108017	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_127107800_127108000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159912	chr7	+	4127	20	NNC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	-9	11	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_5	86.3204427500525	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGTCTAACCTGAGTC	NA	False	NA	32	True	AATAAA	-33	NA	127187929	127202777	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190453_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159921	chr7	+	4096	20	NNC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	-3	4	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_5	88.6841012024939	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGTCCATTTGGTCTAAC	NA	False	NA	25	True	AATAAA	-26	NA	127187935	127202770	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190471_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159935	chr7	+	199	1	Intergenic	novelGene_4910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGAAAGAGTGGTC	NA	False	NA	NA	False	NA	NA	NA	127257690	127257889	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_127257700_127257900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159945	chr7	-	1000	6	FSM	ENSMUSG00000030814.18	ENSMUST00000061468.9	1132	6	132	0	-16	0	multi-exon	FALSE	canonical	3	471	junction_4	29.8971570554794	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCATGTCATTTCC	NA	False	NA	NA	False	AATAAA	-14	NA	127307973	127304149	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_127304348_127304898_127304985_127306347_127306510_127306604_127306714_127307051_127307131_127307607
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159954	chr7	+	186	1	Antisense	novelGene_ENSMUSG00000060034.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGTTTTTTCAAGACG	NA	False	NA	NA	False	NA	NA	NA	127317731	127317917	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr7_+_127317700_127317900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159964	chr7	+	202	1	Intergenic	novelGene_4911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTAGGTTCCCTCAGGAGG	NA	False	NA	NA	False	NA	NA	NA	127362182	127362384	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_127362200_127362400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159984	chr7	+	178	1	Intergenic	novelGene_4912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	127393685	127393863	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_127393700_127393900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000159998	chr7	-	257	1	Intergenic	novelGene_4913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTAAAATTAGGGGCTA	NA	False	NA	NA	False	AATAAA	-11	NA	127428111	127427854	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_127427900_127428100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160004	chr7	-	185	1	Intergenic	novelGene_4914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGATAAAAGGCTGGAAATT	9939	False	NA	NA	False	NA	NA	NA	127439198	127439013	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_127439000_127439200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160012	chr7	+	1430	11	FSM	ENSMUSG00000030805.15	ENSMUST00000033075.14	1456	11	19	7	19	-7	multi-exon	FALSE	canonical	3	172	junction_3	24.7872951327893	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGAGCCAGCTGTGCAG	NA	False	NA	NA	False	NA	NA	NA	127440954	127448184	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559_127447671_127447740_127447840_127447922
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160064	chr7	+	1531	11	FSM	ENSMUSG00000030801.11	ENSMUST00000033070.9	1579	11	0	48	0	-48	multi-exon	FALSE	canonical	3	295	junction_2	15.0053323855222	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGTATTCTTCATTTCA	NA	False	NA	44	True	AGTAAA	-45	NA	127511687	127524961	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_127511915_127514399_127514475_127514550_127514727_127519407_127519462_127519593_127519759_127521330_127521421_127523549_127523691_127523775_127523870_127523967_127524119_127524280_127524436_127524758
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160079	chr7	+	201	1	Intergenic	novelGene_4915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAGCCAAGGAGGTTGG	NA	False	NA	NA	False	NA	NA	NA	127554749	127554950	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_127554700_127555000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160083	chr7	-	190	1	Intergenic	novelGene_4916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAGATATTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	127565342	127565152	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_127565200_127565300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160086	chr7	+	1843	15	FSM	ENSMUSG00000030795.19	ENSMUST00000106251.10	5536	15	24	3669	-9	0	multi-exon	FALSE	canonical	3	619	junction_3	208.17746550205	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTCCCCCAGTTTAC	1174	False	NA	37	True	ATTAAA	-20	NA	127566652	127581204	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_127566750_127568733_127568759_127568888_127569044_127571009_127571155_127571288_127571477_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160089	chr7	+	1834	15	FSM	ENSMUSG00000030795.19	ENSMUST00000077609.12	1831	15	-3	0	-3	0	multi-exon	FALSE	canonical	3	245	junction_3	273.376618440941	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTCCCCCAGTTTAC	1180	False	NA	37	True	ATTAAA	-20	NA	127566658	127581204	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_127566750_127568733_127568759_127568888_127569044_127571012_127571155_127571288_127571477_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160111	chr7	+	199	1	Intergenic	novelGene_4917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCGTGGTGGCGCACT	4965	False	NA	NA	False	NA	NA	NA	127570443	127570642	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_127570400_127570600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160115	chr7	+	245	1	NIC	ENSMUSG00000030795.19	novel	5536	15	NA	NA	-1291	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTCCCCCAGTTTAC	7091	False	NA	37	True	ATTAAA	-20	NA	127580959	127581204	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_127581000_127581200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160122	chr7	-	1296	3	FSM	ENSMUSG00000030793.5	ENSMUST00000033056.5	3800	3	112	2392	112	-460	multi-exon	FALSE	canonical	3	1219	junction_2	45	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCCAAGCCTTTTTTT	NA	False	NA	-8	True	NA	NA	NA	127592927	127591271	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_127592138_127592286_127592344_127592554
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160144	chr7	-	2618	13	FSM	ENSMUSG00000030780.16	ENSMUST00000033044.16	2627	13	26	-17	26	17	multi-exon	FALSE	canonical	3	141	junction_4	13.6897670623799	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTCTGGCCTCTGTGGGC	1132	False	NA	1	True	AGTAAA	-33	NA	127897316	127870533	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_127871788_127872643_127872722_127872822_127872967_127873804_127873876_127875257_127875316_127875399_127875585_127875666_127875738_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127896961
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160166	chr7	-	1882	12	FSM	ENSMUSG00000030846.16	ENSMUST00000033135.9	1580	12	-302	0	-5	0	multi-exon	FALSE	canonical	3	163	junction_7	29.2730095977351	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTATAAATTTTGAT	NA	False	NA	NA	False	AATAAA	-15	NA	128063381	128044003	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160170	chr7	+	223	1	Intergenic	novelGene_4918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCGTGGTGGCACATG	7384	False	NA	NA	False	NA	NA	NA	128091290	128091513	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_128091300_128091500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160179	chr7	+	2596	4	FSM	ENSMUSG00000030847.9	ENSMUST00000033136.9	2562	4	-34	0	-34	0	multi-exon	FALSE	canonical	3	128	junction_2	8.2192186706253	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTTGTGGTTTCTAA	7108	False	NA	17	True	AATAAA	-22	NA	128125305	128148705	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_128125769_128141696_128142036_128143530_128143933_128147313
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160191	chr7	+	194	1	Intergenic	novelGene_4919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAAGGATGGATGCTAGG	2882	False	NA	NA	False	NA	NA	NA	128191438	128191632	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_128191400_128191600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160200	chr7	+	4583	20	FSM	ENSMUSG00000042105.19	ENSMUST00000043138.13	4734	20	0	151	0	0	multi-exon	TRUE	canonical	3	45	junction_6	8.64088073894081	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGCGTATGAGAATTTC	7176	False	NA	15	True	ATTAAA	-21	NA	128213083	128297998	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_128213416_128237881_128237963_128260739_128260877_128265361_128265491_128265700_128265869_128265972_128266030_128269320_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278452_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295899
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160208	chr7	+	187	1	Intergenic	novelGene_4920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGCAGACATAAGATAGCC	NA	False	NA	NA	False	NA	NA	NA	128285737	128285924	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_128285700_128285900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160213	chr7	+	4305	20	NNC	ENSMUSG00000055319.9	novel	4505	19	NA	NA	-8	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_19	34.6985434804919	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTGTCTCTCCCTGTTTC	1923	False	NA	23	True	AATAAA	-35	NA	128346658	128386560	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_+_128346903_128351782_128352310_128354429_128354641_128355773_128355968_128357039_128357130_128359486_128359608_128363139_128363230_128364113_128364256_128365664_128365874_128367107_128367227_128367849_128368003_128369290_128369387_128373888_128374087_128378494_128378651_128379007_128379111_128380152_128380339_128380786_128380950_128381359_128381462_128385151_128385885_128386092
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160228	chr7	+	189	1	Intergenic	novelGene_4921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATTCAGAGAACGTTGT	NA	False	NA	NA	False	NA	NA	NA	129711858	129712047	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_129711900_129712000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160232	chr7	-	231	1	Intergenic	novelGene_4922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATCACACCTATCCCAGG	NA	False	NA	NA	False	NA	NA	NA	129781975	129781744	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_129781700_129782000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160252	chr7	-	4704	12	FSM	ENSMUSG00000030850.18	ENSMUST00000035458.15	4685	12	-19	0	-19	0	multi-exon	FALSE	canonical	3	144	junction_5	43.8843333177548	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCGGCCGTGGTTCT	NA	False	NA	-15	True	AATAAA	-16	NA	130121279	129993222	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130105451_130105581_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160260	chr7	-	1465	11	FSM	ENSMUSG00000040331.17	ENSMUST00000160289.9	1435	11	-27	-3	-27	3	multi-exon	FALSE	canonical	3	1333	junction_1	62.2636330453018	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGATCGTTTTTATTGTCT	NA	False	NA	-4	True	ATTAAA	-25	NA	130149138	130134252	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_130134423_130135306_130135397_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130140841_130141543_130141696_130144409_130144541_130147624_130147703_130148721
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160271	chr7	-	183	1	Intergenic	novelGene_4923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATCTAAAACTCTGTCC	NA	False	NA	NA	False	NA	NA	NA	130153261	130153078	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_130153100_130153300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160308	chr7	+	221	1	Intergenic	novelGene_4924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCAGTACTTGGTGAGG	NA	False	NA	NA	False	NA	NA	NA	130404426	130404647	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_130404400_130404600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160318	chr7	+	207	1	Intergenic	novelGene_4925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAGTCAAAGGAGAGCCA	NA	False	NA	NA	False	NA	NA	NA	130450692	130450899	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_130450700_130450900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160327	chr7	+	3549	13	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	-12	-4	combination_of_known_junctions	FALSE	canonical	3	137	junction_12	38.4154012806785	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACGTCCCCTTTTATTTG	NA	False	NA	19	True	AATAAA	-21	NA	130467602	130515038	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160336	chr7	+	3550	13	FSM	ENSMUSG00000040268.18	ENSMUST00000075181.11	2301	13	-9	-1240	2	-4	multi-exon	FALSE	canonical	3	88	junction_1	52.7225441975884	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACGTCCCCTTTTATTTG	NA	False	NA	19	True	AATAAA	-21	NA	130467618	130515038	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160340	chr7	+	3562	13	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	3	-4	combination_of_known_junctions	FALSE	canonical	3	18	junction_12	65.7594522145338	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACGTCCCCTTTTATTTG	NA	False	NA	19	True	AATAAA	-21	NA	130467619	130515038	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511389_130512561
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160353	chr7	+	2060	9	FSM	ENSMUSG00000006205.14	ENSMUST00000006367.8	2041	9	-21	2	-21	-2	multi-exon	FALSE	canonical	3	73	junction_3	16.015617378047	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGGCGTGCTTCTTTT	6601	False	NA	17	True	ATTAAA	-18	NA	130537911	130587388	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_130538474_130563242_130563343_130563702_130563908_130581030_130581226_130581681_130581715_130583386_130583502_130583966_130584025_130585389_130585486_130586692
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160383	chr7	-	4430	4	FSM	ENSMUSG00000040167.17	ENSMUST00000046306.15	4430	4	3	-3	3	3	multi-exon	TRUE	canonical	3	63	junction_1	6.97614984548545	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTTTTTTTTTTAAAC	NA	False	NA	1	True	AATAAA	-20	NA	131012247	130990377	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_130994310_130995483_130995667_130998397_130998581_131012115
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160390	chr7	+	3325	11	FSM	ENSMUSG00000030861.16	ENSMUST00000015829.15	6081	11	21	2735	21	0	multi-exon	FALSE	canonical	3	100	junction_4	19.6022957839127	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATTCTCCCTTTTTATG	NA	False	NA	21	True	AATAAA	-25	NA	131012350	131047938	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_131012517_131026200_131026361_131027503_131027605_131030157_131030365_131031675_131031847_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045965
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160405	chr7	+	2075	8	FSM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	149	-6	-9	3	multi-exon	FALSE	canonical	3	1325	junction_6	52.1422700554033	186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGTGTTACCTTGGTAT	NA	False	NA	14	True	ATTAAA	-23	NA	131162099	131173627	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_131162184_131162438_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160414	chr7	+	179	1	Intergenic	novelGene_4926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATTTTAAAAAAAACACAAA	NA	False	NA	3	True	NA	NA	NA	132143559	132143738	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_132143600_132143700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160425	chr7	-	2155	10	FSM	ENSMUSG00000030934.10	ENSMUST00000084500.8	2152	10	0	-3	0	3	multi-exon	FALSE	canonical	3	402	junction_6	42.9636653837854	244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTGAATCTATTTACTT	NA	False	NA	-2	True	AATAAA	-27	NA	132178127	132159203	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_132160060_132161374_132161520_132162480_132162595_132163512_132163642_132164315_132164439_132165935_132166064_132168497_132168594_132168794_132169020_132171634_132171870_132178023
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160436	chr7	+	209	1	Intergenic	novelGene_4927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTTCCAAATGAAGACT	NA	False	NA	NA	False	NA	NA	NA	132189694	132189903	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_132189700_132189900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160444	chr7	-	3257	2	FSM	ENSMUSG00000048528.8	ENSMUST00000054562.4	3264	2	8	-1	8	1	multi-exon	FALSE	canonical	3	59	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGACGAATTATTCATC	NA	False	NA	NA	False	AATAAA	-18	NA	132201358	132196605	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_132199546_132201041
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160451	chr7	+	1611	7	FSM	ENSMUSG00000030946.14	ENSMUST00000033241.6	1612	7	1	0	1	0	multi-exon	FALSE	canonical	3	290	junction_6	19.9979165581484	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGACTCAGCCTTTCTTA	NA	False	NA	12	True	AATAAA	-20	NA	132212368	132308149	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_132212560_132232210_132232399_132235729_132235884_132243252_132243317_132244215_132244309_132251986_132252079_132307320
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160481	chr7	-	1065	6	FSM	ENSMUSG00000030960.17	ENSMUST00000033257.15	1107	6	42	0	8	0	multi-exon	FALSE	canonical	3	236	junction_3	60.7651215747982	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTGGTTTTTGTGC	NA	False	NA	NA	False	AGTAAA	-18	NA	132454360	132429185	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_132429612_132433088_132433306_132438828_132438937_132452323_132452439_132453154_132453221_132454227
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160492	chr7	-	222	1	Intergenic	novelGene_4928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGTTCCCTACATCAG	NA	False	NA	NA	False	NA	NA	NA	132460190	132459968	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_132460000_132460200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160499	chr7	+	2884	9	FSM	ENSMUSG00000030965.20	ENSMUST00000084497.12	2892	9	13	-5	1	5	multi-exon	FALSE	canonical	3	195	junction_8	19.6273883896967	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTAGTGTCTGTCTTAG	NA	False	NA	21	True	AATAAA	-23	NA	132460966	132486845	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_132461063_132466691_132466783_132470761_132470799_132473300_132473368_132476555_132476747_132478326_132478447_132480257_132480343_132482495_132482611_132484763
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160550	chr7	+	4382	24	FSM	ENSMUSG00000039990.17	ENSMUST00000128901.9	4380	24	0	-2	0	2	multi-exon	FALSE	canonical	3	27	junction_6	37.3605535837356	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTAGTTCCCACTTGC	NA	False	NA	8	True	AATAAA	-21	NA	133239421	133273910	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273094
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160554	chr7	+	4482	25	NIC	ENSMUSG00000039990.17	novel	5424	25	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	29	junction_24	36.1270664537761	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTAGTTCCCACTTGCA	NA	False	NA	9	True	AATAAA	-22	NA	133239421	133273911	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133248718_133248821_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273097
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160557	chr7	+	5274	25	FSM	ENSMUSG00000039990.17	ENSMUST00000051169.13	5424	25	150	0	0	0	multi-exon	FALSE	canonical	3	128	junction_10	22.9037463577953	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGTAATTACTTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	133239421	133274700	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133248718_133248821_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273094
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160571	chr7	+	1259	7	FSM	ENSMUSG00000030983.5	ENSMUST00000033282.5	1244	7	-13	-2	-13	2	multi-exon	FALSE	canonical	3	1578	junction_1	47.9215214931895	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAAGTGTTCATGTCCAG	1294	False	NA	25	True	AATAAA	-26	NA	133311048	133322876	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_133311258_133315916_133315992_133316627_133316709_133318589_133318680_133319327_133319516_133320832_133321008_133322435
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160578	chr7	+	3762	5	NIC	ENSMUSG00000030983.5	novel	1244	7	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	1578	junction_1	42.4698422412893	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACTTGAAGTGTTCATG	1315	False	NA	20	True	AATAAA	-21	NA	133311069	133322871	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_133311258_133315916_133315992_133316627_133319516_133320832_133321008_133322435
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160585	chr7	-	2978	12	FSM	ENSMUSG00000030986.14	ENSMUST00000033290.12	2955	12	-14	-9	-14	9	multi-exon	FALSE	canonical	3	247	junction_11	48.5725154403017	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTTTCTTGGTAATTACA	NA	False	NA	0	True	AATAAA	-28	NA	133378546	133322661	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133378330
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160616	chr7	+	206	1	Intergenic	novelGene_4929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGTATGGTTCTAACTG	NA	False	NA	NA	False	NA	NA	NA	133371599	133371805	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_133371600_133371800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160620	chr7	+	6821	52	FSM	ENSMUSG00000058325.7	ENSMUST00000084488.5	6807	52	-6	-8	-6	8	multi-exon	FALSE	canonical	3	98	junction_42	17.5348283073368	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGTGGCTGGCCTCTT	NA	False	NA	10	True	AATAAA	-17	NA	134272409	134775376	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948_134478045_134592250_134592353_134600952_134601048_134678863_134678943_134683546_134683648_134693102_134693162_134700461_134700611_134710163_134710250_134710434_134710592_134715576_134715618_134717018_134717110_134720636_134720757_134734717_134734808_134735587_134735693_134739543_134739686_134739806_134739886_134742035_134742121_134745484_134745572_134747142_134747320_134748168_134748253_134753937_134754076_134760189_134760336_134765006_134765206_134768828_134768983_134770091_134770244_134774175
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160648	chr7	+	209	1	Intergenic	novelGene_4930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGAATCACATTCCTAAC	7713	False	NA	NA	False	TTTAAA	-10	NA	135404059	135404268	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_135404100_135404300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160663	chr7	-	184	1	Intergenic	novelGene_4931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAAATAAATCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	136953064	136952880	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_136952900_136953100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160667	chr7	-	1125	4	FSM	ENSMUSG00000040139.15	ENSMUST00000068996.13	1126	4	6	-5	0	5	multi-exon	FALSE	canonical	3	160	junction_1	38.0292285252044	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCTTGGTGTGTTGT	NA	False	NA	-2	True	ATTAAA	-19	NA	137012485	136977297	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_136978081_136989099_136989163_136989268_136989431_137012368
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160692	chr7	+	1321	12	NIC	ENSMUSG00000031068.9	novel	1685	11	NA	NA	4	-407	combination_of_known_junctions	FALSE	canonical	3	26	junction_3	1404.19735021368	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGCGTGTAGAATGTCT	NA	False	NA	34	True	AATAAA	-22	NA	137039388	137069916	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_137039501_137046707_137046817_137054181_137054271_137054425_137054501_137055141_137055344_137060851_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160697	chr7	+	194	1	Intergenic	novelGene_4932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATACTAAATAGCACTTGT	NA	False	NA	NA	False	NA	NA	NA	137040951	137041145	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_137041000_137041100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160707	chr7	-	202	1	Intergenic	novelGene_4933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGGAGACCAGGAACAT	NA	False	NA	NA	False	NA	NA	NA	138423836	138423634	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_138423600_138423800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160726	chr7	+	2100	9	FSM	ENSMUSG00000041769.14	ENSMUST00000041097.13	2081	9	-19	0	-19	0	multi-exon	FALSE	canonical	3	482	junction_4	89.4111814875522	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGCAGTCTTTATTT	NA	False	NA	20	True	AATAAA	-34	NA	138448068	138484786	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_138448245_138448340_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160751	chr7	+	1774	7	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_2	229.285423774726	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGCAGTCTTTATTT	NA	False	NA	20	True	AATAAA	-34	NA	138448324	138484786	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_138448434_138470138_138470237_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160758	chr7	-	1628	6	FSM	ENSMUSG00000078566.9	ENSMUST00000106112.2	1756	6	0	128	0	-128	multi-exon	FALSE	canonical	3	289	junction_2	24.8628236529965	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTTATATTTACATAA	NA	False	NA	-24	True	AATAAA	-19	NA	138511235	138492692	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_138493690_138496108_138496259_138496338_138496446_138499724_138499807_138500409_138500558_138511091
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160766	chr7	-	199	1	Intergenic	novelGene_4934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGATAACCTTTTT	NA	False	NA	NA	False	NA	NA	NA	138507470	138507271	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_138507300_138507500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160773	chr7	+	2593	3	FSM	ENSMUSG00000060260.14	ENSMUST00000172136.9	2543	3	-24	-26	-19	26	multi-exon	FALSE	canonical	3	21	junction_2	19.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTCTGCTCCTTTGTCT	NA	False	NA	NA	False	AAAAAG	-21	NA	138828378	138847103	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_138828560_138834685_138836382_138846387
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160782	chr7	+	190	1	Intergenic	novelGene_4935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTGGGTATCTTCAAAA	NA	False	NA	NA	False	NA	NA	NA	138959100	138959290	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_138959100_138959300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160798	chr7	+	227	1	Intergenic	novelGene_4936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGAAGATGTTTCTGTCT	8481	False	NA	NA	False	NA	NA	NA	139078997	139079224	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_139079000_139079200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160804	chr7	-	1290	3	FSM	ENSMUSG00000041309.18	ENSMUST00000106095.3	1299	3	-12	21	-5	-21	multi-exon	FALSE	canonical	3	81	junction_2	2	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTCGGAGCCGTGGCTCC	NA	False	NA	-29	True	AATAAA	-15	NA	139162718	139161156	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_139161605_139161796_139161970_139162049
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160817	chr7	+	1254	2	FSM	ENSMUSG00000047751.10	ENSMUST00000168457.3	1227	2	-27	0	-27	0	multi-exon	FALSE	canonical	3	805	junction_1	0	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTGAATGAATTCGGAC	NA	False	NA	NA	False	AATAAA	-20	NA	139523674	139525025	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_139524343_139524439
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160832	chr7	-	3079	18	FSM	ENSMUSG00000025474.10	ENSMUST00000026547.9	2960	18	-78	-41	-12	0	multi-exon	FALSE	canonical	3	147	junction_17	73.93539684464	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGCTCAATGATTTC	NA	False	NA	NA	False	NA	NA	NA	139616257	139575867	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616008
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160837	chr7	-	2874	18	FSM	ENSMUSG00000025474.10	ENSMUST00000211638.2	3060	18	279	-93	0	0	multi-exon	FALSE	canonical	3	194	junction_17	64.0289186395126	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGCTCAATGATTTC	NA	False	NA	NA	False	NA	NA	NA	139616303	139575867	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616259
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160850	chr7	+	1082	6	FSM	ENSMUSG00000025470.12	ENSMUST00000168194.3	1076	6	-2	-4	-2	4	multi-exon	FALSE	canonical	3	304	junction_1	28.032837887021	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTCTTCTTCATGTGTT	NA	False	NA	23	True	AATAAA	-20	NA	139616322	139620519	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_139616520_139616732_139616807_139617132_139617335_139617428_139617554_139619238_139619359_139620155
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160863	chr7	+	187	1	Intergenic	novelGene_4937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGGTTTCCATGATCAG	NA	False	NA	NA	False	NA	NA	NA	139632549	139632736	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_139632500_139632700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160874	chr7	-	639	6	FSM	ENSMUSG00000025466.20	ENSMUST00000026539.14	685	6	46	0	8	0	multi-exon	FALSE	canonical	3	247	junction_5	86.8506764510214	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTTGTGGTGAGTTCC	1517	False	NA	0	True	NA	NA	NA	139682308	139679382	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_139679620_139679791_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139682219
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160877	chr7	-	721	6	NIC	ENSMUSG00000025466.20	novel	685	6	NA	NA	-10	-7	combination_of_known_junctions	FALSE	canonical	3	140	junction_5	128.971934931597	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTCATGAACTTGTCTTG	1936	False	NA	-11	True	NA	NA	NA	139681889	139679393	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_139679620_139679791_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139681707
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160901	chr7	+	1763	7	FSM	ENSMUSG00000025464.16	ENSMUST00000026537.13	4655	7	3	2889	3	1	multi-exon	FALSE	canonical	3	213	junction_2	25.7552583627758	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTAGAGTACTTCTC	NA	False	NA	23	True	CATAAA	-15	NA	139705572	139714248	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_139705796_139706238_139706729_139707420_139707621_139708930_139709184_139711559_139711673_139712293_139712452_139713922
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160910	chr7	-	1472	13	FSM	ENSMUSG00000025480.6	ENSMUST00000026553.6	1460	13	-12	0	-12	0	multi-exon	FALSE	canonical	3	141	junction_11	16.7779617355625	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTATATTGTGTGTG	NA	False	NA	0	True	AATAAA	-18	NA	140367777	140357141	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_140357646_140357829_140357912_140358047_140358159_140358221_140358346_140358422_140358490_140358977_140359042_140359249_140359340_140359506_140359562_140359795_140359844_140360369_140360445_140360787_140360848_140361939_140362003_140367648
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160922	chr7	-	3897	3	FSM	ENSMUSG00000060314.14	ENSMUST00000106052.2	3851	3	-46	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	4	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCACATTGGAGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	140402091	140389601	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_140393228_140398500_140398628_140401947
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160939	chr7	-	1446	4	FSM	ENSMUSG00000025484.10	ENSMUST00000026557.10	2268	4	807	15	15	-15	multi-exon	FALSE	canonical	3	105	junction_2	2.62466929133727	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGAAGTTCCGTGCCCG	NA	False	NA	-25	True	CATAAA	-16	NA	140436215	140433321	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_140434537_140434677_140434735_140434986_140435079_140436133
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160953	chr7	+	2647	9	NIC	ENSMUSG00000025485.14	novel	3406	10	NA	NA	-3	0	intron_retention	FALSE	canonical	3	213	junction_1	24.9446261747896	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTTTAACATTCATGAT	NA	False	NA	9	True	ATTAAA	-16	NA	140437331	140443056	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160958	chr7	-	1392	7	FSM	ENSMUSG00000025486.18	ENSMUST00000106048.10	1416	7	29	-5	-13	1	multi-exon	FALSE	canonical	3	125	junction_6	42.0135560133737	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGTCTCTTTGGGATA	NA	False	NA	-9	True	AATAAA	-19	NA	140461753	140443577	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_140443997_140444887_140445098_140449401_140449564_140456266_140456368_140457562_140457796_140457869_140458059_140461675
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000160989	chr7	-	199	1	Intergenic	novelGene_4938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCATGGTGAGGTCAC	2980	False	NA	NA	False	TTTAAA	-3	NA	140504449	140504250	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_140504200_140504400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161009	chr7	-	670	2	FSM	ENSMUSG00000060591.10	ENSMUST00000081649.10	655	2	-8	-7	-8	7	multi-exon	FALSE	canonical	3	9574	junction_1	0	456	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACTGTTCTCTGGTTCTG	NA	False	NA	-5	True	AATAAA	-29	NA	140535908	140534742	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_140535087_140535582
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161016	chr7	+	682	2	FSM	ENSMUSG00000025491.15	ENSMUST00000026564.9	736	2	57	-3	57	3	multi-exon	FALSE	canonical	3	1139	junction_1	0	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTCCTGTGTTGAGTTCG	NA	False	NA	27	True	AATAAA	-31	NA	140548009	140549741	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_140548352_140549401
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161030	chr7	-	675	2	FSM	ENSMUSG00000025492.7	ENSMUST00000026565.7	678	2	0	3	0	-3	multi-exon	FALSE	canonical	3	1854	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATGACTGCTTTTATTC	NA	False	NA	-1	True	AATAAA	-20	NA	140590683	140589501	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_140589803_140590309
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161044	chr7	+	3701	20	FSM	ENSMUSG00000055629.6	ENSMUST00000048002.7	3556	20	-145	0	-145	0	multi-exon	FALSE	canonical	3	132	junction_14	21.3235203654468	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTTCTGTGAGTGTTC	NA	False	NA	24	True	AATGAA	-25	NA	140640871	140652313	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648675_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161069	chr7	-	1797	10	NIC	ENSMUSG00000025494.9	novel	1990	10	NA	NA	-127	0	combination_of_known_splicesites	TRUE	canonical	3	90	junction_9	19.9616917069288	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	-30	True	AATAAA	-17	NA	140676779	140671087	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140676532
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161090	chr7	-	3266	22	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-4	1	intron_retention	FALSE	canonical	3	95	junction_6	23.6339238865797	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGCCTCATGATGTAG	NA	False	NA	-20	True	AATAAA	-16	NA	140697723	140681136	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161094	chr7	-	3020	24	FSM	ENSMUSG00000054662.9	ENSMUST00000067836.9	3019	24	-14	13	-14	0	multi-exon	FALSE	canonical	3	82	junction_10	30.0592986723404	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAGCCTCATGATGTA	NA	False	NA	-21	True	AATAAA	-15	NA	140697733	140681137	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161100	chr7	+	222	1	Intergenic	novelGene_4939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAACAAACAAACTCCCAAG	NA	False	NA	NA	False	NA	NA	NA	140701812	140702034	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_140701800_140702000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161120	chr7	+	2083	12	NNC	ENSMUSG00000025495.16	novel	408	3	NA	NA	2040	556	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	84.6823915463925	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGGCTGCCCTTTGCC	NA	False	NA	15	True	AATAAA	-20	NA	140714505	140736071	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_+_140714645_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161131	chr7	-	231	1	Intergenic	novelGene_4940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTTTTAACCAGGATTTA	NA	False	NA	NA	False	NA	NA	NA	140737758	140737527	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_140737500_140737800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161135	chr7	-	1662	10	FSM	ENSMUSG00000038650.16	ENSMUST00000167493.9	1656	10	0	-6	0	4	multi-exon	FALSE	canonical	3	317	junction_9	147.871899850621	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCCTTGTCGTTCTTTGTG	7992	False	NA	NA	False	ATTAAA	-20	NA	140752770	140740234	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140752654
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161140	chr7	-	1658	10	FSM	ENSMUSG00000038650.16	ENSMUST00000210314.2	1658	10	4	-4	4	4	multi-exon	FALSE	canonical	3	224	junction_9	176.376561249007	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCCTTGTCGTTCTTTGTG	NA	False	NA	NA	False	ATTAAA	-20	NA	140748598	140740234	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140748486
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161148	chr7	-	1627	10	FSM	ENSMUSG00000038650.16	ENSMUST00000106033.5	2091	10	470	-6	-67	4	multi-exon	FALSE	canonical	3	441	junction_9	110.454616120026	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCCTTGTCGTTCTTTGTG	NA	False	NA	NA	False	ATTAAA	-20	NA	140748669	140740234	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140748588
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161161	chr7	-	1078	6	FSM	ENSMUSG00000025499.19	ENSMUST00000026572.11	2828	6	-71	1821	-26	0	multi-exon	FALSE	canonical	3	237	junction_1	141.994366085419	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTGGCTGGAAGTA	NA	False	NA	-2	True	AGTAAA	-18	NA	140773944	140770838	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_140771108_140771254_140771381_140772043_140772204_140772354_140772534_140772742_140772895_140773752
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161171	chr7	-	1294	6	FSM	ENSMUSG00000025499.19	ENSMUST00000168550.8	2272	6	-14	992	-13	0	multi-exon	FALSE	canonical	3	72	junction_2	252.24797323269	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTGGCTGGAAGTA	NA	False	NA	-2	True	AGTAAA	-18	NA	140773931	140770838	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_140771381_140771867_140771950_140772043_140772204_140772354_140772534_140772742_140772895_140773752
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161172	chr7	-	1212	5	FSM	ENSMUSG00000025499.19	ENSMUST00000097957.11	1199	5	-13	0	-13	0	multi-exon	FALSE	canonical	3	437	junction_1	76.3392919799496	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTGGCTGGAAGTA	NA	False	NA	-2	True	AGTAAA	-18	NA	140773931	140770838	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_140771381_140772043_140772204_140772354_140772534_140772742_140772895_140773752
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161190	chr7	+	1546	6	FSM	ENSMUSG00000038618.13	ENSMUST00000046890.12	1525	6	-20	-1	-20	1	multi-exon	TRUE	canonical	3	288	junction_1	23.1395764870492	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGTGTCCTGAGGTTG	NA	False	NA	21	True	AATAAA	-18	NA	140795752	140798572	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_140795854_140796633_140796765_140796912_140797626_140797798_140797931_140798002_140798082_140798182
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161199	chr7	+	1584	5	FSM	ENSMUSG00000038618.13	ENSMUST00000209500.2	1560	5	-21	-3	-2	0	multi-exon	FALSE	canonical	3	288	junction_1	22.576259654779	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	20	True	AATAAA	-17	NA	140795785	140798571	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_140795854_140796633_140796765_140796912_140797626_140797798_140798082_140798182
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161206	chr7	+	5388	18	FSM	ENSMUSG00000038611.18	ENSMUST00000106027.9	5248	18	-15	-125	-10	1	multi-exon	FALSE	canonical	3	178	junction_2	28.6346754247049	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGGACTGATGCTTAGA	NA	False	NA	85	True	NA	NA	NA	140808686	140842664	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161231	chr7	+	179	1	Intergenic	novelGene_4941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTATGTCTGATGAGCCC	133	False	NA	NA	False	NA	NA	NA	140835062	140835241	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_140835100_140835200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161245	chr7	+	194	1	Intergenic	novelGene_4942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAACCCTTAATATCAAAT	2406	False	NA	NA	False	NA	NA	NA	140859828	140860022	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_140859800_140860000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161255	chr7	-	5471	12	NIC	ENSMUSG00000058886.10	novel	2135	12	NA	NA	-483	-2	intron_retention	FALSE	canonical	0	0	junction_11	32.0206544912746	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAATGTTGTCAAGCCAT	NA	False	NA	-4	True	AATAAA	-27	NA	140908086	140877094	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_140877530_140881512_140881603_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140904354
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161258	chr7	-	2648	12	FSM	ENSMUSG00000058886.10	ENSMUST00000080553.9	2135	12	-515	2	-497	-2	multi-exon	FALSE	canonical	0	0	junction_11	32.0206544912746	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAATGTTGTCAAGCCAT	NA	False	NA	-4	True	AATAAA	-27	NA	140908100	140877094	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_140877530_140881512_140881603_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140907191
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161266	chr7	+	187	1	ISM	ENSMUSG00000025505.17	ENSMUST00000134221.2	749	2	90	2213	90	607	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGAGCGCCAGGCCCAT	6587	False	NA	NA	False	NA	NA	NA	140913660	140913847	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr7_+_140913700_140913800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161277	chr7	+	3101	21	FSM	ENSMUSG00000025504.15	ENSMUST00000026577.13	3191	21	90	0	-10	0	multi-exon	TRUE	canonical	3	69	junction_6	10.2434125173206	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGATATCTGTTTCTTGG	NA	False	NA	7	True	AATAAA	-19	NA	140918882	140942933	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_140918972_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937230_140937455_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161285	chr7	+	212	1	Intergenic	novelGene_4943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTGGGGCTAGAGAGAT	7421	False	NA	NA	False	TTTAAA	-10	NA	140928361	140928573	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_140928400_140928600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161290	chr7	+	174	1	Intergenic	novelGene_4944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGTGTTTAAACAA	NA	False	NA	NA	False	NA	NA	NA	140932083	140932257	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_140932100_140932300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161292	chr7	+	211	1	Intergenic	novelGene_4945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACGGTAGGCACACACTA	NA	False	NA	NA	False	NA	NA	NA	140936636	140936847	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_140936600_140936800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161304	chr7	+	1273	8	FSM	ENSMUSG00000025503.6	ENSMUST00000026576.5	1229	8	-41	-3	-41	3	multi-exon	FALSE	canonical	3	3267	junction_3	222.11993450864	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCATTTCACCGTCTTT	3799	False	NA	21	True	ATTAAA	-20	NA	140972070	140982884	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_140972232_140975961_140976086_140978407_140978516_140980200_140980333_140981493_140981670_140981784_140981983_140982096_140982243_140982656
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161315	chr7	+	201	1	ISM	ENSMUSG00000025503.6	ENSMUST00000026576.5	1229	8	10569	0	2614	0	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTTCATTTCACCGTC	6282	False	NA	18	True	ATTAAA	-17	NA	140982680	140982881	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr7_+_140982700_140982900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161322	chr7	+	172	1	Intergenic	novelGene_4946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGTATAAATAAAAATTGGG	7412	False	NA	NA	False	NA	NA	NA	140983810	140983982	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_140983800_140984000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161329	chr7	-	1472	8	FSM	ENSMUSG00000051007.16	ENSMUST00000106008.3	1898	8	37	389	-9	1	multi-exon	FALSE	canonical	3	140	junction_4	16.4564980032391	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTGTTTGTTTT	5474	False	NA	0	True	NA	NA	NA	140994012	140988095	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_140988878_140989001_140989114_140989243_140989338_140989758_140989854_140990690_140990799_140990898_140991005_140991710_140991788_140993914
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161371	chr7	+	508	5	FSM	ENSMUSG00000025508.14	ENSMUST00000084434.11	964	5	221	235	-40	0	multi-exon	FALSE	canonical	3	11307	junction_1	1806.73116428538	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCCTTTAAACATTTTGT	2338	False	NA	27	True	AATAAA	-20	NA	141027503	141031263	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_141027621_141027820_141027945_141028638_141028688_141030916_141031016_141031144
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161385	chr7	+	459	5	NNC	ENSMUSG00000025508.14	novel	964	5	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	625	junction_4	5897.4512503284	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCCTTTAAACATTTTGT	2384	False	NA	27	True	AATAAA	-20	NA	141027549	141031263	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_+_141027621_141027820_141027945_141028638_141028688_141030916_141031016_141031147
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161411	chr7	+	1895	8	FSM	ENSMUSG00000025510.15	ENSMUST00000106000.10	1865	8	-22	-8	-21	8	multi-exon	FALSE	canonical	3	98	junction_1	68.1968938187848	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTTGCTGACAGGACCT	NA	False	NA	16	True	NA	NA	NA	141047283	141051394	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_141047498_141048331_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161441	chr7	+	1681	7	FSM	ENSMUSG00000025511.16	ENSMUST00000239217.2	1157	7	-50	-474	-50	0	multi-exon	FALSE	canonical	3	206	junction_2	25.1241362482817	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGAAGTTCTTTCATTT	604	False	NA	45	True	NA	NA	NA	141061926	141073340	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_141062480_141069464_141069657_141070674_141070750_141071484_141071587_141071686_141071819_141071892_141071977_141072797
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161458	chr7	+	169	1	Intergenic	novelGene_4947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAAGTGGCTCTGTGCC	NA	False	NA	NA	False	NA	NA	NA	141122933	141123102	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_141122900_141123100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161466	chr7	+	192	1	Intergenic	novelGene_4948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACACTGCCAAGTTTGA	NA	False	NA	NA	False	NA	NA	NA	141124981	141125173	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_+_141125000_141125200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161476	chr7	-	192	1	Intergenic	novelGene_4949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTATAGGCTTGCCTAC	NA	False	NA	NA	False	NA	NA	NA	141132650	141132458	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_141132500_141132600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161483	chr7	-	204	1	Intergenic	novelGene_4950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCATCACTGTGGCTCT	9952	False	NA	NA	False	NA	NA	NA	141255514	141255310	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_141255300_141255500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161507	chr7	-	1481	5	FSM	ENSMUSG00000025147.8	ENSMUST00000084418.4	1490	5	24	-15	4	0	multi-exon	FALSE	canonical	3	149	junction_3	10.8857705285386	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGCCATTTCATATTATT	NA	False	NA	-19	True	AATAAA	-33	NA	141614778	141562271	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_141563316_141563989_141564115_141569815_141569910_141570081_141570243_141614721
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161522	chr7	-	2030	9	FSM	ENSMUSG00000007891.17	ENSMUST00000151120.9	2127	9	98	-1	-83	1	multi-exon	FALSE	canonical	3	1941	junction_4	107.727593377927	518	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGCTCTGTACTGTT	8782	False	NA	-1	True	AATAAA	-24	NA	141941677	141929646	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_141930476_141930569_141930669_141930762_141930908_141931069_141931193_141934502_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161546	chr7	-	187	1	Intergenic	novelGene_4951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAATAAATTGCCAAA	2463	False	NA	NA	False	NA	NA	NA	142227512	142227325	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_142227300_142227500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161564	chr7	+	1479	8	NNC	ENSMUSG00000037706.18	novel	1533	8	NA	NA	-9	-4	at_least_one_novel_splicesite	FALSE	canonical	3	168	junction_6	2164.64777735317	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGACTGCCAGACCTCTTC	NA	False	NA	38	True	AATAAA	-26	NA	142606521	142621667	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620887_142620971_142621048
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161575	chr7	+	4558	9	Fusion	ENSMUSG00000045752.14_ENSMUSG00000037706.18	novel	1533	8	NA	NA	-6	0	intron_retention	FALSE	canonical	3	158	junction_8	2044.8179472755	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGGCTTTTTCCGGGC	NA	False	NA	22	True	AATAAA	-21	NA	142606524	142624830	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048_142623588_142623672
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161576	chr7	+	1785	7	NIC	ENSMUSG00000037706.18	novel	1533	8	NA	NA	-6	-7	intron_retention	FALSE	canonical	3	5787	junction_4	294.940672000319	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGGACTGCCAGACCTC	NA	False	NA	35	True	AATAAA	-23	NA	142606524	142621664	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620500_142620883_142620971_142621048
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161582	chr7	+	4643	8	FSM	ENSMUSG00000045752.14_ENSMUSG00000037706.18	ENSMUST00000037941.10	1533	8	49	-3159	-6	0	multi-exon	FALSE	canonical	3	5787	junction_4	310.433666383802	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGGCTTTTTCCGGGC	NA	False	NA	22	True	AATAAA	-21	NA	142606524	142624830	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161611	chr7	+	1268	3	FSM	ENSMUSG00000045752.14	ENSMUST00000177841.8	1364	3	102	-6	46	0	multi-exon	FALSE	canonical	3	124	junction_2	18	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGGCTTTTTCCGGGC	NA	False	NA	22	True	AATAAA	-21	NA	142623206	142624830	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_142623251_142623491_142623558_142623672
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161620	chr7	-	739	2	FSM	ENSMUSG00000010760.6	ENSMUST00000010904.5	757	2	15	3	15	-3	multi-exon	FALSE	canonical	3	98	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGTGTGGTCTGTGTAG	NA	False	NA	-1	True	AATAAA	-24	NA	143056263	143055284	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_143055554_143055793
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161623	chr7	-	226	1	Intergenic	novelGene_4952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGACTTTATATAAAAGGA	9303	False	NA	NA	False	NA	NA	NA	143059648	143059422	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_143059400_143059600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161638	chr7	-	2316	16	FSM	ENSMUSG00000059119.10	ENSMUST00000072727.7	2285	16	-31	0	-17	0	multi-exon	FALSE	canonical	3	502	junction_2	192.287354411741	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGGTTTTTTTGTTGTTT	NA	False	NA	-1	True	ATTAAA	-20	NA	143102860	143067315	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_143068375_143072586_143072623_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161639	chr7	-	2279	15	FSM	ENSMUSG00000059119.10	ENSMUST00000208190.2	2259	15	-16	-4	-16	0	multi-exon	FALSE	canonical	3	471	junction_1	167.71624785905	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGGTTTTTTTGTTGTTT	NA	False	NA	-1	True	ATTAAA	-20	NA	143102859	143067315	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_143068375_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161678	chr7	-	2744	23	FSM	ENSMUSG00000010755.18	ENSMUST00000010899.14	3222	23	3	475	3	1	multi-exon	TRUE	canonical	3	290	junction_21	336.211639490553	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTCTGCCCTCTCAG	NA	False	NA	-1	True	AATAAA	-17	NA	143153824	143111441	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161685	chr7	-	4330	20	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	-4	1	intron_retention	TRUE	canonical	3	1234	junction_19	87.7634695804455	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTCTGCCCTCTCAG	NA	False	NA	-1	True	AATAAA	-17	NA	143153797	143111441	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161709	chr7	-	4173	6	FSM	ENSMUSG00000010751.16	ENSMUST00000075588.13	4170	6	2	-5	2	3	multi-exon	FALSE	canonical	3	105	junction_4	22.3338308402298	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTGAATTGGCTCAT	NA	False	NA	NA	False	NA	NA	NA	143203396	143188539	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_143192174_143193638_143193713_143194488_143194601_143197012_143197142_143198517_143198609_143203263
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161720	chr7	-	2653	21	FSM	ENSMUSG00000031090.15	ENSMUST00000033415.15	2641	21	-12	0	-4	0	multi-exon	FALSE	canonical	3	51	junction_5	7.20416546173115	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTTATTGATGTGTACG	NA	False	NA	NA	False	AATAAA	-25	NA	143376590	143349320	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_143349794_143351561_143351739_143352191_143352321_143352777_143352848_143353527_143353660_143356932_143357040_143357750_143357887_143359651_143359821_143360616_143360720_143361123_143361173_143361721_143361847_143362528_143362604_143364905_143365038_143366226_143366345_143366499_143366589_143367126_143367179_143369322_143369413_143369910_143369965_143372829_143372947_143374908_143374970_143376395
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161728	chr7	-	186	1	ISM	ENSMUSG00000031090.15	ENSMUST00000033415.15	2641	21	26822	250	2822	16	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATTTTATTATTATATA	NA	False	NA	0	True	TATAAA	-20	NA	143349756	143349570	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr7_-_143349600_143349800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161739	chr7	+	2399	8	ISM	ENSMUSG00000058454.16	ENSMUST00000124340.8	2556	9	558	-2	-50	2	3prime_fragment	TRUE	canonical	3	394	junction_5	16.39686381163	503	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGTACTGTCTCCTGA	NA	False	NA	34	True	NA	NA	NA	143383920	143402149	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr7_+_143384003_143390374_143390467_143391498_143391722_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161746	chr7	+	2536	9	NIC	ENSMUSG00000058454.16	novel	2752	9	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	171.596137412822	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTTGTACTGTCTCCT	NA	False	NA	32	True	NA	NA	NA	143383950	143402147	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_+_143384003_143387504_143387674_143390374_143390467_143391498_143391722_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161751	chr7	-	182	1	Intergenic	novelGene_4953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	143465853	143465671	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_143465700_143465900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161768	chr7	-	2927	17	FSM	ENSMUSG00000031078.16	ENSMUST00000033407.13	2913	17	-12	-2	-12	2	multi-exon	TRUE	canonical	3	340	junction_7	190.956545694956	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGATCTTCTGCAGTG	NA	False	NA	-16	True	AATAAA	-18	NA	144024494	143989467	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161781	chr7	-	5074	28	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	-13	0	combination_of_known_junctions	TRUE	canonical	2	132	junction_22	23.3465570993897	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAGAGTGCTGTGAACAG	NA	False	NA	-2	True	AATAAA	-24	NA	144107479	144030494	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161792	chr7	-	1529	2	FSM	ENSMUSG00000031077.8	ENSMUST00000033394.8	3903	2	0	2374	0	-2374	multi-exon	FALSE	canonical	3	26	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGCTGGGTGTGATAA	NA	False	NA	-5	True	AATAAA	-21	NA	144136200	144133428	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_144134598_144135840
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161834	chr7	+	155	1	FSM	ENSMUSG00000115783.2	ENSMUST00000227063.2	168	1	0	13	0	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTCAAAGACCCCCCC	NA	False	NA	NA	False	NA	NA	NA	144468206	144468361	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_+_144468200_144468400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161847	chr7	-	3788	5	FSM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	-48	0	8	0	multi-exon	FALSE	canonical	3	335	junction_3	35.5316760088797	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGTTGTCTGTGTTT	NA	False	NA	-4	True	AATAAA	-16	NA	144493654	144483667	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_144486509_144487752_144487902_144491030_144491191_144491623_144491840_144493232
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161861	chr7	-	179	1	Intergenic	novelGene_4954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGGGGAGTTTATCCTT	NA	False	NA	NA	False	NA	NA	NA	144710472	144710293	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr7_-_144710300_144710500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161867	chr7	-	2774	25	FSM	ENSMUSG00000048677.10	ENSMUST00000058022.6	2993	25	84	135	4	0	multi-exon	FALSE	canonical	3	14	junction_4	4.91860837364933	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACCTCTTTCTACTTC	NA	False	NA	1	True	TATAAA	-18	NA	144837664	144807794	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr7_-_144808436_144809187_144809271_144809616_144809699_144810250_144810334_144810466_144810549_144810908_144810983_144811532_144811605_144812251_144812352_144813825_144813876_144814608_144814738_144815669_144815730_144815884_144816005_144820294_144820382_144820514_144820597_144821039_144821141_144821804_144821870_144822596_144822663_144823470_144823571_144826016_144826093_144827598_144827706_144830845_144830963_144832473_144832652_144833013_144833091_144833965_144834031_144837587
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161873	chr8	+	5308	20	FSM	ENSMUSG00000004568.14	ENSMUST00000004684.13	5271	20	-35	-2	-3	2	multi-exon	TRUE	canonical	3	218	junction_1	25.5526180280738	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGCTGAAACAGACCTTC	NA	False	NA	26	True	AATAAA	-16	NA	3443002	3506603	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161901	chr8	+	185	1	Intergenic	novelGene_4955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTATTTTATGAATATAA	3653	False	NA	NA	False	NA	NA	NA	3540474	3540659	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_3540500_3540700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161904	chr8	+	1983	2	FSM	ENSMUSG00000047264.9	ENSMUST00000061508.8	1999	2	16	0	16	0	multi-exon	FALSE	canonical	3	37	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTTGTTACTTGCC	6332	False	NA	16	True	AGTAAA	-17	NA	3543153	3547208	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_3543310_3545381
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161944	chr8	+	4398	32	ISM	ENSMUSG00000004565.16	ENSMUST00000208002.2	4444	35	1438	0	0	0	3prime_fragment	FALSE	canonical	1	71	junction_27	44.5244031581209	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGCTGTCTTTGGGT	NA	False	NA	17	True	AATAAA	-21	NA	3566862	3594267	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr8_+_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000161989	chr8	+	201	1	Intergenic	novelGene_4956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1661	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTACAATACCAATATCACAA	1182	False	NA	NA	False	ATTAAA	-14	NA	3667145	3667346	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_3667100_3667300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162012	chr8	+	1881	19	FSM	ENSMUSG00000004626.15	ENSMUST00000004745.9	1847	19	-34	0	-16	0	multi-exon	FALSE	canonical	3	69	junction_17	74.555886735479	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCTCACCTCATTTTC	4568	False	NA	16	True	AATAAA	-22	NA	3681135	3692795	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691894_3692056_3692645
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162027	chr8	+	180	1	Genic_Genomic	ENSMUSG00000012705.17	novel	NA	NA	NA	NA	4199	38	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCATCCTGGTCTACCTAG	NA	False	NA	NA	False	NA	NA	NA	3709968	3710148	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr8_+_3710000_3710100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162035	chr8	-	381	2	FSM	ENSMUSG00000089665.3	ENSMUST00000159364.3	392	2	14	-3	14	3	multi-exon	FALSE	canonical	3	78	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATGTCTTTCTATTAC	NA	False	NA	-1	True	AATACA	-18	NA	3722348	3721184	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_3721397_3722179
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162063	chr8	+	1538	5	FSM	ENSMUSG00000011837.5	ENSMUST00000011981.5	1536	5	0	-2	0	2	multi-exon	FALSE	canonical	3	110	junction_3	11.3880419739304	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTCCCCCTTTGACAT	NA	False	NA	18	True	AATAAA	-18	NA	4303079	4306222	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_4303305_4304281_4304402_4304550_4304620_4304991_4305374_4305480
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162092	chr8	+	195	1	Intergenic	novelGene_4957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTGGGAGATAATGATG	NA	False	NA	NA	False	NA	NA	NA	4322230	4322425	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_4322200_4322400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162100	chr8	-	5441	6	FSM	ENSMUSG00000040028.11	ENSMUST00000098950.6	5743	6	302	0	-25	0	multi-exon	FALSE	canonical	3	1349	junction_5	146.904594890698	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATCCCATTGTGTTCTT	NA	False	NA	NA	False	AATAAA	-33	NA	4375111	4335381	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4374885
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162114	chr8	-	2531	7	NNC	ENSMUSG00000040028.11	novel	2317	6	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	3	192	junction_6	712.072483826065	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTTGTTTTTTGTT	NA	False	NA	-1	True	ATTAAA	-21	NA	4375104	4338342	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4362556_4362615_4374885
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162140	chr8	+	1716	4	FSM	ENSMUSG00000058748.10	ENSMUST00000202692.5	2364	4	-34	682	-34	169	multi-exon	FALSE	canonical	3	165	junction_1	17.1075032271418	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAATGTGGTAAAGTCTTT	NA	False	NA	5	True	NA	NA	NA	4663132	4679549	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_4663279_4675839_4675967_4676163_4676225_4678167
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162155	chr8	-	3825	13	FSM	ENSMUSG00000022322.9	ENSMUST00000022945.9	2156	13	-39	-1630	-26	1630	multi-exon	TRUE	canonical	3	204	junction_9	39.0672497112351	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTATTCCTCTGCTCATCA	NA	False	NA	NA	False	AATAAA	-19	NA	4829593	4784345	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_4786408_4789124_4789267_4789594_4789682_4791847_4791967_4794446_4794579_4798704_4798826_4799291_4799461_4799551_4799786_4804219_4804313_4814880_4815090_4817906_4818023_4818143_4818312_4829420
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162175	chr8	-	3989	3	FSM	ENSMUSG00000040459.12	ENSMUST00000208252.2	3559	3	-428	-2	-11	2	multi-exon	FALSE	canonical	3	891	junction_2	32	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTAAGCAATTTTTATTA	5244	False	NA	-9	True	AATAAA	-37	NA	8740532	8716573	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_8717417_8731383_8733974_8739976
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162180	chr8	-	1725	4	FSM	ENSMUSG00000040459.12	ENSMUST00000048545.10	3197	4	-27	1499	-27	2	multi-exon	FALSE	canonical	3	754	junction_2	83.8424448328861	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTAAGCAATTTTTATTA	5228	False	NA	-9	True	AATAAA	-37	NA	8740548	8716573	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_8717417_8731383_8731468_8733747_8733974_8739976
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162192	chr8	+	229	1	Intergenic	novelGene_4958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTTTAAGTATGTATTT	NA	False	NA	NA	False	AAAAAG	-22	NA	8797434	8797663	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_8797400_8797700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162201	chr8	+	104	1	Intergenic	novelGene_4959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATGTTTGCCAAAAATTT	NA	False	NA	NA	False	NA	NA	NA	9612544	9612648	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_9612500_9612600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162209	chr8	-	4086	2	FSM	ENSMUSG00000049717.10	ENSMUST00000095476.6	5028	2	-29	971	-29	857	multi-exon	FALSE	canonical	2	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAACTTTATGTTCCTTT	NA	False	NA	-4	True	NA	NA	NA	10026328	10020019	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_10023808_10026030
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162213	chr8	+	5056	2	FSM	ENSMUSG00000040396.13	ENSMUST00000048216.6	5074	2	18	0	18	0	multi-exon	FALSE	canonical	3	144	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGAGTCTTATTCTAAT	NA	False	NA	19	True	AATAAA	-20	NA	10027734	10042155	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_10028020_10037384
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162225	chr8	+	188	1	Intergenic	novelGene_4960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGGGAGATTTTTAAGA	NA	False	NA	NA	False	NA	NA	NA	10222155	10222343	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_10222200_10222300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162240	chr8	+	191	1	Intergenic	novelGene_4961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGATATCATTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	11531295	11531486	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_11531300_11531500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162242	chr8	+	190	1	Intergenic	novelGene_4962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTAGGACAAAGTTAGTT	NA	False	NA	NA	False	NA	NA	NA	11538451	11538641	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_11538500_11538600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162247	chr8	+	1250	10	FSM	ENSMUSG00000031505.12	ENSMUST00000177955.8	1307	10	57	0	-4	0	multi-exon	FALSE	canonical	3	162	junction_1	41.4568048294447	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGAGTTTGTGGTTGTTC	NA	False	NA	33	True	NA	NA	NA	11547562	11563287	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_11547627_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559373_11559452_11559558_11560226_11560348_11561876_11561998_11562894
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162260	chr8	+	1315	10	FSM	ENSMUSG00000031505.12	ENSMUST00000033901.11	1359	10	44	0	19	0	multi-exon	FALSE	canonical	3	77	junction_1	63.9388210675343	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGAGTTTGTGGTTGTTC	NA	False	NA	33	True	NA	NA	NA	11547611	11563287	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_11547741_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559373_11559452_11559558_11560226_11560348_11561876_11561998_11562894
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162270	chr8	-	1822	15	NIC	ENSMUSG00000056228.11	novel	1902	15	NA	NA	-2	4	combination_of_known_junctions	FALSE	canonical	3	153	junction_9	26.6340468006571	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGTGGGCCTATGCTGC	NA	False	NA	-56	True	ATTAAA	-29	NA	11600746	11564016	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_11564192_11564492_11564700_11566150_11566250_11567818_11567943_11568405_11568545_11568923_11568991_11576001_11576070_11579579_11579714_11580294_11580425_11587271_11587356_11591897_11592004_11592518_11592591_11597726_11597845_11600257_11600309_11600498
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162281	chr8	+	2481	2	FSM	ENSMUSG00000045969.9	ENSMUST00000054399.6	2814	2	335	-2	290	2	multi-exon	FALSE	canonical	3	454	junction_1	0	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTATTTCCTTATGTG	NA	False	NA	18	True	NA	NA	NA	11606400	11613253	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_11607046_11611417
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162287	chr8	+	1989	2	FSM	ENSMUSG00000045969.9	ENSMUST00000209565.2	1971	2	-17	-1	-17	0	multi-exon	FALSE	canonical	3	111	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTTTATTTCCTTATG	NA	False	NA	16	True	NA	NA	NA	11608411	11613251	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_11608567_11611417
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162299	chr8	-	2405	7	FSM	ENSMUSG00000031508.15	ENSMUST00000210530.2	2398	7	-5	-2	-2	2	multi-exon	FALSE	canonical	3	111	junction_4	160.305350988529	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCTCTGAAACTGCTTT	NA	False	NA	0	True	AATAAA	-17	NA	11685759	11661580	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_11662948_11665814_11665911_11669061_11669298_11670261_11670374_11678438_11678531_11682865_11683019_11685410
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162300	chr8	-	2294	6	FSM	ENSMUSG00000031508.15	ENSMUST00000033905.13	2285	6	-6	-3	-3	2	multi-exon	FALSE	canonical	3	209	junction_3	111.790876193006	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCTCTGAAACTGCTTT	NA	False	NA	0	True	AATAAA	-17	NA	11685760	11661580	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_11662948_11665814_11665911_11669061_11669298_11678438_11678531_11682865_11683019_11685410
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162322	chr8	-	7028	6	NIC	ENSMUSG00000031508.15	novel	2447	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	89	junction_3	156.362399572276	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11685754	11661582	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_11662948_11665814_11665911_11669061_11669298_11673696_11678531_11682865_11683019_11685410
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162334	chr8	-	5150	5	FSM	ENSMUSG00000031508.15	ENSMUST00000169782.3	5156	5	6	0	3	0	multi-exon	FALSE	canonical	3	209	junction_2	122.541829593001	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11685751	11661582	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_11665911_11669061_11669298_11678438_11678531_11682865_11683019_11685410
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162341	chr8	-	182	1	Intergenic	novelGene_4963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGGTGTGGTGGCGCAT	4820	False	NA	NA	False	NA	NA	NA	11753436	11753254	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_11753300_11753400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162344	chr8	+	4469	20	FSM	ENSMUSG00000031511.17	ENSMUST00000074856.13	4451	20	-18	0	-18	0	multi-exon	FALSE	canonical	3	61	junction_7	14.3717944757881	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTGCTTCATCTTCCTT	9610	False	NA	17	True	ATTAAA	-27	NA	11808335	11885219	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162358	chr8	-	162	1	Intergenic	novelGene_4964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGATCATAAACTT	NA	False	NA	NA	False	NA	NA	NA	12156592	12156430	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_12156400_12156600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162364	chr8	+	179	1	Intergenic	novelGene_4965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTTTAAAGG	NA	False	NA	NA	False	NA	NA	NA	12469564	12469743	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_12469600_12469700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162371	chr8	+	181	1	Intergenic	novelGene_4966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAGAATACACA	NA	False	NA	NA	False	NA	NA	NA	12565697	12565878	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_12565700_12565900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162373	chr8	-	3675	22	FSM	ENSMUSG00000000759.15	ENSMUST00000000776.15	3797	22	122	0	-3	0	multi-exon	TRUE	canonical	3	142	junction_11	12.9206544206397	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATGTGGTTTCTGAA	NA	False	NA	1	True	ATTAAA	-18	NA	12722126	12664276	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162393	chr8	+	196	1	Intergenic	novelGene_4967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGCAAAAAAGGCTGACCTA	NA	False	NA	NA	False	NA	NA	NA	12725274	12725470	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_12725300_12725500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162407	chr8	+	197	1	Intergenic	novelGene_4968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGCGAACAACCACACTC	5516	False	NA	NA	False	NA	NA	NA	12762599	12762796	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_12762600_12762800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162410	chr8	+	3932	29	NIC	ENSMUSG00000031441.16	novel	7443	29	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_28	12.9998037661798	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTGATGTGCTGCTTT	NA	False	NA	10	True	AATAAA	-17	NA	12807011	12912205	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12911911
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162433	chr8	+	205	1	Intergenic	novelGene_4969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGCAGTCAGTGCTCTT	1039	False	NA	NA	False	NA	NA	NA	13201997	13202202	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_13202000_13202200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162488	chr8	-	174	1	Intergenic	novelGene_4970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCGGAGCAAAGGTCCTGAA	NA	False	NA	-1	True	NA	NA	NA	13268622	13268448	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_13268400_13268600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162496	chr8	-	2739	7	FSM	ENSMUSG00000038506.14	ENSMUST00000045366.10	2748	7	9	0	1	0	multi-exon	FALSE	canonical	3	25	junction_2	9.7082439194738	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGATGTCCTTTATTC	NA	False	NA	-3	True	AATAAA	-14	NA	13337832	13305963	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_13307977_13308946_13309044_13311384_13311468_13321589_13321721_13328516_13328686_13330908_13331126_13337803
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162538	chr8	+	2594	12	NIC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	464	junction_1	173.205128471779	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTTTCTGTAACTC	2134	False	NA	94	True	AATAAA	-24	NA	13388781	13428448	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_13388921_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162556	chr8	+	3321	11	FSM	ENSMUSG00000038482.12	ENSMUST00000170909.2	1700	11	-875	-746	8	0	multi-exon	FALSE	canonical	3	905	junction_5	61.5983766019852	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTTTCTGTAACTC	2151	False	NA	94	True	AATAAA	-24	NA	13388798	13428448	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162588	chr8	-	2599	15	FSM	ENSMUSG00000031451.7	ENSMUST00000033828.7	2548	15	-51	0	-51	0	multi-exon	FALSE	canonical	3	43	junction_8	9.27719389312373	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTTGGTCACTGTCT	5709	False	NA	1	True	AATAAA	-23	NA	13544541	13515373	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_13515901_13516626_13516856_13518191_13518365_13520218_13520388_13521448_13521614_13524656_13524847_13525038_13525158_13526111_13526234_13527043_13527167_13528251_13528375_13529006_13529130_13533673_13533737_13535670_13535696_13543845_13544013_13544260
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162604	chr8	+	188	1	Intergenic	novelGene_4971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTGACCTCACTCTCTC	9823	False	NA	NA	False	NA	NA	NA	13801971	13802159	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_13802000_13802200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162608	chr8	+	2322	18	FSM	ENSMUSG00000038416.16	ENSMUST00000043962.9	2301	18	-21	0	-21	0	multi-exon	FALSE	canonical	3	559	junction_10	60.600055957127	314	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCCAAGCTGGTAGAGTG	NA	False	NA	17	True	AATAAA	-24	NA	13807654	13831938	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162623	chr8	+	1579	9	FSM	ENSMUSG00000038398.9	ENSMUST00000043767.9	2057	9	11	467	-9	-467	multi-exon	FALSE	canonical	3	271	junction_6	38.5873603010105	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTTGTTTTTGTTTTT	NA	False	NA	15	True	AATAAA	-28	NA	13835625	13848726	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_13835885_13836146_13836254_13837364_13837472_13841881_13841981_13842099_13842211_13845439_13845496_13845583_13845740_13846458_13846593_13848176
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162634	chr8	+	3990	2	FSM	ENSMUSG00000047710.9	ENSMUST00000051870.8	4013	2	25	-2	25	2	multi-exon	FALSE	canonical	3	209	junction_1	0	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTGTACTTAATTTTT	NA	False	NA	19	True	ATTAAA	-21	NA	13919665	13931641	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_13919812_13927797
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162662	chr8	+	2048	10	FSM	ENSMUSG00000038365.9	ENSMUST00000043520.5	2012	10	-31	-5	-31	5	multi-exon	FALSE	canonical	3	86	junction_9	11.3572731903828	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCTGCAACAATAACTG	NA	False	NA	19	True	AATAAA	-25	NA	13957771	13990527	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_13957864_13964943_13965085_13970947_13971049_13971884_13971935_13973924_13974018_13976947_13977042_13979255_13979441_13981181_13981365_13985145_13985290_13989562
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162678	chr8	-	2604	3	FSM	ENSMUSG00000050052.13	ENSMUST00000062613.12	2463	3	-140	-1	115	1	multi-exon	FALSE	canonical	3	271	junction_2	12.5	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTAGTGTGTATATTTAT	4640	False	NA	-3	True	ATTAAA	-19	NA	14024917	14002006	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_14004136_14005719_14005818_14024540
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162693	chr8	+	193	1	Intergenic	novelGene_4972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCACCCCACTAGCCGGG	2917	False	NA	NA	False	NA	NA	NA	14020335	14020528	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_14020300_14020500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162698	chr8	+	176	1	Intergenic	novelGene_4973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAAGAGTTTAA	NA	False	NA	NA	False	NA	NA	NA	14057868	14058044	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_14057900_14058000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162705	chr8	-	3246	6	FSM	ENSMUSG00000051978.10	ENSMUST00000110813.5	1557	6	-25	-1664	-25	1664	multi-exon	FALSE	canonical	3	204	junction_5	39.1591624016653	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTGGTTTTTTTTTT	NA	False	NA	-10	True	NA	NA	NA	14140326	14075896	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_14078154_14080592_14080785_14083335_14083765_14114204_14114340_14128769_14128917_14140240
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162724	chr8	+	193	1	Intergenic	novelGene_4974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATGAAACTGAACTGAAGA	1903	False	NA	NA	False	NA	NA	NA	14092388	14092581	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_14092400_14092600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162727	chr8	-	190	1	Intergenic	novelGene_4975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAATCCAGCAA	NA	False	NA	NA	False	NA	NA	NA	14100691	14100501	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_14100500_14100700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162737	chr8	+	2334	3	FSM	ENSMUSG00000026317.8	ENSMUST00000027554.8	6857	3	742	3781	-151	2880	multi-exon	FALSE	canonical	3	162	junction_1	24.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAGGTATGATGCCTAT	NA	False	NA	10	True	TATAAA	-18	NA	14938852	14947939	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_14939119_14944571_14945231_14946530
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162739	chr8	+	2466	4	NIC	ENSMUSG00000026317.8	novel	6857	3	NA	NA	-151	2880	combination_of_known_junctions	FALSE	canonical	3	37	junction_2	81.7897032367495	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAGGTATGATGCCTAT	NA	False	NA	10	True	TATAAA	-18	NA	14938852	14947939	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_14939119_14940491_14940624_14944571_14945231_14946530
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162757	chr8	+	198	1	Intergenic	novelGene_4976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGCTGGGAGTGAAACTC	NA	False	NA	NA	False	NA	NA	NA	18642990	18643188	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_18643000_18643200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162760	chr8	+	4864	14	FSM	ENSMUSG00000039842.16	ENSMUST00000039412.15	4662	14	4	-206	4	206	multi-exon	FALSE	canonical	3	150	junction_4	12.6528524276628	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCTTGTTAATGCTACA	NA	False	NA	NA	False	AGTAAA	-17	NA	18645150	18853411	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162775	chr8	+	2845	8	FSM	ENSMUSG00000031467.11	ENSMUST00000149565.8	10779	8	-6	7940	-6	0	multi-exon	FALSE	canonical	3	636	junction_4	34.1778063804509	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTCTTGTTTTTTCAA	NA	False	NA	15	True	AATAAA	-25	NA	18896286	18933437	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18926147_18928022_18928185_18929620_18929745_18931753
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162784	chr8	+	194	1	Intergenic	novelGene_4977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTAGGCAGCGCAG	NA	False	NA	NA	False	NA	NA	NA	18946410	18946604	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_18946400_18946600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162795	chr8	+	172	1	Intergenic	novelGene_4978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTCTTAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	19046906	19047078	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_19046900_19047100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162800	chr8	+	714	1	FSM	ENSMUSG00000081094.5	ENSMUST00000122422.3	591	1	-26	-97	-26	97	mono-exon	FALSE	NA	NA	NA	NA	NA	1138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGACTCAGAGCTAAACAA	7091	False	NA	NA	False	AATAAA	-32	NA	19542925	19543639	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_19542900_19543600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162809	chr8	+	196	1	Intergenic	novelGene_4979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATATTGTCACATGGG	NA	False	NA	NA	False	NA	NA	NA	19750647	19750843	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_19750600_19750800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162814	chr8	+	207	1	Intergenic	novelGene_4980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATCACTGAAGAGTGACA	NA	False	NA	NA	False	AAAACA	-16	NA	19755241	19755448	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_19755200_19755400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162822	chr8	+	4922	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-125	-177	multi-exon	FALSE	canonical	3	606	junction_2	335.627770007191	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	19834636	20045711	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr8_+_19834867_20030550_20030924_20035860_20036160_20039783_20039904_20041811
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162827	chr8	+	4747	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-117	-177	multi-exon	FALSE	canonical	3	906	junction_2	214.058403245469	287	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	19834644	20045711	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036160_20039783_20039904_20041811
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162849	chr8	+	1115	4	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-18	335	multi-exon	FALSE	canonical	3	77	junction_3	482.157881012249	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCATTCAACGTTAGGGC	NA	False	NA	NA	False	AATAAA	-15	NA	19834743	20046223	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036156_20045732
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162858	chr8	+	4056	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-13	-760	multi-exon	FALSE	canonical	3	67	junction_3	498.113629104846	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	19834748	20045128	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036156_20039783_20039904_20041811
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162862	chr8	+	4051	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-13	-760	multi-exon	FALSE	canonical	3	80	junction_2	557.921813518704	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	19834748	20045128	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr8_+_19834867_20030550_20030748_20035860_20036160_20039783_20039904_20041811
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162877	chr8	+	4748	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	0	-177	at_least_one_novel_splicesite	FALSE	canonical	3	882	junction_1	265.429369136123	63	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	20016465	20045711	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_+_20016689_20030550_20030757_20035860_20036160_20039783_20039904_20041811
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162890	chr8	+	1194	4	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	21	335	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_3	385.262104143256	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCATTCAACGTTAGGGC	NA	False	NA	NA	False	AATAAA	-15	NA	20016486	20046223	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_+_20016689_20030550_20030757_20035860_20036156_20045732
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162916	chr8	+	203	1	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	37597	1233	23348	-1233	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATCGCTGAAGAGTGACA	NA	False	NA	NA	False	AATAGA	-33	NA	20054062	20054265	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr8_+_20054100_20054300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162920	chr8	+	7017	1	Intergenic	novelGene_4981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	20119986	20127003	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_20120000_20127000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162931	chr8	+	201	1	Intergenic	novelGene_4982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTATACAAAGTATCAAC	NA	False	NA	NA	False	NA	NA	NA	20603756	20603957	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_20603800_20604000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162935	chr8	+	4144	5	NNC	ENSMUSG00000096401.3	novel	930	5	NA	NA	-14516	-793	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	485.575624903063	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTACGTGTGGCACCATT	NA	False	NA	NA	False	AATAAA	-22	NA	20697586	20726473	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_+_20697782_20711891_20712098_20717197_20717497_20721120_20721241_20723149
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162941	chr8	+	4767	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-126	-206	multi-exon	FALSE	canonical	3	434	junction_2	317.198183317622	128	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	20697858	20727060	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr8_+_20698090_20711891_20712098_20717197_20717497_20721120_20721241_20723149
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162981	chr8	+	196	1	Intergenic	novelGene_4983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATATATATATATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	20730810	20731006	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_20730800_20731000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000162994	chr8	+	196	1	Intergenic	novelGene_4984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATATATATATATAAATA	NA	False	NA	NA	False	NA	NA	NA	21125777	21125973	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_21125800_21126000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163001	chr8	+	203	1	Intergenic	novelGene_4985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATCGCTGAAGAGTGACA	NA	False	NA	NA	False	AATAGA	-33	NA	21130920	21131123	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_21130900_21131100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163012	chr8	+	4962	4	FSM	ENSMUSG00000063362.14	ENSMUST00000072572.13	4960	4	-2	0	-2	0	multi-exon	FALSE	canonical	3	45	junction_2	9.93310961716756	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGGCTCCCTTTGGTG	NA	False	NA	5	True	NA	NA	NA	22550734	22561643	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_22550787_22551901_22552133_22555015_22555948_22557896
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163016	chr8	+	4966	4	NNC	ENSMUSG00000063362.14	novel	4960	4	NA	NA	-2	0	intron_retention	FALSE	canonical	3	51	junction_2	7.11805216802087	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGGCTCCCTTTGGTG	NA	False	NA	5	True	NA	NA	NA	22550734	22561643	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_+_22550787_22551901_22552137_22555015_22555948_22557896
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163026	chr8	+	171	1	Intergenic	novelGene_4986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAATAAGTAAAT	NA	False	NA	NA	False	NA	NA	NA	22611243	22611414	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_22611200_22611400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163029	chr8	-	2038	16	FSM	ENSMUSG00000031478.17	ENSMUST00000033865.16	2021	16	-17	0	6	0	multi-exon	FALSE	canonical	3	19	junction_15	6.34350061086148	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGTGTGCTGGTTTTCAA	NA	False	NA	2	True	AATACA	-17	NA	22656445	22618298	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_22618807_22619360_22619485_22621221_22621354_22622065_22622210_22623008_22623112_22632905_22632956_22636946_22637020_22638498_22638700_22639876_22639932_22646991_22647079_22647165_22647234_22648642_22648727_22650207_22650306_22650385_22650474_22652339_22652511_22656393
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163037	chr8	+	175	1	Intergenic	novelGene_4987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAAAAGTGGGC	NA	False	NA	NA	False	NA	NA	NA	22651041	22651216	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_22651000_22651200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163064	chr8	+	3559	14	FSM	ENSMUSG00000031479.10	ENSMUST00000033866.9	3574	14	10	5	10	-5	multi-exon	TRUE	canonical	3	316	junction_5	36.370219952707	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAATGTGGGAATTTTTCT	NA	False	NA	4	True	GATAAA	-17	NA	22682834	22710854	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_22682983_22688913_22688983_22692289_22692361_22695682_22695798_22696792_22696883_22697872_22697960_22700284_22700318_22700404_22700483_22701553_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227_22708305_22708414
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163090	chr8	+	192	1	Intergenic	novelGene_4988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGTAAGAGAGGG	NA	False	NA	NA	False	AATAAA	-9	NA	22913647	22913839	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_22913600_22913800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163102	chr8	+	196	1	Intergenic	novelGene_4989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGACACACCCATACAAT	7471	False	NA	NA	False	NA	NA	NA	22929754	22929950	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_22929800_22930000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163107	chr8	-	1351	4	FSM	ENSMUSG00000031534.16	ENSMUST00000033935.16	1402	4	52	-1	25	0	multi-exon	FALSE	canonical	3	179	junction_1	20.3960780543711	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTTGCATCATTTTGT	NA	False	NA	0	True	NA	NA	NA	22966846	22952629	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_22953392_22961464_22961590_22963457_22963597_22966521
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163114	chr8	+	3664	11	FSM	ENSMUSG00000037656.10	ENSMUST00000067786.9	3566	11	-94	-4	-94	4	multi-exon	FALSE	canonical	3	459	junction_6	45.0493063209635	368	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGACGTCTTTTTCTTT	NA	False	NA	19	True	AATAAA	-24	NA	22966709	23059632	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_22966942_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163153	chr8	+	205	1	Intergenic	novelGene_4990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAATGGTCAAAAT	8334	False	NA	NA	False	NA	NA	NA	23093917	23094122	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_23093900_23094100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163159	chr8	+	203	1	Intergenic	novelGene_4991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTTTATGGGCGGGAAA	4475	False	NA	NA	False	NA	NA	NA	23100107	23100310	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_23100100_23100300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163168	chr8	-	1211	14	FSM	ENSMUSG00000031536.7	ENSMUST00000033938.7	1201	14	-12	2	5	-2	multi-exon	FALSE	canonical	3	173	junction_8	16.1157058899497	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTCTTAACAAATGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	23143446	23118143	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_23118386_23120358_23120499_23121470_23121536_23127083_23127171_23129949_23130021_23130374_23130448_23130528_23130584_23132320_23132373_23135060_23135111_23137428_23137488_23138197_23138273_23140504_23140572_23143075_23143134_23143329
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163175	chr8	+	211	1	Intergenic	novelGene_4992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGAGTAAAAGCCAATC	3901	False	NA	NA	False	NA	NA	NA	23136042	23136253	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_23136000_23136300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163184	chr8	-	3567	22	FSM	ENSMUSG00000031537.16	ENSMUST00000033939.13	3580	22	13	0	-2	0	multi-exon	FALSE	canonical	3	43	junction_1	18.670796433355	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGAGTCATGTCATTGA	NA	False	NA	0	True	NA	NA	NA	23196581	23149227	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_23150476_23151417_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163201	chr8	+	173	1	Intergenic	novelGene_4993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATATATGATTTAATAT	NA	False	NA	NA	False	NA	NA	NA	23527316	23527489	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_23527300_23527500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163221	chr8	+	196	1	Intergenic	novelGene_4994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAGACAAGACAGTATG	NA	False	NA	NA	False	NA	NA	NA	23689221	23689417	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_23689200_23689400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163234	chr8	-	1818	6	FSM	ENSMUSG00000015341.18	ENSMUST00000051094.9	1792	6	-6	-20	-6	20	multi-exon	TRUE	canonical	3	715	junction_5	234.329170185873	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGATTTGATAAAGGGAAT	NA	False	NA	1	True	AATAAA	-21	NA	23747096	23731341	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_23732648_23734746_23734810_23735878_23735981_23740264_23740418_23746689_23746823_23747035
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163244	chr8	-	1967	5	FSM	ENSMUSG00000015341.18	ENSMUST00000121783.7	1945	5	-14	-8	-14	1	multi-exon	FALSE	canonical	3	1223	junction_2	41.2946727799119	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCTTGTCTTAGTCTAT	NA	False	NA	-18	True	AATAAA	-2	NA	23747051	23731360	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_23732648_23734746_23734810_23735878_23735981_23740264_23740418_23746689
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163257	chr8	+	4626	3	FSM	ENSMUSG00000031548.8	ENSMUST00000033952.8	4372	3	-252	-2	-252	2	multi-exon	FALSE	canonical	3	1172	junction_2	95.5	508	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGAGTTGTGATTGACCC	NA	False	NA	26	True	ACTAAA	-19	NA	23901265	23939650	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_23902345_23907345_23907424_23936181
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163275	chr8	+	1241	4	FSM	ENSMUSG00000031556.7	ENSMUST00000033961.7	1281	4	40	0	-8	0	multi-exon	FALSE	canonical	3	225	junction_1	26.3185612575358	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTGAGTATTTC	NA	False	NA	14	True	AATAAA	-14	NA	25507266	25513276	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_25507609_25508081_25508170_25510454_25510571_25512581
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163282	chr8	-	3270	12	FSM	ENSMUSG00000031557.17	ENSMUST00000128715.8	3463	12	200	-7	-14	7	multi-exon	FALSE	canonical	0	0	junction_11	42.7701912106826	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTGTGTTTTGGTTTT	5811	False	NA	27	True	NA	NA	NA	25591801	25530848	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25591675
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163297	chr8	-	6256	11	NIC	ENSMUSG00000065954.12	novel	6471	11	NA	NA	-7	-2	combination_of_known_junctions	TRUE	canonical	3	13	junction_10	20.3492014585339	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCGGGGTGTGTTGTCTT	NA	False	NA	-2	True	AATAAA	-19	NA	25730924	25644569	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25730809
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163308	chr8	+	181	1	Intergenic	novelGene_4995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATAAGAGTTGCCTTGGT	1339	False	NA	NA	False	NA	NA	NA	25689033	25689214	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_25689000_25689200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163312	chr8	+	198	1	Intergenic	novelGene_4996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTAATCTTCCTTCCTTTC	7057	False	NA	NA	False	NA	NA	NA	25701182	25701380	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_25701200_25701400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163321	chr8	-	194	1	Intergenic	novelGene_4997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTTTATTTATTTTAT	NA	False	NA	NA	False	NA	NA	NA	25705012	25704818	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_25704800_25705000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163328	chr8	+	189	1	Intergenic	novelGene_4998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCACACCTATCAGGAAGC	NA	False	NA	NA	False	NA	NA	NA	25705881	25706070	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_25705900_25706100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163337	chr8	+	180	1	Intergenic	novelGene_4999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATGAAGGACATTTTTT	293	False	NA	NA	False	NA	NA	NA	25808949	25809129	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_25808900_25809100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163340	chr8	-	191	1	Intergenic	novelGene_5000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTAATAGGTTCAAGCTC	NA	False	NA	NA	False	NA	NA	NA	25956837	25956646	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_25956600_25956800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163350	chr8	+	4053	18	NIC	ENSMUSG00000031565.19	novel	4046	18	NA	NA	3	6	combination_of_known_junctions	FALSE	canonical	3	61	junction_9	55.8011174250333	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGGGCGTGTGAAAAGAG	NA	False	NA	21	True	AATAAA	-24	NA	26008807	26064807	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163351	chr8	+	4059	18	NIC	ENSMUSG00000031565.19	novel	5025	18	NA	NA	3	6	combination_of_known_junctions	FALSE	canonical	3	61	junction_9	52.4816659369305	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGGGCGTGTGAAAAGAG	NA	False	NA	21	True	AATAAA	-24	NA	26008807	26064807	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163360	chr8	+	194	1	Intergenic	novelGene_5001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTGCTTTGTTTGCTTG	NA	False	NA	NA	False	NA	NA	NA	26037477	26037671	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_26037500_26037700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163367	chr8	+	3848	8	FSM	ENSMUSG00000054823.18	ENSMUST00000136107.9	3818	8	-36	6	-36	-6	multi-exon	FALSE	canonical	3	91	junction_5	11.0435131943358	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAATCCTTACATATTTA	9649	False	NA	NA	False	AATAAA	-20	NA	26092263	26164926	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163383	chr8	-	4285	18	NIC	ENSMUSG00000061313.11	novel	4246	18	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	1	18	junction_17	11.4631952042464	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTGGCCTTATCTATC	NA	False	NA	-3	True	AATAAA	-22	NA	26244428	26215372	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_26217391_26217656_26217765_26222989_26223150_26224742_26224914_26225035_26225139_26225771_26225928_26226033_26226118_26228238_26228335_26229489_26229613_26231313_26231382_26231627_26231837_26236844_26236981_26238564_26238655_26239753_26239875_26240729_26240820_26242126_26242318_26242974_26243201_26244293
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163397	chr8	-	4831	5	FSM	ENSMUSG00000037316.10	ENSMUST00000038498.10	4876	5	47	-2	-42	2	multi-exon	FALSE	canonical	3	378	junction_2	10.356157588604	274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTTCTCTCTAGCACC	NA	False	NA	NA	False	AATAAA	-27	NA	26275268	26254563	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_26258438_26259309_26259565_26261106_26261362_26267450_26267556_26274926
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163407	chr8	+	1221	4	FSM	ENSMUSG00000037296.8	ENSMUST00000038421.8	2663	4	4	1438	4	413	multi-exon	FALSE	canonical	3	365	junction_2	35.9660333586504	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTTCTGGTGGAGAGT	8444	False	NA	24	True	AATAAA	-27	NA	26275319	26292565	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_26275746_26282184_26282254_26283704_26283821_26291955
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163424	chr8	-	177	1	ISM	ENSMUSG00000031575.19	ENSMUST00000068892.15	3307	16	24603	12	7391	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAAATTTCCCAA	NA	False	NA	NA	False	NA	NA	NA	26306212	26306035	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr8_-_26306000_26306200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163433	chr8	-	2428	16	FSM	ENSMUSG00000031575.19	ENSMUST00000068892.15	3307	16	5	874	5	0	multi-exon	FALSE	canonical	3	230	junction_15	813.355748325008	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCTTCACTGGAAGTGA	NA	False	NA	-6	True	AATAAA	-25	NA	26330810	26306897	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26330609
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163456	chr8	-	243	1	Intergenic	novelGene_5002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGATACTGGAG	NA	False	NA	NA	False	NA	NA	NA	26390932	26390689	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_26390700_26390900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163457	chr8	+	193	1	Intergenic	novelGene_5003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTCAGAAGAAGTATTCT	NA	False	NA	NA	False	NA	NA	NA	26416133	26416326	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_26416100_26416300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163459	chr8	+	164	1	Intergenic	novelGene_5004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTCCAGGTTAGCTGG	NA	False	NA	NA	False	NA	NA	NA	26423251	26423415	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_26423300_26423400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163468	chr8	-	2507	18	FSM	ENSMUSG00000037260.9	ENSMUST00000037609.8	2694	18	1	186	1	-186	multi-exon	TRUE	canonical	3	85	junction_10	15.0390495171943	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTGTCTGATTTTATT	NA	False	NA	-22	True	TATAAA	-20	NA	26466780	26434666	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_26435344_26436263_26436377_26436474_26436546_26437961_26438040_26441996_26442084_26443308_26443436_26444633_26444756_26445701_26445818_26447217_26447379_26449610_26449642_26450853_26450931_26453382_26453487_26454821_26454892_26458390_26458461_26461074_26461197_26461593_26461731_26462869_26462986_26466552
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163473	chr8	-	2781	5	FSM	ENSMUSG00000037251.6	ENSMUST00000061850.5	3613	5	12	820	12	-820	multi-exon	FALSE	canonical	3	50	junction_4	28.3681159050086	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGGTGCTGGCATCCT	NA	False	NA	NA	False	AATAAA	-16	NA	26484149	26471451	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_26473673_26476273_26476561_26477522_26477669_26479677_26479770_26484114
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163485	chr8	-	1683	9	FSM	ENSMUSG00000015994.11	ENSMUST00000016138.11	1930	9	4	243	4	155	multi-exon	FALSE	canonical	3	814	junction_5	99.1573875210516	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATAGTGTTTGATGTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	26505674	26488992	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_26489593_26489796_26489969_26490997_26491061_26494443_26494593_26497214_26497342_26499692_26499798_26501117_26501233_26503497_26503584_26505408
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163503	chr8	+	205	1	Antisense	novelGene_ENSMUSG00000037234.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAACAGACTAAAGCTTT	NA	False	NA	NA	False	NA	NA	NA	26530008	26530213	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr8_+_26530000_26530200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163519	chr8	+	3808	8	FSM	ENSMUSG00000013878.19	ENSMUST00000014022.15	3929	8	124	-3	16	3	multi-exon	FALSE	canonical	3	49	junction_2	13.0243100800474	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTTATGTTTCTA	NA	False	NA	10	True	AATAAA	-20	NA	26609519	26633902	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_26609629_26610467_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26625656_26625731_26629007_26629119_26630838
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163526	chr8	+	2229	3	FSM	ENSMUSG00000037214.13	ENSMUST00000036807.13	2295	3	66	0	-26	0	multi-exon	FALSE	canonical	3	177	junction_1	13	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGCCCTGCTTTTTT	NA	False	NA	7	True	ATTAAA	-18	NA	26648234	26654179	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_26648550_26650802_26650999_26652461
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163543	chr8	+	4844	12	FSM	ENSMUSG00000031483.9	ENSMUST00000033873.9	4838	12	-2	-4	-2	4	multi-exon	FALSE	canonical	3	258	junction_9	30.3309568287708	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTCATTGTTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	27513824	27530360	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163554	chr8	+	2022	8	FSM	ENSMUSG00000031485.16	ENSMUST00000033875.10	3603	8	17	1564	11	1	multi-exon	FALSE	canonical	3	235	junction_4	11.5881713089561	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGTGATGAGTGAATT	NA	False	NA	14	True	ATTAAA	-16	NA	27532599	27544596	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_27532742_27535055_27535164_27535425_27535462_27535951_27536028_27539201_27539337_27541286_27541430_27542263_27542363_27543313
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163569	chr8	-	1394	4	FSM	ENSMUSG00000031487.6	ENSMUST00000033877.6	1899	4	39	466	-9	375	multi-exon	FALSE	canonical	3	75	junction_1	8.9938250421547	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGACTCTTGGCTTTTC	NA	False	NA	NA	False	NA	NA	NA	27618669	27613857	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_27614649_27615847_27616170_27617487_27617548_27618448
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163574	chr8	-	4340	5	FSM	ENSMUSG00000031488.15	ENSMUST00000033878.14	3217	5	0	-1123	0	1123	multi-exon	FALSE	canonical	3	63	junction_1	8.6421930087218	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTGAAAATGTACATGTA	NA	False	NA	65	True	TATAAA	-19	NA	27664674	27630862	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_27633423_27640722_27640832_27644173_27644964_27646254_27646698_27664236
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163589	chr8	-	226	1	Intergenic	novelGene_5005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAGAAATGTTGTATGT	NA	False	NA	NA	False	AATAAA	-22	NA	27637072	27636846	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_27636800_27637100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163593	chr8	-	184	1	Intergenic	novelGene_5006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCGCATTTGTGTAAGAG	NA	False	NA	NA	False	NA	NA	NA	27647010	27646826	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_27646800_27647000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163609	chr8	+	2807	1	Intergenic	novelGene_5007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	AAAACA	-45	NA	27693076	27695883	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_27693100_27695900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163621	chr8	+	212	1	Intergenic	novelGene_5008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACAAACAAACCCCAGAA	NA	False	NA	NA	False	NA	NA	NA	27746762	27746974	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_27746800_27747000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163629	chr8	+	2001	3	FSM	ENSMUSG00000031490.7	ENSMUST00000033880.7	1997	3	-3	-1	-3	1	multi-exon	FALSE	canonical	3	14377	junction_1	319.5	1908	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATTGGTTCCCAGTGGT	NA	False	NA	16	True	NA	NA	NA	27750353	27766703	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_27750579_27763350_27763531_27765107
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163650	chr8	+	2167	7	FSM	ENSMUSG00000031577.11	ENSMUST00000209851.2	3133	7	1	965	0	-965	multi-exon	FALSE	canonical	3	124	junction_5	19.2476549798208	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATCTCTTCTATTTGT	NA	False	NA	6	True	ATTAAA	-17	NA	31640343	31650117	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31645730_31645805_31645950_31648620_31648784_31649909
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163673	chr8	+	3142	5	FSM	ENSMUSG00000046152.17	ENSMUST00000066173.12	3183	5	43	-2	27	2	multi-exon	FALSE	canonical	3	13	junction_3	11.5758369027902	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTATTCTTTGGAGGA	NA	False	NA	12	True	AATAAA	-25	NA	31677401	31751513	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_31677491_31684981_31685318_31691237_31691533_31725622_31726459_31749927
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163674	chr8	+	2920	4	FSM	ENSMUSG00000046152.17	ENSMUST00000161788.8	2962	4	42	0	27	0	multi-exon	FALSE	canonical	3	13	junction_3	13.29995822884	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCACTGTCGCAGACTCTC	NA	False	NA	6	True	AATAAA	-16	NA	31677401	31727822	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_31677491_31684981_31685318_31691237_31691533_31725622
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163679	chr8	-	6362	34	FSM	ENSMUSG00000031583.14	ENSMUST00000033990.7	5019	34	-39	-1304	-3	6	multi-exon	FALSE	canonical	3	28	junction_14	7.07885533384216	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTCAGATATGATTATATA	NA	False	NA	NA	False	NA	NA	NA	33875539	33724405	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_33726488_33730976_33731183_33738949_33739113_33741732_33741865_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33778783_33778966_33782585_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33819129_33819245_33824203_33824274_33826024_33826175_33833004_33833154_33833574_33833721_33842101_33842215_33843322_33843428_33875369
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163685	chr8	-	193	1	Intergenic	novelGene_5009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAACACCCAACAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	33991367	33991174	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_33991200_33991400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163690	chr8	+	186	1	Intergenic	novelGene_5010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCAGAGTCCCACTCGCT	NA	False	NA	NA	False	NA	NA	NA	34002838	34003024	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_34002800_34003000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163696	chr8	+	360	1	Intergenic	novelGene_5011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	292	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCACTTACGTTCTAGGA	NA	False	NA	NA	False	NA	NA	NA	34035588	34035948	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_34035600_34035900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163712	chr8	-	1651	8	FSM	ENSMUSG00000052906.8	ENSMUST00000095349.6	2808	8	-10	1167	-10	-1167	multi-exon	FALSE	canonical	3	227	junction_7	19.9335631229219	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTCTTAAGGTATCTTT	4660	False	NA	0	True	NA	NA	NA	34132005	34110780	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_34111729_34113189_34113265_34116351_34116394_34119264_34119403_34123529_34123656_34125316_34125388_34128507_34128631_34131877
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163722	chr8	-	205	1	Intergenic	novelGene_5012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCATATCTAAAGTTGCAT	5946	False	NA	NA	False	NA	NA	NA	34141096	34140891	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_34140900_34141100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163731	chr8	+	2470	13	FSM	ENSMUSG00000031584.17	ENSMUST00000033992.9	2673	13	204	-1	204	1	multi-exon	FALSE	canonical	3	1474	junction_4	147.314360580811	810	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTCAGTGTATTTTCT	606	False	NA	15	True	TATAAA	-18	NA	34143469	34188192	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_34143808_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163754	chr8	+	1597	8	FSM	ENSMUSG00000031585.14	ENSMUST00000167264.8	1566	8	-20	-11	-20	2	multi-exon	FALSE	canonical	3	804	junction_1	195.585463338633	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTTGTTTTAAAAAGCTA	5214	False	NA	20	True	AATAAA	-24	NA	34222049	34267203	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_34222158_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163791	chr8	+	197	1	Intergenic	novelGene_5013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGGTTCGAGGCCAGCCT	NA	False	NA	NA	False	NA	NA	NA	34422671	34422868	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_34422700_34422900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163800	chr8	+	178	1	Intergenic	novelGene_5014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTCTAAAAAATGACAAT	NA	False	NA	NA	False	NA	NA	NA	34439000	34439178	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_34439000_34439200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163812	chr8	-	236	1	Intergenic	novelGene_5015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTGCGACCATGAGTCA	NA	False	NA	NA	False	NA	NA	NA	34460780	34460544	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_34460500_34460800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163823	chr8	+	235	1	Intergenic	novelGene_5016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTCTTTTTTCTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	34533846	34534081	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_34533800_34534100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163834	chr8	-	930	7	FSM	ENSMUSG00000031516.12	ENSMUST00000033913.11	1249	7	322	-3	3	0	multi-exon	FALSE	canonical	3	293	junction_6	39.9485780584101	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGCCTCAATTTCCATT	NA	False	NA	0	True	AATAAA	-31	NA	34575628	34557573	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_34557997_34559664_34559808_34560782_34560831_34562037_34562127_34564342_34564449_34573495_34573561_34575572
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163844	chr8	-	2646	4	FSM	ENSMUSG00000031513.9	ENSMUST00000033910.9	2879	4	233	0	233	0	multi-exon	FALSE	canonical	3	354	junction_3	12.9614813968157	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTAGCTTGTGGGTGTTTT	9019	False	NA	-4	True	AATAAA	-16	NA	34613954	34602725	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_34604993_34606007_34606195_34607914_34607991_34613838
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163849	chr8	+	1893	6	FSM	ENSMUSG00000031532.8	ENSMUST00000239436.2	1897	6	6	-2	-6	2	multi-exon	FALSE	canonical	3	207	junction_1	37.2633868562695	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTGTTTCGTGTGTGGTTT	NA	False	NA	35	True	AATAAA	-42	NA	34621722	34638001	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_34621991_34628348_34628528_34632294_34632695_34634872_34635012_34635610_34635766_34637249
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163863	chr8	-	9179	27	FSM	ENSMUSG00000031529.6	ENSMUST00000033929.6	9163	27	-14	-2	-14	2	multi-exon	FALSE	canonical	3	108	junction_19	17.0294297993192	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTAGCATTCAGCTT	NA	False	NA	-15	True	AATAAA	-17	NA	35432858	35293611	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_35298876_35301591_35301749_35305537_35305725_35306041_35306148_35307121_35307197_35308906_35309005_35310068_35310190_35314434_35314518_35315735_35315974_35316306_35316496_35318251_35318362_35318767_35318988_35320377_35320544_35323081_35323228_35324607_35324688_35328668_35328841_35334434_35334514_35334847_35334940_35336625_35336748_35340181_35340369_35340756_35340824_35342367_35342463_35356829_35356906_35357657_35357695_35385532_35385629_35407849_35408075_35432167
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163891	chr8	-	178	1	Intergenic	novelGene_5017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAAAGAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	35863729	35863551	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_35863600_35863700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163899	chr8	-	4009	7	FSM	ENSMUSG00000031527.8	ENSMUST00000033927.8	5079	7	-2	1072	-2	-1072	multi-exon	FALSE	canonical	3	346	junction_2	28.274939827031	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTTTCTCTCCACTTC	NA	False	NA	2	True	ATTAAA	-22	NA	35962689	35933478	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_35936525_35941550_35941666_35943612_35943723_35945713_35945798_35949669_35949881_35958354_35958534_35962425
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163907	chr8	-	3755	12	FSM	ENSMUSG00000039633.8	ENSMUST00000239119.2	3930	12	178	-3	178	3	multi-exon	FALSE	canonical	3	80	junction_8	13.2583982428852	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCCCCCCTTTAAATCGT	NA	False	NA	1	True	AATAAA	-18	NA	36716492	36683214	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_36684756_36686979_36687133_36689769_36689933_36690017_36690177_36692710_36692833_36696289_36696405_36697234_36697332_36697436_36697678_36698191_36698342_36701053_36701177_36703142_36703262_36715720
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163921	chr8	-	188	1	Genic_Genomic	ENSMUSG00000031523.17	novel	NA	NA	NA	NA	9339	8	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATTGAATTTGCTTCTCT	NA	False	NA	-5	True	NA	NA	NA	37035084	37034896	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr8_-_37034900_37035100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163931	chr8	-	4895	6	ISM	ENSMUSG00000031523.17	ENSMUST00000033923.14	6159	14	36	12226	-33	-7832	5prime_fragment	TRUE	canonical	3	26	junction_4	7.49933330370107	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACACACATTCCTATGACA	NA	False	NA	NA	False	NA	NA	NA	37081061	37047130	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr8_-_37050032_37050694_37052122_37053829_37053894_37060530_37060613_37066522_37066595_37080712
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163937	chr8	-	182	1	Intergenic	novelGene_5018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAGACGAAGA	NA	False	NA	NA	False	NA	NA	NA	37103444	37103262	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_37103300_37103400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163945	chr8	+	1713	10	FSM	ENSMUSG00000118664.1	ENSMUST00000239508.1	2747	10	0	1034	0	178	multi-exon	FALSE	canonical	3	137	junction_1	15.2153269054433	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGTGTTTTGTTATTCT	NA	False	NA	16	True	TATAAA	-16	NA	39472998	39618333	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_39473355_39513668_39513839_39530344_39530463_39534775_39534917_39538529_39538671_39564078_39564169_39593682_39593747_39597896_39597972_39610300_39610392_39617866
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000163965	chr8	-	2606	7	FSM	ENSMUSG00000031601.17	ENSMUST00000034012.10	2615	7	10	-1	10	1	multi-exon	FALSE	canonical	3	422	junction_2	67.4388612003495	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGTGACTGATGGCTTT	NA	False	NA	0	True	AATAAA	-24	NA	40964785	40945579	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_40947157_40948845_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40964580
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164002	chr8	-	3459	14	FSM	ENSMUSG00000039431.17	ENSMUST00000048898.17	2488	14	-13	-958	0	952	multi-exon	TRUE	canonical	3	263	junction_13	15.5985130530912	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTAAAGTGTGAAAATTTT	NA	False	NA	0	True	AATAAA	-35	NA	41087832	41003183	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41087740
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164013	chr8	+	190	1	Intergenic	novelGene_5019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCAGTTGGGGCTGGAG	NA	False	NA	NA	False	NA	NA	NA	41400426	41400616	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_41400400_41400600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164020	chr8	+	153	1	Intergenic	novelGene_5020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGGGGATGAGTGGGGCCT	NA	False	NA	NA	False	NA	NA	NA	41415237	41415390	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_41415200_41415400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164025	chr8	-	6587	14	FSM	ENSMUSG00000045636.17	ENSMUST00000059115.13	6548	14	-37	-2	-37	2	multi-exon	TRUE	canonical	3	90	junction_13	16.5128603280297	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTCCTTGCTTTTGA	NA	False	NA	0	True	GATAAA	-23	NA	41586800	41443948	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586517
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164034	chr8	+	179	1	Intergenic	novelGene_5021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATTTACTTTTGCC	NA	False	NA	NA	False	NA	NA	NA	41593227	41593406	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_41593200_41593400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164045	chr8	+	6657	38	FSM	ENSMUSG00000031592.11	ENSMUST00000045218.9	6624	38	-33	0	-12	0	multi-exon	TRUE	canonical	3	55	junction_5	37.5002702692963	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTTTGGGAAATGTT	NA	False	NA	8	True	AATAAA	-20	NA	41692776	41785381	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164053	chr8	+	6619	38	ISM	ENSMUSG00000031592.11	ENSMUST00000211247.2	6484	39	-27	954	-1	-954	5prime_fragment	FALSE	canonical	3	93	junction_5	36.5724712558759	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAATGCTTTATGACTTT	NA	False	NA	26	True	AATAAA	-20	NA	41692787	41784175	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164084	chr8	-	2910	13	NIC	ENSMUSG00000031591.15	novel	2773	14	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	999	junction_6	172.755828813065	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGCAGTCATGCATGCT	7625	False	NA	-22	True	AATAAA	-17	NA	41827686	41793698	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807955_41813289_41813337_41827546
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164091	chr8	-	1099	9	FSM	ENSMUSG00000031590.9	ENSMUST00000033999.8	1039	9	-55	-5	-55	5	multi-exon	FALSE	canonical	3	814	junction_1	88.4737778949221	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCGAGTCCTTTTGAAA	NA	False	NA	-2	True	AATAAA	-28	NA	41870166	41850490	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_41850682_41851992_41852104_41852601_41852694_41853798_41853904_41860681_41860797_41863300_41863359_41864259_41864386_41867839_41867911_41869936
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164102	chr8	+	202	1	Intergenic	novelGene_5022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTCTTACATGGAATTT	NA	False	NA	NA	False	AAGAAA	-3	NA	43545352	43545554	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_43545400_43545600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164135	chr8	+	1562	9	FSM	ENSMUSG00000091490.4	ENSMUST00000210136.2	1552	9	-7	-3	-7	3	multi-exon	FALSE	canonical	3	91	junction_2	178.11092049619	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTCTCTGCATGTGTT	NA	False	NA	24	True	AATAAA	-15	NA	43633570	43646921	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_43633650_43635378_43635395_43636158_43636403_43636739_43636836_43638315_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164138	chr8	+	1550	8	NNC	ENSMUSG00000091490.4	novel	1552	9	NA	NA	-7	3	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	173.247021943365	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTCTCTGCATGTGTT	NA	False	NA	24	True	AATAAA	-15	NA	43633570	43646921	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_+_43633650_43636158_43636403_43636739_43636836_43638311_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164153	chr8	+	197	1	Intergenic	novelGene_5023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAAGGAAGGA	NA	False	NA	NA	False	NA	NA	NA	43698899	43699096	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_43698900_43699100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164156	chr8	-	2713	4	FSM	ENSMUSG00000051176.7	ENSMUST00000082120.5	1772	4	-87	-854	-87	850	multi-exon	FALSE	canonical	3	2952	junction_3	637.888356654639	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCATTTTTATTTCTA	NA	False	NA	-11	True	CATAAA	-20	NA	43760104	43747249	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_43749574_43753664_43753743_43757512_43757597_43759877
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164167	chr8	-	1705	5	NNC	ENSMUSG00000051176.7	novel	1772	4	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	3	230	junction_1	1663.49968064319	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGAGTTCAATTTCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	43760039	43748103	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_-_43749173_43749261_43749574_43753664_43753743_43757512_43757597_43759877
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164175	chr8	-	1790	4	NNC	ENSMUSG00000051176.7	novel	1772	4	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	3	109	junction_1	1739.84271319757	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGAGTTCAATTTCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	43760039	43748103	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_-_43749570_43753664_43753743_43757512_43757597_43759877
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164189	chr8	-	1828	4	NNC	ENSMUSG00000051176.7	novel	1772	4	NA	NA	1061	0	at_least_one_novel_splicesite	FALSE	canonical	3	231	junction_3	1920.37050823243	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGAGTTCAATTTCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	43758912	43748103	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_-_43749574_43753664_43753743_43757512_43757597_43758716
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164192	chr8	-	1792	4	FSM	ENSMUSG00000051176.7	ENSMUST00000209356.2	1744	4	-52	4	-22	0	multi-exon	FALSE	canonical	3	204	junction_3	1933.09774426667	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGAGTTCAATTTCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	43760039	43748103	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_43749574_43753664_43753743_43757512_43757595_43759877
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164214	chr8	+	185	1	Intergenic	novelGene_5024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAAAAGGTCTACAGAGT	NA	False	NA	NA	False	NA	NA	NA	43776970	43777155	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_43777000_43777200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164219	chr8	+	1176	5	Intergenic	novelGene_5025	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_4	30.1775993080961	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTATGGTTTTTTTT	NA	False	NA	19	True	AATAAA	-19	NA	43806963	43824716	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_43807132_43809132_43809201_43811094_43811168_43818030_43818205_43824023
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164231	chr8	+	219	1	Intergenic	novelGene_5026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTCCATGGCTATAATG	3050	False	NA	NA	False	NA	NA	NA	45787805	45788024	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_45787800_45788000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164246	chr8	-	3758	19	FSM	ENSMUSG00000038291.17	ENSMUST00000110378.9	3445	19	-313	0	-313	0	multi-exon	TRUE	canonical	3	42	junction_13	6.48288344625891	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTCAAAGGTATTATATG	NA	False	NA	NA	False	AATAAA	-19	NA	46605509	46486297	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_46486860_46487438_46487540_46488574_46488757_46491491_46491559_46494353_46494472_46497004_46497170_46498222_46498337_46500327_46500469_46502402_46502535_46507355_46507518_46508884_46509161_46511503_46511636_46521092_46521275_46533258_46533330_46556551_46556739_46558155_46558329_46569218_46569436_46577098_46577184_46604818
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164265	chr8	+	4579	5	FSM	ENSMUSG00000031631.16	ENSMUST00000034048.13	4619	5	36	4	-5	0	multi-exon	FALSE	canonical	3	40	junction_1	7.58287544405155	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTTTGATTCTGTTTT	NA	False	NA	14	True	AATAAA	-15	NA	46616723	46648623	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_46616787_46622595_46623690_46634754_46635024_46644616_46644768_46645621
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164274	chr8	-	1332	4	FSM	ENSMUSG00000031633.5	ENSMUST00000034049.5	1925	4	222	371	-32	-371	multi-exon	FALSE	canonical	3	7531	junction_1	145.363911156334	1264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCTGCCCTTATTAACT	NA	False	NA	NA	False	AATAAA	-20	NA	46664099	46660204	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_46660658_46661434_46661576_46662058_46662546_46663848
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164285	chr8	+	188	1	Intergenic	novelGene_5027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAGAAAACAGTCATG	NA	False	NA	NA	False	NA	NA	NA	46666120	46666308	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_46666100_46666300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164293	chr8	-	166	1	Intergenic	novelGene_5028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTTGAAAAAAAAAAAGA	3648	False	NA	NA	False	NA	NA	NA	46761412	46761246	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_46761200_46761400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164297	chr8	+	3904	21	FSM	ENSMUSG00000018796.14	ENSMUST00000034046.13	3897	21	-7	0	-7	0	multi-exon	FALSE	canonical	3	339	junction_9	34.1571368823559	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTCTTTCAAGTGCCTT	2199	False	NA	17	True	AATAAA	-26	NA	46924066	46989088	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_46924268_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164309	chr8	+	970	6	FSM	ENSMUSG00000031629.15	ENSMUST00000211217.2	997	6	10	17	-7	-17	multi-exon	FALSE	canonical	3	283	junction_2	30.0865418418269	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGTTCTTTTTAGAATGA	NA	False	NA	4	True	NA	NA	NA	47005082	47016017	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164324	chr8	-	2107	14	FSM	ENSMUSG00000038225.16	ENSMUST00000209787.2	1833	14	-8	-266	-4	266	multi-exon	FALSE	canonical	3	92	junction_6	19.6766764885012	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATGCCTGGTGATGACT	NA	False	NA	-4	True	ATTAAA	-19	NA	47070251	47031631	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164326	chr8	-	2093	14	NNC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	-4	266	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_6	35.660463247878	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATGCCTGGTGATGACT	NA	False	NA	-4	True	ATTAAA	-19	NA	47070251	47031631	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045641_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164334	chr8	+	2528	7	FSM	ENSMUSG00000031628.10	ENSMUST00000211115.2	2601	7	81	-8	-23	8	multi-exon	FALSE	canonical	3	221	junction_1	22.2816566310098	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGGTTTGTTGTTGTT	NA	False	NA	29	True	CATAAA	-25	NA	47070406	47092732	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_47070537_47082768_47082837_47085351_47085477_47087232_47087362_47088411_47088588_47089236_47089358_47090953
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164344	chr8	+	2486	7	FSM	ENSMUSG00000031628.10	ENSMUST00000093517.7	1520	7	6	-972	6	0	multi-exon	FALSE	canonical	3	47	junction_1	80.3189821205977	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTATTTGAGGGTTTG	NA	False	NA	21	True	CATAAA	-17	NA	47070435	47092724	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_47070532_47082768_47082837_47085351_47085477_47087232_47087362_47088411_47088588_47089236_47089358_47090953
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164357	chr8	-	196	1	Intergenic	novelGene_5029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGAATTATGGCATTTT	NA	False	NA	NA	False	TTTAAA	-3	NA	47788537	47788341	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_47788300_47788500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164366	chr8	-	189	1	Intergenic	novelGene_5030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAATACAAATACCTGTT	NA	False	NA	NA	False	NA	NA	NA	47826250	47826061	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_47826100_47826200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164373	chr8	-	4345	30	FSM	ENSMUSG00000038102.16	ENSMUST00000039061.15	4332	30	-24	11	-21	2	multi-exon	TRUE	canonical	3	87	junction_18	20.4181612288351	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCGTAAATACCTTTGG	4030	False	NA	-8	True	AATAAA	-18	NA	47986526	47943160	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_47943954_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966464_47966788_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164378	chr8	+	2947	7	NIC	ENSMUSG00000031568.17	novel	2921	8	NA	NA	-19	10	intron_retention	FALSE	canonical	0	0	junction_6	72.1795600491503	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTTGTTTCAAATCAC	NA	False	NA	17	True	AATAAA	-27	NA	47986679	48005870	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_47986979_47990313_47990395_47995726_47995837_47995916_47996065_47997145_47997264_48000823_48000874_48003729
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164399	chr8	-	3394	3	FSM	ENSMUSG00000038069.7	ENSMUST00000212175.2	3393	3	-1	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	31	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATTAGATGATTGGGTA	NA	False	NA	NA	False	AATAAA	-18	NA	48166967	48162479	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_48165330_48165922_48166054_48166554
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164400	chr8	-	3363	3	FSM	ENSMUSG00000038069.7	ENSMUST00000038738.7	3464	3	0	101	0	0	multi-exon	FALSE	canonical	3	60	junction_1	33.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATTAGATGATTGGGTA	NA	False	NA	NA	False	AATAAA	-18	NA	48166967	48162479	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_48165330_48165953_48166054_48166554
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164417	chr8	+	188	1	Intergenic	novelGene_5031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAAGAAGCTTTT	NA	False	NA	NA	False	AATAAA	-7	NA	48176118	48176306	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_48176100_48176300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164438	chr8	+	2099	6	FSM	ENSMUSG00000031562.17	ENSMUST00000170263.10	2096	6	-1	-2	-1	2	multi-exon	TRUE	canonical	3	319	junction_1	42.4480859403578	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTTTGCTTTTATATTTA	NA	False	NA	12	True	ATTAAA	-18	NA	48562991	48594702	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164460	chr8	-	8352	25	ISM	ENSMUSG00000031561.17	ENSMUST00000190840.8	8663	27	257438	-242	-117147	-2	3prime_fragment	FALSE	canonical	3	50	junction_6	12.0691727370005	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAACTGTGTGATTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	48870281	48680718	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr8_-_48682237_48685042_48685174_48688324_48689937_48693279_48693577_48707444_48707681_48709866_48710043_48729064_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164471	chr8	+	2257	2	ISM	ENSMUSG00000110013.2	ENSMUST00000210977.2	763	4	0	42639	0	-42639	5prime_fragment	FALSE	canonical	3	54	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCGTTTCTCGTGAGTGAT	NA	False	NA	23	True	NA	NA	NA	52809645	52813735	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr8_+_52809842_52811674
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164478	chr8	+	1280	9	FSM	ENSMUSG00000031521.6	ENSMUST00000033920.6	1181	9	-15	-84	-15	1	multi-exon	FALSE	canonical	3	314	junction_3	34.8440723079264	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGTCTACTTCCTTA	NA	False	NA	23	True	AATAAA	-17	NA	53964746	53976457	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_53964967_53966576_53966731_53967271_53967385_53968978_53969092_53970788_53970904_53971950_53972027_53973271_53973380_53974084_53974219_53976210
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164486	chr8	-	2192	10	FSM	ENSMUSG00000039396.12	ENSMUST00000047768.11	2253	10	61	0	-38	0	multi-exon	FALSE	canonical	3	23	junction_4	6.19039478985961	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTTTTGTAAGTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	54092039	54039901	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_54040363_54041959_54042135_54052133_54052555_54053985_54054156_54058667_54058835_54060362_54060438_54061749_54061964_54062438_54062574_54076652_54076778_54091790
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164541	chr8	+	1189	5	NNC	ENSMUSG00000054717.8	novel	2628	5	NA	NA	-69	1286	at_least_one_novel_splicesite	FALSE	canonical	3	1278	junction_1	2424.68941310016	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTTGTATTAATTTTT	NA	False	NA	10	True	AATAAA	-21	NA	57964871	57967529	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_+_57965040_57965612_57965783_57966095_57966242_57966323_57966499_57966999
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164542	chr8	+	2699	5	FSM	ENSMUSG00000054717.8	ENSMUST00000067925.8	2628	5	-69	-2	-69	2	multi-exon	FALSE	canonical	3	4513	junction_1	1044.37167114969	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGTTCTGTTTTGCTTTG	NA	False	NA	7	True	AAAACA	-19	NA	57964871	57969035	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_57965040_57965608_57965783_57966095_57966242_57966323_57966499_57966999
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164575	chr8	-	4339	12	FSM	ENSMUSG00000031608.14	ENSMUST00000034021.12	4313	12	-23	-3	-22	3	multi-exon	FALSE	canonical	3	53	junction_6	43.6895509190027	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCAGTGCTTGTAATT	NA	False	NA	0	True	AATAAA	-21	NA	58106088	57976858	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995545_57995729_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164576	chr8	-	4337	12	FSM	ENSMUSG00000031608.14	ENSMUST00000110316.3	3413	12	-49	-875	-20	3	multi-exon	FALSE	canonical	3	93	junction_6	28.2342620537355	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCAGTGCTTGTAATT	NA	False	NA	0	True	AATAAA	-21	NA	58106086	57976858	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995868_57996052_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164594	chr8	-	184	1	Intergenic	novelGene_5032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATGTACCTGTATCA	NA	False	NA	NA	False	NA	NA	NA	58214024	58213840	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_58213800_58214000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164606	chr8	+	205	1	Intergenic	novelGene_5033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGCGAATCGATCCATAC	7157	False	NA	NA	False	NA	NA	NA	61137694	61137899	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_61137700_61137900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164625	chr8	+	221	1	Intergenic	novelGene_5034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATGACTAGCATGA	NA	False	NA	NA	False	AATAAA	-19	NA	61356550	61356771	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_61356600_61356800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164660	chr8	+	5403	33	FSM	ENSMUSG00000031644.20	ENSMUST00000034065.14	5401	33	1	-3	1	3	multi-exon	TRUE	canonical	3	31	junction_16	13.1719028024618	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGTTGTCCTTATTGAC	NA	False	NA	12	True	NA	NA	NA	61446229	61584383	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_61446798_61459662_61459811_61460192_61460290_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61507553_61507657_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164679	chr8	+	193	1	Intergenic	novelGene_5035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACCGAATTTCAGACAGA	NA	False	NA	NA	False	NA	NA	NA	61530683	61530876	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_61530700_61530900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164690	chr8	+	206	1	Intergenic	novelGene_5036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGTGGGGGAAAGGTCGC	NA	False	NA	NA	False	NA	NA	NA	61879988	61880194	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_61880000_61880200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164728	chr8	+	190	1	Intergenic	novelGene_5037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATATATGCATATACATA	NA	False	NA	NA	False	NA	NA	NA	62803478	62803668	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_62803500_62803700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164741	chr8	-	2118	9	FSM	ENSMUSG00000037852.9	ENSMUST00000048967.9	2117	9	-1	0	-1	0	multi-exon	FALSE	canonical	3	35	junction_4	3.34477204006491	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGGTGTGCATTTCTC	NA	False	NA	NA	False	AATAAA	-20	NA	65146089	65045575	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_65046256_65047930_65048050_65050493_65050594_65059636_65059777_65062081_65062265_65064407_65064526_65070571_65070740_65072384_65072582_65145676
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164753	chr8	-	1875	6	FSM	ENSMUSG00000031604.11	ENSMUST00000034015.11	2044	6	170	-1	-41	1	multi-exon	TRUE	canonical	3	690	junction_2	21.3822356174466	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGGTTCTGTTTTTTCCT	NA	False	NA	-16	True	AATAAA	-2	NA	65186656	65171171	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_65172216_65173375_65173531_65175497_65175625_65176621_65176771_65180657_65180943_65186541
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164757	chr8	-	1552	4	NIC	ENSMUSG00000031604.11	novel	2044	6	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	338.098933581413	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATGGTTCTGTTTTTTCC	NA	False	NA	-17	True	AATAAA	-1	NA	65186610	65171172	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_65172216_65173375_65173531_65180657_65180943_65186541
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164763	chr8	+	199	1	Antisense	novelGene_ENSMUSG00000031604.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTCTTGGTAGCTGGTGA	NA	False	NA	NA	False	NA	NA	NA	65179816	65180015	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr8_+_65179800_65180000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164779	chr8	+	204	1	Intergenic	novelGene_5038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAACCACACCCAATGTG	NA	False	NA	NA	False	NA	NA	NA	65208483	65208687	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_65208500_65208700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164792	chr8	-	178	1	Intergenic	novelGene_5039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAAAAAAACCTT	NA	False	NA	NA	False	NA	NA	NA	65477321	65477143	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_65477100_65477300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164801	chr8	-	937	3	FSM	ENSMUSG00000079042.11	ENSMUST00000124790.8	945	3	11	-3	11	0	multi-exon	FALSE	canonical	3	429	junction_2	5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGAGTTTATTGTGTGT	NA	False	NA	-21	True	ATTAAA	-21	NA	65489813	65481068	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_65481644_65488316_65488407_65489541
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164806	chr8	+	181	1	Intergenic	novelGene_5040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAGTGACAAATCT	NA	False	NA	NA	False	NA	NA	NA	65484215	65484396	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_65484200_65484400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164812	chr8	+	213	1	Intergenic	novelGene_5041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTTTTATTAAAATTTT	NA	False	NA	NA	False	AAAAAG	-17	NA	65511972	65512185	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_65512000_65512200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164830	chr8	-	2516	6	NIC	ENSMUSG00000025591.7	novel	3150	7	NA	NA	0	-2116	intron_retention	FALSE	canonical	3	740	junction_4	84.295670114188	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAGAATTTGCTATTGAA	NA	False	NA	-6	True	AATAAA	-24	NA	66939173	66929097	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66936823_66939063
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164846	chr8	+	203	1	Intergenic	novelGene_5042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAATTTCCTGGTCATCG	NA	False	NA	NA	False	NA	NA	NA	67166319	67166522	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_67166300_67166500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164859	chr8	+	210	1	Intergenic	novelGene_5043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGCTCCAACCCAAGAAA	NA	False	NA	NA	False	NA	NA	NA	68510812	68511022	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_68510800_68511000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164870	chr8	+	185	1	Intergenic	novelGene_5044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTAAATGTCTCAAATAA	NA	False	NA	NA	False	NA	NA	NA	68959194	68959379	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_68959200_68959400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164878	chr8	+	2452	17	FSM	ENSMUSG00000031864.17	ENSMUST00000034328.13	4201	17	17	1732	-10	177	multi-exon	FALSE	canonical	3	438	junction_4	79.6960779696843	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGTACATTTGTCTTCT	NA	False	NA	47	True	TTTAAA	-24	NA	69246597	69280330	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164887	chr8	+	2427	17	NNC	ENSMUSG00000031864.17	novel	4201	17	NA	NA	1	160	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_9	163.936296697833	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTTTAGTTTCAAGTA	NA	False	NA	30	True	AATAAA	-32	NA	69246608	69280313	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263227_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164899	chr8	+	2150	10	FSM	ENSMUSG00000015568.17	ENSMUST00000015712.15	4115	10	64	1901	0	-1901	multi-exon	TRUE	canonical	3	87	junction_5	14.4871164560059	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACCAGGAACGTGTGACT	NA	False	NA	NA	False	NA	NA	NA	69333206	69357685	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_69333493_69340094_69340256_69345246_69345427_69347278_69347391_69348313_69348548_69349250_69349494_69352068_69352190_69353799_69353983_69354935_69355038_69357157
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164907	chr8	+	2809	14	FSM	ENSMUSG00000006273.15	ENSMUST00000006435.8	2825	14	23	-7	23	7	multi-exon	TRUE	canonical	3	1214	junction_12	88.1479391228044	415	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTCTGTGTTTTCTCTCG	NA	False	NA	25	True	AATAAA	-29	NA	69541320	69566370	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_69541581_69548871_69548928_69554016_69554116_69554587_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164920	chr8	-	173	1	Intergenic	novelGene_5045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTTTGGTAATGCTATT	NA	False	NA	NA	False	NA	NA	NA	69644580	69644407	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_69644400_69644600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164928	chr8	+	2976	4	FSM	ENSMUSG00000059897.6	ENSMUST00000212681.2	3001	4	25	0	15	0	multi-exon	FALSE	canonical	3	90	junction_1	2.49443825784929	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGACCCTTGTCCTGTA	7225	False	NA	27	True	AATAAA	-18	NA	69661714	69683188	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_69661812_69678994_69679122_69679323_69679382_69680494
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164952	chr8	-	185	1	Intergenic	novelGene_5046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAGAAGAGAACAGAGAG	7902	False	NA	NA	False	NA	NA	NA	70131328	70131143	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_70131100_70131300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164957	chr8	-	3174	5	FSM	ENSMUSG00000054648.9	ENSMUST00000238418.2	3180	5	1	5	-1	-2	multi-exon	FALSE	canonical	3	68	junction_4	9.33742469849155	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTGCTTTGTCAATGT	NA	False	NA	-5	True	NA	NA	NA	70169551	70157791	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_70160345_70160760_70160822_70160988_70161116_70163335_70163635_70169417
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164973	chr8	+	3856	26	FSM	ENSMUSG00000031862.12	ENSMUST00000034326.7	3915	26	59	0	-28	0	multi-exon	TRUE	canonical	3	203	junction_10	47.3625337160081	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	9223	False	NA	NA	False	AATAAA	-23	NA	70243871	70260399	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251164_70251233_70251372_70251461_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164985	chr8	+	3848	25	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-20	0	intron_retention	FALSE	canonical	3	87	junction_12	60.2107410129898	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	9231	False	NA	NA	False	AATAAA	-23	NA	70243879	70260399	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164995	chr8	+	3907	25	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-13	0	intron_retention	FALSE	canonical	3	223	junction_12	42.3897262186121	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTTGCTGCCACTTAT	9238	False	NA	NA	False	AATAAA	-19	NA	70243886	70260395	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000164999	chr8	+	3839	25	NNC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-11	0	intron_retention	FALSE	canonical	3	21	junction_8	83.8768939180114	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTTGCTGCCACTTAT	9240	False	NA	NA	False	AATAAA	-19	NA	70243888	70260395	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250491_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165000	chr8	+	3769	26	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_13	62.842609748482	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	9240	False	NA	NA	False	AATAAA	-23	NA	70243888	70260399	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251164_70251233_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165015	chr8	+	187	1	Intergenic	novelGene_5047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAAACTGCAATGACCTT	4251	False	NA	NA	False	NA	NA	NA	70307033	70307220	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_70307000_70307200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165021	chr8	-	528	4	ISM	ENSMUSG00000036199.10	ENSMUST00000110167.5	1251	5	888	-17	888	17	3prime_fragment	FALSE	canonical	3	6124	junction_2	115.905133622286	550	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTATCGTGGATCCTTAAT	NA	False	NA	-3	True	AATAAA	-34	NA	70354320	70346812	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr8_-_70347061_70347153_70347226_70347891_70347971_70354191
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165077	chr8	-	3499	12	NIC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	49	0	combination_of_known_splicesites	FALSE	canonical	3	148	junction_2	348.613831202643	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70448985	70361305	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165079	chr8	-	3495	13	FSM	ENSMUSG00000036180.16	ENSMUST00000065169.12	3812	13	131	186	-20	0	multi-exon	FALSE	canonical	3	188	junction_6	322.35922853584	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70448903	70361305	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369102_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165086	chr8	-	3487	13	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-121	0	combination_of_known_junctions	FALSE	canonical	3	188	junction_6	285.503308017418	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70427042	70361305	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369102_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165096	chr8	-	3487	13	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-115	0	combination_of_known_junctions	FALSE	canonical	3	132	junction_6	298.384399726259	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70427036	70361305	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165132	chr8	+	193	1	Intergenic	novelGene_5048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAAGTTTTTTGTTGTTGT	7223	False	NA	NA	False	NA	NA	NA	70384037	70384230	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_70384000_70384200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165141	chr8	+	202	1	Intergenic	novelGene_5049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGTGCACCACCAGGTGC	7548	False	NA	NA	False	NA	NA	NA	70384362	70384564	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_70384400_70384600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165145	chr8	-	167	1	Intergenic	novelGene_5050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCTAAGTGTGATCCAA	6439	False	NA	NA	False	NA	NA	NA	70433145	70432978	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_70433000_70433100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165155	chr8	+	181	1	Intergenic	novelGene_5051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACAAAATATATTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	70460475	70460656	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_70460500_70460700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165201	chr8	+	161	1	Intergenic	novelGene_5052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAACTAAGCCGGG	648	False	NA	NA	False	NA	NA	NA	70580507	70580668	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_70580500_70580700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165221	chr8	+	764	4	FSM	ENSMUSG00000002345.19	ENSMUST00000123976.2	756	4	6	-14	0	0	multi-exon	FALSE	canonical	3	180	junction_1	5.79271573232759	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCCTTTGACCAGTCTG	8827	False	NA	25	True	AATAAA	-25	NA	70592362	70598199	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165233	chr8	+	1364	9	FSM	ENSMUSG00000079033.11	ENSMUST00000110146.9	1342	9	-17	-5	-17	5	multi-exon	FALSE	canonical	3	100	junction_6	49.3303595669036	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTCAAAGATCTCTTTT	8572	False	NA	10	True	NA	NA	NA	70605410	70620143	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_70605495_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619077_70619263_70619349_70619468_70619557_70619715
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165239	chr8	+	1329	9	FSM	ENSMUSG00000079033.11	ENSMUST00000110143.8	1312	9	-17	0	-17	0	multi-exon	TRUE	canonical	3	113	junction_6	45.467021015237	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAATCTCCTCAAAGATCT	8572	False	NA	5	True	NA	NA	NA	70605410	70620138	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_70605495_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619047_70619263_70619349_70619468_70619557_70619715
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165265	chr8	+	199	1	Intergenic	novelGene_5053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	638	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTGAGTGCTATATCTT	NA	False	NA	39	True	NA	NA	NA	70632066	70632265	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_70632100_70632300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165283	chr8	+	3614	12	NIC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_10	11.7353742277127	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1446	False	NA	26	True	AATAAA	-17	NA	70687229	70715755	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713240_70713880_70713968_70715520
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165303	chr8	+	2445	10	FSM	ENSMUSG00000003573.16	ENSMUST00000110124.9	2445	10	-6	6	-6	2	multi-exon	FALSE	canonical	3	142	junction_9	38.9171326009065	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGAGATCTGGCTCCCTG	NA	False	NA	NA	False	AATAAA	-19	NA	70735642	70747005	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166_70744254_70745624
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165319	chr8	-	2150	13	FSM	ENSMUSG00000057788.14	ENSMUST00000008004.10	2137	13	-13	0	-13	0	multi-exon	TRUE	canonical	3	250	junction_9	19.6148682268211	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGAATCCAATAGCTAC	9918	False	NA	-24	True	NA	NA	NA	70755152	70745515	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_70746338_70746477_70746550_70746648_70746738_70747336_70747412_70748016_70748115_70748224_70748302_70749032_70749109_70749552_70749694_70749780_70749969_70750525_70750648_70750730_70750817_70753628_70753753_70754972
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165337	chr8	+	1123	9	ISM	ENSMUSG00000055681.15	ENSMUST00000066469.14	1300	10	255	0	0	0	intron_retention	FALSE	canonical	3	1246	junction_3	46.5025200930014	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	707	False	NA	26	True	AATAAA	-15	NA	70755422	70765640	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr8_+_70755583_70757283_70757347_70758284_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165353	chr8	-	4666	24	FSM	ENSMUSG00000058301.9	ENSMUST00000075666.8	4618	24	-45	-3	-45	3	multi-exon	TRUE	canonical	0	0	junction_1	146.934304983882	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTTTTGCGTGGGGCGG	NA	False	NA	-26	True	AATAAA	-17	NA	70805973	70784171	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792631_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165377	chr8	-	190	1	Intergenic	novelGene_5054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGACAATCCATGCATGTT	NA	False	NA	NA	False	NA	NA	NA	70821378	70821188	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_70821200_70821400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165399	chr8	-	671	5	FSM	ENSMUSG00000058833.12	ENSMUST00000075175.12	671	5	0	0	0	0	multi-exon	FALSE	canonical	3	754	junction_4	53.0518614188041	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCCCATCAGCTCTGTA	NA	False	NA	-8	True	AATAAA	-17	NA	70959402	70956944	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_70957160_70957633_70957711_70958405_70958611_70959146_70959230_70959311
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165411	chr8	-	1474	4	FSM	ENSMUSG00000090137.9	ENSMUST00000125184.8	711	4	163	-926	-1	926	multi-exon	FALSE	canonical	3	14257	junction_3	3914.7897346686	2687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTGATGGGCATGGTGGT	NA	False	NA	NA	False	NA	NA	NA	70963068	70959986	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_70961179_70961945_70962033_70962170_70962285_70962987
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165420	chr8	-	1200	3	FSM	ENSMUSG00000090137.9	ENSMUST00000124967.2	611	3	-422	-167	12	0	multi-exon	FALSE	canonical	3	22365	junction_1	190	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTCTAGAGTGACTGT	NA	False	NA	-4	True	AATAAA	-28	NA	70963017	70960912	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_70961179_70961945_70962033_70962170
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165424	chr8	-	717	4	FSM	ENSMUSG00000090137.9	ENSMUST00000129909.8	705	4	-12	0	12	0	multi-exon	FALSE	canonical	0	0	junction_3	10633.6606532694	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTCTAGAGTGACTGT	NA	False	NA	-4	True	AATAAA	-28	NA	70963017	70960912	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_70961179_70961945_70962033_70962170_70962285_70962767
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165430	chr8	-	544	4	FSM	ENSMUSG00000090137.9	ENSMUST00000081940.11	541	4	0	-3	0	0	multi-exon	FALSE	canonical	3	1892	junction_3	9741.86690983247	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTCTAGAGTGACTGT	NA	False	NA	-4	True	AATAAA	-28	NA	70963067	70960912	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_70961179_70961945_70962033_70962170_70962282_70962987
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165466	chr8	-	681	1	ISM	ENSMUSG00000055553.17	ENSMUST00000093456.12	1216	5	9104	0	9014	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTATAGCAACAGTGGCT	NA	False	NA	-13	True	AATAAA	-20	NA	70966726	70966045	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr8_-_70966000_70966700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165478	chr8	+	201	1	Intergenic	novelGene_5055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGTGATGCTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70969772	70969973	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_70969800_70970000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165486	chr8	+	1713	9	FSM	ENSMUSG00000019428.17	ENSMUST00000119353.9	1720	9	7	0	7	0	multi-exon	FALSE	canonical	0	0	junction_1	528.343741682439	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	False	NA	27	True	AATAAA	-19	NA	70980380	70987978	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984174_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165494	chr8	+	1958	8	ISM	ENSMUSG00000019428.17	ENSMUST00000075491.14	1698	9	-6	-2	-6	0	intron_retention	FALSE	canonical	0	0	junction_1	458.365107123755	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	False	NA	27	True	AATAAA	-19	NA	70980390	70987978	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165534	chr8	+	1651	9	FSM	ENSMUSG00000019428.17	ENSMUST00000119698.8	1799	9	149	-1	-14	0	multi-exon	FALSE	canonical	3	550	junction_1	286.852068800279	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	False	NA	27	True	AATAAA	-19	NA	70980644	70987978	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_70980686_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165572	chr8	+	1904	10	FSM	ENSMUSG00000019139.11	ENSMUST00000210878.2	1916	10	15	-3	15	1	multi-exon	FALSE	canonical	3	300	junction_1	45.5894183087303	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTTGTGTGCTTTTTCC	NA	False	NA	21	True	AATAAA	-17	NA	71047154	71049941	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_71047194_71047269_71047399_71047472_71047635_71047788_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165575	chr8	-	1486	17	FSM	ENSMUSG00000070003.8	ENSMUST00000049908.11	1475	17	-3	-8	-3	8	multi-exon	TRUE	canonical	3	428	junction_1	289.200298236361	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGATGTCTTTTACTTG	NA	False	NA	-2	True	AATAAA	-25	NA	71060967	71050131	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165598	chr8	-	1809	15	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	6	intron_retention	FALSE	canonical	3	981	junction_3	172.790615887482	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTGATGTCTTTTACT	NA	False	NA	-4	True	AATAAA	-23	NA	71060964	71050133	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165613	chr8	-	1559	16	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	428	junction_1	272.959695844562	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	71060964	71050139	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165614	chr8	-	1591	17	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_1	351.765524710708	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	71060964	71050139	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_71050419_71050546_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165633	chr8	-	186	1	Intergenic	novelGene_5056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTACTTTATAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	71072986	71072800	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_71072800_71073000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165640	chr8	-	1369	4	NNC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	-151	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_3	120.610484158256	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	503	False	NA	-6	True	AATAAA	-18	NA	71085257	71082042	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_-_71082825_71083982_71084242_71084799_71085030_71085159
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165641	chr8	-	1272	3	NNC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	76	0	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_2	115.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	730	False	NA	-6	True	AATAAA	-18	NA	71085030	71082042	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_-_71082825_71083982_71084242_71084799
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165650	chr8	-	1088	2	FSM	ENSMUSG00000038508.8	ENSMUST00000003808.8	1545	2	457	0	457	0	multi-exon	FALSE	canonical	3	308	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	1472	False	NA	-6	True	AATAAA	-18	NA	71084288	71082042	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_71082825_71083982
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165662	chr8	+	199	1	Intergenic	novelGene_5057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGTGTTCCTCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	71088688	71088887	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_71088700_71088900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165697	chr8	+	1685	1	FSM	ENSMUSG00000071076.9	ENSMUST00000095267.8	1667	1	-17	-1	-17	1	mono-exon	FALSE	NA	NA	NA	NA	NA	341	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTGTCCGCCTCCTTC	NA	False	NA	35	True	AGTAAA	-17	NA	71151581	71153266	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_71151600_71153300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165709	chr8	+	1340	5	FSM	ENSMUSG00000031840.15	ENSMUST00000034301.12	1363	5	-8	31	0	-31	multi-exon	FALSE	canonical	3	41	junction_1	7.43303437365925	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTCTGCTGGCCCAGCC	NA	False	NA	15	True	AATAAA	-15	NA	71207351	71211250	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_71207513_71208502_71208731_71209093_71209213_71209783_71209909_71210543
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165715	chr8	-	1018	5	FSM	ENSMUSG00000035559.10	ENSMUST00000038626.10	980	5	-35	-3	-35	3	multi-exon	FALSE	canonical	3	649	junction_3	27.2304976083802	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGTGGGTGGGTTCAG	NA	False	NA	1	True	ATTAAA	-20	NA	71213627	71211291	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_71211671_71211754_71211884_71212036_71212114_71213013_71213185_71213365
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165721	chr8	-	1010	5	NNC	ENSMUSG00000035559.10	novel	980	5	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_3	276.99311814556	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTGCGTGTGGGTGGGTT	NA	False	NA	-2	True	ATTAAA	-17	NA	71213581	71211294	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_-_71211671_71211754_71211884_71212036_71212155_71213013_71213185_71213365
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165729	chr8	-	1007	7	FSM	ENSMUSG00000031838.11	ENSMUST00000222087.4	980	7	-11	-16	-11	16	multi-exon	FALSE	canonical	3	181	junction_6	19.0065778087482	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGAGTTTGTGTTTTTGT	NA	False	NA	1	True	AATAAA	-34	NA	71219318	71215402	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_71215686_71215772_71215827_71216371_71216525_71217191_71217285_71217363_71217439_71217563_71217747_71219152
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165739	chr8	-	3166	16	FSM	ENSMUSG00000031834.16	ENSMUST00000034296.15	3165	16	-3	2	-3	-2	multi-exon	TRUE	canonical	3	127	junction_15	21.8259784049498	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTGTCTTTGGGGACT	NA	False	NA	-10	True	NA	NA	NA	71229360	71220821	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227299_71227997_71229250
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165751	chr8	-	167	1	Intergenic	novelGene_5058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAATAAACCTTAAAG	8560	False	NA	NA	False	NA	NA	NA	71264587	71264420	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_71264400_71264600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165755	chr8	-	2170	8	FSM	ENSMUSG00000002910.12	ENSMUST00000002989.11	2355	8	186	-1	-16	1	multi-exon	FALSE	canonical	0	0	junction_5	35.6330504688314	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCGTCTTTTCATTTGT	NA	False	NA	0	True	AATAAA	-21	NA	71292178	71287771	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_71288639_71288863_71289022_71289501_71289665_71289753_71290011_71290087_71290191_71291337_71291486_71291622_71291690_71291771
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165774	chr8	-	915	5	FSM	ENSMUSG00000007721.7	ENSMUST00000007865.7	1356	5	442	-1	-110	1	multi-exon	FALSE	canonical	3	353	junction_4	97.9030132324843	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCATGTCTGTATGTGTGG	NA	False	NA	-4	True	AATAAA	-19	NA	71326137	71320869	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_71321290_71321380_71321496_71321576_71321752_71322548_71322719_71326102
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165785	chr8	-	642	5	FSM	ENSMUSG00000045128.10	ENSMUST00000054220.10	1260	5	-38	656	-38	1	multi-exon	FALSE	canonical	3	16397	junction_4	7934.97659101777	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTGTTTGCTTCTATGT	NA	False	NA	-14	True	AATAAA	-16	NA	71350094	71348021	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_71348152_71348243_71348354_71348559_71348690_71348776_71348957_71350002
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165791	chr8	-	629	5	FSM	ENSMUSG00000045128.10	ENSMUST00000213053.2	576	5	-17	-36	0	0	multi-exon	FALSE	canonical	3	63	junction_4	13769.0618144447	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350056	71348022	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_71348152_71348243_71348354_71348559_71348690_71348776_71348957_71349976
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165795	chr8	-	809	4	FSM	ENSMUSG00000045128.10	ENSMUST00000212019.2	795	4	-14	0	0	0	multi-exon	FALSE	canonical	3	16397	junction_3	7846.8208565989	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350056	71348022	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_71348152_71348243_71348690_71348776_71348957_71350002
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165801	chr8	+	3289	7	FSM	ENSMUSG00000019261.4	ENSMUST00000019405.4	3314	7	27	-2	-23	0	multi-exon	FALSE	canonical	3	269	junction_1	20.5236990384829	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTTACTGTCTTAT	NA	False	NA	15	True	AATAAA	-15	NA	71358602	71370173	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_71358772_71363588_71363694_71364489_71364573_71365156_71365298_71365549_71367639_71368994_71369219_71369695
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165813	chr8	+	194	1	Intergenic	novelGene_5059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTAAGATTACAATTGTT	NA	False	NA	NA	False	NA	NA	NA	71391882	71392076	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_71391900_71392100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165822	chr8	-	2115	11	FSM	ENSMUSG00000035439.14	ENSMUST00000035960.13	2013	11	428	-530	-28	530	multi-exon	FALSE	canonical	3	458	junction_6	24.6578587878185	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTTCTTGGTCATGAAG	566	False	NA	-1	True	NA	NA	NA	71725150	71703238	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71721869_71721929_71724927
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165834	chr8	-	1581	11	FSM	ENSMUSG00000035439.14	ENSMUST00000110071.3	1452	11	-128	-1	-26	1	multi-exon	FALSE	canonical	3	71	junction_7	129.467524885587	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGTGTGATGCGTTTGT	568	False	NA	-8	True	NA	NA	NA	71725148	71703767	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709196_71709999_71710070_71715695_71715749_71721869_71721929_71724927
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165837	chr8	-	1522	10	NIC	ENSMUSG00000035439.14	novel	2013	11	NA	NA	-26	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	153.13787864713	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTACAGTGTGATGCGTT	568	False	NA	-11	True	NA	NA	NA	71725148	71703770	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71724927
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165843	chr8	+	995	9	FSM	ENSMUSG00000002395.15	ENSMUST00000110054.8	973	9	-23	1	-23	-1	multi-exon	FALSE	canonical	3	188	junction_1	224.605626599157	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATGTCTTCAGTGCTA	NA	False	NA	21	True	AATAAA	-22	NA	71819562	71822375	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_71819723_71819878_71820014_71820287_71820338_71820413_71820493_71820602_71820756_71821193_71821207_71821493_71821522_71821775_71821948_71822170
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165854	chr8	+	854	8	FSM	ENSMUSG00000002395.15	ENSMUST00000019169.8	854	8	-1	1	-1	-1	multi-exon	FALSE	canonical	3	608	junction_1	107.997165495683	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATGTCTTCAGTGCTA	NA	False	NA	21	True	AATAAA	-22	NA	71819859	71822375	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_71820014_71820287_71820338_71820413_71820493_71820602_71820756_71821193_71821207_71821493_71821522_71821775_71821948_71822170
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165870	chr8	+	750	7	ISM	ENSMUSG00000002395.15	ENSMUST00000019169.8	854	8	377	1	-47	-1	3prime_fragment	FALSE	canonical	3	658	junction_5	82.6975748670352	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATGTCTTCAGTGCTA	NA	False	NA	21	True	AATAAA	-22	NA	71820237	71822375	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr8_+_71820338_71820413_71820493_71820602_71820756_71821193_71821207_71821493_71821522_71821775_71821948_71822170
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165875	chr8	-	2233	4	FSM	ENSMUSG00000002393.15	ENSMUST00000002466.9	2218	4	-6	-9	-6	5	multi-exon	FALSE	canonical	3	125	junction_2	9.56846672960488	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGCTTTCTTCTGCAG	NA	False	NA	1	True	AATAAA	-21	NA	71834610	71826761	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_71827399_71828392_71828918_71831032_71831128_71833634
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165892	chr8	+	1362	9	FSM	ENSMUSG00000031820.10	ENSMUST00000002473.10	1433	9	2	69	2	-69	multi-exon	FALSE	canonical	3	269	junction_4	29.4573314303927	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGTGTCACTTTGGGC	NA	False	NA	20	True	AATAAA	-22	NA	71849506	71857194	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_71849665_71850322_71850670_71851035_71851095_71852169_71852291_71852372_71852452_71854323_71854349_71855389_71855520_71855619_71855707_71856838
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165917	chr8	+	645	2	FSM	ENSMUSG00000034880.8	ENSMUST00000048914.8	607	2	-32	-6	-32	6	multi-exon	FALSE	canonical	3	904	junction_1	0	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTATGTATTAACTTACAGT	8888	False	NA	24	True	AATAAA	-24	NA	71917570	71918397	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_71917712_71917893
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165926	chr8	+	1947	5	FSM	ENSMUSG00000074247.11	ENSMUST00000124745.8	1933	5	-13	-1	-13	1	multi-exon	FALSE	canonical	2	515	junction_4	131.476946648452	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGTGTATTTTTCTGT	NA	False	NA	14	True	NA	NA	NA	71921829	71928743	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_71921970_71924680_71924762_71924838_71924891_71926418_71926481_71927131
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165952	chr8	+	2058	9	FSM	ENSMUSG00000007610.16	ENSMUST00000007754.13	2800	9	620	122	2	-122	multi-exon	FALSE	canonical	0	0	junction_4	23.9892554073694	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTAGTAGCATGTGGT	NA	False	NA	17	True	ATTAAA	-19	NA	71941366	71945922	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_71941485_71941714_71941963_71942071_71942159_71942978_71943182_71943538_71943612_71943709_71943854_71944068_71944235_71944720_71945000_71945182
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000165981	chr8	+	3348	13	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	1	37	junction_11	40.1631222502545	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGCCAGAGCACAGCGT	NA	False	NA	20	True	AATAAA	-16	NA	72022323	72039947	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_72022486_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166005	chr8	+	903	5	FSM	ENSMUSG00000031807.11	ENSMUST00000034264.11	893	5	-10	0	-10	0	multi-exon	FALSE	canonical	3	546	junction_2	58.7132864009502	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTGTTTCTGTGGTTCTT	NA	False	NA	15	True	ATTAAA	-15	NA	72044809	72048913	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_72045149_72046727_72046836_72047312_72047415_72047704_72047846_72048700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166016	chr8	+	4999	12	FSM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	109	-1901	-64	1901	multi-exon	FALSE	canonical	3	748	junction_9	75.1827525499814	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCAAAATAGTGCAAAACAT	NA	False	NA	NA	False	AATAAA	-24	NA	72063750	72079456	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075941_72076136
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166022	chr8	+	3881	11	NIC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-41	0	intron_retention	FALSE	canonical	3	838	junction_7	59.7648726259832	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGGGTTTGGTGCCCC	NA	False	NA	30	True	ATTAAA	-22	NA	72063773	72077555	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72075475_72075733_72075941_72076136
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166061	chr8	-	2649	3	NNC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	-1743	-453	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	71.5	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGGTAATATTTCTGTTTT	6778	False	NA	-2	True	NA	NA	NA	72156176	72143852	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_-_72145800_72145960_72146544_72156057
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166084	chr8	+	2839	3	NIC	ENSMUSG00000066880.16	novel	2920	4	NA	NA	21	1	combination_of_known_splicesites	FALSE	canonical	2	14	junction_2	30	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGTTCTATTGCTGTG	NA	False	NA	30	True	AATAAA	-18	NA	72676716	72688474	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_72676817_72682045_72682173_72685862
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166099	chr8	+	2652	3	FSM	ENSMUSG00000052446.18	ENSMUST00000136516.9	601	3	4	-2055	0	0	multi-exon	FALSE	canonical	3	96	junction_2	182.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72704914	72724177	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_72705005_72719637_72719765_72721742
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166124	chr8	+	2863	4	FSM	ENSMUSG00000052446.18	ENSMUST00000151168.2	698	4	-8	-2157	-8	0	multi-exon	FALSE	canonical	3	39	junction_1	148.102066907327	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72707282	72724177	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_72707523_72719637_72719765_72719943_72720005_72721742
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166149	chr8	+	2018	8	FSM	ENSMUSG00000031799.11	ENSMUST00000238492.2	2044	8	26	0	26	0	multi-exon	FALSE	canonical	3	103	junction_1	228.433708510092	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGGATTTATTCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	72889677	72906984	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_72889765_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166167	chr8	+	1602	4	FSM	ENSMUSG00000003039.10	ENSMUST00000003123.10	2564	4	-7	969	-7	19	multi-exon	FALSE	canonical	3	920	junction_3	34.4705993887867	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATATATGAGATTTACTT	NA	False	NA	37	True	AATATA	-33	NA	72973566	72977293	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_72973705_72973784_72973927_72975771_72975826_72976025
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166175	chr8	+	2064	12	FSM	ENSMUSG00000003033.16	ENSMUST00000003117.15	2084	12	20	0	-8	0	multi-exon	FALSE	canonical	3	513	junction_9	40.3802177244139	391	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTCTTCTCTCTGTGT	NA	False	NA	19	True	ATTAAA	-20	NA	72993881	73011229	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_72994088_73000482_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005586_73005714_73006678_73006822_73007052_73007125_73007318_73007478_73009540_73009667_73009950_73010027_73010578
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166189	chr8	+	347	1	Intergenic	novelGene_5060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	577	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAAACATTTTTTTAAA	NA	False	NA	NA	False	AATAAA	-11	NA	73031870	73032217	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_73031900_73032200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166196	chr8	+	195	1	Intergenic	novelGene_5061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTATCCCCTGCCTGTG	NA	False	NA	NA	False	NA	NA	NA	73052047	73052242	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_73052000_73052200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166200	chr8	-	468	1	FSM	ENSMUSG00000070713.6	ENSMUST00000075602.8	1151	1	-18	701	-18	-701	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTAAGCTAT	NA	False	NA	NA	False	TATAAA	-21	NA	73059122	73058654	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_73058700_73059100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166218	chr8	+	2014	2	ISM	ENSMUSG00000055148.8	ENSMUST00000067912.8	1847	3	29	305	29	-305	intron_retention	FALSE	canonical	3	2987	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGGTAGTGGTGTGGCTG	NA	False	NA	34	True	ATTAAA	-21	NA	73072905	73075195	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr8_+_73072994_73073269
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166220	chr8	+	696	2	NIC	ENSMUSG00000055148.8	novel	1847	3	NA	NA	29	-305	combination_of_known_splicesites	FALSE	canonical	3	215	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGGTAGTGGTGTGGCTG	NA	False	NA	34	True	ATTAAA	-21	NA	73072905	73075195	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_73072994_73074587
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166222	chr8	+	1789	2	NIC	ENSMUSG00000055148.8	novel	1847	3	NA	NA	29	-305	intron_retention	FALSE	canonical	3	2955	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGGTAGTGGTGTGGCTG	NA	False	NA	34	True	ATTAAA	-21	NA	73072905	73075195	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_73074087_73074587
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166243	chr8	-	3139	24	FSM	ENSMUSG00000006276.11	ENSMUST00000163643.3	3129	24	-6	-4	-6	4	multi-exon	FALSE	canonical	3	88	junction_2	82.9540606689901	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTATCTTCTTTTT	NA	False	NA	NA	False	TATAAA	-43	NA	73175310	73094838	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_73095369_73099809_73100016_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166245	chr8	-	3042	24	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-2	4	combination_of_known_junctions	FALSE	canonical	3	40	junction_8	97.7241014284603	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTATCTTCTTTTT	NA	False	NA	NA	False	TATAAA	-43	NA	73175306	73094838	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_73095369_73099809_73100016_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132927_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166251	chr8	-	2933	23	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-6	4	combination_of_known_splicesites	FALSE	canonical	3	42	junction_1	80.7011756547953	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTATCTTCTTTTT	NA	False	NA	NA	False	TATAAA	-43	NA	73175310	73094838	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_73095369_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166282	chr8	+	2426	8	FSM	ENSMUSG00000052794.14	ENSMUST00000064853.13	2887	8	1	460	1	-100	multi-exon	FALSE	canonical	3	59	junction_1	11.7334338276463	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTCTGCTTGTTTA	NA	False	NA	6	True	AGTAAA	-21	NA	73197724	73214385	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_73197834_73198593_73199315_73203293_73203586_73205202_73205277_73208957_73209412_73211816_73211913_73212446_73212614_73213872
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166305	chr8	-	3762	18	FSM	ENSMUSG00000052488.8	ENSMUST00000079510.6	3713	18	-42	-7	0	7	multi-exon	TRUE	canonical	3	101	junction_13	118.126552277382	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCTAGCTGTGGATGAG	NA	False	NA	-5	True	AATAAA	-17	NA	73229005	73214325	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222364_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166338	chr8	-	3006	3	FSM	ENSMUSG00000045248.7	ENSMUST00000058534.7	2997	3	-3	-6	-3	6	multi-exon	FALSE	canonical	3	122	junction_2	2.5	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGGAATCATTTCTCAT	3614	False	NA	1	True	AATAAA	-21	NA	73302117	73248398	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_73250951_73251366_73251442_73301738
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166377	chr8	+	179	1	Intergenic	novelGene_5062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAAAGGTGGGCTG	NA	False	NA	NA	False	NA	NA	NA	73410544	73410723	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_73410500_73410700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166387	chr8	+	1031	7	FSM	ENSMUSG00000031622.17	ENSMUST00000109950.5	1024	7	-2	-5	-2	5	multi-exon	FALSE	canonical	3	644	junction_5	27.2197844713485	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTGCAGCAGTGTCGA	NA	False	NA	29	True	AATAAA	-26	NA	73449910	73466539	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73466117_73466357
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166388	chr8	+	4122	19	FSM	ENSMUSG00000031622.17	ENSMUST00000004494.16	4115	19	-5	-2	-2	2	multi-exon	TRUE	canonical	3	31	junction_6	282.896831519815	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCAGGGTCCTTCGTCAT	NA	False	NA	28	True	ATTAAA	-19	NA	73449910	73484831	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73466117_73468101_73468192_73468437_73468557_73471085_73471294_73471521_73471639_73473037_73473277_73474312_73474497_73476346_73476897_73477063_73477234_73479794_73479969_73480172_73480266_73483100_73483196_73483475_73483681_73483802
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166408	chr8	+	181	1	Intergenic	novelGene_5063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTATGTGGTTTTCGTGGC	NA	False	NA	NA	False	NA	NA	NA	75701072	75701253	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_75701100_75701300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166416	chr8	+	4003	12	FSM	ENSMUSG00000034518.15	ENSMUST00000145919.2	3989	12	-14	0	-14	0	multi-exon	FALSE	canonical	3	57	junction_2	21.8858798209528	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTCTTAGCTGTCTTT	NA	False	NA	32	True	ATTAAA	-23	NA	75720292	75758606	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_75720378_75725462_75725567_75726187_75726337_75726440_75726520_75726626_75726742_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166422	chr8	+	3887	11	NIC	ENSMUSG00000034518.15	novel	3989	12	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	24.8185414559357	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTCTTAGCTGTCTTT	NA	False	NA	32	True	ATTAAA	-23	NA	75720304	75758606	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_75720378_75726187_75726337_75726440_75726520_75726626_75726742_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166423	chr8	+	3876	11	FSM	ENSMUSG00000034518.15	ENSMUST00000041759.14	4191	11	321	-6	-2	0	multi-exon	FALSE	canonical	3	15	junction_4	33.0128762757806	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTCTTAGCTGTCTTT	NA	False	NA	32	True	ATTAAA	-23	NA	75720304	75758606	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_75720378_75725462_75725567_75726187_75726337_75726440_75726520_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166433	chr8	-	183	1	Intergenic	novelGene_5064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATTTTTGCTCTACA	NA	False	NA	NA	False	NA	NA	NA	75741598	75741415	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_75741400_75741600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166439	chr8	+	187	1	Intergenic	novelGene_5065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAAAGTATAAATTAAAT	NA	False	NA	NA	False	NA	NA	NA	75747647	75747834	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_75747600_75747800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166497	chr8	+	2712	16	FSM	ENSMUSG00000005410.7	ENSMUST00000212811.2	2653	16	-37	-22	11	17	multi-exon	FALSE	canonical	3	1402	junction_7	114.72564374774	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGGTTGACTCTTTCAGC	NA	False	NA	49	True	NA	NA	NA	75836214	75854338	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166512	chr8	+	187	1	Intergenic	novelGene_5066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTACATATGTTCAGATTC	NA	False	NA	NA	False	NA	NA	NA	75850042	75850229	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_75850000_75850200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166515	chr8	-	3061	23	FSM	ENSMUSG00000037148.9	ENSMUST00000076316.6	3084	23	23	0	23	0	multi-exon	FALSE	canonical	3	15	junction_7	5.93072961101822	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTGTCCGGCCTAAT	NA	False	NA	NA	False	AATAAA	-14	NA	78244559	77976994	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_77977637_77983954_77984047_77985685_77985839_78003776_78003937_78037359_78037511_78071268_78071429_78072900_78073007_78078242_78078302_78085175_78085264_78091714_78091790_78109353_78109420_78111379_78111426_78115282_78115365_78136176_78136272_78137650_78137758_78140126_78140257_78146700_78146806_78147265_78147377_78152958_78153061_78159368_78159441_78177321_78177384_78177456_78177553_78244258
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166521	chr8	+	2785	12	FSM	ENSMUSG00000037134.18	ENSMUST00000056237.15	2781	12	0	-4	0	4	multi-exon	FALSE	canonical	3	124	junction_5	20.627751506924	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATGTAACATTATTTTT	NA	False	NA	17	True	AATAAA	-22	NA	78276025	78307971	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_78276366_78282293_78282443_78285507_78285745_78287435_78287604_78289042_78289146_78290604_78290712_78291582_78291776_78294803_78294988_78298637_78299356_78303966_78304121_78307254_78307378_78307662
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166548	chr8	+	173	1	Intergenic	novelGene_5067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTATCTTTAAAAAACGAAAA	NA	False	NA	NA	False	NA	NA	NA	79136234	79136407	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_79136200_79136400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166553	chr8	+	191	1	Intergenic	novelGene_5068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACTGAACCTCTCAGAAA	NA	False	NA	NA	False	NA	NA	NA	79142939	79143130	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_79142900_79143100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166558	chr8	+	179	1	Intergenic	novelGene_5069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATATCTTATCTATAT	NA	False	NA	NA	False	NA	NA	NA	79217816	79217995	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_79217800_79218000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166565	chr8	-	1676	2	FSM	ENSMUSG00000037070.11	ENSMUST00000211719.2	1622	2	-46	-8	-27	0	multi-exon	FALSE	canonical	3	608	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTCTTGATTTCTCC	NA	False	NA	NA	False	AGTAAA	-18	NA	79235554	79231897	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_79233447_79235427
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166572	chr8	-	1696	2	FSM	ENSMUSG00000037070.11	ENSMUST00000049245.10	1695	2	-1	0	-1	0	multi-exon	FALSE	canonical	3	249	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTCTTGATTTCTCC	NA	False	NA	NA	False	AGTAAA	-18	NA	79235528	79231897	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_79233493_79235427
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166603	chr8	-	1982	4	FSM	ENSMUSG00000031683.17	ENSMUST00000051867.7	2107	4	15	110	15	-110	multi-exon	FALSE	canonical	3	383	junction_3	374.138417641861	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCTCGTGGTCTGTGAA	NA	False	NA	0	True	NA	NA	NA	79547754	79533189	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79547676
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166607	chr8	-	2078	5	FSM	ENSMUSG00000031683.17	ENSMUST00000130325.8	3792	5	18	1696	18	-110	multi-exon	FALSE	canonical	3	636	junction_4	242.43865203387	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCTCGTGGTCTGTGAA	NA	False	NA	0	True	NA	NA	NA	79547751	79533189	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79546615_79546715_79547676
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166624	chr8	-	3009	7	FSM	ENSMUSG00000031681.17	ENSMUST00000066091.14	3099	7	90	0	90	0	multi-exon	FALSE	canonical	3	102	junction_2	13.1835335003767	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCATTTTTTTTCTTTG	NA	False	NA	15	True	AATAAA	-33	NA	80126057	80065023	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_80066422_80070282_80070540_80076219_80076442_80079958_80080076_80082840_80083099_80098412_80098994_80125881
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166632	chr8	+	248	1	Intergenic	novelGene_5070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	616	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCACAGCAATGCAAACC	NA	False	NA	NA	False	NA	NA	NA	80334430	80334678	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_80334400_80334700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166645	chr8	+	196	1	Intergenic	novelGene_5071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGTGATCATGCCCATTAA	NA	False	NA	NA	False	NA	NA	NA	80363707	80363903	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_80363700_80363900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166667	chr8	-	3776	18	FSM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	39	-22	-31	22	multi-exon	FALSE	canonical	3	1167	junction_10	93.0334984503433	1015	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGGTTTCTTTATAGATT	NA	False	NA	NA	False	ATTAAA	-20	NA	80438330	80410068	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166693	chr8	+	845	5	FSM	ENSMUSG00000036977.9	ENSMUST00000048147.9	2801	5	-14	1970	-14	8	multi-exon	FALSE	canonical	3	102	junction_1	177.95698216142	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAGTCAATCTTTAAAT	NA	False	NA	10	True	AATAAA	-28	NA	80438434	80501979	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_80438474_80439733_80439909_80446286_80446378_80455758_80455880_80501560
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166706	chr8	+	194	1	Intergenic	novelGene_5072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTTGGAATAGCGCTTT	NA	False	NA	NA	False	NA	NA	NA	81169102	81169296	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_81169100_81169300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166725	chr8	-	4057	11	NNC	ENSMUSG00000031714.10	novel	4985	11	NA	NA	21249	7	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_4	171.228765106801	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTACTTTTTTCTTA	NA	False	NA	0	True	AATAAA	-24	NA	81585876	81491059	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81502789_81502880_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81585823
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166733	chr8	-	3982	10	NNC	ENSMUSG00000031714.10	novel	4870	10	NA	NA	21234	7	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_6	37.5443770345651	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTACTTTTTTCTTA	NA	False	NA	0	True	AATAAA	-24	NA	81585891	81491059	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81585823
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166743	chr8	-	4900	10	FSM	ENSMUSG00000031714.10	ENSMUST00000034150.10	4870	10	-25	-5	-2	3	multi-exon	FALSE	canonical	3	25	junction_9	135.607913385759	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTGTGTTACTTTTTT	NA	False	NA	-4	True	AATAAA	-20	NA	81607150	81491063	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81606160
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166756	chr8	+	190	1	Intergenic	novelGene_5073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACACATACAAATTAATTAC	NA	False	NA	NA	False	NA	NA	NA	81536684	81536874	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_81536700_81536900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166760	chr8	-	4699	10	FSM	ENSMUSG00000038250.10	ENSMUST00000042724.8	4707	10	15	-7	0	7	multi-exon	FALSE	canonical	3	94	junction_4	8.95392871906924	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTCCTGTTTTGGTTTTC	NA	False	NA	-2	True	ATTAAA	-21	NA	81741542	81707354	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_81708610_81711066_81712430_81714115_81714223_81716635_81716730_81719824_81720019_81722310_81722470_81727681_81727784_81731960_81732091_81738795_81738932_81740383
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166770	chr8	+	179	1	Intergenic	novelGene_5074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGATAGCAAAATGAA	NA	False	NA	NA	False	NA	NA	NA	81724189	81724368	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_81724200_81724400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166778	chr8	-	1697	10	FSM	ENSMUSG00000031711.8	ENSMUST00000034147.4	1675	10	-18	-4	-18	4	multi-exon	FALSE	canonical	3	422	junction_3	43.069567612422	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGTACTGAGTTCTTG	NA	False	NA	-13	True	AATAAA	-21	NA	83500807	83490245	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83497501_83497967_83497988_83499508_83499641_83500685
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166812	chr8	+	573	3	FSM	ENSMUSG00000033938.6	ENSMUST00000036996.6	623	3	50	0	-37	0	multi-exon	FALSE	canonical	3	2087	junction_2	87.5	309	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATCTGTGCTACTTCAA	NA	False	NA	23	True	AATAAA	-23	NA	84293349	84298255	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_84293560_84297458_84297628_84298061
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166850	chr8	+	2246	3	FSM	ENSMUSG00000005483.11	ENSMUST00000005620.10	2996	3	0	750	0	-750	multi-exon	FALSE	canonical	3	562	junction_2	45.5	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAGCAGTCCTTCGACTC	NA	False	NA	10	True	ATTAAA	-19	NA	84334821	84338532	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_84335172_84336442_84337024_84337217
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166856	chr8	+	1765	7	FSM	ENSMUSG00000019433.10	ENSMUST00000019577.10	1522	7	-145	-98	-145	98	multi-exon	FALSE	canonical	3	964	junction_1	101.245027312731	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTCTCCCTGCTTTCTT	NA	False	NA	24	True	NA	NA	NA	84379160	84391421	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_84379367_84387587_84387910_84388583_84388770_84388863_84389045_84389677_84389791_84390548_84390631_84390746
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166868	chr8	+	1703	6	NIC	ENSMUSG00000019433.10	novel	1522	7	NA	NA	0	96	intron_retention	FALSE	canonical	3	964	junction_1	105.526489565417	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGCTCTCCCTGCTTTC	NA	False	NA	22	True	NA	NA	NA	84379314	84391419	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_84379367_84387587_84387910_84388583_84389045_84389677_84389791_84390548_84390631_84390746
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166886	chr8	+	1643	11	FSM	ENSMUSG00000005481.19	ENSMUST00000019576.15	1656	11	19	-6	19	6	multi-exon	FALSE	canonical	3	2216	junction_5	95.6715736256073	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGCCATCTTTTTTATCAA	NA	False	NA	105	True	NA	NA	NA	84441824	84449983	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166899	chr8	+	1871	10	NIC	ENSMUSG00000005481.19	novel	1927	11	NA	NA	0	2	intron_retention	FALSE	canonical	3	2216	junction_5	100.447885880081	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGGCTCCAGCCCCATC	NA	False	NA	28	True	AATAAA	-14	NA	84441896	84449906	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166902	chr8	+	1553	12	FSM	ENSMUSG00000005481.19	ENSMUST00000140521.8	1551	12	0	-2	0	2	multi-exon	FALSE	canonical	3	43	junction_5	911.296107223839	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGGCTCCAGCCCCATC	NA	False	NA	28	True	AATAAA	-14	NA	84441896	84449906	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448094_84448154_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166911	chr8	+	1749	11	FSM	ENSMUSG00000005481.19	ENSMUST00000109810.2	1794	11	-26	71	-26	2	multi-exon	FALSE	canonical	3	134	junction_1	682.0140834323	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGGCTCCAGCCCCATC	NA	False	NA	28	True	AATAAA	-14	NA	84442150	84449906	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_84442476_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166927	chr8	-	2973	19	FSM	ENSMUSG00000002885.15	ENSMUST00000109802.3	2867	19	-104	-2	49	0	multi-exon	FALSE	canonical	3	115	junction_15	26.9886235749276	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCACGTTTGCTGGTGAGA	NA	False	NA	-9	True	ATTAAA	-21	NA	84467906	84449990	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84460982_84467735
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166941	chr8	+	179	1	Intergenic	novelGene_5075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAATAAAATTTAAATGGG	NA	False	NA	NA	False	NA	NA	NA	84578359	84578538	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_84578400_84578500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166965	chr8	+	2320	10	FSM	ENSMUSG00000005469.11	ENSMUST00000005606.8	2276	10	-43	-1	-43	1	multi-exon	FALSE	canonical	3	651	junction_8	27.9342260972865	314	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCGCTGGTTTTCCCGAC	409	False	NA	NA	False	AATAAA	-20	NA	84699578	84723073	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_84699862_84707402_84707465_84707800_84707930_84713465_84713565_84714911_84714995_84717056_84717184_84717270_84717367_84717491_84717615_84721423_84721589_84721920
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166972	chr8	+	2165	5	FSM	ENSMUSG00000079003.4	ENSMUST00000095228.5	2265	5	106	-6	106	6	multi-exon	FALSE	canonical	3	513	junction_1	22.3941956765587	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTTTCTGTATGGAGG	1174	False	NA	29	True	AATAAA	-16	NA	84724235	84727044	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_84725195_84725571_84725870_84725952_84726050_84726144_84726257_84726345
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166986	chr8	-	1328	3	FSM	ENSMUSG00000074217.9	ENSMUST00000190457.2	1351	3	17	6	15	-6	multi-exon	FALSE	canonical	3	145	junction_2	17	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGCTTCAGTGCAAGCT	7550	False	NA	-15	True	AATAAA	-16	NA	84738770	84736856	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_84737122_84737339_84737402_84737769
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000166994	chr8	+	2466	7	FSM	ENSMUSG00000047986.13	ENSMUST00000055077.7	2452	7	-6	-8	-6	8	multi-exon	FALSE	canonical	3	12	junction_2	39.9110121255887	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTAATTTATT	NA	False	NA	19	True	ATTAAA	-32	NA	84748093	84756932	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_84748158_84750980_84751030_84752822_84752904_84753377_84753521_84753628_84753714_84754754_84754801_84754934
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167001	chr8	+	2472	5	ISM	ENSMUSG00000047986.13	ENSMUST00000055077.7	2452	7	4604	-8	0	8	3prime_fragment	FALSE	canonical	3	94	junction_2	4.49305018890286	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTAATTTATT	NA	False	NA	19	True	ATTAAA	-32	NA	84752703	84756932	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr8_+_84752904_84753377_84753521_84753628_84753714_84754754_84754801_84754934
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167024	chr8	-	2226	13	FSM	ENSMUSG00000037103.9	ENSMUST00000210279.2	2199	13	-25	-2	-20	2	multi-exon	FALSE	canonical	3	169	junction_7	21.0218140669797	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTGTCCTGTTCTGTCC	9237	False	NA	-1	True	ACTAAA	-19	NA	84831417	84823698	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_84824138_84824365_84824482_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84825300_84825386_84825822_84828304_84828476_84828560_84828701_84828792_84828900_84829374_84829511_84829584_84829683_84831245
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167036	chr8	-	178	1	Intergenic	novelGene_5076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATGTAATATGCCT	9301	False	NA	NA	False	NA	NA	NA	84846373	84846195	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_84846200_84846400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167062	chr8	-	609	4	NNC	ENSMUSG00000019362.9	novel	616	3	NA	NA	-8	5	at_least_one_novel_splicesite	TRUE	canonical	3	981	junction_1	392.595069873386	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTGTTTGGTGCTTT	9826	False	NA	-2	True	AATAAA	-17	NA	84976356	84972861	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_-_84972948_84972967_84973323_84976102_84976159_84976244
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167068	chr8	-	629	3	FSM	ENSMUSG00000019362.9	ENSMUST00000019506.9	616	3	-8	-5	-8	5	multi-exon	FALSE	canonical	3	1764	junction_2	46	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTGTTTGGTGCTTT	9826	False	NA	-2	True	AATAAA	-17	NA	84976356	84972861	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_84973323_84976102_84976159_84976244
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167083	chr8	-	1219	5	FSM	ENSMUSG00000004996.10	ENSMUST00000126435.8	2819	5	26	1574	26	-458	multi-exon	FALSE	canonical	3	192	junction_2	18.1159460144923	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATCTTCACCCACACTC	6992	False	NA	0	True	AATAAA	-22	NA	84983927	84978108	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_84978341_84980491_84980717_84980804_84980982_84982872_84983049_84983518
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167092	chr8	-	1641	10	FSM	ENSMUSG00000004994.13	ENSMUST00000098578.10	2119	10	-22	500	-22	6	multi-exon	FALSE	canonical	3	143	junction_9	31.8437543540021	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTCTAAACTCATCTA	NA	False	NA	-16	True	ATTAAA	-21	NA	84997031	84984923	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_84985556_84985741_84985881_84986922_84987096_84987171_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167111	chr8	+	161	1	Intergenic	novelGene_5077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGCTGATGGCTCAATG	NA	False	NA	NA	False	NA	NA	NA	85376006	85376167	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_85376000_85376200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167115	chr8	-	1525	1	FSM	ENSMUSG00000053560.6	ENSMUST00000060427.6	1524	1	1	-2	1	2	mono-exon	FALSE	NA	NA	NA	NA	NA	1058	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTCTGGCTTGCTTCC	NA	False	NA	1	True	AATAAA	-22	NA	85389482	85387957	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_85388000_85389500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167125	chr8	-	4808	6	FSM	ENSMUSG00000001910.6	ENSMUST00000001975.6	4344	6	-14	-450	-14	450	multi-exon	FALSE	canonical	3	507	junction_4	52.9172939595365	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTAGTTTGATTTGTGGTT	NA	False	NA	1	True	AATAAA	-22	NA	85414545	85396657	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85414303
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167131	chr8	-	4219	6	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	6	3	combination_of_known_junctions	FALSE	canonical	3	136	junction_5	189.167227605629	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGCTCTGCTCACTG	NA	False	NA	-3	True	AATAAA	-22	NA	85413776	85397104	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85413676
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167146	chr8	-	4239	6	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	26	2	combination_of_known_junctions	FALSE	canonical	3	138	junction_4	190.539864595312	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGTGCTCTGCTCACT	NA	False	NA	-4	True	AATAAA	-21	NA	85414505	85397105	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85403050_85403882_85414303
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167178	chr8	+	2034	17	FSM	ENSMUSG00000001909.17	ENSMUST00000109768.9	2044	17	11	-1	3	0	multi-exon	FALSE	canonical	3	38	junction_1	132.785409001705	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85415903	85426416	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_85415979_85416336_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167182	chr8	+	2110	17	FSM	ENSMUSG00000001909.17	ENSMUST00000109767.9	2138	17	28	0	3	0	multi-exon	FALSE	canonical	3	116	junction_1	116.091541869983	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85415903	85426416	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_85415979_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167186	chr8	+	2375	16	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	3	0	intron_retention	FALSE	canonical	3	179	junction_1	102.688395968905	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85415903	85426416	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_85416006_85416260_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167190	chr8	+	2061	17	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	113.375964714749	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85415903	85426416	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_85416006_85416336_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167191	chr8	+	2137	17	FSM	ENSMUSG00000001909.17	ENSMUST00000001974.11	2567	17	409	21	3	0	multi-exon	FALSE	canonical	3	179	junction_1	103.16006979447	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85415903	85426416	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_85416006_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167229	chr8	-	214	1	Intergenic	novelGene_5078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTTTTTTTTTTAAAG	3212	False	NA	NA	False	NA	NA	NA	85556225	85556011	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_85556000_85556200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167240	chr8	+	1748	2	FSM	ENSMUSG00000033751.6	ENSMUST00000036734.6	2494	2	741	5	741	-5	multi-exon	FALSE	canonical	3	736	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATATATATATATACT	3415	False	NA	NA	False	NA	NA	NA	85558891	85562106	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_85559270_85560736
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167294	chr8	+	1835	13	FSM	ENSMUSG00000003808.19	ENSMUST00000003906.13	1826	13	-8	-1	-8	1	multi-exon	FALSE	canonical	3	551	junction_9	56.0676055212713	468	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTGTCATTCATTTCAT	NA	False	NA	39	True	AATAAA	-39	NA	85583609	85595887	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594548_85594637_85594716_85594852_85594968_85595494
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167306	chr8	-	177	1	Intergenic	novelGene_5079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGGTGGTGGTGGCACAC	NA	False	NA	NA	False	NA	NA	NA	85585935	85585758	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_85585800_85585900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167314	chr8	+	778	5	FSM	ENSMUSG00000003824.13	ENSMUST00000136026.8	1686	5	83	825	1	-50	multi-exon	FALSE	canonical	3	1047	junction_2	374.154045815357	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATACTTTATTCC	NA	False	NA	31	True	ATTAAA	-14	NA	85598822	85614025	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_85598883_85599348_85599462_85610059_85610214_85612563_85612753_85613763
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167331	chr8	+	1217	4	NIC	ENSMUSG00000003824.13	novel	929	5	NA	NA	28	-50	intron_retention	FALSE	canonical	3	1047	junction_1	431.92772029074	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATACTTTATTCC	NA	False	NA	31	True	ATTAAA	-14	NA	85598849	85614025	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_85599462_85610059_85610214_85612563_85612753_85613763
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167345	chr8	-	1919	12	FSM	ENSMUSG00000003809.15	ENSMUST00000109745.8	2114	12	7	188	3	-188	multi-exon	FALSE	canonical	3	204	junction_11	27.3803935401452	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGGACTAGGTCTACTG	NA	False	NA	-7	True	AATAAA	-21	NA	85620543	85613209	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183_85620314_85620370
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167362	chr8	+	190	1	Intergenic	novelGene_5080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	354	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACACTGACTGCTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	85616779	85616969	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_85616800_85617000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167366	chr8	+	187	1	Intergenic	novelGene_5081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTGCATGCTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	85634624	85634811	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_85634600_85634800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167379	chr8	+	1136	3	FSM	ENSMUSG00000003812.14	ENSMUST00000148573.2	1118	3	-15	-3	-15	3	multi-exon	FALSE	canonical	3	99	junction_1	1.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATAGAGTGGGGGTGTTT	NA	False	NA	7	True	AATAAA	-19	NA	85640004	85649547	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_85640158_85647022_85647134_85648675
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167407	chr8	+	1462	6	FSM	ENSMUSG00000005161.16	ENSMUST00000005292.15	1500	6	19	19	19	-19	multi-exon	FALSE	canonical	3	3496	junction_3	236.69169820676	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGAGTTCAAGTTTGCG	NA	False	NA	NA	False	AATAAA	-18	NA	85696258	85701444	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_85696392_85696868_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167410	chr8	+	1037	6	FSM	ENSMUSG00000005161.16	ENSMUST00000109734.8	1612	6	58	517	34	6	multi-exon	FALSE	canonical	3	308	junction_1	1434.62463383284	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTTGGTGTGTGTTT	NA	False	NA	19	True	AATAAA	-19	NA	85696273	85700946	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_85696392_85696780_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167419	chr8	-	1809	1	FSM	ENSMUSG00000052837.8	ENSMUST00000064922.7	1809	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTGGTCTCTTTTTTC	NA	False	NA	-1	True	AGTAAA	-21	NA	85705347	85703538	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_85703500_85705300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167451	chr8	+	206	2	Intergenic	novelGene_5082	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAGAGGATGGCTAGGG	NA	False	NA	NA	False	NA	NA	NA	85727102	85727469	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_85727279_85727439
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167457	chr8	+	187	1	Intergenic	novelGene_5083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATCCCAATCTGGAGTT	279	False	NA	NA	False	NA	NA	NA	85731098	85731285	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_85731100_85731300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167464	chr8	-	1266	7	FSM	ENSMUSG00000052456.10	ENSMUST00000064314.10	1256	7	-8	-2	-8	2	multi-exon	FALSE	canonical	1	664	junction_3	477.58303524681	648	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTCAGTGGATGGG	8392	False	NA	-2	True	AATAAA	-16	NA	85751918	85744557	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_85744885_85745150_85745349_85745439_85745548_85746150_85746302_85746388_85746538_85750806_85750955_85751733
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167480	chr8	+	901	3	FSM	ENSMUSG00000041203.10	ENSMUST00000047281.10	902	3	1	0	1	0	multi-exon	FALSE	canonical	3	920	junction_1	163	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGCTTGGTTTATCTT	NA	False	NA	21	True	AGTAAA	-21	NA	85753452	85756915	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_85753864_85756167_85756246_85756503
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167508	chr8	+	4794	25	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	-1	0	combination_of_known_splicesites	TRUE	canonical	3	140	junction_1	62.568282144834	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763542	85784212	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_85763607_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167516	chr8	+	4820	25	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	102	junction_20	83.055035301232	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763546	85784212	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_85763607_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167530	chr8	+	4839	25	FSM	ENSMUSG00000031691.15	ENSMUST00000211601.2	2941	25	15	-1913	15	0	multi-exon	FALSE	canonical	3	53	junction_1	77.0544540496452	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763811	85784212	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_85763921_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167537	chr8	+	4878	25	NIC	ENSMUSG00000031691.15	novel	4884	25	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	3	64	junction_1	75.1550134167154	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763815	85784212	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_85763921_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167563	chr8	+	1925	9	FSM	ENSMUSG00000008167.15	ENSMUST00000139721.8	1993	9	65	3	24	0	multi-exon	TRUE	canonical	3	68	junction_1	8.18535277187245	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTGTGAGCTTTCTGT	NA	False	NA	22	True	AATAAA	-22	NA	85786749	85793750	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_85787166_85788574_85788715_85788800_85788930_85791012_85791302_85792449_85792599_85792684_85792799_85792901_85792992_85793073_85793140_85793218
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167564	chr8	+	1841	10	FSM	ENSMUSG00000008167.15	ENSMUST00000095220.4	1907	10	66	0	24	0	multi-exon	FALSE	canonical	3	54	junction_4	11.5864970366477	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTGTGAGCTTTCTGT	NA	False	NA	22	True	AATAAA	-22	NA	85786749	85793750	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_85787166_85788574_85788715_85788800_85788930_85791012_85791126_85791209_85791302_85792449_85792599_85792684_85792799_85792901_85792992_85793073_85793140_85793218
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167571	chr8	+	1366	9	FSM	ENSMUSG00000060038.15	ENSMUST00000078665.13	1333	9	-26	-7	-26	7	multi-exon	FALSE	canonical	3	191	junction_2	36.5391485259304	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGGTGTCAGGTCCGTA	NA	False	NA	30	True	AATAAA	-36	NA	85798359	85801798	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_85798683_85799080_85799246_85799923_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801021_85801126_85801362_85801489_85801562
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167579	chr8	-	1200	9	FSM	ENSMUSG00000005150.17	ENSMUST00000093357.12	1238	9	38	0	-5	0	multi-exon	FALSE	canonical	3	89	junction_6	13.3410784796432	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTAGTCTTCATTCTT	NA	False	NA	-2	True	AATAAA	-35	NA	85807337	85801663	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_85801973_85802451_85802567_85802652_85802762_85802845_85802914_85806209_85806337_85806417_85806467_85806748_85806855_85806941_85807063_85807141
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167594	chr8	+	698	4	FSM	ENSMUSG00000059355.14	ENSMUST00000079764.14	922	4	222	2	-11	-2	multi-exon	FALSE	canonical	3	586	junction_1	13.7679176187089	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTTGCTTCTCTTTTGT	NA	False	NA	34	True	TATAAA	-23	NA	85807590	85808966	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_85807693_85807801_85807908_85808405_85808504_85808574
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167607	chr8	+	3174	24	FSM	ENSMUSG00000005142.11	ENSMUST00000034121.11	3822	24	-42	690	3	-690	multi-exon	FALSE	canonical	3	158	junction_7	31.1019422681999	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCAGTGCACTATCTTT	NA	False	NA	20	True	ATTAAA	-22	NA	85809901	85824221	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_85810118_85811029_85811133_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167621	chr8	+	211	1	Intergenic	novelGene_5084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGGCAGAGAGAGGGAGA	NA	False	NA	NA	False	NA	NA	NA	85839210	85839421	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_85839200_85839400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167628	chr8	+	192	1	Intergenic	novelGene_5085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGTGGCCTTGTTGGA	NA	False	NA	NA	False	NA	NA	NA	85978051	85978243	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_85978100_85978200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167636	chr8	-	3463	17	FSM	ENSMUSG00000031696.10	ENSMUST00000034131.10	3474	17	18	-7	18	7	multi-exon	FALSE	canonical	3	1260	junction_3	108.704875695619	441	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTTTGTTTTTTGTACA	NA	False	NA	-1	True	AATAAA	-22	NA	86026413	85987013	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86026083
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167657	chr8	+	1013	6	NIC	ENSMUSG00000031697.13	novel	1287	7	NA	NA	-15	7	combination_of_known_splicesites	FALSE	canonical	3	109	junction_2	378.03089820807	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATGAGTATTTTGCCT	NA	False	NA	16	True	AATAAA	-24	NA	86026536	86034707	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_86026622_86027737_86027868_86029990_86030081_86031837_86031951_86032845_86032948_86034214
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167688	chr8	-	178	1	Intergenic	novelGene_5086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAATGTGCTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	86050374	86050196	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_86050200_86050400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167690	chr8	+	189	1	Intergenic	novelGene_5087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGGCCTGACACAAAACCA	NA	False	NA	NA	False	NA	NA	NA	86111757	86111946	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_86111800_86111900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167698	chr8	-	1475	4	FSM	ENSMUSG00000036934.10	ENSMUST00000047749.7	1587	4	19	93	0	-93	multi-exon	FALSE	canonical	3	253	junction_1	19.3045763140937	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTAGTGTGGTGTAGCT	NA	False	NA	1	True	AATAAA	-24	NA	86159443	86135480	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_86136520_86138741_86138925_86153488_86153586_86159287
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167706	chr8	+	191	1	Intergenic	novelGene_5088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATCTAGAAGTCAACTGT	NA	False	NA	NA	False	NA	NA	NA	86179601	86179792	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_86179600_86179800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167716	chr8	+	186	1	Intergenic	novelGene_5089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAATGTACTGAAATTTG	NA	False	NA	7	True	TTTAAA	-1	NA	86198381	86198567	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_86198400_86198600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167753	chr8	-	3341	18	FSM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	-27	-8	-27	8	multi-exon	FALSE	canonical	1	110	junction_3	53.6212528231601	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTGTGGCAAGCAACTGGA	NA	False	NA	-13	True	AATAAA	-21	NA	86567577	86444198	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_86445557_86449259_86449378_86452142_86452226_86452794_86452920_86459001_86459081_86462753_86462798_86464745_86464855_86466856_86467008_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565556_86565630_86567162
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167763	chr8	+	4634	32	FSM	ENSMUSG00000036879.16	ENSMUST00000053771.14	5351	32	-14	731	-3	4	multi-exon	FALSE	canonical	3	66	junction_1	17.4946996581545	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTCTGCTTTCCAATT	NA	False	NA	12	True	NA	NA	NA	86567616	86787274	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_86567733_86569632_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167773	chr8	+	4586	32	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	21.9062423691205	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAATGTCTGCTTTCCA	NA	False	NA	9	True	NA	NA	NA	86567644	86787271	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_86567733_86569649_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167779	chr8	+	4580	32	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	23.8918391755081	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAATGTCTGCTTTCCA	NA	False	NA	9	True	NA	NA	NA	86567645	86787271	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_+_86567733_86569654_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167782	chr8	-	4181	2	Antisense	novelGene_ENSMUSG00000036879.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGGCTCAGGATGACTGG	4414	False	NA	NA	False	NA	NA	NA	86760254	86756034	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr8_-_86757808_86757846
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167785	chr8	+	158	1	Intergenic	novelGene_5090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATATATGTGAAAG	NA	False	NA	NA	False	NA	NA	NA	87271744	87271902	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_87271700_87271900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167792	chr8	+	2859	15	FSM	ENSMUSG00000047866.21	ENSMUST00000034141.18	2859	15	5	-5	5	4	multi-exon	TRUE	canonical	3	174	junction_5	34.038693468775	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTCTCCAGTGGGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	87350676	87443264	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_87351045_87358013_87358249_87360496_87360629_87361424_87361548_87363106_87363271_87364530_87364626_87368169_87368429_87378803_87378946_87392318_87392470_87394340_87394468_87399563_87399698_87435560_87435704_87439939_87440148_87440530_87440722_87442877
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167802	chr8	-	2151	2	FSM	ENSMUSG00000036840.6	ENSMUST00000045296.6	1968	2	-109	-74	-109	74	multi-exon	FALSE	canonical	3	375	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTTTACTTTAGC	NA	False	NA	NA	False	ATTAAA	-25	NA	87472671	87450560	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_87452485_87472444
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167809	chr8	+	175	1	Intergenic	novelGene_5091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	87500980	87501155	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_87501000_87501200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167815	chr8	-	6511	7	FSM	ENSMUSG00000031652.12	ENSMUST00000034074.8	6469	7	-39	-3	-39	3	multi-exon	FALSE	canonical	3	315	junction_2	32.4790530786981	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGGTGGTGCTTTCT	NA	False	NA	-5	True	NA	NA	NA	87611925	87567763	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579786_87579918_87587053_87588739_87611449
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167831	chr8	+	181	1	Intergenic	novelGene_5092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTCTCTGAGACAGG	NA	False	NA	NA	False	NA	NA	NA	87646104	87646285	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_87646100_87646300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167836	chr8	+	539	1	FSM	ENSMUSG00000066362.6	ENSMUST00000183478.2	538	1	5	-6	5	6	mono-exon	FALSE	NA	NA	NA	NA	NA	1367	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAGACACTAAAGAGGAGC	NA	False	NA	43	True	AATAAA	-32	NA	87774321	87774860	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_87774300_87774900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167843	chr8	+	520	4	FSM	ENSMUSG00000097248.10	ENSMUST00000182174.8	498	4	-21	-1	-21	0	multi-exon	FALSE	canonical	3	132	junction_1	31.0590834807897	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGTGTCCATTCCTCCT	177	False	NA	7	True	AATAAA	-15	NA	88199418	88252182	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_88199589_88248363_88248442_88250923_88251056_88252042
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167851	chr8	+	200	1	Intergenic	novelGene_5093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGAGGGAGCAGCATCCC	NA	False	NA	NA	False	NA	NA	NA	88397294	88397494	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_88397300_88397500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167859	chr8	+	190	1	Intergenic	novelGene_5094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATTCAGAGCATGAAAAG	4326	False	NA	NA	False	NA	NA	NA	88810850	88811040	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_88810800_88811000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167870	chr8	+	1736	6	FSM	ENSMUSG00000036810.17	ENSMUST00000095214.10	1731	6	0	-5	0	1	multi-exon	FALSE	canonical	3	147	junction_2	26.3256528883901	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGTTAGAGATTTTCTT	NA	False	NA	14	True	AATAAA	-16	NA	88845396	88861739	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_88845498_88846407_88846480_88851709_88851784_88856322_88856433_88856974_88857030_88860415
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167878	chr8	+	3256	15	FSM	ENSMUSG00000031657.17	ENSMUST00000034079.14	3251	15	-5	0	-5	0	multi-exon	FALSE	canonical	3	239	junction_7	19.6926641267291	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTGTCATACAGATT	NA	False	NA	NA	False	AATAAA	-16	NA	88864477	88898655	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_88864786_88864902_88865076_88866519_88866608_88868299_88868410_88871156_88871267_88874174_88874316_88876719_88876998_88883089_88883181_88883297_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88891515_88891660_88893623_88893801_88897486
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167890	chr8	+	4539	13	NNC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	35.4717219141608	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAGTTTGCCTGCTCAT	NA	False	NA	13	True	AGTAAA	-14	NA	88925826	88986349	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_+_88925942_88926656_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167907	chr8	+	185	1	Intergenic	novelGene_5095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAAGCCGGGCGTGGTGG	9861	False	NA	NA	False	NA	NA	NA	88961615	88961800	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_88961600_88961800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167930	chr8	+	4536	17	FSM	ENSMUSG00000036712.16	ENSMUST00000209559.2	4476	17	-27	-33	1	33	multi-exon	TRUE	canonical	3	35	junction_1	10.7172466146861	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTACTCCTTGGTTTTAT	NA	False	NA	41	True	TATAAA	-23	NA	89423675	89475116	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_89423728_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167943	chr8	-	5569	3	ISM	ENSMUSG00000031665.8	ENSMUST00000034090.8	5265	4	1274	7	1274	-7	3prime_fragment	FALSE	canonical	3	240	junction_1	16.5	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACATATTGTGTCTGTGTT	NA	False	NA	NA	False	GATAAA	-2	NA	89769516	89753869	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr8_-_89755447_89756571_89760027_89768979
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167951	chr8	-	2353	5	Intergenic	novelGene_5096	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	63	junction_4	28.6574597618142	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCCATTTTTTATTG	NA	False	NA	NA	False	AATAAA	-15	NA	89779673	89772259	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_89774095_89774349_89774422_89775330_89775532_89776215_89776356_89779568
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167959	chr8	-	2413	5	Intergenic	novelGene_5097	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	69	junction_1	27.8511669414407	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCCATTTTTTATTG	NA	False	NA	NA	False	AATAAA	-15	NA	89779673	89772259	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_89774095_89774349_89774422_89775330_89775532_89776215_89776356_89779508
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167983	chr8	-	193	1	Intergenic	novelGene_5098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	494	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATAATGAATCCCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	91554545	91554352	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_91554400_91554500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000167994	chr8	+	193	1	Intergenic	novelGene_5099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAGCAGAACATGGGAAT	NA	False	NA	NA	False	NA	NA	NA	91739779	91739972	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_91739800_91740000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168013	chr8	-	2067	10	FSM	ENSMUSG00000031667.17	ENSMUST00000109609.9	1171	10	6	-902	6	2	multi-exon	TRUE	canonical	3	139	junction_9	96.0081015100057	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTGTTAAATAATTTTCT	NA	False	NA	-71	True	AATAAA	-20	NA	91860645	91850194	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857777_91860527
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168037	chr8	+	195	1	Antisense	novelGene_ENSMUSG00000031667.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACCAGGTTTCAAAGACC	NA	False	NA	NA	False	NA	NA	NA	91858804	91858999	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr8_+_91858800_91859000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168048	chr8	+	3564	9	FSM	ENSMUSG00000055932.16	ENSMUST00000069718.15	3564	9	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_7	44.2492937796752	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCGTCCGTGCTTTTCTCC	NA	False	NA	16	True	AATAAA	-24	NA	92040152	92395067	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_92040249_92128434_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399_92249525_92392909
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168056	chr8	+	4733	8	FSM	ENSMUSG00000055932.16	ENSMUST00000128081.8	4707	8	-9	-17	-9	17	multi-exon	FALSE	canonical	3	202	junction_7	44.6025532352358	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAGTGGAGGCGGGTG	NA	False	NA	NA	False	AATGAA	-28	NA	92040176	92252875	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_92040249_92128434_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168070	chr8	+	188	1	Intergenic	novelGene_5100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGACAACTTTGGAGCA	NA	False	NA	NA	False	NA	NA	NA	93496143	93496331	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_93496100_93496300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168076	chr8	+	189	1	Intergenic	novelGene_5101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTATGTGGGAGCCAGA	NA	False	NA	NA	False	NA	NA	NA	93516711	93516900	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_93516700_93516900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168088	chr8	-	3719	14	FSM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	160	1	160	-1	multi-exon	TRUE	canonical	3	217	junction_1	15.7862947074897	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTCTTCCATTTCAGAT	NA	False	NA	-6	True	AATAAA	-16	NA	94739310	94698216	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94707050_94709939_94710131_94711461_94711573_94711966_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168096	chr8	+	198	1	Intergenic	novelGene_5102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTACAGCCTTTTGACTCC	NA	False	NA	NA	False	NA	NA	NA	94733221	94733419	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_94733200_94733400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168101	chr8	-	5020	7	FSM	ENSMUSG00000031754.11	ENSMUST00000034204.11	5010	7	-10	0	-10	0	multi-exon	FALSE	canonical	3	2190	junction_4	118.898649651242	209	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTAATTGTTTGGGATAT	NA	False	NA	NA	False	AATAAA	-17	NA	94763669	94742123	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_94746333_94749402_94749518_94751169_94751246_94755462_94755553_94757771_94757836_94758929_94759131_94763404
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168112	chr8	+	5282	13	FSM	ENSMUSG00000033009.16	ENSMUST00000109556.9	5310	13	31	-3	-9	3	multi-exon	FALSE	canonical	3	129	junction_2	14.2971928091574	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGTGGTAATTTATAAAC	NA	False	NA	10	True	AATAAA	-20	NA	94763856	94794552	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_94764071_94765592_94765739_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784424_94784677_94784992_94789594_94789718_94790096_94790156_94790806
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168129	chr8	+	194	1	Intergenic	novelGene_5103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCAGAAGCCAGTGTCC	NA	False	NA	NA	False	NA	NA	NA	94804237	94804431	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_94804200_94804400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168163	chr8	+	355	3	NNC	ENSMUSG00000031765.9	novel	549	3	NA	NA	271	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7341	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTTTTCTTGGTGTGG	NA	False	NA	29	True	AATAAA	-18	NA	94906139	94906955	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_+_94906203_94906450_94906517_94906729
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168173	chr8	+	200	1	Intergenic	novelGene_5104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAAATTCTGGGTTGAAG	466	False	NA	NA	False	NA	NA	NA	94924163	94924363	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_94924200_94924400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168182	chr8	+	2727	22	FSM	ENSMUSG00000032939.15	ENSMUST00000079961.14	2707	22	-17	-3	-17	3	multi-exon	FALSE	canonical	3	950	junction_1	70.7360075664432	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTCCTTTTTTTTTTC	NA	False	NA	29	True	AATAAA	-30	NA	94941174	95041491	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_94941260_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168195	chr8	+	2701	22	NNC	ENSMUSG00000032939.15	novel	2707	22	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	246.553366146716	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTTTTTCCTTTTTTTT	NA	False	NA	26	True	AATAAA	-27	NA	94941202	95041488	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_+_94941265_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168216	chr8	+	1881	8	FSM	ENSMUSG00000031770.17	ENSMUST00000034220.8	1873	8	0	-8	0	2	multi-exon	FALSE	canonical	3	44	junction_2	160.784175279808	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCATTGTCCTGGCAAGC	NA	False	NA	36	True	AATAAA	-29	NA	95113122	95121994	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_95113367_95115983_95116062_95116151_95116224_95117345_95117477_95118359_95118483_95118801_95119153_95120423_95120530_95121218
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168221	chr8	+	1771	7	NIC	ENSMUSG00000031770.17	novel	1952	8	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_6	185.799174738031	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGACTCCCATTGTCCT	NA	False	NA	29	True	AATAAA	-22	NA	95113122	95121987	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_95113367_95115983_95116062_95116148_95116224_95117345_95117477_95118359_95118483_95118801_95119153_95121218
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168240	chr8	+	3853	15	FSM	ENSMUSG00000050079.11	ENSMUST00000060389.10	3852	15	1	-2	1	2	multi-exon	FALSE	canonical	3	105	junction_1	22.9280151245375	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCACAGCTCTCATTGG	8112	False	NA	10	True	AATAAA	-27	NA	95328565	95386905	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_95329059_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168261	chr8	+	3120	3	FSM	ENSMUSG00000031778.14	ENSMUST00000034230.7	3315	3	195	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGAACTTTTCTCTGGG	2374	False	NA	NA	False	AATAAA	-24	NA	95498831	95509055	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_95498963_95504655_95504777_95506187
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168266	chr8	+	195	1	Intergenic	novelGene_5105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGCGCTCCTGGAGGAA	NA	False	NA	NA	False	NA	NA	NA	95517763	95517958	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_95517800_95518000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168274	chr8	-	1617	9	FSM	ENSMUSG00000031781.15	ENSMUST00000162538.9	4359	9	0	2742	0	15	multi-exon	FALSE	canonical	3	1341	junction_8	171.134997881789	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCTTTGTGTCTGTGT	NA	False	NA	1	True	ATTAAA	-34	NA	95564986	95549173	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142_95559329_95564879
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168275	chr8	-	1822	9	FSM	ENSMUSG00000031781.15	ENSMUST00000034233.15	1807	9	0	-15	0	15	multi-exon	FALSE	canonical	3	211	junction_8	506.411394026635	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCTTTGTGTCTGTGT	NA	False	NA	1	True	ATTAAA	-34	NA	95564893	95549173	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142_95559329_95564581
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168287	chr8	-	1504	9	NNC	ENSMUSG00000031781.15	novel	4359	9	NA	NA	-22	7	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_7	543.20023932248	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGAGTGTGTCTTTGT	NA	False	NA	-7	True	ATTAAA	-26	NA	95564915	95549181	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559176_95559329_95564879
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168312	chr8	+	1206	9	FSM	ENSMUSG00000031783.11	ENSMUST00000109521.4	1580	9	48	326	-3	175	multi-exon	FALSE	canonical	3	1933	junction_5	86.4056566435323	257	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTCATCGTGCCACTAAC	NA	False	NA	32	True	AATAAA	-23	NA	95584125	95590544	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_95584270_95584374_95584425_95586871_95586941_95587071_95587125_95588338_95588468_95588809_95588862_95589148_95589318_95589437_95589513_95590079
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168333	chr8	-	180	1	Intergenic	novelGene_5106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGGGGGGGCTTCTTCTA	NA	False	NA	NA	False	NA	NA	NA	95755442	95755262	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_95755300_95755400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168337	chr8	+	2589	20	FSM	ENSMUSG00000031787.9	ENSMUST00000034239.9	3777	20	44	1144	44	-1144	multi-exon	FALSE	canonical	3	123	junction_1	16.4357221924964	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGGAATATCCGCTGGC	853	False	NA	22	True	ATTAAA	-26	NA	95807857	95825695	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_95807933_95809225_95809522_95813915_95814047_95816587_95816706_95820143_95820245_95820541_95820584_95821107_95821192_95821347_95821464_95821800_95821873_95821979_95822131_95822233_95822425_95822516_95822648_95822983_95823035_95823839_95823917_95824026_95824147_95824242_95824393_95824582_95824660_95824733_95824809_95824946_95825064_95825281
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168370	chr8	-	4396	2	FSM	ENSMUSG00000046556.8	ENSMUST00000057717.8	7232	2	-284	3120	-284	-3120	multi-exon	FALSE	canonical	3	26	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTTCCACTCGTTCTT	NA	False	NA	-1	True	AGTAAA	-22	NA	96058862	96052758	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_96056441_96058148
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168378	chr8	+	1752	7	FSM	ENSMUSG00000031792.16	ENSMUST00000034245.16	1758	7	8	-2	8	2	multi-exon	FALSE	canonical	3	182	junction_6	19.6185852927495	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTGTCTTATTTTAAAC	NA	False	NA	14	True	AATAAA	-15	NA	96058919	96074137	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_96059094_96059995_96060163_96065261_96065446_96069749_96069804_96070584_96070691_96071916_96072001_96073154
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168390	chr8	+	4350	10	FSM	ENSMUSG00000031790.9	ENSMUST00000034243.7	5135	10	-1	786	-1	-786	multi-exon	FALSE	canonical	3	26	junction_5	7.43531778858738	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGTCTACAGGGGCAGA	NA	False	NA	9	True	AATAAA	-18	NA	96078894	96100922	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_96079647_96091941_96092091_96092921_96093051_96094555_96094864_96095186_96095349_96096108_96096363_96096760_96096900_96097323_96097475_96097633_96097750_96098732
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168399	chr8	+	191	1	Intergenic	novelGene_5107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2243	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCATCATGTCTTCTTC	NA	False	NA	NA	False	NA	NA	NA	96127336	96127527	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_96127300_96127500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168423	chr8	-	1888	12	FSM	ENSMUSG00000046707.10	ENSMUST00000056919.9	3773	12	9	1876	9	2	multi-exon	FALSE	canonical	3	171	junction_1	43.8225195891393	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATGGAGCGTATTTAGT	NA	False	NA	-4	True	AATAAA	-15	NA	96215446	96174599	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_96175047_96179977_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96214971
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168443	chr8	+	187	1	Intergenic	novelGene_5108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCCAAATTGCCCCACAT	NA	False	NA	NA	False	TTTAAA	-4	NA	96259802	96259989	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_96259800_96260000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168455	chr8	+	251	1	Intergenic	novelGene_5109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAAGAAACAATTTGGCT	NA	False	NA	NA	False	NA	NA	NA	96325206	96325457	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_96325200_96325500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168461	chr8	+	2464	3	FSM	ENSMUSG00000031669.11	ENSMUST00000034094.11	2519	3	56	-1	-45	1	multi-exon	FALSE	canonical	3	97	junction_2	2	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTTGTCACTAACTGT	NA	False	NA	NA	False	AATAAA	-15	NA	96360136	96371689	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_96360412_96364437_96364672_96369734
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168471	chr8	+	2745	14	FSM	ENSMUSG00000036564.18	ENSMUST00000080666.8	2738	14	-7	0	-7	0	multi-exon	FALSE	canonical	3	13	junction_5	6.1711295754251	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTCGTGTTTCCTATC	NA	False	NA	9	True	AATAAA	-14	NA	96429683	96441584	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_96429806_96432815_96432922_96433158_96433280_96433364_96433428_96433556_96433618_96435235_96435323_96435404_96435462_96435710_96435815_96436393_96436451_96436530_96436583_96437291_96437340_96437561_96437598_96437720_96437773_96439805
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168477	chr8	+	1680	7	FSM	ENSMUSG00000031671.12	ENSMUST00000034096.6	1707	7	24	3	-10	-3	multi-exon	FALSE	canonical	3	236	junction_4	62.8342175004105	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTCAAACTTTCTTTAG	NA	False	NA	36	True	AATAAA	-23	NA	96442532	96445635	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_96442899_96442980_96443123_96443234_96443430_96443548_96443670_96444548_96444730_96444820_96444964_96445103
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168525	chr8	-	7687	49	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-12	13	combination_of_known_junctions	FALSE	canonical	3	306	junction_10	296.058006674321	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96534073	96446770	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168526	chr8	-	7678	49	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-12	13	combination_of_known_junctions	FALSE	canonical	3	313	junction_31	280.538170184657	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96534073	96446770	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168555	chr8	-	7685	49	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	306	junction_10	315.46632081091	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534072	96446783	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168557	chr8	-	7650	49	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_46	305.67686094301	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534061	96446783	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501351_96501906_96502015_96515257_96515533_96533960
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168568	chr8	+	195	1	Intergenic	novelGene_5110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTGAGATAGCGCATGC	429	False	NA	NA	False	NA	NA	NA	96453398	96453593	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_96453400_96453600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168580	chr8	+	193	1	Intergenic	novelGene_5111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGTAATACAAAGCTACA	NA	False	NA	NA	False	NA	NA	NA	96518110	96518303	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_96518100_96518300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168583	chr8	+	212	1	Intergenic	novelGene_5112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATCACAGGGGACAAAGA	NA	False	NA	NA	False	NA	NA	NA	96520678	96520890	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_96520700_96520900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168590	chr8	+	185	1	Intergenic	novelGene_5113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGGGGGGAGGTTGGAGA	NA	False	NA	NA	False	NA	NA	NA	96523693	96523878	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_96523700_96523900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168597	chr8	-	337	3	FSM	ENSMUSG00000110489.2	ENSMUST00000212289.2	338	3	-9	10	4	-10	multi-exon	FALSE	canonical	0	0	junction_1	187	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTTTAAAGTTCAAATAG	NA	False	NA	-14	True	NA	NA	NA	96544315	96535189	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_96535388_96539051_96539129_96544253
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168602	chr8	+	803	1	FSM	ENSMUSG00000061104.6	ENSMUST00000074053.6	789	1	8	-22	8	22	mono-exon	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGTGTCACAAAGAAT	NA	False	NA	NA	False	AATACA	-35	NA	96551981	96552784	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_96552000_96552800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168618	chr8	-	3187	11	NIC	ENSMUSG00000036534.7	novel	3333	12	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_10	98.0688023787382	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTTATCTTCT	NA	False	NA	0	True	AATAAA	-19	NA	96580141	96562547	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96580113
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168619	chr8	-	3288	12	FSM	ENSMUSG00000036534.7	ENSMUST00000040481.4	3333	12	45	0	28	0	multi-exon	FALSE	canonical	2	9	junction_11	95.4970468151409	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTTATCTTCT	NA	False	NA	0	True	AATAAA	-19	NA	96580122	96562547	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580099
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168621	chr8	-	3297	12	FSM	ENSMUSG00000036534.7	ENSMUST00000212270.2	3315	12	22	-4	5	0	multi-exon	FALSE	canonical	3	212	junction_11	48.4964001390441	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTTATCTTCT	NA	False	NA	0	True	AATAAA	-19	NA	96580145	96562547	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168625	chr8	-	3742	11	NIC	ENSMUSG00000036534.7	novel	3333	12	NA	NA	14	0	intron_retention	FALSE	canonical	3	212	junction_10	48.716013794234	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTTATCTTCT	NA	False	NA	0	True	AATAAA	-19	NA	96580136	96562547	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_96564300_96567041_96567097_96568149_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168660	chr8	-	2407	10	NNC	ENSMUSG00000031672.9	novel	2530	10	NA	NA	-33	-1	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	187.671567596028	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTCTGCTTTTCTAC	NA	False	NA	-5	True	AATAAA	-16	NA	96615053	96590762	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_-_96591876_96593444_96593600_96596099_96596266_96597402_96597554_96598518_96598624_96598803_96598966_96601031_96601092_96602373_96602503_96604340_96604498_96614844
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168674	chr8	+	188	1	Intergenic	novelGene_5114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCCATTCAACCAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	96687009	96687197	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_96687000_96687200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168677	chr8	-	185	1	Intergenic	novelGene_5115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAGCTTACAGATAGTGG	NA	False	NA	NA	False	NA	NA	NA	97005856	97005671	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_97005700_97005900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168685	chr8	+	191	1	Intergenic	novelGene_5116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAAGCTTACTGAATAC	NA	False	NA	NA	False	NA	NA	NA	97127842	97128033	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_97127800_97128000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168688	chr8	+	1682	1	FSM	ENSMUSG00000071041.5	ENSMUST00000120826.2	1545	1	-65	-72	-65	72	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTTTAGTGCTAATGGA	NA	False	NA	NA	False	AATAAA	-36	NA	100757124	100758806	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_100757100_100758800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168690	chr8	+	179	1	Intergenic	novelGene_5117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTAAAAAAATGGAACAAATC	NA	False	NA	NA	False	NA	NA	NA	102314077	102314256	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_102314100_102314300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168727	chr8	+	211	1	Intergenic	novelGene_5118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGCTGGGGGCTGGAG	NA	False	NA	NA	False	NA	NA	NA	105098859	105099070	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_105098900_105099100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168744	chr8	-	4602	13	FSM	ENSMUSG00000035770.9	ENSMUST00000041769.8	4627	13	25	0	-7	0	multi-exon	FALSE	canonical	3	129	junction_6	10.797054639525	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTTTGGTGACTTTGTT	1793	False	NA	-1	True	AATAAA	-20	NA	105169654	105144311	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_105147315_105148918_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168748	chr8	-	1813	20	FSM	ENSMUSG00000031878.19	ENSMUST00000034349.10	1808	20	-1	-4	-1	4	multi-exon	FALSE	canonical	3	645	junction_15	52.7352662859429	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGTTGTCTGGAATGGT	3332	False	NA	NA	False	AATAAA	-23	NA	105261270	105237655	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254009_105254082_105254818_105254850_105256687_105256749_105257024_105257129_105261143
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168767	chr8	+	186	1	Intergenic	novelGene_5119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATGTCTTATTTAGGAT	8644	False	NA	NA	False	NA	NA	NA	105288012	105288198	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_105288000_105288200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168775	chr8	-	201	1	Intergenic	novelGene_5120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTCTTTTTTTAAGATT	NA	False	NA	NA	False	NA	NA	NA	105309347	105309146	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_105309100_105309300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168786	chr8	-	800	4	FSM	ENSMUSG00000031879.15	ENSMUST00000163140.2	807	4	0	7	0	0	multi-exon	FALSE	canonical	3	675	junction_1	52.8288641642889	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCAGTATGCCTTAGCG	NA	False	NA	-10	True	AATAAA	-18	NA	105368331	105366479	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_105366719_105367151_105367198_105367599_105367726_105367942
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168793	chr8	+	201	1	Intergenic	novelGene_5121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTGACTGTCCTTCTG	263	False	NA	NA	False	NA	NA	NA	105860911	105861112	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_105860900_105861100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168799	chr8	+	214	1	Intergenic	novelGene_5122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATACGTGCTTCTGAGCTC	1491	False	NA	NA	False	AATAGA	-10	NA	105862139	105862353	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_105862100_105862400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168811	chr8	+	2847	6	FSM	ENSMUSG00000031885.15	ENSMUST00000109392.9	2891	6	52	-8	-3	0	multi-exon	FALSE	canonical	3	129	junction_5	26.6578318698277	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGACTCTTTATTGATA	3813	False	NA	82	True	ATTAAA	-22	NA	105897372	105944621	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_105897686_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929211_105942535
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168852	chr8	+	789	6	FSM	ENSMUSG00000014856.13	ENSMUST00000015000.12	785	6	-4	0	-4	0	multi-exon	FALSE	canonical	3	269	junction_4	56.0556865982391	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCGTGTGGGTGATGATG	247	False	NA	18	True	AATAAA	-20	NA	106052981	106055689	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953_106055091_106055239_106055325_106055403
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168863	chr8	+	911	5	FSM	ENSMUSG00000014856.13	ENSMUST00000126705.9	895	5	-11	-5	-11	0	multi-exon	FALSE	canonical	3	392	junction_2	13.1909059582729	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCGTGTGGGTGATGATG	274	False	NA	18	True	AATAAA	-20	NA	106053008	106055689	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953_106055325_106055403
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168872	chr8	-	1654	8	FSM	ENSMUSG00000013160.8	ENSMUST00000013304.8	1629	8	-19	-6	-19	6	multi-exon	FALSE	canonical	3	556	junction_1	38.5115938016444	284	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTGCTCCCTCCTT	NA	False	NA	-4	True	AATAAA	-24	NA	106292698	106251090	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_106251697_106251788_106251867_106251954_106252132_106252255_106252334_106255805_106255886_106257446_106257626_106265952_106266125_106292414
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168884	chr8	+	193	1	Intergenic	novelGene_5123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTCTCCTGGAGAGGTA	NA	False	NA	NA	False	NA	NA	NA	106303398	106303591	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_106303400_106303600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168896	chr8	-	177	1	Intergenic	novelGene_5124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAATTCTTCCCAC	3603	False	NA	NA	False	NA	NA	NA	106334400	106334223	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_106334200_106334400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168911	chr8	+	3843	12	FSM	ENSMUSG00000005698.16	ENSMUST00000005841.16	3782	12	-61	0	-50	0	multi-exon	FALSE	canonical	3	206	junction_10	73.0190736997323	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGACTCCGTCTTTT	NA	False	NA	38	True	AATAAA	-21	NA	106363149	106409554	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408066
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168915	chr8	+	3834	12	NNC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_11	123.55405013914	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGACTCCGTCTTTT	NA	False	NA	38	True	AATAAA	-21	NA	106363152	106409554	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408072
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168934	chr8	+	192	1	Intergenic	novelGene_5125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGAGATCCATCTGACTA	1762	False	NA	NA	False	NA	NA	NA	106401814	106402006	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_106401800_106402000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168950	chr8	-	1417	11	FSM	ENSMUSG00000038000.11	ENSMUST00000042608.8	3154	11	-1	1738	0	0	multi-exon	TRUE	canonical	3	179	junction_7	13.7637204272682	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGAGAGATTCAGGGG	NA	False	NA	-12	True	AATAAA	-17	NA	106427717	106424788	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106426681_106426913_106426991_106427078_106427173_106427334_106427472_106427551
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168960	chr8	-	1300	8	NNC	ENSMUSG00000013155.11	novel	1275	7	NA	NA	22	2	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_7	45.9436211734623	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTCCATAGGAGCTG	NA	False	NA	-12	True	ATTAAA	-17	NA	106434820	106430280	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_-_106430654_106430744_106430882_106430982_106431147_106431266_106431393_106433197_106433371_106434180_106434376_106434455_106434556_106434788
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168969	chr8	-	1314	8	NNC	ENSMUSG00000013155.11	novel	1275	7	NA	NA	56	2	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_7	49.3529562003563	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTCCATAGGAGCTG	NA	False	NA	-12	True	ATTAAA	-17	NA	106434721	106430280	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_-_106430654_106430744_106430882_106430982_106431147_106431266_106431393_106433197_106433371_106434180_106434376_106434455_106434556_106434675
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168974	chr8	-	192	1	ISM	ENSMUSG00000013150.16	ENSMUST00000013294.16	4352	3	44428	191	44360	-191	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAGGACTGGAAAG	NA	False	NA	NA	False	NA	NA	NA	106440868	106440676	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr8_-_106440700_106440900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168983	chr8	+	151	1	Intergenic	novelGene_5126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTATGGGGAAGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	106480205	106480356	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_106480200_106480400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168988	chr8	+	180	1	Intergenic	novelGene_5127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATGTACTTTTTTTTAT	NA	False	NA	16	True	NA	NA	NA	106486334	106486514	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_106486300_106486500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000168998	chr8	-	5166	14	FSM	ENSMUSG00000037415.8	ENSMUST00000239468.2	5308	14	142	0	-3	0	multi-exon	FALSE	canonical	3	41	junction_3	8.84180495107755	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCTGTTGTTCAGAAT	NA	False	NA	-1	True	ATTAAA	-19	NA	106553840	106494939	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_106498350_106498726_106498839_106499080_106499227_106499669_106499792_106500540_106500746_106500918_106501068_106501166_106501276_106502591_106502705_106506458_106506644_106508911_106508935_106513258_106513427_106532163_106532217_106552709_106552822_106553581
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169005	chr8	+	195	1	Intergenic	novelGene_5128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGCAAGCAGTTCACTGT	NA	False	NA	NA	False	NA	NA	NA	106523626	106523821	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_106523600_106523800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169010	chr8	-	195	1	Intergenic	novelGene_5129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTCTTCAATTTAAAAACA	NA	False	NA	NA	False	NA	NA	NA	106526711	106526516	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_106526500_106526700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169017	chr8	+	190	1	Intergenic	novelGene_5130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	701	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGTCAACTGTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	106530966	106531156	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_106531000_106531200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169021	chr8	+	185	1	Intergenic	novelGene_5131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGTAAAAGAGTAGAAACC	NA	False	NA	NA	False	NA	NA	NA	106533795	106533980	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_106533800_106534000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169027	chr8	-	1791	13	FSM	ENSMUSG00000036672.6	ENSMUST00000040776.6	1814	13	35	-12	-11	8	multi-exon	FALSE	canonical	3	157	junction_3	25.0593739391514	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGATATTGTATTTCTGTTG	NA	False	NA	NA	False	ATTAAA	-24	NA	106578651	106571296	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_106571628_106571705_106571811_106571891_106572069_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576346_106576464_106576556_106578502
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169039	chr8	-	2651	12	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	191	junction_9	18.3816293489087	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTTAGCGATATTGTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	106578640	106571304	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_106571628_106571705_106571811_106571891_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576346_106576464_106576556_106578502
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169046	chr8	+	1873	1	FSM	ENSMUSG00000036442.9	ENSMUST00000040445.9	1819	1	-53	-1	-53	1	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTCGACTTTTTTT	NA	False	NA	13	True	ATTAAA	-20	NA	106581710	106583583	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_106581700_106583600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169054	chr8	+	2002	5	FSM	ENSMUSG00000008450.9	ENSMUST00000008594.9	948	5	21	-1075	-10	1075	multi-exon	FALSE	canonical	3	2641	junction_1	453.90775494587	926	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTCTTTATTCCTAACG	NA	False	NA	31	True	AATAAA	-18	NA	106587232	106607037	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_106587338_106602165_106602291_106602985_106603058_106603141_106603241_106605436
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169069	chr8	+	195	1	Intergenic	novelGene_5132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCAGGAGCCAGGAGGT	NA	False	NA	NA	False	NA	NA	NA	106589541	106589736	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_106589500_106589700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169081	chr8	+	187	1	Intergenic	novelGene_5133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTGACCAAGCAAGACAT	NA	False	NA	NA	False	NA	NA	NA	106597603	106597790	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_106597600_106597800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169097	chr8	+	4777	29	FSM	ENSMUSG00000036270.17	ENSMUST00000040254.16	4780	29	3	0	3	0	multi-exon	FALSE	canonical	3	268	junction_16	54.5128121057194	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTCTTTGATGTGACTA	3259	False	NA	31	True	AATAAA	-23	NA	106607515	106619857	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169099	chr8	+	4763	29	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	3	0	intron_retention	TRUE	canonical	3	128	junction_16	71.6479755328731	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	3259	False	NA	14	True	AATAAA	-6	NA	106607515	106619840	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615227_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169117	chr8	+	4686	29	NIC	ENSMUSG00000036270.17	novel	4645	29	NA	NA	28	-4	intron_retention	FALSE	canonical	3	70	junction_18	95.2952112958378	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTATGTGTGTGATTTT	3284	False	NA	10	True	AATAAA	-2	NA	106607540	106619836	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615227_106615388_106615735_106616173_106616304_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169133	chr8	+	3292	3	FSM	ENSMUSG00000048310.9	ENSMUST00000049699.9	3255	3	-10	-27	-10	27	multi-exon	FALSE	canonical	3	44	junction_1	10	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGACTGTGCCATGGGAC	NA	False	NA	14	True	AATAAA	-44	NA	106627062	106658437	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_106627173_106639251_106640279_106656282
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169139	chr8	-	248	1	Intergenic	novelGene_5134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGCACTGAGGAGGCAG	NA	False	NA	NA	False	AAAAAG	-39	NA	106643090	106642842	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_106642800_106643100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169141	chr8	+	226	1	Intergenic	novelGene_5135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGCTATGAAAGGTCCAAT	8752	False	NA	NA	False	TATAAA	-24	NA	106645044	106645270	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_106645000_106645300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169161	chr8	+	212	1	Intergenic	novelGene_5136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCCAGCCAGGCAGTGG	NA	False	NA	NA	False	NA	NA	NA	106681275	106681487	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_106681300_106681500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169169	chr8	-	164	1	Intergenic	novelGene_5137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTCTTAACCACAGAGCC	NA	False	NA	NA	False	NA	NA	NA	106696193	106696029	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_106696000_106696200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169178	chr8	-	217	1	Intergenic	novelGene_5138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTATGCTTTTGTTAACAT	NA	False	NA	NA	False	AAAACA	-19	NA	106697774	106697557	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_106697600_106697800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169193	chr8	-	1833	1	FSM	ENSMUSG00000045538.7	ENSMUST00000058579.7	2262	1	434	-5	434	5	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATGATTTCTTTTTCTT	NA	False	NA	-4	True	AATAAA	-22	NA	106738080	106736247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_106736200_106738100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169217	chr8	-	175	1	Intergenic	novelGene_5139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGGTTTTTTGAGACA	NA	False	NA	NA	False	NA	NA	NA	106757696	106757521	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_106757500_106757700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169240	chr8	-	183	1	Intergenic	novelGene_5140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTTTAAAAAAAGTTGTA	NA	False	NA	NA	False	NA	NA	NA	106793071	106792888	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_106792900_106793100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169247	chr8	-	193	1	Antisense	novelGene_ENSMUSG00000031902.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAACATTGGTAATAATT	NA	False	NA	NA	False	NA	NA	NA	106825579	106825386	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr8_-_106825400_106825600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169252	chr8	+	193	1	Intergenic	novelGene_5141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATGCTTATAGCCCAGGA	NA	False	NA	NA	False	NA	NA	NA	106839432	106839625	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_106839400_106839600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169263	chr8	+	211	1	Intergenic	novelGene_5142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGGTTGTGAGCCACCA	NA	False	NA	NA	False	NA	NA	NA	106842048	106842259	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_106842000_106842300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169270	chr8	+	2739	6	FSM	ENSMUSG00000031903.8	ENSMUST00000034377.8	2706	6	-33	0	-33	0	multi-exon	FALSE	canonical	3	107	junction_2	8.49941174435031	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCTTGTCCTGCTCTGA	6164	False	NA	14	True	AATAAA	-20	NA	106876997	106891347	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_106877246_106881499_106881657_106886794_106886914_106887212_106887312_106887715_106887941_106889456
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169284	chr8	+	162	2	Antisense	novelGene_ENSMUSG00000033106.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGGGTTTTTTCACGAA	NA	False	NA	NA	False	NA	NA	NA	106917125	106933111	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr8_+_106917172_106932995
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169291	chr8	-	187	1	Intergenic	novelGene_5143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	106917317	106917130	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_106917100_106917300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169296	chr8	-	1530	5	FSM	ENSMUSG00000033106.7	ENSMUST00000035925.7	1246	5	-5	-279	-3	279	multi-exon	FALSE	canonical	3	127	junction_1	2.91547594742265	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCAGTTCTTTTTTAGA	NA	False	NA	-2	True	AATAAA	-22	NA	106937570	106927069	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_106927782_106928862_106928984_106930962_106931173_106936996_106937264_106937350
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169313	chr8	+	3407	18	FSM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	63	2	-24	-2	multi-exon	FALSE	canonical	3	978	junction_13	68.9507622326015	404	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTCTTTGTCTTTTAAA	1882	False	NA	NA	False	ATTAAA	-5	NA	106937630	106979424	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169331	chr8	+	3238	16	FSM	ENSMUSG00000061048.9	ENSMUST00000080797.8	4384	16	-24	1170	-24	-1170	multi-exon	FALSE	canonical	3	35	junction_1	6.02218122167265	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTAGGGGAGTGGATTT	NA	False	NA	9	True	ATTAAA	-23	NA	107237498	107282759	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_107237639_107237855_107237974_107262039_107262114_107263192_107263319_107263447_107263604_107263705_107263851_107265625_107265802_107266426_107266556_107267938_107268125_107270282_107270525_107270748_107270895_107271634_107271860_107274253_107274464_107279020_107279152_107279497_107279645_107281872
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169341	chr8	-	191	1	Antisense	novelGene_ENSMUSG00000061048.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAAAAGAACAATTTTGT	9108	False	NA	NA	False	NA	NA	NA	107284094	107283903	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr8_-_107283900_107284100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169345	chr8	-	209	1	Intergenic	novelGene_5144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGCTGCCGCCAAGGTG	NA	False	NA	NA	False	NA	NA	NA	107300297	107300088	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_107300100_107300300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169356	chr8	+	4469	16	FSM	ENSMUSG00000000303.13	ENSMUST00000000312.12	4430	16	-38	-1	-38	1	multi-exon	FALSE	canonical	3	808	junction_8	93.5918799896658	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCTCACTTGATTTGA	5011	False	NA	27	True	ATTAAA	-19	NA	107329944	107396879	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169370	chr8	+	4415	15	ISM	ENSMUSG00000000303.13	ENSMUST00000000312.12	4430	16	759	0	-33	0	3prime_fragment	FALSE	canonical	3	808	junction_7	90.1298383172967	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	5808	False	NA	26	True	ATTAAA	-18	NA	107330741	107396878	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr8_+_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169430	chr8	+	2259	17	NNC	ENSMUSG00000041438.9	novel	2232	17	NA	NA	-10	6	at_least_one_novel_splicesite	TRUE	canonical	3	60	junction_1	299.962074425668	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTTTAAATTATTTTCT	NA	False	NA	18	True	AATAAA	-23	NA	107620257	107649726	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_+_107620341_107621222_107621384_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169433	chr8	+	2265	17	FSM	ENSMUSG00000041438.9	ENSMUST00000047629.7	2232	17	-25	-8	-10	8	multi-exon	FALSE	canonical	3	1046	junction_1	100.936996902771	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTAAATTATTTTCTAA	NA	False	NA	20	True	AATAAA	-25	NA	107620257	107649728	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_107620345_107621222_107621384_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169451	chr8	+	200	1	Intergenic	novelGene_5145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGTGGGAGGGAGCTTC	NA	False	NA	NA	False	NA	NA	NA	107650519	107650719	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_107650500_107650700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169468	chr8	+	2119	11	FSM	ENSMUSG00000031913.10	ENSMUST00000034388.10	2178	11	64	-5	64	5	multi-exon	FALSE	canonical	3	173	junction_10	19.6532440070335	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTCGTCTCATTTTTG	NA	False	NA	22	True	AATAAA	-22	NA	107757917	107772392	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_107758124_107763268_107763381_107763474_107763623_107765559_107765622_107765721_107765842_107767505_107767663_107768823_107768973_107769245_107769328_107769543_107769764_107771086_107771228_107771670
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169474	chr8	+	211	1	Intergenic	novelGene_5146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGCCTATAAATAAAGTTT	NA	False	NA	NA	False	NA	NA	NA	107760465	107760676	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_107760500_107760700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169496	chr8	-	2960	6	FSM	ENSMUSG00000031916.18	ENSMUST00000034391.4	2954	6	0	-6	0	0	multi-exon	FALSE	canonical	3	27	junction_1	47.5116827738189	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTACTGGTAGCCACTT	NA	False	NA	NA	False	NA	NA	NA	107783316	107772920	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_107773904_107775414_107775763_107776773_107776943_107778844_107779673_107780653_107780862_107782892
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169502	chr8	-	2057	5	FSM	ENSMUSG00000031916.18	ENSMUST00000095517.12	4476	5	3	2416	-2	-2410	multi-exon	FALSE	canonical	3	128	junction_4	10.356157588604	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGCCTGCTGTTCCCGACG	NA	False	NA	-2	True	AATAAA	-18	NA	107783318	107775336	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_107775763_107776773_107776943_107778844_107779673_107780653_107780862_107782892
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169509	chr8	+	3035	5	FSM	ENSMUSG00000031917.13	ENSMUST00000034392.13	3036	5	1	0	1	0	multi-exon	FALSE	canonical	3	714	junction_4	51.2688989544344	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTCCGTATCAACTCT	NA	False	NA	19	True	ATTAAA	-20	NA	107783509	107787563	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_107783623_107783724_107783812_107783904_107784044_107784678_107784820_107785008
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169525	chr8	-	185	1	Intergenic	novelGene_5147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGACCAAAAGCAGGCTG	NA	False	NA	NA	False	NA	NA	NA	107870802	107870617	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_107870600_107870800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169531	chr8	+	4339	5	FSM	ENSMUSG00000031924.5	ENSMUST00000034400.5	4316	5	-22	-1	-22	1	multi-exon	FALSE	canonical	3	1441	junction_2	30.906107810593	709	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGGTTGCTTTTTTTTTTT	NA	False	NA	18	True	AATAAA	-29	NA	107877249	107914104	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_107877506_107896442_107896572_107897022_107897053_107906045_107906075_107910209
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169543	chr8	+	189	1	Intergenic	novelGene_5148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTATACTATCATTCACA	NA	False	NA	NA	False	NA	NA	NA	107923360	107923549	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_107923400_107923500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169547	chr8	-	1554	6	FSM	ENSMUSG00000003849.9	ENSMUST00000003947.9	1553	6	0	-1	0	1	multi-exon	FALSE	canonical	3	129	junction_5	9.8264947972306	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTGGCGCATGCCTTTA	NA	False	NA	-1	True	AATAAA	-19	NA	108129838	108114855	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_108115757_108117676_108117779_108118753_108118868_108119272_108119404_108119479_108119645_108129697
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169556	chr8	+	191	1	Intergenic	novelGene_5149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACCCCCATTATAAAACA	NA	False	NA	11	True	NA	NA	NA	108122387	108122578	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_108122400_108122600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169564	chr8	+	244	1	Intergenic	novelGene_5150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAGAATATACTTATTTT	NA	False	NA	NA	False	AAGAAA	-12	NA	108126717	108126961	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_108126700_108127000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169582	chr8	-	1673	9	FSM	ENSMUSG00000003848.15	ENSMUST00000003946.9	1658	9	-12	-3	-10	0	multi-exon	FALSE	canonical	3	419	junction_2	34.7902195307819	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTGTTTTATTTGGG	NA	False	NA	0	True	AATAAA	-17	NA	108151693	108139117	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_108139816_108142737_108142883_108143625_108143724_108144687_108144859_108144945_108145075_108145331_108145404_108148113_108148245_108151369_108151503_108151597
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169591	chr8	+	4337	24	FSM	ENSMUSG00000031930.12	ENSMUST00000166615.3	4314	24	-23	0	-23	0	multi-exon	FALSE	canonical	3	576	junction_9	55.7196601685668	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGGTGTCAGTGTAGCT	NA	False	NA	11	True	AATAAA	-14	NA	108162973	108285227	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169610	chr8	+	218	1	Intergenic	novelGene_5151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTAGAAAGTGCTGTT	NA	False	NA	NA	False	NA	NA	NA	108280225	108280443	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_108280200_108280400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169613	chr8	-	1594	7	FSM	ENSMUSG00000039067.6	ENSMUST00000044106.6	1581	7	-8	-5	-8	5	multi-exon	FALSE	canonical	3	2367	junction_5	170.70409745782	541	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCTAGTGGTTTGTGT	NA	False	NA	-1	True	ATTAAA	-19	NA	108315104	108307007	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_108307952_108309013_108309106_108310804_108310886_108311494_108311593_108312336_108312430_108313256_108313349_108314910
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169623	chr8	-	163	1	Intergenic	novelGene_5152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAGTAAATCTTTGAAAA	NA	False	NA	NA	False	NA	NA	NA	108315596	108315433	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_108315400_108315600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169625	chr8	+	247	1	Intergenic	novelGene_5153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	354	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCTGACCCATCTTGCTG	NA	False	NA	NA	False	NA	NA	NA	108317903	108318150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_108317900_108318200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169636	chr8	-	2710	2	Intergenic	novelGene_5154	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCCTTGGTCGTGGTGTC	NA	False	NA	NA	False	NA	NA	NA	108408874	108404227	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_108406853_108408789
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169644	chr8	-	185	1	Intergenic	novelGene_5155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGTTTCAGAGTTGGGA	NA	False	NA	NA	False	NA	NA	NA	109890065	109889880	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_109889900_109890100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169662	chr8	-	4455	27	FSM	ENSMUSG00000037993.9	ENSMUST00000042601.9	4463	27	8	0	8	0	multi-exon	TRUE	canonical	3	61	junction_24	17.2223966609053	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGCATTTTAAATCTCC	NA	False	NA	-2	True	AATAAA	-19	NA	110292485	110274642	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_110275116_110276405_110276528_110278194_110278291_110278699_110278826_110278988_110279124_110279221_110279378_110279721_110279877_110279976_110280186_110280779_110280893_110281275_110281384_110281544_110281662_110281751_110281863_110282271_110282413_110282651_110282838_110282988_110283176_110283505_110283644_110284829_110284943_110285275_110285384_110285550_110285713_110286169_110286326_110286717_110286795_110286969_110287089_110287199_110287348_110287931_110288040_110288580_110288769_110289075_110289416_110292122
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169668	chr8	-	345	1	Intergenic	novelGene_5156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAAGTTGGTGGTTTTC	NA	False	NA	NA	False	NA	NA	NA	110316752	110316407	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_110316400_110316800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169671	chr8	-	1831	9	FSM	ENSMUSG00000031730.19	ENSMUST00000123605.9	2039	9	218	-10	15	10	multi-exon	FALSE	canonical	1	150	junction_2	108.396191699709	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTTATTGCTTAAACAT	NA	False	NA	NA	False	AATAAA	-29	NA	110335037	110320098	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334983
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169689	chr8	-	2349	10	FSM	ENSMUSG00000031729.7	ENSMUST00000034164.6	2304	10	-34	-11	-34	11	multi-exon	FALSE	canonical	3	462	junction_2	71.0226880807973	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATGAGTGAATTTGGAT	NA	False	NA	-2	True	AATAAA	-31	NA	110419926	110397945	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_110399274_110402007_110402057_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169700	chr8	-	4296	8	NIC	ENSMUSG00000031729.7	novel	3633	9	NA	NA	-20	4	intron_retention	FALSE	canonical	3	544	junction_2	46.3676523416214	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTGGTCAAATGAGTGAA	NA	False	NA	-9	True	AATAAA	-24	NA	110419912	110397952	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_110399274_110402007_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169745	chr8	-	344	1	Intergenic	novelGene_5157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTGAGACCCTATCAGAG	NA	False	NA	NA	False	NA	NA	NA	110528068	110527724	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_110527700_110528100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169749	chr8	+	193	1	Intergenic	novelGene_5158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATGTCATGTACACAAA	5904	False	NA	NA	False	NA	NA	NA	110528289	110528482	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_110528300_110528500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169752	chr8	+	195	1	Intergenic	novelGene_5159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAATAGCTGGGCAACTG	NA	False	NA	NA	False	NA	NA	NA	110549430	110549625	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_110549400_110549600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169756	chr8	+	4934	5	FSM	ENSMUSG00000044676.11	ENSMUST00000058804.10	3180	5	-23	-1731	-5	0	multi-exon	FALSE	canonical	1	4	junction_2	8.66025403784439	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGCTGAGACTTGCTTC	930	False	NA	NA	False	AATAAA	-16	NA	110806372	110819373	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_110806637_110809309_110809375_110810238_110810416_110810975_110811084_110815053
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169776	chr8	-	1155	9	NNC	ENSMUSG00000003657.10	novel	1431	11	NA	NA	15129	0	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_8	57.2319840648566	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCACCCGTTTCTTGTCG	NA	False	NA	-12	True	AATAAA	-22	NA	110879709	110869169	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_-_110869833_110872283_110872356_110873932_110873987_110874246_110874287_110874674_110874731_110875145_110875224_110875987_110876045_110879261_110879343_110879655
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169798	chr8	-	172	1	Intergenic	novelGene_5160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTCGTCTGTTCATGAT	8951	False	NA	-1	True	NA	NA	NA	111249187	111249015	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_111249000_111249200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169807	chr8	+	3103	19	FSM	ENSMUSG00000010936.12	ENSMUST00000034190.11	3069	19	-30	-4	-16	4	multi-exon	FALSE	canonical	3	368	junction_15	41.1869046070606	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGCCTGCTCCTTCTCTG	7331	False	NA	20	True	AATAAA	-24	NA	111345200	111447034	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949_111437125_111438224_111438344_111439379_111439460_111442058_111442210_111446438
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169818	chr8	+	2436	15	ISM	ENSMUSG00000010936.12	ENSMUST00000212663.2	2605	18	-16	3590	2	106	5prime_fragment	FALSE	canonical	3	404	junction_10	33.1637864951196	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGACACCTCATTGCTT	7349	False	NA	NA	False	CATAAA	-28	NA	111345218	111437421	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169824	chr8	+	2909	18	NIC	ENSMUSG00000010936.12	novel	3069	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_17	108.822098559751	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTCTGCCTGCTCCTTC	7370	False	NA	16	True	AATAAA	-20	NA	111345239	111447030	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949_111437125_111438224_111438344_111439379_111439460_111446438
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169831	chr8	+	4753	14	FSM	ENSMUSG00000033763.15	ENSMUST00000052457.15	4717	14	-36	0	-36	0	multi-exon	FALSE	canonical	3	80	junction_11	11.3147544665827	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCCCGGCTTCCTCCTGGC	NA	False	NA	7	True	AATAAA	-17	NA	111448071	111468032	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_111448423_111452825_111452888_111453006_111453081_111453744_111453830_111453935_111454028_111454108_111454184_111455359_111455518_111455801_111455910_111456654_111456753_111458689_111458811_111463777_111463853_111464203_111464381_111464561_111464728_111464921
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169840	chr8	+	202	1	Intergenic	novelGene_5161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTCAGGAATCTGATAC	NA	False	NA	NA	False	NA	NA	NA	111489874	111490076	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_111489900_111490100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169851	chr8	+	206	1	Intergenic	novelGene_5162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTCAAATTTCAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	111507495	111507701	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_111507500_111507700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169853	chr8	-	4565	26	FSM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	-38	-2	-27	2	multi-exon	FALSE	canonical	3	597	junction_23	101.482656646345	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTGCCACTGTGAAAT	NA	False	NA	-16	True	ATTAAA	-24	NA	111573446	111536868	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169861	chr8	-	4263	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-6	-251	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_25	162.261990620108	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGTGTAGTTTTTGTT	NA	False	NA	-26	True	TATAAA	-19	NA	111573425	111537121	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573334
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169880	chr8	-	4394	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-5	-253	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_25	174.818195849288	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573413	111537123	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573189
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169884	chr8	-	4305	27	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-4	-253	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_16	201.421663160973	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573412	111537123	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169896	chr8	+	171	1	Intergenic	novelGene_5163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAATATATTGT	1525	False	NA	NA	False	NA	NA	NA	111541753	111541924	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_111541800_111541900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169900	chr8	+	2752	19	FSM	ENSMUSG00000031753.17	ENSMUST00000034203.17	2737	19	-12	-3	-2	3	multi-exon	TRUE	canonical	3	332	junction_8	32.668367302671	368	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGTTGGGTCCAGGAA	9616	False	NA	16	True	AATAAA	-21	NA	111573653	111608862	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_111573842_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111600777_111600841_111605637_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608002_111608132_111608362
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169908	chr8	+	227	1	Intergenic	novelGene_5164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATCATTAGTGAAAATAGAA	1277	False	NA	NA	False	TTTAAA	-7	NA	111583926	111584153	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_111583900_111584200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169929	chr8	-	198	1	Intergenic	novelGene_5165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTATTTATTTATTATA	7020	False	NA	NA	False	NA	NA	NA	111623314	111623116	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_111623100_111623300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169932	chr8	-	161	1	Intergenic	novelGene_5166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGGGGAACCTATTTGC	6621	False	NA	NA	False	NA	NA	NA	111637690	111637529	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_111637500_111637700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169938	chr8	+	3821	7	FSM	ENSMUSG00000031749.13	ENSMUST00000034197.5	4396	7	-34	609	-34	-609	multi-exon	FALSE	canonical	3	80	junction_2	8.28653526310404	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTCACTCATCTGTTCT	3003	False	NA	NA	False	ATTAAA	-15	NA	111646519	111698503	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_111646738_111683389_111684683_111688800_111688995_111694048_111694229_111695819_111695866_111696175_111696296_111696733
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169946	chr8	-	3036	12	FSM	ENSMUSG00000015023.8	ENSMUST00000040416.8	2547	12	-34	-455	-34	455	multi-exon	FALSE	canonical	3	259	junction_8	46.4642402265948	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTATAGTGTTTGTACT	7652	False	NA	-16	True	TTTAAA	-4	NA	111724466	111701172	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_111702723_111703060_111703253_111703599_111703763_111705099_111705338_111705667_111705846_111707184_111707300_111707622_111707726_111710212_111710306_111716105_111716242_111717108_111717160_111719688_111719738_111724298
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169956	chr8	+	195	1	Intergenic	novelGene_5167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTAGGAACCAGGTTTT	NA	False	NA	NA	False	NA	NA	NA	111721497	111721692	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_111721500_111721700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169966	chr8	-	6584	12	FSM	ENSMUSG00000033658.17	ENSMUST00000065784.6	3104	12	-7	-3473	-7	2	multi-exon	FALSE	canonical	3	86	junction_11	90.7354705715175	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGTATTTTGTCTGCAT	NA	False	NA	-3	True	AATAAA	-19	NA	111758390	111729817	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111758253
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000169979	chr8	+	199	1	Intergenic	novelGene_5168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATGGCATGCTCCTGTCA	NA	False	NA	NA	False	NA	NA	NA	111749315	111749514	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_111749300_111749500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170004	chr8	+	3386	22	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-3	-2092	at_least_one_novel_splicesite	FALSE	canonical	2	31	junction_1	767.881536711079	68	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGATGTCATGCGCTCTGC	NA	False	NA	19	True	AATAAA	-21	NA	111760507	111782204	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_+_111760541_111760838_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170035	chr8	+	3335	21	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-5	-2087	combination_of_known_junctions	FALSE	canonical	2	137	junction_1	723.09724622626	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATGCGCTCTGCTTCTT	NA	False	NA	24	True	AATAAA	-26	NA	111760542	111782209	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_111760577_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170039	chr8	+	3418	22	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-4	-2095	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_1	768.623438967161	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGATGTCATGCGCTC	NA	False	NA	16	True	AATAAA	-18	NA	111760543	111782201	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_+_111760577_111760803_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170082	chr8	+	170	1	Intergenic	novelGene_5169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGAGGACTGGATTAGAT	NA	False	NA	NA	False	NA	NA	NA	111817611	111817781	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_111817600_111817800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170089	chr8	-	8145	26	FSM	ENSMUSG00000003316.15	ENSMUST00000169020.8	7021	26	-5	-1119	-5	1119	multi-exon	TRUE	canonical	3	407	junction_22	36.1425178978997	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTCTCTGTAATAAGTG	6423	False	NA	-3	True	AATAAA	-25	NA	111985853	111879933	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111919155_111919360_111924224_111924441_111926767_111926855_111928157_111928191_111985402
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170107	chr8	-	187	1	Intergenic	novelGene_5170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTACAGTCTATAACAAT	NA	False	NA	NA	False	NA	NA	NA	111912930	111912743	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_111912700_111912900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170117	chr8	+	232	1	Intergenic	novelGene_5171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAACACCGTGCCATTTT	3095	False	NA	NA	False	AATAAA	-42	NA	111917244	111917476	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_111917200_111917500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170128	chr8	+	193	1	Intergenic	novelGene_5172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTATATGAGTACACTG	1702	False	NA	30	True	NA	NA	NA	111942453	111942646	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_111942500_111942600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170134	chr8	+	190	1	Intergenic	novelGene_5173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTTGCAAGATAGACAAC	NA	False	NA	NA	False	NA	NA	NA	111967597	111967787	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_111967600_111967800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170139	chr8	+	182	1	Intergenic	novelGene_5174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAGACATTAGCATT	NA	False	NA	NA	False	NA	NA	NA	111968879	111969061	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_111968900_111969100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170147	chr8	+	172	1	Intergenic	novelGene_5175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGTAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	111973681	111973853	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_111973700_111973900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170155	chr8	+	179	1	Intergenic	novelGene_5176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTGTTTTTGACAGGGTT	NA	False	NA	NA	False	NA	NA	NA	111975255	111975434	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_111975300_111975400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170161	chr8	+	196	1	Intergenic	novelGene_5177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGCTCCAATAAATCCTG	NA	False	NA	NA	False	NA	NA	NA	111982238	111982434	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_111982200_111982400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170167	chr8	+	205	1	Intergenic	novelGene_5178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACAGGAGAAGCCAGGCG	NA	False	NA	NA	False	NA	NA	NA	111990378	111990583	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_111990400_111990600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170173	chr8	+	239	1	Intergenic	novelGene_5179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCATTATAAAGCTCAAC	NA	False	NA	NA	False	ATTAAA	-20	NA	111991259	111991498	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_111991300_111991500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170180	chr8	+	199	1	Intergenic	novelGene_5180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGGAAAAGGGCATACCAC	NA	False	NA	NA	False	NA	NA	NA	111993038	111993237	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_111993000_111993200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170183	chr8	-	4482	13	FSM	ENSMUSG00000033596.6	ENSMUST00000038739.5	4443	13	-32	-7	-32	7	multi-exon	FALSE	canonical	3	323	junction_9	43.0880074833925	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTCCGCCTGTTTACTG	5464	False	NA	-2	True	AATAAA	-24	NA	112026886	111997568	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_111999796_112000442_112000655_112002851_112003067_112004826_112005004_112006517_112006669_112009148_112009378_112009906_112010022_112014689_112014782_112014860_112015044_112017502_112017571_112020622_112020808_112023766_112024275_112026766
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170197	chr8	+	186	1	Intergenic	novelGene_5181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACTTCCCCTGCTTCTTC	8507	False	NA	NA	False	NA	NA	NA	112027362	112027548	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_112027400_112027500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170204	chr8	+	177	1	Intergenic	novelGene_5182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATGCATAAATGTAT	NA	False	NA	NA	False	NA	NA	NA	112032303	112032480	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_112032300_112032500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170213	chr8	-	2271	2	ISM	ENSMUSG00000031959.16	ENSMUST00000211981.2	3618	27	41971	24428	10737	12216	internal_fragment	FALSE	canonical	3	67	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTGCTGCCACCCATGCT	NA	False	NA	NA	False	NA	NA	NA	112206648	112201267	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr8_-_112202830_112205939
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170222	chr8	+	209	1	Intergenic	novelGene_5183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGGTGAGATGGCTCAA	NA	False	NA	NA	False	NA	NA	NA	112203074	112203283	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_112203100_112203300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170225	chr8	+	201	1	Intergenic	novelGene_5184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATACAAGATGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	112203283	112203484	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_112203300_112203500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170234	chr8	+	191	1	Intergenic	novelGene_5185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCAAATCTAGCCTCCG	NA	False	NA	NA	False	NA	NA	NA	112257202	112257393	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_112257200_112257400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170241	chr8	+	181	1	Intergenic	novelGene_5186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAGAGTTGTGATTATGG	NA	False	NA	NA	False	NA	NA	NA	112259469	112259650	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_112259500_112259600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170278	chr8	+	152	1	Intergenic	novelGene_5187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGTAATTCCACTTCCA	NA	False	NA	NA	False	NA	NA	NA	112434655	112434807	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_112434700_112434800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170294	chr8	-	3213	7	FSM	ENSMUSG00000031955.11	ENSMUST00000166232.4	3142	7	-71	0	-71	0	multi-exon	FALSE	canonical	3	36	junction_6	42.5597619040959	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCCTACAGAAATGCTTG	NA	False	NA	-2	True	AATAAA	-17	NA	112470512	112437105	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_112438027_112439232_112439323_112439970_112441069_112441914_112442032_112442246_112442409_112447330_112447964_112470320
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170303	chr8	+	276	1	Intergenic	novelGene_5188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGGTTTTAAAAAATTCAAG	NA	False	NA	NA	False	TTTAAA	-13	NA	112479306	112479582	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_112479300_112479600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170307	chr8	+	200	1	Intergenic	novelGene_5189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACCCAAAAGAGTCACAT	NA	False	NA	NA	False	NA	NA	NA	112489797	112489997	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_112489800_112490000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170315	chr8	-	1272	7	FSM	ENSMUSG00000031954.7	ENSMUST00000034432.7	1178	7	-74	-20	-74	20	multi-exon	FALSE	canonical	3	1827	junction_5	79.8013157786261	380	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGCCGTGCTCCTTCCCT	NA	False	NA	-3	True	AATAAA	-35	NA	112580997	112495102	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_112495420_112505882_112506042_112557501_112557622_112566989_112567118_112568414_112568623_112571725_112571844_112580775
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170322	chr8	+	180	1	Intergenic	novelGene_5190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTAAAAAAAAAAGATT	NA	False	NA	NA	False	NA	NA	NA	112583279	112583459	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_112583300_112583500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170336	chr8	-	209	1	Intergenic	novelGene_5191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGGTCTTATTTTTTAA	NA	False	NA	-17	True	NA	NA	NA	112595976	112595767	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_112595800_112596000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170344	chr8	-	202	1	Intergenic	novelGene_5192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGGAAGCCGGGTGTG	NA	False	NA	NA	False	TTTAAA	-4	NA	112615719	112615517	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_112615500_112615700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170355	chr8	+	199	1	Intergenic	novelGene_5193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCTAACTTGGGGGGG	NA	False	NA	NA	False	NA	NA	NA	112626448	112626647	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_112626400_112626600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170364	chr8	-	242	1	Intergenic	novelGene_5194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAGAATGAGCTCTTTA	NA	False	NA	NA	False	NA	NA	NA	112651222	112650980	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_112651000_112651200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170390	chr8	-	185	1	Intergenic	novelGene_5195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAATAATAATTAGCCAT	NA	False	NA	NA	False	NA	NA	NA	112697151	112696966	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_112697000_112697200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170396	chr8	-	2067	14	FSM	ENSMUSG00000031948.15	ENSMUST00000034426.14	2008	14	-55	-4	-55	4	multi-exon	FALSE	canonical	3	1149	junction_10	189.523538373557	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTGTTACTTTTTCTCC	NA	False	NA	0	True	AATAAA	-20	NA	112738010	112720070	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112737841
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170409	chr8	-	2201	16	FSM	ENSMUSG00000031948.15	ENSMUST00000164470.3	2189	16	-12	0	-3	0	multi-exon	FALSE	canonical	3	76	junction_15	556.875793053432	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCAGTGTTACTTTTT	NA	False	NA	-4	True	AATAAA	-16	NA	112737910	112720074	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112734838_112735019_112735113_112735172_112737841
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170411	chr8	-	2232	15	FSM	ENSMUSG00000031948.15	ENSMUST00000093120.13	2131	15	-101	0	-44	0	multi-exon	FALSE	canonical	3	198	junction_14	463.92143951408	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCAGTGTTACTTTTT	NA	False	NA	-4	True	AATAAA	-16	NA	112737999	112720074	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112734838_112735019_112737841
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170426	chr8	+	1590	1	Antisense	novelGene_ENSMUSG00000031948.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGGGCTGGAGAGATGG	NA	False	NA	NA	False	NA	NA	NA	112729457	112731047	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr8_+_112729500_112731000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170431	chr8	+	2254	3	FSM	ENSMUSG00000033430.11	ENSMUST00000052138.11	3560	3	-21	1327	-21	-1327	multi-exon	FALSE	canonical	3	135	junction_1	1.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCATTTTCTTTGATTTT	NA	False	NA	NA	False	AATAAA	-27	NA	112738008	112745833	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_112738775_112741968_112742094_112744470
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170437	chr8	+	187	1	ISM	ENSMUSG00000033430.11	ENSMUST00000052138.11	3560	3	8871	73	8867	-73	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATTCTGTTTTTGTAAA	NA	False	NA	NA	False	NA	NA	NA	112746900	112747087	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr8_+_112746900_112747100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170442	chr8	+	186	1	Intergenic	novelGene_5196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGAGCAGGAGGAGGACA	NA	False	NA	NA	False	NA	NA	NA	112767295	112767481	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_112767300_112767500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170448	chr8	+	4843	6	FSM	ENSMUSG00000078908.11	ENSMUST00000179926.9	3470	6	0	-1373	0	0	multi-exon	FALSE	canonical	3	24	junction_1	7.91454357496375	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTCAGCCTCTTTTCTT	NA	False	NA	20	True	AATAAA	-21	NA	114362218	114371811	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_114362341_114362743_114362902_114364372_114364718_114365166_114365987_114366318_114366467_114368561
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170451	chr8	+	5012	5	FSM	ENSMUSG00000078908.11	ENSMUST00000035777.10	4998	5	-14	0	-14	0	multi-exon	FALSE	canonical	3	34	junction_3	4.52769256906871	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTCAGCCTCTTTTCTT	NA	False	NA	20	True	AATAAA	-21	NA	114362452	114371811	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_114362902_114364372_114364718_114365166_114365987_114366318_114366467_114368561
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170459	chr8	+	206	1	Intergenic	novelGene_5197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTCACTAATGGTAGTG	NA	False	NA	NA	False	NA	NA	NA	115068813	115069019	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_115068800_115069000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170478	chr8	-	176	1	Intergenic	novelGene_5198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	115554718	115554542	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_115554500_115554700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170499	chr8	+	191	1	Intergenic	novelGene_5199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGCTCGAGGTTGCAGA	NA	False	NA	NA	False	NA	NA	NA	117379092	117379283	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_117379100_117379300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170518	chr8	+	1799	12	FSM	ENSMUSG00000031756.6	ENSMUST00000034205.5	1768	12	-30	-1	-20	1	multi-exon	FALSE	canonical	3	221	junction_1	41.3065540194129	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCAGTTCCTTTGGATGA	NA	False	NA	9	True	AATAAA	-17	NA	117648448	117668243	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_117648523_117649066_117649181_117652820_117653002_117655274_117655321_117657816_117657877_117658332_117658410_117660025_117660203_117661433_117661536_117662932_117662991_117663900_117664014_117667182_117667310_117667573
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170526	chr8	+	4895	4	FSM	ENSMUSG00000047388.11	ENSMUST00000109099.4	4877	4	-18	0	-18	0	multi-exon	FALSE	canonical	3	272	junction_2	31.5066130624456	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTGTGTGAATCTTGT	NA	False	NA	24	True	ATTAAA	-18	NA	117670113	117687184	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_117670490_117679612_117679739_117681452_117681653_117682991
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170553	chr8	-	1137	4	NIC	ENSMUSG00000034424.6	novel	1443	5	NA	NA	64	-162	combination_of_known_splicesites	FALSE	canonical	3	83	junction_3	974.020647739165	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGTGATTTTTATTT	NA	False	NA	-9	True	AATAAA	-16	NA	117720212	117708710	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_117709466_117710546_117710679_117714051_117714116_117720026
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170563	chr8	+	189	1	Intergenic	novelGene_5200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGCTGTTAAGCCTGAC	9068	False	NA	NA	False	NA	NA	NA	117711262	117711451	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_117711300_117711500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170570	chr8	+	3458	11	FSM	ENSMUSG00000052557.12	ENSMUST00000064488.11	2652	11	-154	-652	-154	652	multi-exon	TRUE	canonical	3	16	junction_7	6.18465843842649	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTATTTTCCTAAAAGGGT	NA	False	NA	NA	False	ATTAAA	-19	NA	117884719	117932577	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_117885041_117910239_117910355_117913885_117914237_117917010_117917229_117917402_117917525_117919978_117920092_117920851_117921002_117922504_117922642_117923190_117923320_117930688_117930799_117930885
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170591	chr8	-	183	1	Intergenic	novelGene_5201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATAATGACTATATGACA	NA	False	NA	NA	False	NA	NA	NA	118223303	118223120	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_118223100_118223300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170594	chr8	+	4339	33	FSM	ENSMUSG00000034330.11	ENSMUST00000081232.9	4298	33	-41	0	-41	0	multi-exon	TRUE	canonical	3	77	junction_7	32.3080872228611	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTTCTGTACCTGATCTGT	NA	False	NA	11	True	AATAAA	-23	NA	118224988	118361881	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_118225169_118230873_118231113_118282713_118282858_118284041_118284136_118284807_118284856_118293540_118293626_118294902_118294987_118300079_118300124_118300655_118300729_118304561_118304664_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170625	chr8	+	194	1	Intergenic	novelGene_5202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAGTAATTCTGAGAGC	NA	False	NA	NA	False	NA	NA	NA	119906937	119907131	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_119906900_119907100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170635	chr8	+	2112	5	FSM	ENSMUSG00000074064.7	ENSMUST00000098367.5	2128	5	2	14	2	1	multi-exon	TRUE	canonical	0	0	junction_4	28.3317401512862	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTAAGTCTACTTCAC	1471	False	NA	5	True	ATTAAA	-18	NA	120121618	120137827	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_120122210_120128219_120128333_120129172_120129330_120134294_120134445_120136726
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170647	chr8	+	121	1	Intergenic	novelGene_5203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAAAAAGATCCATAAGGC	NA	False	NA	NA	False	NA	NA	NA	120208373	120208494	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_120208400_120208500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170656	chr8	-	4226	23	FSM	ENSMUSG00000031835.17	ENSMUST00000081381.6	4195	23	-26	-5	-26	5	multi-exon	FALSE	canonical	3	394	junction_22	51.0282088571954	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCATGTGTCGTGCCCC	8115	False	NA	-2	True	AATAAA	-19	NA	120285500	120234889	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170668	chr8	-	4195	23	NNC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-26	1	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_18	111.712413021743	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCTGGCATGTGTCGTG	8115	False	NA	-6	True	AATAAA	-15	NA	120285500	120234893	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268407_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170673	chr8	-	4172	23	NIC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-14	1	combination_of_known_junctions	FALSE	canonical	3	33	junction_22	108.399513584954	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCTGGCATGTGTCGTG	8421	False	NA	-6	True	AATAAA	-15	NA	120285194	120234893	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285128
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170696	chr8	-	3162	5	FSM	ENSMUSG00000034189.6	ENSMUST00000036049.6	3141	5	-10	-11	-10	11	multi-exon	TRUE	canonical	3	107	junction_4	18.9274932307477	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGGGTCTTTTTCTTTC	NA	False	NA	1	True	AATAAA	-30	NA	120301932	120288716	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_120290877_120292382_120292611_120292767_120293214_120294504_120294731_120301830
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170705	chr8	+	169	1	Intergenic	novelGene_5204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAAGAGAGAGGGGGGGG	NA	False	NA	NA	False	NA	NA	NA	120303071	120303240	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_120303100_120303200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170729	chr8	+	190	1	Intergenic	novelGene_5205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTCAGAACCTCCTTGG	NA	False	NA	NA	False	NA	NA	NA	120416979	120417169	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_120417000_120417200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170772	chr8	+	3290	14	FSM	ENSMUSG00000031826.21	ENSMUST00000108988.9	3274	14	-16	0	-16	0	multi-exon	FALSE	canonical	3	740	junction_3	231.479471146212	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	8811	False	NA	39	True	AATAAA	-21	NA	120637536	120684299	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_120637679_120658587_120658657_120663269_120663328_120667851_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170782	chr8	+	3205	13	NIC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_2	404.702050896706	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	8838	False	NA	39	True	AATAAA	-21	NA	120637563	120684299	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_120637679_120658587_120658657_120667851_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170796	chr8	-	2715	8	FSM	ENSMUSG00000031823.15	ENSMUST00000034280.9	3069	8	149	205	149	-205	multi-exon	FALSE	canonical	3	71	junction_3	9.07114735222145	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACCCTCCTGCAGCCCTC	NA	False	NA	-6	True	AATAAA	-18	NA	120828072	120807833	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_120809456_120809968_120810100_120811582_120811665_120812083_120812181_120813367_120813493_120814492_120814824_120819655_120819741_120827830
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170800	chr8	-	203	1	Intergenic	novelGene_5206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGATGTTCATTGAGAACT	NA	False	NA	1	True	NA	NA	NA	121047828	121047625	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_121047600_121047800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170814	chr8	+	192	1	Intergenic	novelGene_5207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACAAACCTCATTCCCCA	NA	False	NA	NA	False	NA	NA	NA	121256954	121257146	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_121257000_121257100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170828	chr8	-	1065	5	FSM	ENSMUSG00000031821.12	ENSMUST00000034278.6	3900	5	206	2629	-64	282	multi-exon	FALSE	canonical	3	1091	junction_3	31.7125763696361	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGAACGGGTTTAATTTC	NA	False	NA	93	True	AATACA	-20	NA	121315837	121308000	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_121308551_121308820_121308948_121312831_121312932_121315463_121315579_121315664
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170838	chr8	+	193	1	Intergenic	novelGene_5208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGAGCTAGCCACACATG	NA	False	NA	NA	False	NA	NA	NA	121369227	121369420	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_121369200_121369400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170865	chr8	+	700	5	FSM	ENSMUSG00000031818.13	ENSMUST00000181586.8	765	5	65	0	-21	0	multi-exon	FALSE	canonical	3	240	junction_1	3735.25865904893	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	False	NA	28	True	AATAAA	-17	NA	121395025	121400946	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_121395115_121396047_121396122_121399463_121399632_121399959_121400092_121400709
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170877	chr8	-	153	1	Intergenic	novelGene_5209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATAAAGGGGGCAAGTT	NA	False	NA	NA	False	NA	NA	NA	121408998	121408845	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_121408800_121409000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170885	chr8	+	208	1	Intergenic	novelGene_5210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCCTCTTCCTCATGCA	NA	False	NA	NA	False	TTTAAA	-1	NA	121451097	121451305	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_121451100_121451300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170889	chr8	+	2847	9	FSM	ENSMUSG00000041515.11	ENSMUST00000047737.10	2847	9	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_1	7.56637297521078	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATGTTTGTTTCTTTTTT	NA	False	NA	18	True	ATTAAA	-22	NA	121463096	121483433	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_121463149_121466555_121466731_121470444_121470629_121472358_121472448_121473941_121474048_121475037_121475086_121480091_121480473_121481126_121481243_121481737
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170901	chr8	+	195	1	Intergenic	novelGene_5211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGTAAGTCCATGCTGG	2176	False	NA	NA	False	NA	NA	NA	121831855	121832050	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_121831900_121832000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170907	chr8	+	202	1	Intergenic	novelGene_5212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCTGAAGTGCACCATCA	NA	False	NA	NA	False	NA	NA	NA	121872452	121872654	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_121872500_121872700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170912	chr8	+	1414	1	FSM	ENSMUSG00000098211.3	ENSMUST00000182145.3	1402	1	-6	-6	-6	6	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGGTCTGGAGAGATGGC	NA	False	NA	NA	False	NA	NA	NA	122268812	122270226	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_122268800_122270200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170914	chr8	+	173	1	NIC	ENSMUSG00000097424.3	novel	618	3	NA	NA	3773	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATGTGTCACAACC	NA	False	NA	NA	False	NA	NA	NA	122274899	122275072	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_122274900_122275100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170941	chr8	-	2659	11	NNC	ENSMUSG00000061410.7	novel	625	6	NA	NA	-5	579	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	10.6470653233649	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGCCCTCTTTGACGTG	NA	False	NA	NA	False	AAAAAG	-8	NA	122379645	122332373	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_-_122332815_122332925_122333057_122333615_122333708_122335128_122335412_122335818_122335874_122335959_122336055_122336855_122336966_122338064_122338137_122345373_122345448_122355304_122355429_122378463
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170947	chr8	-	185	1	Intergenic	novelGene_5213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATCCCACCAGTGGGAGC	NA	False	NA	NA	False	NA	NA	NA	122383214	122383029	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_122383000_122383200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170952	chr8	+	192	1	Intergenic	novelGene_5214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTGACAGGTAAAAACCC	818	False	NA	NA	False	NA	NA	NA	122439054	122439246	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_122439100_122439200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170961	chr8	-	2054	12	FSM	ENSMUSG00000040263.17	ENSMUST00000045884.17	2078	12	7	17	7	3	multi-exon	FALSE	canonical	3	124	junction_5	29.2453287927892	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTCTTTCTTCTACAGA	443	False	NA	-22	True	AATAAA	-20	NA	122556301	122523068	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_122523483_122523656_122523768_122524572_122524976_122526186_122526396_122527877_122527954_122531685_122531846_122533244_122533338_122540445_122540583_122546860_122546960_122548018_122548098_122548520_122548613_122556120
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170985	chr8	-	3371	9	NIC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_8	783.710086702985	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGACTGTGTTCTGTG	NA	False	NA	NA	False	TTTAAA	-18	NA	122634425	122607888	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122633804
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000170986	chr8	-	3440	10	NNC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	736.813275171624	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGACTGTGTTCTGTG	NA	False	NA	NA	False	TTTAAA	-18	NA	122634425	122607888	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_-_122609835_122610329_122610439_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171019	chr8	+	246	1	Intergenic	novelGene_5215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAGTAGTGTATAGGGT	NA	False	NA	NA	False	AATAAA	-15	NA	122732856	122733102	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_122732900_122733100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171039	chr8	+	3722	18	FSM	ENSMUSG00000017478.16	ENSMUST00000093073.12	3705	18	-16	-1	-16	1	multi-exon	FALSE	canonical	3	173	junction_3	41.8252254144417	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTCCTGGTAATGTC	923	False	NA	16	True	AATAAA	-17	NA	123103365	123144100	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_123103540_123110138_123110744_123113600_123113686_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171041	chr8	+	3792	19	FSM	ENSMUSG00000017478.16	ENSMUST00000017622.12	3810	19	19	-1	-15	0	multi-exon	FALSE	canonical	3	64	junction_3	72.8266375428831	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGGTCCTGGTAATGT	924	False	NA	15	True	AATAAA	-16	NA	123103366	123144099	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_123103540_123110138_123110744_123113600_123113686_123114431_123114504_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171054	chr8	-	764	6	FSM	ENSMUSG00000006519.12	ENSMUST00000017604.10	744	6	-12	-8	-12	8	multi-exon	FALSE	canonical	3	631	junction_1	96.6531944635044	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTCTCCATATGAGGCT	NA	False	NA	NA	False	AATAAA	-26	NA	123159681	123151506	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_123151827_123152924_123153007_123153674_123153759_123153967_123154043_123154393_123154464_123159548
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171065	chr8	-	1781	10	FSM	ENSMUSG00000006517.6	ENSMUST00000006692.6	1756	10	-21	-4	-21	4	multi-exon	FALSE	canonical	3	183	junction_4	22.2211110833319	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGGGCTGTGCTTTCTT	NA	False	NA	-4	True	AATAAA	-21	NA	123170182	123160335	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_123160915_123161542_123161652_123163212_123163329_123163748_123163968_123164153_123164229_123164565_123164766_123166115_123166263_123166376_123166492_123166920_123166992_123170032
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171078	chr8	-	1796	6	FSM	ENSMUSG00000014470.5	ENSMUST00000014614.4	1783	6	-10	-3	-10	3	multi-exon	TRUE	canonical	3	110	junction_3	7.81280999384984	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGCCTTGGTCCTGGGTTT	9971	False	NA	-2	True	AATAAA	-20	NA	123202813	123192882	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_123193974_123194700_123194809_123194978_123195094_123195352_123195466_123196938_123197096_123202601
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171088	chr8	+	1704	15	FSM	ENSMUSG00000049482.17	ENSMUST00000116412.8	3066	15	17	1345	17	3	multi-exon	FALSE	canonical	3	114	junction_5	16.7624458787116	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACAGTACTTGTGGGAA	8879	False	NA	17	True	AATAAA	-19	NA	123202898	123208486	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207824_123207964_123208069_123208137_123208209_123208269_123208334
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171097	chr8	-	8199	51	FSM	ENSMUSG00000014444.18	ENSMUST00000156333.9	8219	51	2	18	2	5	multi-exon	FALSE	canonical	3	43	junction_46	25.1307699842245	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGACTGTCACAGACCAATC	6113	False	NA	-16	True	AGTAAA	-20	NA	123278066	123208454	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_123208971_123209048_123209266_123209387_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224_123210414_123211467_123211616_123211700_123211860_123211995_123212211_123212328_123212477_123212562_123212696_123213045_123213359_123213493_123213683_123213748_123214008_123214213_123214421_123214576_123214684_123214813_123214987_123215072_123215130_123215199_123215294_123215837_123215939_123216293_123216366_123216801_123216903_123216977_123217068_123217593_123217766_123217857_123217955_123218053_123218298_123218397_123218552_123219345_123219451_123221528_123221734_123222155_123222357_123222472_123222599_123223141_123223319_123223478_123223640_123224190_123224304_123224544_123224728_123224889_123225039_123225131_123225311_123225398_123225511_123226366_123226625_123226942_123227044_123227900_123227989_123228068_123228156_123228244_123228417_123228504_123228719_123228860_123229051_123232767_123232907_123233004_123233048_123234361_123234485_123240452_123240549_123277713
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171106	chr8	-	153	1	Intergenic	novelGene_5216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCAGAGTGAGCAGGGCC	NA	False	NA	NA	False	NA	NA	NA	123287787	123287634	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_123287600_123287800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171122	chr8	+	2240	10	FSM	ENSMUSG00000006585.4	ENSMUST00000006760.3	2189	10	-33	-18	-33	18	multi-exon	FALSE	canonical	3	858	junction_2	66.8792905627208	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATCTCTTTAAATGCTG	2553	False	NA	45	True	AATAAA	-33	NA	123294720	123299885	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_123295011_123295825_123295985_123296062_123296215_123296642_123296841_123296932_123297079_123297179_123297278_123297979_123298169_123298434_123298588_123298675_123298878_123299232
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171139	chr8	-	886	5	FSM	ENSMUSG00000006589.9	ENSMUST00000006764.9	849	5	-32	-5	-13	3	multi-exon	FALSE	canonical	0	0	junction_3	617.095414016342	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTCCTCAGTTTGTTGC	NA	False	NA	-2	True	AATAAA	-20	NA	123303661	123301370	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_123301767_123301875_123301955_123302140_123302275_123303253_123303361_123303491
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171159	chr8	+	603	5	FSM	ENSMUSG00000015013.10	ENSMUST00000015157.10	1659	5	-13	1069	-7	-1069	multi-exon	FALSE	canonical	3	528	junction_1	75.9884859699152	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACGTTGTCCTGTGTCAG	5509	False	NA	26	True	ACTAAA	-18	NA	123338371	123342330	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_123338433_123339804_123339978_123340659_123340748_123341046_123341127_123342129
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171181	chr8	+	181	1	Intergenic	novelGene_5217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCACTCGTGAGGCAGAG	NA	False	NA	NA	False	NA	NA	NA	123571743	123571924	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_123571700_123571900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171187	chr8	-	160	1	Intergenic	novelGene_5218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAATCATTCAATGGGT	NA	False	NA	0	True	NA	NA	NA	123585219	123585059	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_123585100_123585200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171209	chr8	-	2774	7	ISM	ENSMUSG00000035569.18	ENSMUST00000098334.13	8455	13	-277	13193	-20	5	5prime_fragment	TRUE	canonical	3	162	junction_6	36.6409000374657	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCTTTGTTTTCTCTA	NA	False	NA	0	True	AATAAA	-19	NA	123769036	123623753	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr8_-_123625456_123626342_123626547_123626717_123626889_123635406_123635546_123642639_123642785_123701467_123701532_123768687
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171232	chr8	+	2579	17	FSM	ENSMUSG00000000738.19	ENSMUST00000149248.9	2896	17	317	0	-12	0	multi-exon	FALSE	canonical	3	204	junction_8	27.3615120881504	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCCATGTGTATTGCTT	NA	False	NA	20	True	AGTAAA	-20	NA	123792234	123824499	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171251	chr8	+	782	6	FSM	ENSMUSG00000000740.13	ENSMUST00000000756.6	780	6	-2	0	-2	0	multi-exon	FALSE	canonical	3	17818	junction_5	2681.35350895774	1080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGTTTCTTTGTCTTTT	NA	False	NA	17	True	AATAAA	-18	NA	123829086	123831983	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_123829185_123829391_123829502_123829583_123829726_123829921_123830096_123830636_123830694_123831782
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171258	chr8	+	912	5	NIC	ENSMUSG00000000740.13	novel	780	6	NA	NA	64	0	intron_retention	FALSE	canonical	3	17818	junction_4	2821.04696876886	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGTTTCTTTGTCTTTT	NA	False	NA	17	True	AATAAA	-18	NA	123829152	123831983	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_123829185_123829391_123829502_123829583_123830096_123830636_123830694_123831782
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171260	chr8	+	712	6	NNC	ENSMUSG00000000740.13	novel	780	6	NA	NA	64	0	at_least_one_novel_splicesite	FALSE	canonical	3	503	junction_1	9021.70151578958	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGTTTCTTTGTCTTTT	NA	False	NA	17	True	AATAAA	-18	NA	123829152	123831983	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr8_+_123829185_123829395_123829502_123829583_123829726_123829921_123830096_123830636_123830694_123831782
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171268	chr8	+	2831	1	FSM	ENSMUSG00000064450.3	ENSMUST00000082516.3	86	1	-624	-2121	-624	2121	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGTTTCTTTGTCTTTT	NA	False	NA	17	True	AATAAA	-18	NA	123829152	123831983	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_123829200_123832000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171274	chr8	+	898	5	NIC	ENSMUSG00000000740.13	novel	780	6	NA	NA	89	0	intron_retention	FALSE	canonical	3	17818	junction_4	2909.59597710747	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGTTTCTTTGTCTTTT	NA	False	NA	17	True	AATAAA	-18	NA	123829177	123831983	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_123829502_123829583_123829726_123829921_123830096_123830636_123830694_123831782
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171285	chr8	+	191	1	Intergenic	novelGene_5219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGCTATGTGATCTTG	9061	False	NA	NA	False	NA	NA	NA	123862853	123863044	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_123862900_123863000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171291	chr8	-	1175	7	NIC	ENSMUSG00000000739.15	novel	3805	7	NA	NA	-6	2	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	23.3380947522857	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGACTCTGTCCCAGGCT	9733	False	NA	-5	True	AATAAA	-18	NA	123885019	123869585	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_123869886_123872080_123872262_123874789_123874885_123875048_123875176_123875957_123876173_123884177_123884342_123884926
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171297	chr8	-	2177	7	FSM	ENSMUSG00000000743.10	ENSMUST00000000759.9	2140	7	-30	-7	-27	7	multi-exon	FALSE	canonical	3	428	junction_1	74.3544439380279	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTTTTTTTTAAGGAGT	9715	False	NA	3	True	AATAAA	-23	NA	123939529	123930995	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_123932486_123932882_123933071_123934211_123934341_123934702_123934850_123935759_123935838_123936954_123936975_123939404
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171305	chr8	-	3257	6	NIC	ENSMUSG00000000743.10	novel	2140	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	428	junction_1	71.2673838442243	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTCAGACTTTTTTTTTT	9745	False	NA	-4	True	AATAAA	-16	NA	123939499	123931002	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_123932486_123932882_123933071_123934211_123934341_123934702_123934850_123935759_123936975_123939404
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171310	chr8	+	528	1	FSM	ENSMUSG00000069862.7	ENSMUST00000139165.2	399	1	-82	-47	-82	47	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTGCCTACATTTCAGC	NA	False	NA	NA	False	AATAAA	-43	NA	123933279	123933807	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_123933300_123933800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171319	chr8	+	1654	13	FSM	ENSMUSG00000033862.8	ENSMUST00000036880.8	1642	13	-4	-8	-4	8	multi-exon	FALSE	canonical	3	205	junction_10	22.2279853638006	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGCAATCCTTTAATGT	2121	False	NA	18	True	GATAAA	-19	NA	123951576	123958997	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_123951708_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171336	chr8	+	201	1	Intergenic	novelGene_5220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTCAGAGCGGAAGCCT	NA	False	NA	NA	False	NA	NA	NA	123967739	123967940	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_123967700_123967900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171366	chr8	+	201	1	Intergenic	novelGene_5221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAGATGTAGCTCATACA	542	False	NA	NA	False	NA	NA	NA	124048153	124048354	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_124048200_124048400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171372	chr8	-	197	1	Intergenic	novelGene_5222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACACCCTGTTTGCTCAC	NA	False	NA	NA	False	NA	NA	NA	124053134	124052937	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_124052900_124053100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171379	chr8	+	2359	15	FSM	ENSMUSG00000010154.8	ENSMUST00000010298.7	2330	15	-24	-5	-24	5	multi-exon	FALSE	canonical	3	49	junction_7	8.26752930544105	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTCTCTTTCCCTACAG	NA	False	NA	23	True	NA	NA	NA	124059427	124096259	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_124059760_124073378_124073423_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124086251_124086811_124087002_124087988_124088105_124089757_124089893_124090061_124090130_124093574_124093603_124095416_124095533_124095910
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171398	chr8	+	2682	18	FSM	ENSMUSG00000001472.18	ENSMUST00000108840.4	2582	18	-91	-9	-21	5	multi-exon	TRUE	canonical	3	124	junction_17	99.4416940675849	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGATATGGCCTTTTT	NA	False	NA	17	True	AAGAAA	-22	NA	124100470	124130554	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129885
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171415	chr8	+	2615	18	FSM	ENSMUSG00000001472.18	ENSMUST00000212571.2	2649	18	43	-9	12	5	multi-exon	FALSE	canonical	3	129	junction_17	98.3685253625717	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGATATGGCCTTTTT	NA	False	NA	17	True	AAGAAA	-22	NA	124100534	124130554	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129888
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171426	chr8	+	5034	17	FSM	ENSMUSG00000001472.18	ENSMUST00000211932.2	5002	17	-27	-5	5	5	multi-exon	FALSE	canonical	3	455	junction_12	41.7738984744062	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGATATGGCCTTTTT	NA	False	NA	17	True	AAGAAA	-22	NA	124100567	124130554	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171430	chr8	+	196	1	Intergenic	novelGene_5223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGATGTAACAGCTCATA	NA	False	NA	NA	False	NA	NA	NA	124104304	124104500	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_124104300_124104500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171453	chr8	+	3143	12	FSM	ENSMUSG00000001482.16	ENSMUST00000065534.10	3127	12	-16	0	-16	0	multi-exon	FALSE	canonical	3	130	junction_1	53.2429330273546	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	31	True	TATAAA	-20	NA	124169708	124190009	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_124169791_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171463	chr8	+	3209	13	FSM	ENSMUSG00000001482.16	ENSMUST00000001522.10	3214	13	5	0	-5	0	multi-exon	FALSE	canonical	3	16	junction_1	97.6160278278567	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	31	True	TATAAA	-20	NA	124169729	124190009	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_124169791_124172836_124172924_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171476	chr8	-	184	1	Intergenic	novelGene_5224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAACAATGAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	124193456	124193272	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_124193300_124193500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171482	chr8	+	4266	17	FSM	ENSMUSG00000031967.16	ENSMUST00000001520.13	4227	17	-35	-4	-35	4	multi-exon	FALSE	canonical	3	631	junction_4	44.0414843499853	360	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGAGTTTTGCCTGTAT	7460	False	NA	20	True	TTTAAA	-24	NA	124204606	124230659	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171499	chr8	+	194	1	Intergenic	novelGene_5225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTTCATCTGTGATTCCA	NA	False	NA	NA	False	NA	NA	NA	124371726	124371920	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_124371700_124371900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171505	chr8	-	205	1	Intergenic	novelGene_5226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCTGATCAACAAGAAGGA	NA	False	NA	NA	False	AAAAAG	-9	NA	124372870	124372665	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_124372700_124372900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171508	chr8	+	3492	3	FSM	ENSMUSG00000039960.6	ENSMUST00000045487.4	3371	3	-122	1	-122	-1	multi-exon	FALSE	canonical	3	44	junction_2	0.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTCTTGCTTATTCTAC	NA	False	NA	7	True	AATAAA	-19	NA	124380545	124390622	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_124380956_124382230_124382290_124387599
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171533	chr8	+	176	1	Intergenic	novelGene_5227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGGAGCTTGAA	NA	False	NA	NA	False	NA	NA	NA	124536310	124536486	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_124536300_124536500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171547	chr8	+	187	1	Intergenic	novelGene_5228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTATTTATTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	124597543	124597730	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_124597500_124597700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171554	chr8	-	3668	26	FSM	ENSMUSG00000039509.9	ENSMUST00000044795.8	5808	26	-21	2161	-21	-2161	multi-exon	TRUE	canonical	3	328	junction_14	43.1434815470425	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAAGTCTGTTTTGTCTG	NA	False	NA	-1	True	ATTAAA	-39	NA	124676025	124626022	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171560	chr8	+	181	1	ISM	ENSMUSG00000110547.2	ENSMUST00000212751.2	1895	2	3728	439	3728	-439	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATTTTTTAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	124626739	124626920	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr8_+_124626700_124626900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171564	chr8	-	4091	13	FSM	ENSMUSG00000031974.9	ENSMUST00000075578.7	4306	13	215	0	215	0	multi-exon	TRUE	canonical	3	39	junction_3	9.48536885008813	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCTGTGTGTTATGA	7092	False	NA	0	True	ATTAAA	-18	NA	124709646	124679197	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_124681315_124681461_124681497_124682511_124682556_124685237_124685419_124686948_124687029_124688734_124688945_124689731_124689828_124691729_124691866_124693204_124693352_124694739_124694875_124696458_124696662_124697709_124697911_124709140
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171573	chr8	-	178	1	Intergenic	novelGene_5229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAGACAGAGAGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	124684655	124684477	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_124684500_124684700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171583	chr8	-	162	1	Intergenic	novelGene_5230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTACATATATATGGGGG	NA	False	NA	NA	False	NA	NA	NA	124694129	124693967	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_124694000_124694100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171585	chr8	+	201	1	Intergenic	novelGene_5231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGCCGGGCGTGGTTGCA	NA	False	NA	NA	False	NA	NA	NA	124700682	124700883	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_124700700_124700900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171593	chr8	+	235	2	Antisense	novelGene_ENSMUSG00000031974.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGGGGAGGTTGCAAAAC	NA	False	NA	NA	False	NA	NA	NA	124700682	124710291	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr8_+_124700895_124710268
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171599	chr8	+	191	1	Intergenic	novelGene_5232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAAGGGCTTCCATA	NA	False	NA	NA	False	NA	NA	NA	124703472	124703663	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_124703500_124703700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171608	chr8	-	3023	5	FSM	ENSMUSG00000038697.16	ENSMUST00000165628.9	2973	5	-42	-8	-42	8	multi-exon	FALSE	canonical	3	200	junction_4	173.639713199487	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGCATCTTATTTATA	3663	False	NA	44	True	ATTAAA	-23	NA	124748178	124723048	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_124724846_124729715_124730441_124734929_124735035_124736427_124736573_124747927
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171614	chr8	-	3003	5	FSM	ENSMUSG00000038697.16	ENSMUST00000093039.6	2912	5	-83	-8	-83	8	multi-exon	FALSE	canonical	3	323	junction_4	121.207208944023	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGCATCTTATTTATA	4011	False	NA	44	True	ATTAAA	-23	NA	124747830	124723048	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_124724846_124729715_124730441_124734929_124735035_124736427_124736573_124747599
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171642	chr8	-	209	1	Intergenic	novelGene_5233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGACTGAGCATGCACCC	NA	False	NA	0	True	AATAAA	-8	NA	124791474	124791265	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_124791300_124791500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171658	chr8	+	4126	16	FSM	ENSMUSG00000089704.10	ENSMUST00000034458.9	4113	16	-8	-5	-8	3	multi-exon	FALSE	canonical	3	174	junction_3	15.1299555701778	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGCTGTCAGTCTTGGTC	8557	False	NA	37	True	AATAAA	-27	NA	124958121	125072466	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_124958389_125022096_125022191_125032253_125032408_125050410_125050510_125050730_125050799_125051009_125051076_125054830_125054953_125056451_125056540_125058747_125058836_125059306_125059411_125061013_125061141_125063312_125063406_125064000_125064085_125065181_125065309_125067557_125067678_125070041
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171676	chr8	+	2808	18	FSM	ENSMUSG00000031979.18	ENSMUST00000034460.11	2825	18	17	0	17	0	multi-exon	FALSE	canonical	3	176	junction_7	26.4246660485719	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAGTTATGTATCCAG	NA	False	NA	29	True	AATAAA	-19	NA	125247522	125278747	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171691	chr8	+	185	1	Intergenic	novelGene_5234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTAAAGTGTGAGGCTG	NA	False	NA	NA	False	NA	NA	NA	125272875	125273060	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_125272900_125273100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171697	chr8	+	211	1	Intergenic	novelGene_5235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAAGTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	125322338	125322549	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_125322300_125322500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171699	chr8	-	189	1	Intergenic	novelGene_5236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGAAACAACTGT	NA	False	NA	NA	False	NA	NA	NA	125322744	125322555	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_125322600_125322700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171708	chr8	-	3168	4	FSM	ENSMUSG00000031983.8	ENSMUST00000034464.8	3307	4	140	-1	140	1	multi-exon	FALSE	canonical	3	252	junction_2	4.10960933531265	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATCTGTTTCATTTTCT	NA	False	NA	-2	True	AATAAA	-20	NA	125389968	125362493	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_125364704_125365829_125366355_125378109_125378161_125389586
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171719	chr8	+	189	1	Intergenic	novelGene_5237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTGAGGACCTAGTTCACT	NA	False	NA	NA	False	NA	NA	NA	125385705	125385894	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_125385700_125385900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171726	chr8	-	2938	19	NIC	ENSMUSG00000037300.20	novel	3148	21	NA	NA	-9	6	combination_of_known_junctions	FALSE	canonical	3	125	junction_15	88.9418592170619	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTTGGTCGTTTTGCTA	NA	False	NA	-2	True	ATTAAA	-22	NA	125448731	125398064	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125436641_125436713_125439355_125439432_125440927_125441023_125448475
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171731	chr8	-	2925	19	FSM	ENSMUSG00000037300.20	ENSMUST00000231984.2	2905	19	-15	-5	0	5	multi-exon	FALSE	canonical	3	107	junction_6	106.569342173807	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTTGGTCGTTTTGCT	NA	False	NA	-3	True	ATTAAA	-21	NA	125448722	125398065	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403187_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125436641_125436713_125439355_125439432_125440927_125441023_125448475
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171733	chr8	-	3153	21	NIC	ENSMUSG00000037300.20	novel	3148	21	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	3	107	junction_6	93.2745410066434	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTTGGTCGTTTTGCT	NA	False	NA	-3	True	ATTAAA	-21	NA	125448722	125398065	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403187_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171740	chr8	-	3319	23	NIC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	-4	5	combination_of_known_junctions	FALSE	canonical	3	143	junction_17	103.32721034023	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTTGGTCGTTTTGCT	NA	False	NA	-3	True	ATTAAA	-21	NA	125448726	125398065	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171746	chr8	-	3157	21	FSM	ENSMUSG00000037300.20	ENSMUST00000118134.3	3148	21	-1	-8	-1	5	multi-exon	FALSE	canonical	3	213	junction_17	74.4114238541368	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTTGGTCGTTTTGCT	NA	False	NA	-3	True	ATTAAA	-21	NA	125448723	125398065	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171761	chr8	-	3310	23	FSM	ENSMUSG00000037300.20	ENSMUST00000214828.2	3301	23	-4	-5	-1	4	multi-exon	FALSE	canonical	3	107	junction_6	114.790718661872	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCAGTTTGGTCGTTTTGC	NA	False	NA	-4	True	ATTAAA	-20	NA	125448721	125398066	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403187_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171798	chr8	-	3797	7	FSM	ENSMUSG00000031984.9	ENSMUST00000034465.9	2340	7	86	-1543	-20	0	multi-exon	FALSE	canonical	3	1367	junction_2	144.59416385948	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGCTGTTTTGCCTAC	NA	False	NA	NA	False	AATAAA	-26	NA	125589773	125563683	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_125566706_125567186_125567246_125568032_125568120_125568425_125568522_125569101_125569159_125587684_125588011_125589623
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171812	chr8	+	2919	16	NIC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	-9	-5	combination_of_known_junctions	FALSE	canonical	2	14	junction_3	158.602984419167	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATACCCAATGGTCTTA	5150	False	NA	29	True	AATAAA	-20	NA	125589801	125616791	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_125590052_125597514_125597698_125600071_125600219_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171840	chr8	+	198	1	Intergenic	novelGene_5238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTTTATGTTCTACTG	NA	False	NA	NA	False	NA	NA	NA	125661509	125661707	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_125661500_125661700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171874	chr8	+	3529	1	FSM	ENSMUSG00000050930.6	ENSMUST00000053078.5	3542	1	17	-4	17	4	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTGTTTATTTTTAAT	NA	False	NA	6	True	AATAAA	-19	NA	126396573	126400102	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_126396600_126400100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171881	chr8	-	170	1	Intergenic	novelGene_5239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGAGGTGTGAAGTTTG	NA	False	NA	1	True	NA	NA	NA	126452851	126452681	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_126452700_126452900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171895	chr8	-	181	1	Intergenic	novelGene_5240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAAGTTGTTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	126650367	126650186	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_126650200_126650400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171902	chr8	+	2234	3	FSM	ENSMUSG00000033998.10	ENSMUST00000046765.10	2235	3	1	0	1	0	multi-exon	FALSE	canonical	3	118	junction_2	9	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGGTTTATTACAACT	NA	False	NA	21	True	AATAAA	-18	NA	126721909	126757424	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_126722554_126751750_126752147_126756230
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171924	chr8	+	184	1	Intergenic	novelGene_5241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGCTCATGGTATGAGAA	NA	False	NA	8	True	NA	NA	NA	127303149	127303333	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_127303100_127303300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171933	chr8	-	5124	2	FSM	ENSMUSG00000051495.9	ENSMUST00000054960.9	5080	2	-44	0	-44	0	multi-exon	FALSE	canonical	3	202	junction_1	0	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCCAAGACCTTTTTT	NA	False	NA	-5	True	AATAAA	-22	NA	127320769	127315034	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_-_127318568_127319178
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171937	chr8	+	192	1	Intergenic	novelGene_5242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACACCTACTTGCAGCCTC	NA	False	NA	NA	False	NA	NA	NA	127538796	127538988	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_127538800_127539000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171976	chr8	+	4696	16	NIC	ENSMUSG00000025812.19	novel	4682	16	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	3	20	junction_15	30.4321467457614	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTATGTATTGTTTCTC	NA	False	NA	NA	False	AATAAA	-18	NA	127790819	128129063	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125241_128126878
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000171989	chr8	+	2205	4	FSM	ENSMUSG00000025812.19	ENSMUST00000159940.2	746	4	-21	-1438	-21	0	multi-exon	FALSE	canonical	3	17	junction_1	28.2410261066335	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTCTCTAGTTTT	NA	False	NA	13	True	AATAAA	-21	NA	128306183	128338767	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr8_+_128306285_128319541_128319663_128329539_128329668_128336912
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172005	chr8	-	458	2	Intergenic	novelGene_5243	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	282	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTAGCTCCGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	129480221	129473043	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_129473263_129479982
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172009	chr8	-	92	1	Intergenic	novelGene_5244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTGCCTTAGCTCCGT	NA	False	NA	NA	False	NA	NA	NA	129473140	129473048	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_-_129473000_129473100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172024	chr8	+	227	1	Intergenic	novelGene_5245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATACAATAAAATGTTC	NA	False	NA	NA	False	NA	NA	NA	129898024	129898251	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr8_+_129898000_129898300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172053	chr9	+	3717	12	FSM	ENSMUSG00000025899.15	ENSMUST00000053407.13	3603	12	10	-124	-5	124	multi-exon	FALSE	canonical	2	19	junction_1	15.6162661540793	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGTCTATTTTTTTC	2	True	NA	NA	False	TTTAAA	-41	NA	3335487	3387053	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_3335749_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172059	chr9	-	166	1	Intergenic	novelGene_5246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGATAATAAAGCTACAACT	NA	False	NA	NA	False	NA	NA	NA	3359356	3359190	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_3359200_3359400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172063	chr9	+	4054	18	FSM	ENSMUSG00000025898.7	ENSMUST00000027027.7	4446	18	467	-75	-29	75	multi-exon	TRUE	canonical	3	200	junction_7	32.0504576240346	218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTGCTCACTGCCCCCT	-20	True	NA	24	True	ATTAAA	-24	NA	3404058	3479311	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172096	chr9	+	2809	3	FSM	ENSMUSG00000041124.12	ENSMUST00000212075.2	2800	3	-9	0	-9	0	multi-exon	FALSE	canonical	3	88	junction_1	13	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCTGTCTGAAAGTTTA	-14	True	NA	14	True	AATAAA	-1	NA	4376552	4386870	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_4376624_4383536_4384143_4384738
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172100	chr9	+	207	1	Intergenic	novelGene_5247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCTGGGATCAGGTTAT	NA	False	NA	NA	False	NA	NA	NA	4512764	4512971	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_4512800_4513000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172108	chr9	+	191	1	Intergenic	novelGene_5248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAATCAGAACTGGGA	NA	False	NA	NA	False	NA	NA	NA	6624429	6624620	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_6624400_6624600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172118	chr9	+	193	1	Intergenic	novelGene_5249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTGCCTTAGCCTTTCA	NA	False	NA	NA	False	NA	NA	NA	6837503	6837696	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_6837500_6837700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172126	chr9	+	1263	8	FSM	ENSMUSG00000032002.11	ENSMUST00000215683.2	2421	8	-5	1163	-5	2	multi-exon	FALSE	canonical	3	895	junction_7	57.310824564343	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTCCGTTGAGTGTCAGA	-26	True	NA	26	True	AATAAA	-34	NA	7184514	7207042	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_7184883_7186767_7186860_7188745_7188817_7189161_7189254_7203262_7203372_7203450_7203556_7205297_7205401_7206719
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172139	chr9	+	203	1	ISM	ENSMUSG00000032002.11	ENSMUST00000215683.2	2421	8	22320	1163	3355	2	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTCCGTTGAGTGTCAGA	NA	False	NA	26	True	AATAAA	-34	NA	7206839	7207042	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr9_+_7206800_7207000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172149	chr9	+	675	1	FSM	ENSMUSG00000074516.7	ENSMUST00000213318.2	480	1	-53	-142	-53	142	mono-exon	FALSE	NA	NA	NA	NA	NA	583	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCCAGTCTCAGTGAAG	-3	True	NA	NA	False	AATAAA	-39	NA	7751672	7752347	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_7751700_7752300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172160	chr9	+	2870	5	FSM	ENSMUSG00000050912.16	ENSMUST00000052865.16	2907	5	37	0	37	0	multi-exon	FALSE	canonical	3	248	junction_1	14.5086181285469	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTAGTGTTTTGTTGAA	-39	True	NA	16	True	AATAAA	-19	NA	7764078	7794334	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_7764314_7768290_7768342_7790842_7791110_7791311_7791466_7792171
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172166	chr9	-	3079	7	NIC	ENSMUSG00000057367.13	novel	3331	8	NA	NA	-2	1	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	57.8234861933761	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGATGTGATTCATGAGAT	-22	True	NA	0	True	AATAAA	-22	NA	7837060	7818226	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_7818945_7819021_7819064_7820974_7821221_7825615_7825665_7826931_7827011_7833505_7835381_7836990
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172180	chr9	-	3342	8	FSM	ENSMUSG00000057367.13	ENSMUST00000190341.7	3331	8	-12	1	-5	-1	multi-exon	FALSE	canonical	3	127	junction_2	22.0352222681815	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGATGTGATTCATGAG	-32	True	NA	-2	True	AATAAA	-20	NA	7837070	7818228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_7818945_7819021_7819064_7819307_7819563_7820974_7821221_7825615_7825665_7826931_7827011_7833505_7835381_7836990
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172191	chr9	-	4215	9	FSM	ENSMUSG00000053110.14	ENSMUST00000065353.13	4171	9	-44	0	-44	0	multi-exon	FALSE	canonical	3	70	junction_4	65.3241915372858	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCAACTTTTTTACATT	-2	True	NA	-6	True	AATAAA	-22	NA	8004641	7931999	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_7934734_7936515_7936629_7938408_7938540_7950492_7950541_7952953_7953136_7962289_7962404_7973796_7973913_8001457_8001709_8004115
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172195	chr9	-	4148	8	FSM	ENSMUSG00000053110.14	ENSMUST00000086580.12	4115	8	-33	0	-25	0	multi-exon	FALSE	canonical	3	104	junction_1	48.6117479712088	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCAACTTTTTTACATT	17	False	8004639	-6	True	AATAAA	-22	NA	8004622	7931999	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_7934734_7936515_7936629_7938408_7938540_7952953_7953136_7962289_7962404_7973796_7973913_8001457_8001709_8004115
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172207	chr9	+	188	1	Intergenic	novelGene_5250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATCAAAAGCTAAACGTC	NA	False	NA	NA	False	NA	NA	NA	8013165	8013353	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_8013200_8013400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172209	chr9	-	184	1	Intergenic	novelGene_5251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAGCTTGGATACATGAG	4500	False	NA	NA	False	NA	NA	NA	8038333	8038149	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_8038100_8038300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172217	chr9	-	176	1	Intergenic	novelGene_5252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCTGGAGAGATGGCTCA	NA	False	NA	NA	False	NA	NA	NA	8046553	8046377	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_8046400_8046600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172232	chr9	+	184	1	Intergenic	novelGene_5253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCTCAACAGGACATGCA	NA	False	NA	NA	False	NA	NA	NA	9128886	9129070	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_9128900_9129100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172241	chr9	+	186	1	Intergenic	novelGene_5254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATTTAAA	9187	False	NA	NA	False	NA	NA	NA	9443827	9444013	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_9443800_9444000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172251	chr9	+	193	1	Intergenic	novelGene_5255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCCGGGAGTGGTGGTG	NA	False	NA	NA	False	NA	NA	NA	12550494	12550687	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_12550500_12550700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172258	chr9	+	4127	17	NNC	ENSMUSG00000031918.17	novel	3106	16	NA	NA	-21	2415	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_16	127.425085221671	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTTTTTGATACGAGG	NA	False	NA	NA	False	AATAAA	-15	NA	13660455	13720192	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_+_13660697_13693572_13693679_13694901_13695007_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670_13718567_13719997
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172284	chr9	+	3194	17	NIC	ENSMUSG00000031918.17	novel	3106	16	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	121	junction_4	125.44469336624	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGTCCACAGTTGTCT	NA	False	NA	26	True	ATTAAA	-15	NA	13660474	13717776	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_13660697_13671713_13671785_13693572_13693679_13694901_13695007_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172316	chr9	+	3694	10	FSM	ENSMUSG00000037808.14	ENSMUST00000059579.12	3702	10	-3	11	-3	-11	multi-exon	FALSE	canonical	3	110	junction_7	15.6165470962654	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCTGTAATGAATGACT	NA	False	NA	NA	False	AATAAA	-24	NA	13739008	13757826	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13744267_13744468_13747180_13747229_13747398_13747480_13748132_13748269_13750935_13751038_13755324
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172335	chr9	-	4226	2	FSM	ENSMUSG00000037419.10	ENSMUST00000167549.2	4470	2	229	15	-30	-15	multi-exon	FALSE	canonical	3	20	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCTGTGGGCTATATG	NA	False	NA	-15	True	NA	NA	NA	14292309	14265300	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_14269184_14291966
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172347	chr9	+	192	1	Intergenic	novelGene_5256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTTCTAAGGCCTACTC	NA	False	NA	NA	False	NA	NA	NA	14310863	14311055	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_14310900_14311100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172352	chr9	+	1098	7	FSM	ENSMUSG00000004096.10	ENSMUST00000004200.9	1111	7	17	-4	-13	4	multi-exon	FALSE	canonical	3	777	junction_1	58.5484130157826	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGCTTATAAAAAGTTGC	NA	False	NA	7	True	AATAAA	-31	NA	14411929	14421877	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_14412078_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172362	chr9	+	178	1	Intergenic	novelGene_5257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAACTGTCTAGAAATT	NA	False	NA	NA	False	NA	NA	NA	14583864	14584042	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_14583900_14584000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172367	chr9	-	2244	3	FSM	ENSMUSG00000031931.5	ENSMUST00000216037.2	1037	3	0	-1207	0	5	multi-exon	FALSE	canonical	3	83	junction_2	53	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGTTTGTCTCTGTTTC	NA	False	NA	NA	False	NA	NA	NA	14695822	14691077	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_14692908_14693910_14694259_14695756
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172368	chr9	-	2236	3	FSM	ENSMUSG00000031931.5	ENSMUST00000216372.2	2679	3	279	164	-27	5	multi-exon	FALSE	canonical	3	72	junction_2	58.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGTTTGTCTCTGTTTC	NA	False	NA	NA	False	NA	NA	NA	14695873	14691077	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_14692908_14693910_14694259_14695815
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172405	chr9	-	182	1	Intergenic	novelGene_5258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTAAAAAAAAAAAGAGCT	2433	False	NA	NA	False	NA	NA	NA	14749568	14749386	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_14749400_14749600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172415	chr9	-	2094	5	FSM	ENSMUSG00000031934.15	ENSMUST00000164273.9	5732	5	-19	3657	-19	0	multi-exon	FALSE	canonical	3	51	junction_1	8.13557004763649	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACACCCTCTGTGCCCTTA	NA	False	NA	-4	True	AATAAA	-21	NA	14956793	14917080	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_14917514_14918656_14919316_14921331_14921553_14932677_14932818_14956152
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172426	chr9	-	2458	12	FSM	ENSMUSG00000031935.10	ENSMUST00000034411.10	3964	12	-10	1516	-10	140	multi-exon	TRUE	canonical	3	139	junction_7	15.3563726777577	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAAGTATTTTGTGAAT	NA	False	NA	-2	True	CATAAA	-20	NA	15191237	15173162	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_15173735_15174899_15175060_15176647_15176766_15178709_15178848_15181638_15181824_15182906_15183038_15183802_15183956_15185580_15185666_15185744_15185882_15187141_15187362_15188852_15189020_15190845
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172443	chr9	+	1347	6	FSM	ENSMUSG00000031939.17	ENSMUST00000164079.9	1005	6	-34	-308	16	2	multi-exon	FALSE	canonical	3	288	junction_1	106.167791726116	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTTAAGTGCTTAGCCCA	9088	False	NA	7	True	AATAAA	-18	NA	15217525	15223402	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172452	chr9	+	1342	13	NIC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	171.959055204042	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTATAGTTTGTATGTA	9118	False	NA	7	True	NA	NA	NA	15217555	15228274	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_15217580_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15225561_15226397_15226428_15226678_15226737_15228184
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172456	chr9	+	1224	12	FSM	ENSMUSG00000031939.17	ENSMUST00000213763.2	1216	12	0	-8	0	0	multi-exon	FALSE	canonical	3	217	junction_9	145.029663537447	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTATAGTTTGTATGTA	9118	False	NA	7	True	NA	NA	NA	15217555	15228274	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15225561_15226397_15226428_15226678_15226737_15228184
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172472	chr9	+	1100	7	FSM	ENSMUSG00000031939.17	ENSMUST00000034415.6	1148	7	49	-1	-1	1	multi-exon	FALSE	canonical	3	55	junction_6	190.157317912184	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTTAAGTGCTTAGCCC	9121	False	NA	6	True	AATAAA	-17	NA	15217558	15223401	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15223204
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172487	chr9	+	188	1	Intergenic	novelGene_5259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTACAAGTTTTTAATCT	6932	False	NA	NA	False	NA	NA	NA	15322460	15322648	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_15322500_15322600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172492	chr9	-	146	1	Intergenic	novelGene_5260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATTGTGACAGAAT	NA	False	NA	NA	False	NA	NA	NA	15369005	15368859	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_15368900_15369000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172494	chr9	+	186	1	Intergenic	novelGene_5261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGGAAACCGGATCCATA	NA	False	NA	NA	False	NA	NA	NA	15852793	15852979	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_15852800_15853000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172518	chr9	+	192	1	Intergenic	novelGene_5262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGAAATTTATGACTA	NA	False	NA	NA	False	NA	NA	NA	18287176	18287368	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_18287200_18287400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172522	chr9	+	187	1	Intergenic	novelGene_5263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGCTTCATCTTAGGAAT	NA	False	NA	NA	False	NA	NA	NA	18794421	18794608	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_18794400_18794600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172531	chr9	+	4007	9	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	65.5076331430162	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGGACTGATATTTGTT	NA	False	NA	14	True	AATAAA	-17	NA	19533380	19561027	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553283_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172533	chr9	+	3976	8	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	124	junction_2	34.0665614972351	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGGACTGATATTTGTT	NA	False	NA	14	True	AATAAA	-17	NA	19533380	19561027	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_19533582_19540392_19540503_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172535	chr9	+	4044	9	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-17	0	at_least_one_novel_splicesite	TRUE	canonical	3	26	junction_7	65.1161222355877	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGGACTGATATTTGTT	NA	False	NA	14	True	AATAAA	-17	NA	19533380	19561027	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556507_19556604_19557997
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172587	chr9	-	6283	9	FSM	ENSMUSG00000060510.15	ENSMUST00000174462.8	6283	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	12.7156399760295	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTAATGTTGTTTCTT	NA	False	NA	NA	False	AATAAA	-1	NA	20432713	20406363	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418179_20419314_20419482_20432315_20432416_20432639
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172595	chr9	-	2046	3	FSM	ENSMUSG00000066892.15	ENSMUST00000086458.10	2056	3	13	-3	1	0	multi-exon	FALSE	canonical	3	47	junction_2	23	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTTGCACTTATTTAAC	NA	False	NA	-1	True	ATTAAA	-21	NA	20556050	20549081	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_20550495_20553319_20553393_20555490
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172608	chr9	+	457	5	FSM	ENSMUSG00000084786.10	ENSMUST00000129414.9	2114	5	1485	172	-18	15	multi-exon	FALSE	canonical	3	1046	junction_4	63.2114507031756	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGAGAGTTGTGTGT	NA	False	NA	33	True	AATAAA	-30	NA	20556098	20558088	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_20556190_20556488_20556556_20556701_20556786_20556917_20556956_20557911
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172627	chr9	+	973	4	FSM	ENSMUSG00000032171.8	ENSMUST00000034689.8	3843	4	-2	2872	-2	-2872	multi-exon	FALSE	canonical	3	2626	junction_2	73.4892282356174	212	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGGTGAGGTGTGGG	NA	False	NA	45	True	ATTAAA	-35	NA	20563388	20575008	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_20563494_20566657_20566877_20573593_20573705_20574470
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172637	chr9	-	194	1	Intergenic	novelGene_5264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATACTATTTGAGGCTGGG	NA	False	NA	NA	False	NA	NA	NA	20746848	20746654	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_20746700_20746800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172645	chr9	+	198	1	Intergenic	novelGene_5265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAGCAGTTAAGAGCACT	NA	False	NA	NA	False	NA	NA	NA	20772206	20772404	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_20772200_20772400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172691	chr9	-	1110	11	FSM	ENSMUSG00000070319.7	ENSMUST00000004206.10	1101	11	-8	-1	-8	1	multi-exon	FALSE	canonical	3	2112	junction_10	212.212370044727	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCCTGCTTATTTTCTG	5131	False	NA	0	True	AGTAAA	-17	NA	20809927	20805643	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_20805739_20805928_20806036_20806128_20806266_20806384_20806493_20807123_20807314_20807411_20807517_20809002_20809063_20809183_20809273_20809379_20809464_20809673_20809721_20809839
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172696	chr9	-	1413	9	ISM	ENSMUSG00000070319.7	ENSMUST00000004206.10	1101	11	17	0	0	0	intron_retention	FALSE	canonical	3	2349	junction_1	159.342398626354	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCCTGCTTATTTTCT	5156	False	NA	-1	True	AGTAAA	-16	NA	20809902	20805644	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr9_-_20805739_20805928_20806036_20806128_20806266_20806384_20806493_20807123_20807314_20807411_20807517_20809002_20809063_20809183_20809273_20809379
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172709	chr9	-	5265	39	NIC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	-31	4	combination_of_known_junctions	FALSE	canonical	3	490	junction_35	108.724460496474	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGTGATTGAGTTCTCTG	NA	False	NA	-3	True	AATAAA	-21	NA	20864172	20818500	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172710	chr9	-	5267	39	FSM	ENSMUSG00000004099.17	ENSMUST00000004202.17	5367	39	104	-4	-30	4	multi-exon	TRUE	canonical	3	422	junction_35	116.269340570878	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGTGATTGAGTTCTCTG	NA	False	NA	-3	True	AATAAA	-21	NA	20864171	20818500	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852668_20852880_20852994_20853103_20853878_20853916_20864003
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172725	chr9	-	2816	2	FSM	ENSMUSG00000043895.7	ENSMUST00000054197.7	6394	2	-12	3590	-12	2298	multi-exon	FALSE	canonical	3	250	junction_1	0	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGGTTATGTGTGTGT	8082	False	NA	0	True	AATAAA	-20	NA	20888089	20877246	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_20879867_20887893
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172736	chr9	+	219	1	Intergenic	novelGene_5266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGCTGGAGAGCTGACTC	9336	False	NA	NA	False	AAAACA	-6	NA	20907236	20907455	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_20907200_20907500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172750	chr9	+	1128	9	FSM	ENSMUSG00000003299.11	ENSMUST00000003386.7	1288	9	160	0	-17	0	multi-exon	FALSE	canonical	3	832	junction_5	79.3851371479574	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGGTCACTGCTGTGG	NA	False	NA	26	True	AATAAA	-26	NA	20914193	20920135	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918729_20918837_20918926_20919037_20919118_20919196_20919789
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172770	chr9	+	2537	7	FSM	ENSMUSG00000037405.9	ENSMUST00000086399.6	2535	7	-4	2	-4	-2	multi-exon	FALSE	canonical	3	355	junction_3	34.8456915876586	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGTGAGTTTGTGTAC	NA	False	NA	14	True	AATAAA	-19	NA	20927276	20940111	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_20927398_20930214_20930476_20936839_20937155_20937607_20937896_20938373_20938632_20938727_20938977_20939066
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172772	chr9	+	2535	7	NNC	ENSMUSG00000037405.9	novel	2535	7	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_6	146.235445619575	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGTGAGTTTGTGTAC	NA	False	NA	14	True	AATAAA	-19	NA	20927276	20940111	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_+_20927398_20930214_20930476_20936839_20937155_20937607_20937896_20938373_20938632_20938727_20938975_20939066
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172787	chr9	-	181	1	Intergenic	novelGene_5267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAATCCAAAACCC	6867	False	NA	NA	False	NA	NA	NA	20934925	20934744	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_20934700_20934900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172796	chr9	-	800	5	FSM	ENSMUSG00000079677.3	ENSMUST00000010348.7	812	5	13	-1	-9	1	multi-exon	FALSE	canonical	3	216	junction_3	56.6171352154098	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGACATGTTTTGTGTC	NA	False	NA	-6	True	AATAAA	-13	NA	20984827	20978814	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_20979222_20979325_20979414_20984370_20984478_20984559_20984615_20984684
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172804	chr9	-	3470	13	FSM	ENSMUSG00000010205.12	ENSMUST00000115487.3	3470	13	3	-3	3	3	multi-exon	FALSE	canonical	3	416	junction_7	41.8140725912541	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGGCTGGTTCTTGATA	NA	False	NA	1	True	ATTAAA	-34	NA	21003301	20985450	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172811	chr9	-	3461	13	NIC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_7	131.926642073877	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGCTGGCTGGTTCTTG	NA	False	NA	-2	True	ATTAAA	-31	NA	21003298	20985453	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991465_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172833	chr9	-	4801	25	FSM	ENSMUSG00000032175.12	ENSMUST00000214454.2	4770	25	-29	-2	-29	0	multi-exon	FALSE	canonical	3	60	junction_24	14.2647949512077	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTGTTGCTTGCATTT	NA	False	NA	-2	True	NA	NA	NA	21042568	21015363	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042467
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172847	chr9	-	1645	8	FSM	ENSMUSG00000019471.11	ENSMUST00000019615.11	7851	8	0	6206	0	1525	multi-exon	FALSE	canonical	3	1564	junction_6	89.7352113903194	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGTTCAGTGCTGTTTG	NA	False	NA	-5	True	AATAAA	-21	NA	21061278	21050723	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306_21053430_21053508_21053625_21053717_21053827_21054242_21054522_21061051
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172858	chr9	-	1769	8	NIC	ENSMUSG00000019471.11	novel	7851	8	NA	NA	-20	1522	combination_of_known_junctions	FALSE	canonical	3	62	junction_6	586.784875227641	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGCTGGTTCAGTGCTGT	NA	False	NA	-8	True	AATAAA	-18	NA	21061258	21050726	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306_21053430_21053508_21053625_21053717_21053974_21054242_21054522_21061051
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172864	chr9	+	187	1	Intergenic	novelGene_5268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGCACCCCACACCCAG	NA	False	NA	24	True	NA	NA	NA	21071061	21071248	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_21071100_21071200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172874	chr9	-	177	1	Intergenic	novelGene_5269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTATCCTTGCTGGG	6579	False	NA	NA	False	NA	NA	NA	21085411	21085234	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_21085200_21085400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172880	chr9	-	2947	6	FSM	ENSMUSG00000003308.16	ENSMUST00000049567.10	3172	6	227	-2	-31	1	multi-exon	FALSE	canonical	3	60	junction_5	30.9993548319961	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCTCTGAATTAACCTG	NA	False	NA	2	True	AATAAA	-19	NA	21150140	21141024	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150088
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172884	chr9	-	3956	5	FSM	ENSMUSG00000003308.16	ENSMUST00000164812.8	3614	5	-6	-336	-6	0	multi-exon	FALSE	canonical	3	121	junction_3	9.14808723176599	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGGCTCTGAATTAACC	NA	False	NA	0	True	AATAAA	-17	NA	21150115	21141026	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172892	chr9	-	2634	6	FSM	ENSMUSG00000003308.16	ENSMUST00000193982.2	2163	6	6	-477	-2	-89	multi-exon	FALSE	canonical	3	10	junction_5	50.5663920010119	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGGTCTTCAGAGGGCGG	NA	False	NA	-98	True	AATAAA	-15	NA	21150369	21141451	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150203
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172894	chr9	+	1973	10	FSM	ENSMUSG00000002820.7	ENSMUST00000065005.5	5951	10	-42	4020	-42	7	multi-exon	FALSE	canonical	3	441	junction_8	36.048663953599	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCGTTGTTGACATTTCA	8592	False	NA	28	True	GATAAA	-20	NA	21176546	21185048	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172911	chr9	+	1988	9	NIC	ENSMUSG00000002820.7	novel	2123	10	NA	NA	2	2	intron_retention	FALSE	canonical	3	441	junction_7	37.8068694154911	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCTGGCGTTGTTGACA	8649	False	NA	23	True	GATAAA	-15	NA	21176603	21185043	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172942	chr9	+	3451	22	FSM	ENSMUSG00000057193.9	ENSMUST00000217461.2	3478	22	27	0	-14	0	multi-exon	FALSE	canonical	3	79	junction_1	41.7821257447013	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	6607	False	NA	19	True	AATAAA	-19	NA	21232020	21266324	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172966	chr9	+	4129	22	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	11	0	intron_retention	FALSE	canonical	3	72	junction_21	38.6895897334347	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	5747	False	NA	19	True	AATAAA	-19	NA	21249134	21266324	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172968	chr9	+	3448	22	FSM	ENSMUSG00000057193.9	ENSMUST00000034697.8	3456	22	11	-3	11	0	multi-exon	FALSE	canonical	3	114	junction_21	32.3776608971381	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	5747	False	NA	19	True	AATAAA	-19	NA	21249134	21266324	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172972	chr9	+	3620	23	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_22	51.5317642553865	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	5747	False	NA	19	True	AATAAA	-19	NA	21249134	21266324	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296_21264469_21264977
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172990	chr9	+	3582	20	FSM	ENSMUSG00000032178.15	ENSMUST00000067646.12	3549	20	-30	-3	-30	2	multi-exon	FALSE	canonical	3	965	junction_18	395.630525194118	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCTCAGGCCTGGGT	NA	False	NA	118	True	AATAAA	-16	NA	21279136	21316659	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000172995	chr9	+	3620	21	NIC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	-29	2	combination_of_known_junctions	FALSE	canonical	3	965	junction_19	396.045376188133	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCTCAGGCCTGGGT	NA	False	NA	118	True	AATAAA	-16	NA	21279137	21316659	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173017	chr9	+	3712	18	FSM	ENSMUSG00000032178.15	ENSMUST00000115414.3	3606	18	-108	2	24	-2	multi-exon	FALSE	canonical	3	922	junction_17	371.198684895057	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTACTTGAGTCTTCATT	NA	False	NA	30	True	AATACA	-19	NA	21279190	21313097	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173032	chr9	+	1346	10	FSM	ENSMUSG00000002825.9	ENSMUST00000002902.8	1316	10	-25	-5	-25	5	multi-exon	FALSE	canonical	3	687	junction_5	65.5845510263914	305	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTGTCTGTCTTCTT	2344	False	NA	47	True	TATAAA	-33	NA	21323107	21331575	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_21323394_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328684_21329579_21329719_21330586_21330663_21330734_21330845_21330920_21331009_21331331
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173050	chr9	+	3540	21	FSM	ENSMUSG00000033335.18	ENSMUST00000072362.14	3502	21	-36	-2	1	2	multi-exon	TRUE	canonical	2	327	junction_20	112.703715555433	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGTGGGCCTTTTGTGT	5843	False	NA	22	True	AATAAA	-32	NA	21336204	21418438	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173064	chr9	+	3509	20	NIC	ENSMUSG00000033335.18	novel	3502	21	NA	NA	-4	2	combination_of_known_junctions	FALSE	canonical	2	224	junction_13	132.11218266634	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGTGGGCCTTTTGTGT	5862	False	NA	22	True	AATAAA	-32	NA	21336223	21418438	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173066	chr9	+	3036	20	NIC	ENSMUSG00000033335.18	novel	3510	21	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	156	junction_19	153.943760641486	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCAGATGTGTCTCCTT	5862	False	NA	20	True	AATAAA	-21	NA	21336223	21419055	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21418718
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173068	chr9	+	3518	21	FSM	ENSMUSG00000033335.18	ENSMUST00000173397.8	3510	21	-4	-4	-4	2	multi-exon	FALSE	canonical	2	185	junction_20	132.122244531343	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGTGGGCCTTTTGTGT	5862	False	NA	22	True	AATAAA	-32	NA	21336223	21418438	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417631
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173081	chr9	+	3505	20	NIC	ENSMUSG00000033335.18	novel	3510	21	NA	NA	-3	2	combination_of_known_junctions	FALSE	canonical	2	185	junction_19	149.780670673753	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGTGGGCCTTTTGTGT	5863	False	NA	22	True	AATAAA	-32	NA	21336224	21418438	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417631
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173104	chr9	-	1448	3	FSM	ENSMUSG00000032180.12	ENSMUST00000213316.2	1454	3	4	2	4	0	multi-exon	FALSE	canonical	3	564	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGCCTGGTGACTGGGCT	NA	False	NA	-5	True	AATAAA	-19	NA	21421479	21418850	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_21419688_21420226_21420648_21421289
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173106	chr9	-	1335	4	FSM	ENSMUSG00000032180.12	ENSMUST00000034698.9	1378	4	43	0	-22	0	multi-exon	FALSE	canonical	3	533	junction_2	14.8548533034381	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGCCTGGTGACTGGGCT	NA	False	NA	-5	True	AATAAA	-19	NA	21421505	21418850	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_21419688_21420226_21420411_21420549_21420648_21421289
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173109	chr9	-	1278	4	FSM	ENSMUSG00000032180.12	ENSMUST00000214576.2	1013	4	47	-312	0	0	multi-exon	FALSE	canonical	3	33	junction_2	250.551835399827	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGCCTGGTGACTGGGCT	NA	False	NA	-5	True	AATAAA	-19	NA	21421483	21418850	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_21419688_21420226_21420411_21420584_21420648_21421289
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173124	chr9	+	191	1	Intergenic	novelGene_5270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATACCAGAAAGATACCAAA	NA	False	NA	NA	False	NA	NA	NA	21423065	21423256	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_21423100_21423300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173139	chr9	+	185	1	Intergenic	novelGene_5271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCCAACAAAACAAAAGCTAG	NA	False	NA	NA	False	NA	NA	NA	21452655	21452840	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_21452700_21452800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173142	chr9	+	3446	16	FSM	ENSMUSG00000032185.16	ENSMUST00000034703.15	3220	16	-214	-12	-214	-8	multi-exon	FALSE	canonical	3	1025	junction_5	67.5234938537856	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGTAGTCTCCAGGGTC	NA	False	NA	32	True	AATAAA	-34	NA	21457975	21500775	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173151	chr9	+	3355	15	FSM	ENSMUSG00000032185.16	ENSMUST00000115394.8	3320	15	-35	0	-6	0	multi-exon	FALSE	canonical	3	1025	junction_5	69.6438461468237	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCAAAACAGCAGGGTA	NA	False	NA	20	True	AATAAA	-22	NA	21458183	21500763	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173153	chr9	+	3157	15	FSM	ENSMUSG00000032185.16	ENSMUST00000115395.10	3152	15	-25	20	-6	0	multi-exon	FALSE	canonical	3	70	junction_14	283.604972827073	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCAAAACAGCAGGGTA	NA	False	NA	20	True	AATAAA	-22	NA	21458183	21500763	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499344
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173165	chr9	+	3596	14	FSM	ENSMUSG00000032185.16	ENSMUST00000154049.8	3585	14	-11	0	-1	0	multi-exon	FALSE	canonical	3	1025	junction_5	70.328224573052	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCAAAACAGCAGGGTA	NA	False	NA	20	True	AATAAA	-22	NA	21458207	21500763	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173181	chr9	-	2011	9	ISM	ENSMUSG00000032182.16	ENSMUST00000078572.9	1894	10	29	2	29	-2	intron_retention	FALSE	canonical	3	66	junction_4	11.9032558571174	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCACGCCCATGGTGAC	6153	False	NA	-18	True	AATAAA	-15	NA	21504039	21499979	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr9_-_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173187	chr9	+	2950	2	FSM	ENSMUSG00000048429.11	ENSMUST00000062125.11	3170	2	202	18	202	-18	multi-exon	FALSE	canonical	3	163	junction_1	0	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTTATTCACCCTCCAT	4713	False	NA	16	True	ATTAAA	-25	NA	21504219	21507248	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_21504367_21504445
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173206	chr9	+	5451	34	FSM	ENSMUSG00000032187.17	ENSMUST00000034707.15	6354	34	54	849	-41	2	multi-exon	FALSE	canonical	3	423	junction_28	87.1904283674422	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTCCCTGGACTCCT	1291	False	NA	24	True	AATAAA	-21	NA	21527518	21614664	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173217	chr9	-	199	1	Intergenic	novelGene_5272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAGCCCAGGCTGGAACT	NA	False	NA	NA	False	NA	NA	NA	21540176	21539977	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_21540000_21540200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173221	chr9	+	199	1	Intergenic	novelGene_5273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGATAATGAGGAATGCA	NA	False	NA	NA	False	NA	NA	NA	21609757	21609956	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_21609800_21610000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173272	chr9	-	6436	49	NIC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	53	junction_27	42.5310701379983	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGGTGTGCTGACAG	6275	False	NA	NA	False	TTTAAA	-18	NA	21763912	21711475	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714415_21715905_21715921_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078_21737172_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173273	chr9	-	6462	49	NIC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	57	junction_26	41.3909156615984	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGGTGTGCTGACAG	6261	False	NA	NA	False	TTTAAA	-18	NA	21763926	21711475	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714415_21715905_21715921_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21740769_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173274	chr9	-	6545	50	NIC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	27	junction_27	45.6108432419436	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGGTGTGCTGACAG	6271	False	NA	NA	False	TTTAAA	-18	NA	21763916	21711475	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714415_21715905_21715921_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078_21737172_21740769_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173286	chr9	+	192	1	Intergenic	novelGene_5274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGCTAGGAGTTGGAGC	3118	False	NA	NA	False	NA	NA	NA	21738788	21738980	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_21738800_21739000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173309	chr9	-	189	1	Intergenic	novelGene_5275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTTTCCCCGTTGTGTC	7904	False	NA	NA	False	NA	NA	NA	21802020	21801831	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_21801800_21802000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173312	chr9	-	204	1	Intergenic	novelGene_5276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTATGGGTGTTTTGCCTA	5594	False	NA	NA	False	NA	NA	NA	21804330	21804126	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_21804100_21804300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173338	chr9	+	1845	2	FSM	ENSMUSG00000051238.7	ENSMUST00000053583.7	1838	2	-5	-2	-5	2	multi-exon	FALSE	canonical	3	72	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGACTCTGGTGGTCTGTG	NA	False	NA	10	True	NA	NA	NA	21867045	21869562	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_21867301_21867972
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173350	chr9	+	200	1	Intergenic	novelGene_5277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATCCCTGAGGGCTGGA	NA	False	NA	NA	False	NA	NA	NA	21876595	21876795	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_21876600_21876800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173362	chr9	+	2039	18	FSM	ENSMUSG00000003402.15	ENSMUST00000003493.9	2012	18	-24	-3	-24	3	multi-exon	TRUE	canonical	3	461	junction_11	125.012497645132	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTGTTTTTTAATTTC	NA	False	NA	23	True	AATAAA	-19	NA	21914289	21925521	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173363	chr9	+	2062	18	FSM	ENSMUSG00000003402.15	ENSMUST00000115331.10	1983	18	-72	-7	-24	5	multi-exon	FALSE	canonical	3	290	junction_11	154.653737577573	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTTTTTAATTTCAT	NA	False	NA	25	True	AATAAA	-21	NA	21914289	21925523	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922893_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173405	chr9	-	1676	9	FSM	ENSMUSG00000066839.13	ENSMUST00000180180.8	1676	9	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_8	49.2772767104677	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGGCCCTGTGGCTTC	5885	False	NA	-9	True	AATAAA	-15	NA	21996734	21983541	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21995318_21995505_21996652
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173410	chr9	-	1478	8	FSM	ENSMUSG00000066839.13	ENSMUST00000179422.8	1462	8	-16	0	9	0	multi-exon	TRUE	canonical	3	16	junction_7	78.0418516710419	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGGCCCTGTGGCTTC	5905	False	NA	-9	True	AATAAA	-15	NA	21996714	21983541	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21996644
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173420	chr9	+	230	1	Intergenic	novelGene_5278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGAACCATACGGAGTGA	NA	False	NA	NA	False	TTTAAA	-17	NA	21987027	21987257	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_21987000_21987300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173440	chr9	-	187	1	Intergenic	novelGene_5279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATACAGGCAAAATATCC	785	False	NA	NA	False	NA	NA	NA	22035627	22035440	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_22035400_22035600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173449	chr9	-	1409	5	FSM	ENSMUSG00000001348.16	ENSMUST00000069330.14	1356	5	-53	0	-37	0	multi-exon	FALSE	canonical	3	129	junction_4	52.4374627532645	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTGTCATCAAGGTTA	8859	False	NA	-19	True	AATAAA	-21	NA	22043164	22038022	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22043032
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173459	chr9	-	1337	5	NNC	ENSMUSG00000001348.16	novel	1356	5	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_4	83.7048385698222	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTGTCATCAAGGTTA	9078	False	NA	-19	True	AATAAA	-21	NA	22042945	22038022	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22042885
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173476	chr9	+	199	1	Intergenic	novelGene_5280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCAAAGGCCTTGCC	NA	False	NA	NA	False	NA	NA	NA	22053189	22053388	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_22053200_22053400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173497	chr9	+	5273	5	FSM	ENSMUSG00000057982.9	ENSMUST00000215618.2	1313	5	-49	-3911	-11	0	multi-exon	FALSE	canonical	3	112	junction_4	21.3717102731625	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCCTTGGTTGTGTTTTG	729	False	NA	14	True	NA	NA	NA	22136998	22154650	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_22137129_22146315_22146443_22147497_22147591_22148970_22149081_22149837
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173507	chr9	-	3606	5	FSM	ENSMUSG00000062794.9	ENSMUST00000086281.5	3574	5	-31	-1	-31	1	multi-exon	FALSE	canonical	3	33	junction_1	12.747548783982	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTAGTCTGAGATGTAGG	NA	False	NA	NA	False	AATAAA	-17	NA	22171222	22158724	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_22161837_22162823_22162928_22165150_22165244_22169340_22169468_22171052
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173515	chr9	+	193	1	Intergenic	novelGene_5281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAATCAAAGGAAACCTG	NA	False	NA	NA	False	NA	NA	NA	22178413	22178606	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_22178400_22178600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173529	chr9	-	196	1	Intergenic	novelGene_5282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAATCTATATCCTAT	NA	False	NA	NA	False	NA	NA	NA	22227191	22226995	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_22227000_22227200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173531	chr9	-	234	1	Intergenic	novelGene_5283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAATTGGATCAAAGAAT	8656	False	NA	NA	False	NA	NA	NA	22231435	22231201	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_22231200_22231400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173539	chr9	-	5413	24	FSM	ENSMUSG00000036777.9	ENSMUST00000040912.9	4605	24	-9	-799	-9	799	multi-exon	FALSE	canonical	3	398	junction_4	55.8021416884086	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGACTGGCTGTTATTG	7174	False	NA	NA	False	AATAAA	-20	NA	22300493	22242508	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173554	chr9	-	4568	24	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_15	117.524738979552	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	7217	False	NA	-3	True	AATAAA	-20	NA	22300450	22243307	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274215_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173565	chr9	+	196	1	Intergenic	novelGene_5284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTGGTTTCTAGGAACA	NA	False	NA	NA	False	NA	NA	NA	22284726	22284922	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_22284700_22284900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173569	chr9	-	160	1	Intergenic	novelGene_5285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCATTCTTCTGAAAGTAA	NA	False	NA	NA	False	NA	NA	NA	22307931	22307771	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_22307800_22307900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173573	chr9	+	177	1	Intergenic	novelGene_5286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAACTGTTTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	22311025	22311202	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_22311000_22311200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173583	chr9	-	1157	6	FSM	ENSMUSG00000032239.11	ENSMUST00000034763.10	1134	6	-23	0	-13	0	multi-exon	FALSE	canonical	3	365	junction_2	10.1311401135312	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGTCATTATTAATACAG	9487	False	NA	-1	True	AATAAA	-23	NA	22379667	22359606	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_22360151_22361097_22361160_22365074_22365167_22368668_22368799_22370006_22370038_22379369
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173592	chr9	+	3520	22	FSM	ENSMUSG00000035919.17	ENSMUST00000147712.8	3495	22	-19	-6	-3	0	multi-exon	FALSE	canonical	3	19	junction_1	15.2048745018425	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGGACTGAATTTATAA	NA	False	NA	3	True	AATAAA	-20	NA	22387007	22799576	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_22387487_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173608	chr9	+	183	1	Intergenic	novelGene_5287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATATATACCATTTTCC	NA	False	NA	NA	False	NA	NA	NA	22653929	22654112	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_22653900_22654100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173623	chr9	-	3576	23	FSM	ENSMUSG00000043067.16	ENSMUST00000142064.8	3489	23	-84	-3	-84	1	multi-exon	TRUE	canonical	3	87	junction_1	49.1071732317176	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGTGTTTTCTGCCTGC	NA	False	NA	-2	True	AATAAA	-22	NA	24414520	24323070	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_24324283_24325533_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173635	chr9	-	204	1	Intergenic	novelGene_5288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATATTTTCTAATGATC	NA	False	NA	NA	False	NA	NA	NA	24733624	24733420	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_24733400_24733600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173651	chr9	+	2504	13	NIC	ENSMUSG00000001833.18	novel	2533	14	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	380.283474310064	552	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTCTTGTATATTCT	NA	False	NA	22	True	AATAAA	-22	NA	25163758	25219867	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_25163996_25176689_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25209205_25210787_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173670	chr9	+	215	1	Intergenic	novelGene_5289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGACCATTATTCTTTT	NA	False	NA	NA	False	NA	NA	NA	25778260	25778475	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_25778300_25778500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173678	chr9	-	3677	19	FSM	ENSMUSG00000036395.16	ENSMUST00000066560.13	3688	19	12	-1	12	0	multi-exon	FALSE	canonical	3	9	junction_2	5.66884489725515	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTTTGTGTCTGGGGA	NA	False	NA	NA	False	AATAAA	-16	NA	26717752	26674339	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_26676120_26676397_26676515_26676875_26676988_26677280_26677369_26678372_26678452_26678690_26678763_26679015_26679157_26679714_26679822_26680331_26680413_26681035_26681174_26682323_26682409_26685268_26685340_26689314_26689397_26691969_26692063_26703077_26703187_26705378_26705475_26706081_26706151_26707701_26707900_26717593
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173699	chr9	+	973	8	FSM	ENSMUSG00000035443.11	ENSMUST00000039161.10	918	8	-53	-2	-41	0	multi-exon	FALSE	canonical	3	218	junction_7	172.705955134082	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAAGTGTTTTCTTCTAA	NA	False	NA	36	True	AATAAA	-17	NA	26910964	26918632	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_26911062_26911246_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918096_26918248_26918453
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173705	chr9	+	819	7	FSM	ENSMUSG00000035443.11	ENSMUST00000213770.2	775	7	-36	-8	-36	2	multi-exon	FALSE	canonical	3	323	junction_6	112.305634567263	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTGTTTTCTTCTAAAC	NA	False	NA	38	True	AATAAA	-19	NA	26910969	26918634	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_26911062_26911246_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918453
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173714	chr9	-	3618	6	FSM	ENSMUSG00000031988.11	ENSMUST00000034470.11	3575	6	-39	-4	-39	4	multi-exon	FALSE	canonical	3	156	junction_3	12.273548794053	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGGTCTTTCCTTCTT	NA	False	NA	1	True	NA	NA	NA	26941400	26919062	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_26921334_26921659_26921803_26924020_26924197_26926452_26926618_26930613_26930771_26940694
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173758	chr9	-	1961	9	FSM	ENSMUSG00000031990.16	ENSMUST00000034472.16	1942	9	-19	0	6	0	multi-exon	FALSE	canonical	3	88	junction_8	42.8396355610082	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGTTTGTATTTTTTTT	NA	False	NA	-1	True	ATTAAA	-14	NA	27066708	27008679	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27066586
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173777	chr9	-	196	1	Intergenic	novelGene_5290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTGCCTTTTCCATC	NA	False	NA	NA	False	NA	NA	NA	27050648	27050452	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_27050500_27050600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173785	chr9	+	185	1	Intergenic	novelGene_5291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATTTGACAAATAATAACAA	NA	False	NA	NA	False	NA	NA	NA	29887754	29887939	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_29887800_29887900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173802	chr9	+	194	1	Intergenic	novelGene_5292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCAGCTCCATTCCACTT	NA	False	NA	NA	False	NA	NA	NA	30469890	30470084	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_30469900_30470100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173804	chr9	+	1506	1	Intergenic	novelGene_5293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTCTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	30558683	30560189	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_30558700_30560200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173810	chr9	+	3651	9	FSM	ENSMUSG00000031994.14	ENSMUST00000068135.13	3631	9	-19	-1	-19	1	multi-exon	TRUE	canonical	3	22	junction_2	5.53257399408268	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTGTCTAGTCTGGTTC	NA	False	NA	NA	False	ACTAAA	-19	NA	30853838	30874153	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_30854898_30862561_30862802_30863890_30864027_30864651_30864820_30865762_30866068_30867791_30867976_30870209_30870383_30870497_30870674_30872943
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173818	chr9	+	191	1	Intergenic	novelGene_5294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACTTGGACACAAGGTAA	NA	False	NA	NA	False	NA	NA	NA	30857013	30857204	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_30857000_30857200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173857	chr9	-	3266	19	FSM	ENSMUSG00000031995.10	ENSMUST00000034478.3	3259	19	-7	0	-7	0	multi-exon	FALSE	canonical	3	531	junction_11	45.3756610671839	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTTCTTGCTATACT	NA	False	NA	0	True	AGTAAA	-24	NA	31043156	31000697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173869	chr9	-	3193	18	NIC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	25	-5	combination_of_known_splicesites	FALSE	canonical	3	10	junction_13	148.035462879326	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAATTTGTTTTTCTTGCT	NA	False	NA	-5	True	AGTAAA	-19	NA	31043124	31000702	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173871	chr9	-	3143	19	NNC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	10831	-5	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_18	138.463894210729	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAATTTGTTTTTCTTGCT	NA	False	NA	-5	True	AGTAAA	-19	NA	31032192	31000702	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31031995
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173882	chr9	-	3539	16	FSM	ENSMUSG00000031996.18	ENSMUST00000217641.2	3462	16	-74	-3	-46	3	multi-exon	FALSE	canonical	3	473	junction_10	230.67090554872	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTGTTCCTGACCATGG	8669	False	NA	-6	True	AATAAA	-22	NA	31123157	31060849	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173886	chr9	-	3721	17	FSM	ENSMUSG00000031996.18	ENSMUST00000072634.15	3634	17	-86	-1	-62	1	multi-exon	FALSE	canonical	3	712	junction_10	199.562020434751	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTTGTGTTCCTGACCAT	8653	False	NA	-8	True	AATAAA	-20	NA	31123173	31060851	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173901	chr9	-	3692	18	NIC	ENSMUSG00000031996.18	novel	3634	17	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	434.500086604727	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	8717	False	NA	-9	True	AATAAA	-19	NA	31123109	31060852	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31067485_31067522_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173902	chr9	-	3533	17	FSM	ENSMUSG00000031996.18	ENSMUST00000079758.9	3504	17	-29	0	-7	0	multi-exon	FALSE	canonical	3	24	junction_5	460.436596476648	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	8708	False	NA	-9	True	AATAAA	-19	NA	31123118	31060852	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31067485_31067522_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173917	chr9	+	199	1	Intergenic	novelGene_5295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACCCTGACTAAGACAAT	NA	False	NA	NA	False	NA	NA	NA	31090685	31090884	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_31090700_31090900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173925	chr9	+	4746	22	NNC	ENSMUSG00000042496.19	novel	6772	22	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_21	8.75776299624583	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTTTCTTTCTTGTGCA	NA	False	NA	NA	False	AATAAA	-15	NA	31191844	31293024	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_+_31191959_31224722_31224918_31227465_31227631_31229807_31229868_31236922_31237131_31238611_31238854_31240957_31241162_31246612_31246686_31248600_31248719_31251625_31251756_31252537_31252781_31258088_31258437_31260407_31260564_31264582_31264763_31265770_31265882_31268437_31268639_31270303_31270448_31271044_31271216_31272116_31272258_31273626_31273796_31282119_31282224_31291755
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173937	chr9	+	194	1	Intergenic	novelGene_5296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	308	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAAAGTGGTCCTTCTG	-4	True	NA	NA	False	NA	NA	NA	31281243	31281437	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_31281200_31281400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173942	chr9	+	195	1	Intergenic	novelGene_5297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATATGTATCACTTGTGG	NA	False	NA	NA	False	NA	NA	NA	31295548	31295743	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_31295500_31295700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173945	chr9	+	5192	26	NIC	ENSMUSG00000042185.15	novel	5398	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_5	9.17387595294377	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGGCCTTTAATCATT	NA	False	NA	6	True	ATTAAA	-14	NA	31297492	31332629	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_31297567_31300172_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308295_31308434_31309015_31309090_31309855_31309941_31310444_31310626_31311234_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31313575_31314309_31314371_31314750_31314926_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173961	chr9	-	176	1	Intergenic	novelGene_5298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTTAGTTTTTAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	31355245	31355069	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_31355100_31355200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173964	chr9	-	156	1	Intergenic	novelGene_5299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATGTCTGCTATCCTCC	NA	False	NA	0	True	NA	NA	NA	31501702	31501546	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_31501500_31501700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173969	chr9	-	179	1	Intergenic	novelGene_5300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCACCTACGTGAGATC	NA	False	NA	NA	False	NA	NA	NA	31937204	31937025	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_31937000_31937200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173980	chr9	+	195	1	Intergenic	novelGene_5301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTCTTAGTAATGAAAGC	NA	False	NA	NA	False	NA	NA	NA	32862782	32862977	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_32862800_32863000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000173990	chr9	+	2021	1	FSM	ENSMUSG00000079884.7	ENSMUST00000182663.3	604	1	-90	-1327	-90	1327	mono-exon	FALSE	NA	NA	NA	NA	NA	1071	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGACATAGGATTCAATC	NA	False	NA	NA	False	NA	NA	NA	33639452	33641473	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_33639500_33641500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174002	chr9	-	2092	11	FSM	ENSMUSG00000032038.8	ENSMUST00000034537.8	2095	11	3	0	3	0	multi-exon	FALSE	canonical	3	169	junction_1	8.15107354892593	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTGGGGCTCTGTGT	NA	False	NA	-2	True	ATTAAA	-24	NA	35028166	34957871	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_34958816_34959114_34959259_34963535_34963680_34964373_34964564_34964667_34964764_34965358_34965420_34965730_34965829_34965997_34966079_34966493_34966579_34966869_34966946_35027993
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174009	chr9	-	1258	6	FSM	ENSMUSG00000032040.16	ENSMUST00000034539.12	1274	6	20	-4	18	4	multi-exon	FALSE	canonical	3	621	junction_4	33.1083071146804	326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTAGCCCAGTAGGGTG	NA	False	NA	1	True	AATAAA	-26	NA	35087337	35035699	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_35036141_35037602_35037714_35040756_35040871_35047639_35047786_35082372_35082548_35087066
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174025	chr9	-	185	1	Intergenic	novelGene_5302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCCTTGTGTTTTATATG	7595	False	NA	NA	False	NA	NA	NA	35091518	35091333	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_35091300_35091500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174046	chr9	-	2214	11	FSM	ENSMUSG00000039048.16	ENSMUST00000127996.8	2289	11	75	0	0	0	multi-exon	TRUE	canonical	3	179	junction_9	18.9747200242849	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTCTTGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	35122276	35115503	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_35116420_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35120711_35120826_35121240_35121462_35122102
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174052	chr9	+	3044	14	FSM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	-49	-2	-49	2	multi-exon	TRUE	canonical	3	518	junction_4	138.528744373691	368	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGGTTCATATTATTTTA	5463	False	NA	5	True	AATAAA	-20	NA	35122401	35128312	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174068	chr9	-	1615	8	FSM	ENSMUSG00000050471.18	ENSMUST00000059057.14	1860	8	34	211	-4	4	multi-exon	FALSE	canonical	3	113	junction_5	33.1724006256	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGCTCTACTTTGAAGA	6398	False	NA	-16	True	ATTAAA	-25	NA	35179067	35128526	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_35129044_35129224_35129285_35132675_35132962_35134909_35135039_35138459_35138688_35146526_35146780_35155909_35156003_35179018
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174086	chr9	+	1822	7	FSM	ENSMUSG00000032044.5	ENSMUST00000034543.5	1821	7	-1	0	-1	0	multi-exon	FALSE	canonical	3	136	junction_6	10.6052921799554	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTAATTTTTTGAGAT	NA	False	NA	NA	False	NA	NA	NA	35179159	35187261	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_35179375_35179697_35179864_35181260_35181463_35183829_35183924_35183997_35184143_35184763_35184862_35186359
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174098	chr9	+	205	1	Intergenic	novelGene_5303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCCATTAACCAACCAGCG	NA	False	NA	NA	False	NA	NA	NA	35239515	35239720	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_35239500_35239700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174109	chr9	+	1755	4	FSM	ENSMUSG00000032103.11	ENSMUST00000034615.10	2019	4	6	258	0	5	multi-exon	FALSE	canonical	3	88	junction_3	6.68331255192114	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTTCTTTTTCAAGGC	NA	False	NA	17	True	ATTAAA	-17	NA	35470761	35478439	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_35470814_35476079_35476494_35476585_35477152_35477716
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174124	chr9	-	1689	4	FSM	ENSMUSG00000050555.10	ENSMUST00000115110.5	1973	4	284	0	-17	0	multi-exon	FALSE	canonical	3	233	junction_2	23.2808934536456	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTTGAACCTTGTTTTA	NA	False	NA	51	True	ATTAAA	-17	NA	35481410	35472115	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_35473401_35475358_35475474_35479750_35479802_35481172
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174129	chr9	-	176	1	Intergenic	novelGene_5304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAATTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	35528259	35528083	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_35528100_35528300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174134	chr9	+	183	1	Intergenic	novelGene_5305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGAGAAATGTTCATAAT	NA	False	NA	NA	False	NA	NA	NA	35850880	35851063	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_35850900_35851100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174140	chr9	+	188	1	Intergenic	novelGene_5306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTCAAACTTGCTTTA	NA	False	NA	NA	False	NA	NA	NA	36619195	36619383	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_36619200_36619400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174143	chr9	-	3216	13	FSM	ENSMUSG00000032113.17	ENSMUST00000034625.12	3397	13	24	157	24	-157	multi-exon	FALSE	canonical	3	297	junction_12	54.0685650098301	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAACAACTGTTTTTTG	672	False	NA	-5	True	TATAAA	-21	NA	36637930	36619934	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635317_36637092_36637175_36637858
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174166	chr9	+	203	1	Intergenic	novelGene_5307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAAGGGATGCTAGCCT	NA	False	NA	NA	False	NA	NA	NA	36680556	36680759	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_36680600_36680800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174173	chr9	-	2236	11	FSM	ENSMUSG00000062762.18	ENSMUST00000238932.2	2220	11	-10	-6	-10	6	multi-exon	TRUE	canonical	3	488	junction_2	34.4551882885582	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAATGTTTGATTTCTA	NA	False	NA	-2	True	ATTAAA	-23	NA	36708699	36690448	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708508
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174192	chr9	-	193	1	Intergenic	novelGene_5308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACACACATACACACAACCA	6723	False	NA	NA	False	NA	NA	NA	36724339	36724146	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_36724100_36724300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174200	chr9	+	1726	10	FSM	ENSMUSG00000032118.17	ENSMUST00000034630.15	1794	10	68	0	-12	0	multi-exon	FALSE	canonical	3	83	junction_5	5.61743318211757	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCATGGTTTTTGGAGA	NA	False	NA	18	True	AATAAA	-18	NA	36744047	36790220	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_36744208_36754957_36755314_36761642_36761743_36772107_36772195_36774792_36774962_36778991_36779264_36780143_36780225_36781776_36781853_36787592_36787659_36789861
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174214	chr9	+	212	1	Intergenic	novelGene_5309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAGAAAGGAGGAAGCTAA	NA	False	NA	NA	False	NA	NA	NA	36814268	36814480	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_36814300_36814500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174231	chr9	+	445	1	FSM	ENSMUSG00000090136.5	ENSMUST00000160052.2	444	1	-1	0	-1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	276	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAATGGGGCAAGCTCA	NA	False	NA	NA	False	AATAAA	-43	NA	37164216	37164661	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_37164200_37164700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174247	chr9	+	192	1	Intergenic	novelGene_5310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATTACTTAAAGAAATAAT	NA	False	NA	NA	False	NA	NA	NA	37360192	37360384	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_37360200_37360400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174254	chr9	+	191	1	Intergenic	novelGene_5311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCTCTATCAGTGTCAT	NA	False	NA	NA	False	NA	NA	NA	37396124	37396315	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_37396100_37396300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174276	chr9	+	5953	4	NIC	ENSMUSG00000042138.10	novel	2591	4	NA	NA	-21	36	intron_retention	FALSE	canonical	3	44	junction_1	87.9406365428154	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTGCTAGTTGAGCCT	374	False	NA	NA	False	TTTAAA	-43	NA	37400593	37435482	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_37401130_37424909_37428769_37430022_37430084_37433985
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174283	chr9	+	2282	5	NIC	ENSMUSG00000042138.10	novel	423	4	NA	NA	-19	36	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	97.7010747126151	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTGCTAGTTGAGCCT	376	False	NA	NA	False	TTTAAA	-43	NA	37400595	37435482	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_37401130_37424909_37425000_37428668_37428769_37430022_37430084_37433985
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174324	chr9	+	191	1	Intergenic	novelGene_5312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCTCATAGTGTGTTGTA	NA	False	NA	NA	False	NA	NA	NA	39261757	39261948	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_39261800_39261900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174334	chr9	+	194	1	Intergenic	novelGene_5313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATGTTTGCTGGTCCTT	NA	False	NA	NA	False	NA	NA	NA	39796296	39796490	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_39796300_39796500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174340	chr9	+	215	1	Intergenic	novelGene_5314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGCAGCCTTATTTATAA	2529	False	NA	NA	False	NA	NA	NA	40150689	40150904	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_40150700_40150900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174346	chr9	+	178	1	Intergenic	novelGene_5315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGAGAGAGAGAGAGAGC	NA	False	NA	NA	False	NA	NA	NA	40678963	40679141	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_40679000_40679100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174370	chr9	+	2187	8	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	-3	0	intron_retention	FALSE	canonical	3	3928	junction_3	5605.38982605499	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2456	False	NA	10	True	AATAAA	-20	NA	40712568	40716496	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174372	chr9	+	2204	8	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	-3	0	intron_retention	FALSE	canonical	3	3928	junction_3	6242.18814002832	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2456	False	NA	10	True	AATAAA	-20	NA	40712568	40716496	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715992_40716227
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174393	chr9	+	2199	8	ISM	ENSMUSG00000015656.18	ENSMUST00000015800.16	2394	9	764	0	287	0	3prime_fragment	FALSE	canonical	3	3928	junction_2	6440.2006179932	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2931	False	NA	10	True	AATAAA	-20	NA	40713043	40716496	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr9_+_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174405	chr9	-	7218	48	FSM	ENSMUSG00000049313.9	ENSMUST00000060989.9	10715	48	-26	3523	-26	1496	multi-exon	TRUE	canonical	3	333	junction_27	73.2507244219374	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACGGAGTGCATTCTCCT	NA	False	NA	-35	True	AATAAA	-19	NA	42035619	41879538	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174408	chr9	-	4847	6	FSM	ENSMUSG00000032018.15	ENSMUST00000052725.15	4787	6	-57	-3	-57	3	multi-exon	FALSE	canonical	3	174	junction_5	23.9198662203617	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGTGTGGACCTGTGTT	NA	False	NA	2	True	NA	NA	NA	42175609	42162887	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42173346_42173428_42175501
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174435	chr9	+	253	1	Intergenic	novelGene_5316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTTTTTGCACTGATAC	NA	False	NA	NA	False	NA	NA	NA	42997464	42997717	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_42997500_42997700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174443	chr9	+	220	1	Intergenic	novelGene_5317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATATATATATATAAAAT	NA	False	NA	NA	False	TTTAAA	-8	NA	43008109	43008329	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_43008100_43008300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174444	chr9	-	3485	3	FSM	ENSMUSG00000048503.8	ENSMUST00000061833.6	3503	3	18	0	-8	0	multi-exon	FALSE	canonical	3	19	junction_1	3	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCCTTCGTATCTTTGT	NA	False	NA	NA	False	AATAAA	-22	NA	43027847	43019944	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_43023154_43024755_43024956_43027771
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174472	chr9	+	186	1	Intergenic	novelGene_5318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAATACCAGCGCAGGG	NA	False	NA	NA	False	NA	NA	NA	43279527	43279713	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_43279500_43279700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174480	chr9	-	175	1	Intergenic	novelGene_5319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCCCATTTTTTATTA	NA	False	NA	NA	False	NA	NA	NA	43724414	43724239	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_43724200_43724400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174486	chr9	+	3813	13	FSM	ENSMUSG00000032010.16	ENSMUST00000034508.14	3867	13	54	0	-3	0	multi-exon	FALSE	canonical	3	29	junction_2	11.1654228162962	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTGACGGTCTTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	43978371	44006924	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_43978518_43986662_43987520_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174500	chr9	-	2742	1	FSM	ENSMUSG00000053128.16	ENSMUST00000056328.6	2724	1	-18	0	-5	0	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTCCTTGGGAGTGGT	9244	False	NA	NA	False	AATAAA	-20	NA	44024819	44022077	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_44022100_44024800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174504	chr9	+	211	1	ISM	ENSMUSG00000097467.3	ENSMUST00000181106.3	2151	2	8824	3	3625	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACAACTTTTTTTTCTTT	797	False	NA	NA	False	NA	NA	NA	44033043	44033254	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr9_+_44033000_44033300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174515	chr9	+	190	1	Intergenic	novelGene_5320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTATTATTCCCTCCCA	NA	False	NA	NA	False	NA	NA	NA	44196732	44196922	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_44196700_44196900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174532	chr9	-	3363	14	FSM	ENSMUSG00000032120.12	ENSMUST00000065080.10	4337	14	0	974	0	0	multi-exon	FALSE	canonical	3	36	junction_2	6.29548537403388	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGAGTGGCTGGTTATCCT	5315	False	NA	NA	False	TATAAA	-1	NA	44231582	44221507	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_44222565_44224802_44225089_44225174_44225309_44225451_44225554_44226176_44226352_44226443_44226572_44226660_44226726_44227402_44227512_44227602_44227715_44227807_44227925_44228004_44228116_44228296_44228417_44228879_44228976_44230831
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174557	chr9	+	1388	1	FSM	ENSMUSG00000049932.4	ENSMUST00000052686.4	1384	1	-3	-1	-3	1	mono-exon	FALSE	NA	NA	NA	NA	NA	994	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTAATGTTGAATGCTG	5250	False	NA	35	True	ATTAAA	-31	NA	44245987	44247375	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_44246000_44247400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174564	chr9	-	1582	14	FSM	ENSMUSG00000032126.17	ENSMUST00000077353.15	1605	14	14	9	14	4	multi-exon	FALSE	canonical	3	699	junction_4	86.0870620274656	268	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTCTGAGACCTTTCTG	1422	False	NA	0	True	AATAAA	-24	NA	44255511	44247644	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_44248143_44248222_44248310_44248414_44248469_44248652_44248773_44248948_44248988_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511_44252562_44252922_44252996_44253314_44253369_44255306
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174576	chr9	+	183	1	Intergenic	novelGene_5321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAGTGAGCCAAAA	NA	False	NA	NA	False	NA	NA	NA	44284499	44284682	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_44284500_44284700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174579	chr9	+	182	1	Intergenic	novelGene_5322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	435	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACAGGAGAGGGGGGAAA	NA	False	NA	NA	False	NA	NA	NA	44288885	44289067	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_44288900_44289100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174587	chr9	-	179	1	FSM	ENSMUSG00000111088.2	ENSMUST00000217460.2	818	1	636	3	636	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATGAGTATTCAT	NA	False	NA	NA	False	NA	NA	NA	44290111	44289932	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_44289900_44290100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174593	chr9	+	4413	26	FSM	ENSMUSG00000032115.15	ENSMUST00000066601.13	4432	26	15	4	15	2	multi-exon	TRUE	canonical	3	476	junction_1	89.8853847964173	297	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTGTTTGCTTCTTCC	NA	False	NA	3	True	AATAAA	-19	NA	44290801	44303662	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174654	chr9	-	846	4	FSM	ENSMUSG00000032112.11	ENSMUST00000213747.2	935	4	32	57	32	4	multi-exon	FALSE	canonical	3	851	junction_3	13.0213499897497	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTCCTAACTGATCATT	1999	False	NA	-4	True	AATAAA	-21	NA	44318371	44315051	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_44315396_44315630_44315758_44316539_44316644_44318100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174668	chr9	+	553	5	FSM	ENSMUSG00000009927.10	ENSMUST00000080300.9	1280	5	496	231	-25	2	multi-exon	FALSE	canonical	3	5317	junction_4	3059.10970504492	1066	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGCATCTGTTTCCTAA	NA	False	NA	96	True	AATAAA	-21	NA	44318931	44321493	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_44319055_44319284_44319381_44319982_44320167_44321250_44321350_44321442
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174683	chr9	+	137	1	Intergenic	novelGene_5323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAACAAAACTATATTTTA	NA	False	NA	NA	False	NA	NA	NA	44363400	44363537	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_44363400_44363500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174696	chr9	+	1382	1	FSM	ENSMUSG00000094437.3	ENSMUST00000178509.3	357	1	-82	-943	-82	943	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACAAAGAAGAGAGATAAGA	NA	False	NA	NA	False	AATAAA	-39	NA	44375457	44376839	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_44375500_44376800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174704	chr9	+	210	1	Intergenic	novelGene_5324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGCAGGCCATGGTGG	NA	False	NA	NA	False	AAAAAG	-7	NA	44472558	44472768	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_44472600_44472800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174709	chr9	+	185	1	Intergenic	novelGene_5325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACAAACCACAGCTTTGT	2545	False	NA	14	True	NA	NA	NA	44485748	44485933	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_44485700_44485900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174713	chr9	+	177	1	Intergenic	novelGene_5326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTATTATATATATAATAA	NA	False	NA	NA	False	NA	NA	NA	44513776	44513953	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_44513800_44514000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174724	chr9	+	193	1	Intergenic	novelGene_5327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCTTGGTTACGGTGT	8379	False	NA	NA	False	NA	NA	NA	44649732	44649925	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_44649700_44649900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174732	chr9	-	4071	10	FSM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	-3	4	-3	-4	multi-exon	FALSE	canonical	3	910	junction_6	81.8426674920987	1024	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTGCTTATCCCTCAA	NA	False	NA	NA	False	NA	NA	NA	44679145	44652864	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44678966
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174737	chr9	+	178	1	Antisense	novelGene_ENSMUSG00000032096.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGGACCCTTTCACCAC	NA	False	NA	NA	False	NA	NA	NA	44660727	44660905	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr9_+_44660700_44660900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174742	chr9	+	1589	12	FSM	ENSMUSG00000002031.14	ENSMUST00000238800.2	1059	12	-214	-316	-21	1	multi-exon	FALSE	canonical	3	173	junction_2	11.1058022211458	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGCTCATTAGTGTCC	NA	False	NA	11	True	AATACA	-20	NA	44684235	44702193	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_44684471_44684984_44685082_44689858_44689936_44693396_44693531_44695027_44695103_44695256_44695351_44695628_44695758_44697590_44697713_44698134_44698202_44700863_44700925_44701187_44701274_44701781
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174751	chr9	-	179	1	Intergenic	novelGene_5328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGAAGGAAGGAAGGAAGG	2079	False	NA	NA	False	NA	NA	NA	44765765	44765586	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_44765600_44765800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174761	chr9	-	490	3	FSM	ENSMUSG00000038717.10	ENSMUST00000043675.9	544	3	23	31	-12	22	multi-exon	FALSE	canonical	3	4613	junction_2	56	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGCAGTCATAGTATTT	NA	False	NA	-7	True	AATAAA	-41	NA	44832017	44824545	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_44824765_44825948_44826110_44831907
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174770	chr9	-	3857	21	NIC	ENSMUSG00000059890.17	novel	3415	20	NA	NA	1	398	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	10.7396461766671	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGCCATTTTTTTCTT	5352	False	NA	NA	False	NA	NA	NA	44876846	44836747	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44874634_44874731_44876782
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174781	chr9	+	3018	6	FSM	ENSMUSG00000032092.6	ENSMUST00000034600.5	3107	6	116	-27	116	27	multi-exon	FALSE	canonical	3	426	junction_5	54.042205728486	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAATCTGCAAAATTCACAA	NA	False	NA	42	True	AATAAA	-45	NA	44953838	44965340	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_44954093_44954997_44955165_44955450_44955662_44958461_44958610_44960949_44961023_44963175
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174805	chr9	+	1772	8	FSM	ENSMUSG00000066705.8	ENSMUST00000217381.2	1789	8	17	0	17	0	multi-exon	FALSE	canonical	3	728	junction_2	116.890320124361	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGAGTGGCTTTTCTTCT	385	False	NA	22	True	AATAAA	-26	NA	45281499	45307457	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_45281787_45301285_45301346_45301934_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174812	chr9	+	1566	8	FSM	ENSMUSG00000066705.8	ENSMUST00000085939.8	1788	8	226	-4	-31	0	multi-exon	FALSE	canonical	3	400	junction_2	224.259325108142	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGAGTGGCTTTTCTTCT	594	False	NA	22	True	AATAAA	-26	NA	45281708	45307457	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_45281787_45301285_45301346_45301931_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174838	chr9	+	3897	9	FSM	ENSMUSG00000032086.13	ENSMUST00000034591.11	6058	9	0	2161	0	19	multi-exon	FALSE	canonical	3	11	junction_1	5.43139024560011	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAGAGAGAGAGAGAACTC	7298	False	NA	NA	False	NA	NA	NA	45749877	45773536	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_45750587_45764185_45764275_45765924_45766142_45767385_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174871	chr9	-	4233	6	FSM	ENSMUSG00000003131.8	ENSMUST00000172450.3	6873	6	184	2456	-32	-2456	multi-exon	FALSE	canonical	3	321	junction_5	34.2169548615887	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTGATGTCTGTTTCTT	4096	False	NA	-3	True	TATAAA	-21	NA	45896165	45876612	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896002
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174875	chr9	-	3160	6	FSM	ENSMUSG00000003131.8	ENSMUST00000214179.2	794	6	-4	-2362	-4	2362	multi-exon	FALSE	canonical	3	18	junction_5	143.058869001541	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGGAGTCCACTGTCAT	9707	False	NA	-1	True	AATAAA	-25	NA	45896696	45877619	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896599
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174880	chr9	-	185	1	Intergenic	novelGene_5329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAGGGATTGAGCTCATG	3795	False	NA	-8	True	NA	NA	NA	45903792	45903607	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_45903600_45903800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174907	chr9	+	185	1	Intergenic	novelGene_5330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCTTATACTCAAAAGGCC	NA	False	NA	NA	False	NA	NA	NA	46166963	46167148	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_46167000_46167100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174915	chr9	+	2897	14	FSM	ENSMUSG00000032078.18	ENSMUST00000156440.8	2984	14	87	0	-42	0	multi-exon	FALSE	canonical	3	619	junction_8	51.2505159448701	481	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGGTACAGCGTCCATT	NA	False	NA	NA	False	AATAAA	-18	NA	46184448	46193941	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174933	chr9	-	176	1	Intergenic	novelGene_5331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAATACAACAAATGT	NA	False	NA	NA	False	NA	NA	NA	46278516	46278340	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_46278300_46278500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174937	chr9	+	178	1	Intergenic	novelGene_5332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTGG	NA	False	NA	NA	False	NA	NA	NA	47435937	47436115	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_47435900_47436100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174941	chr9	+	4235	10	ISM	ENSMUSG00000032076.21	ENSMUST00000085909.9	2126	11	257712	-2356	257596	0	3prime_fragment	FALSE	canonical	3	105	junction_8	78.429019572548	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTAAATCTCTTTCTGG	1846	False	NA	17	True	AATAAA	-21	NA	47699266	47764683	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr9_+_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47740674_47740708_47759464_47759597_47761569
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174942	chr9	+	4202	9	ISM	ENSMUSG00000032076.21	ENSMUST00000114547.8	4444	10	257712	-5	257596	0	3prime_fragment	FALSE	canonical	3	143	junction_7	61.313614923604	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTAAATCTCTTTCTGG	1846	False	NA	17	True	AATAAA	-21	NA	47699266	47764683	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr9_+_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47759464_47759597_47761569
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174943	chr9	+	2230	6	ISM	ENSMUSG00000032076.21	ENSMUST00000151624.2	1112	7	257596	-1249	257596	1249	3prime_fragment	FALSE	canonical	3	300	junction_1	18.4780951399218	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGGCAAACGTCTAGT	1846	False	NA	NA	False	ATTAAA	-18	NA	47699266	47726601	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr9_+_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174947	chr9	+	1311	8	ISM	ENSMUSG00000032076.21	ENSMUST00000152459.8	1784	12	257758	20856	257596	-4717	internal_fragment	FALSE	canonical	3	173	junction_7	55.5356109323797	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAAGTGTATTTGTCTAC	1846	False	NA	NA	False	AATAAA	-30	NA	47699266	47741029	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr9_+_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47740674
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174970	chr9	+	207	1	Intergenic	novelGene_5333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAGCACAGCTTCTACT	NA	False	NA	NA	False	NA	NA	NA	48220469	48220676	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_48220500_48220700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174973	chr9	+	188	1	Intergenic	novelGene_5334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTCAGGTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48373512	48373700	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_48373500_48373700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174981	chr9	-	1099	7	FSM	ENSMUSG00000032026.8	ENSMUST00000034524.5	1077	7	-22	0	-10	0	multi-exon	FALSE	canonical	3	1058	junction_4	53.1959167188193	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCGGCACCCTCTGCTC	NA	False	NA	-1	True	AATAAA	-26	NA	48391933	48379811	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_48380247_48383119_48383174_48384331_48384441_48385701_48385814_48386419_48386498_48390609_48390694_48391706
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174988	chr9	-	1839	5	FSM	ENSMUSG00000042396.11	ENSMUST00000170000.4	1773	5	-62	-4	-60	4	multi-exon	FALSE	canonical	3	400	junction_3	15.188400179084	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTCTTTATTTTGACG	NA	False	NA	0	True	ATTAAA	-16	NA	48406659	48399996	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_48401289_48402147_48402239_48404706_48404795_48405318_48405482_48406454
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000174997	chr9	-	1895	6	FSM	ENSMUSG00000042396.11	ENSMUST00000214923.2	1867	6	-16	-12	-11	4	multi-exon	FALSE	canonical	0	0	junction_4	182.483314305719	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTCTTTATTTTGACG	NA	False	NA	0	True	ATTAAA	-16	NA	48406610	48399996	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_48401289_48402147_48402239_48404706_48404795_48405318_48405482_48405582_48405688_48406454
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175013	chr9	+	534	1	FSM	ENSMUSG00000042293.9	ENSMUST00000048824.9	531	1	-3	0	-3	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGGTGTGACGGCAGT	2780	False	NA	14	True	NA	NA	NA	48406738	48407272	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_48406700_48407300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175035	chr9	+	4217	24	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_8	163.90230618736	24	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTAGCATGACCCTTTTT	NA	False	NA	15	True	AATAAA	-21	NA	48896679	48953812	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922565_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175059	chr9	+	191	1	Intergenic	novelGene_5335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTGCTTTCTGACAAGC	NA	False	NA	NA	False	NA	NA	NA	48942615	48942806	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_48942600_48942800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175062	chr9	+	192	1	Intergenic	novelGene_5336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGAGAAAAGTCCTTC	NA	False	NA	NA	False	NA	NA	NA	48955097	48955289	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_48955100_48955300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175075	chr9	+	2885	16	FSM	ENSMUSG00000032264.10	ENSMUST00000034803.10	2863	16	-21	-1	-21	1	multi-exon	FALSE	canonical	3	236	junction_12	29.9965923990635	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGAGTGTCTTTAATAAC	NA	False	NA	21	True	AGTAAA	-17	NA	48966891	48990073	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354_48972515_48973492_48973646_48975309_48975502_48977978_48978143_48979959_48980143_48980873_48981113_48982881_48982954_48984502_48984673_48985318_48985450_48986204_48986337_48988751_48988955_48989498
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175079	chr9	-	182	1	Intergenic	novelGene_5337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTTAAAAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	49002616	49002434	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_49002400_49002600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175081	chr9	-	2279	22	FSM	ENSMUSG00000040219.5	ENSMUST00000055096.5	3628	22	48	1301	38	-1301	multi-exon	FALSE	canonical	3	14	junction_3	5.49706167646225	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATGTCTGCCGGGTTTT	NA	False	NA	0	True	AATAAA	-27	NA	49397477	49349563	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_49349757_49351456_49351683_49353136_49353237_49354401_49354504_49355967_49356037_49356484_49356584_49357041_49357180_49357824_49357886_49359226_49359320_49364623_49364793_49367160_49367250_49368132_49368203_49369295_49369485_49369949_49370011_49371689_49371762_49378071_49378132_49381528_49381651_49382425_49382504_49383161_49383184_49383682_49383844_49395969_49396043_49397445
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175085	chr9	-	5807	17	ISM	ENSMUSG00000039542.17	ENSMUST00000193547.6	6050	18	229022	-2	-1354	2	3prime_fragment	FALSE	canonical	1	2	junction_5	44.1668976015975	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGTCCAACTGGGCTTT	9144	False	NA	1	True	AATAAA	-24	NA	49481203	49413433	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr9_-_49416864_49419888_49420006_49421004_49421213_49431334_49431513_49434821_49434947_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175090	chr9	-	5806	17	ISM	ENSMUSG00000039542.17	ENSMUST00000166811.9	3088	18	228969	-2910	-1354	-2	3prime_fragment	FALSE	canonical	1	2	junction_5	49.2306037313174	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTCTAGTCCAACTGGG	9144	False	NA	-3	True	AATAAA	-20	NA	49481203	49413437	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr9_-_49416864_49419888_49420006_49421004_49421213_49431334_49431516_49434821_49434947_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175101	chr9	-	4761	13	NIC	ENSMUSG00000039542.17	novel	2525	14	NA	NA	-1354	2311	combination_of_known_splicesites	FALSE	canonical	2	37	junction_1	38.7544800277622	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTTGGTGCTTTCATGCC	9144	False	NA	NA	False	AATAAA	-23	NA	49481203	49440264	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_49443277_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175108	chr9	-	1986	13	NNC	ENSMUSG00000039542.17	novel	6050	18	NA	NA	-1354	-886	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	44.198651940227	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTCTGTGATTTTGTTG	9144	False	NA	NA	False	NA	NA	NA	49481203	49443461	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_-_49443699_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175115	chr9	+	1340	4	FSM	ENSMUSG00000032068.15	ENSMUST00000114474.8	1689	4	5	344	3	-344	multi-exon	FALSE	canonical	3	38	junction_1	3.39934634239519	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCGAAATGTGCTAAATTG	NA	False	NA	NA	False	AATAAA	-19	NA	50405829	50416438	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_50406047_50410394_50410600_50412372_50412429_50415576
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175126	chr9	-	190	1	FSM	ENSMUSG00000032067.7	ENSMUST00000217146.2	4211	1	3950	71	3950	-70	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTCATTTGAGCAAAAT	NA	False	NA	NA	False	NA	NA	NA	50433177	50432987	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_50433000_50433200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175128	chr9	+	205	1	Intergenic	novelGene_5338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTAGGAGATGGGACC	NA	False	NA	NA	False	NA	NA	NA	50443579	50443784	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_50443600_50443800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175158	chr9	+	524	2	FSM	ENSMUSG00000039016.6	ENSMUST00000044051.6	518	2	-6	0	-6	0	multi-exon	FALSE	canonical	3	1341	junction_1	0	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTTCTTCTAAATCCC	8807	False	NA	21	True	AATAAA	-15	NA	50515203	50516620	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_50515340_50516232
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175186	chr9	+	204	1	Intergenic	novelGene_5339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	269	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATAATGTTTTCTTTTTGG	NA	False	NA	NA	False	NA	NA	NA	50540681	50540885	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_50540700_50540900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175202	chr9	-	219	1	Intergenic	novelGene_5340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAAACACTAGTGAGGGT	NA	False	NA	NA	False	NA	NA	NA	50562527	50562308	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_50562300_50562500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175232	chr9	+	2516	14	FSM	ENSMUSG00000032059.14	ENSMUST00000162073.8	2530	14	0	14	0	0	multi-exon	FALSE	canonical	3	64	junction_3	42.7472273227982	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTTAAGATTTTTTTAA	NA	False	NA	24	True	TTTAAA	-31	NA	50686604	50754828	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_50686819_50687843_50687980_50690269_50690405_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175261	chr9	-	176	1	Intergenic	novelGene_5341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAAAGGATTTGT	NA	False	NA	NA	False	NA	NA	NA	50839866	50839690	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_50839700_50839900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175265	chr9	+	188	1	Intergenic	novelGene_5342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATCGAAAGGACCCAGA	9968	False	NA	NA	False	NA	NA	NA	51666830	51667018	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_51666800_51667000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175339	chr9	-	1530	12	FSM	ENSMUSG00000032047.6	ENSMUST00000034547.6	3405	12	28	1847	-24	118	multi-exon	FALSE	canonical	3	149	junction_5	11.4912830779187	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTTTTTGTAAACTT	NA	False	NA	-20	True	AATAAA	-19	NA	53521654	53493668	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_53493966_53494736_53494895_53496139_53496205_53498752_53498867_53500477_53500574_53502606_53502758_53503267_53503412_53505705_53505807_53505993_53506090_53506582_53506701_53509384_53509433_53521512
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175350	chr9	-	185	1	Intergenic	novelGene_5343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAACAATATATATATTGG	NA	False	NA	NA	False	NA	NA	NA	53512563	53512378	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_53512400_53512600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175387	chr9	+	192	1	Intergenic	novelGene_5344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGACAGTCAGAAGTAAAAG	NA	False	NA	NA	False	NA	NA	NA	54373446	54373638	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_54373400_54373600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175403	chr9	+	2465	11	FSM	ENSMUSG00000032279.12	ENSMUST00000167866.2	2403	11	-60	-2	-30	2	multi-exon	FALSE	canonical	3	1656	junction_1	98.4146330583008	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCGTTTGCATTCTCTG	NA	False	NA	37	True	AATAAA	-17	NA	54493734	54511947	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_54493828_54497141_54497205_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175416	chr9	+	4185	10	NIC	ENSMUSG00000032279.12	novel	2403	11	NA	NA	6	1	intron_retention	FALSE	canonical	3	1656	junction_1	101.379497281925	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAATGATGTAATTTTG	NA	False	NA	56	True	AATAAA	-23	NA	54493770	54511230	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_54493828_54497141_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175418	chr9	+	1688	11	NNC	ENSMUSG00000032279.12	novel	2580	11	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	555.128237437081	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAATGATGTAATTTTG	NA	False	NA	56	True	AATAAA	-23	NA	54493770	54511230	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_+_54493828_54497141_54497181_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175435	chr9	-	1191	11	FSM	ENSMUSG00000061559.16	ENSMUST00000051822.13	1187	11	-2	-2	0	2	multi-exon	FALSE	canonical	3	455	junction_10	209.060852385137	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTGTGAACGTGCTGT	5421	False	NA	-1	True	AATAAA	-21	NA	54641803	54624440	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641758
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175442	chr9	-	1280	11	FSM	ENSMUSG00000061559.16	ENSMUST00000121204.8	1290	11	17	-7	0	2	multi-exon	FALSE	canonical	3	544	junction_10	185.351584832717	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTGTGAACGTGCTGT	5438	False	NA	-1	True	AATAAA	-21	NA	54641786	54624440	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641652
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175461	chr9	-	223	1	Intergenic	novelGene_5345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTCTTTGTGCCAGACA	2320	False	NA	NA	False	AAAAAG	-21	NA	54644904	54644681	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_54644700_54644900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175465	chr9	+	195	1	Intergenic	novelGene_5346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTGGAAGGAGAGGACTGG	NA	False	NA	NA	False	NA	NA	NA	54654599	54654794	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_54654600_54654800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175479	chr9	-	179	1	Intergenic	novelGene_5347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTCCATTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	54750485	54750306	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_54750300_54750500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175485	chr9	+	5873	22	FSM	ENSMUSG00000032293.9	ENSMUST00000034843.9	5770	22	-103	0	-103	0	multi-exon	TRUE	canonical	3	193	junction_6	38.4690587449917	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACTCGTTGTGTTTTAT	2523	False	NA	14	True	AATAAA	-19	NA	54770969	54819814	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54789741_54791180_54791400_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175504	chr9	+	1188	9	FSM	ENSMUSG00000032301.14	ENSMUST00000034848.14	1165	9	-8	-15	-8	15	multi-exon	FALSE	canonical	3	1650	junction_8	116.746252616519	287	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTCTCTGTGGCAACAA	NA	False	NA	17	True	AATAAA	-30	NA	54858065	54865329	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_54858188_54859365_54859393_54859624_54859668_54859962_54860126_54861946_54862025_54862164_54862254_54863540_54863672_54864094_54864219_54864918
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175515	chr9	+	184	1	Intergenic	novelGene_5348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCAGCATAAAGAAGCCA	NA	False	NA	NA	False	NA	NA	NA	54935040	54935224	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_54935000_54935200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175522	chr9	+	211	1	Intergenic	novelGene_5349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	406	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACCCTCTGACCTCATCA	NA	False	NA	NA	False	NA	NA	NA	55023984	55024195	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_55024000_55024200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175531	chr9	+	193	1	Intergenic	novelGene_5350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAAGTGTCTTAGGTTTT	NA	False	NA	NA	False	NA	NA	NA	55024346	55024539	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_55024300_55024500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175539	chr9	+	228	1	Intergenic	novelGene_5351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAAGCCGGGTGTGGTGGC	NA	False	NA	NA	False	NA	NA	NA	55049417	55049645	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_55049400_55049600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175553	chr9	+	2827	12	FSM	ENSMUSG00000032307.17	ENSMUST00000121677.8	1680	12	-17	-1130	-17	0	multi-exon	TRUE	canonical	3	92	junction_2	214.811583786642	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCACCTTTCCCTCTT	NA	False	NA	10	True	AATAAA	-18	NA	55056661	55114813	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_55057111_55070251_55070354_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175567	chr9	+	2095	7	FSM	ENSMUSG00000032309.16	ENSMUST00000034859.15	2112	7	17	0	17	0	multi-exon	FALSE	canonical	0	0	junction_2	369.828526331987	302	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTTGTAATTATTGCT	NA	False	NA	11	True	AATAAA	-18	NA	55116225	55131717	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_55116473_55116636_55116776_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175576	chr9	+	193	1	Intergenic	novelGene_5352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAAAAAGTAAGAGTTG	NA	False	NA	NA	False	NA	NA	NA	55135821	55136014	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_55135800_55136000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175584	chr9	-	257	1	Intergenic	novelGene_5353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGGTAAGGGACCGGTT	9968	False	NA	NA	False	NA	NA	NA	55140024	55139767	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_55139800_55140000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175587	chr9	+	202	1	Intergenic	novelGene_5354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTTAATAAAAACAGATGG	9559	False	NA	NA	False	NA	NA	NA	55159625	55159827	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_55159600_55159800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175609	chr9	-	4870	33	FSM	ENSMUSG00000034007.11	ENSMUST00000214747.2	5231	33	-9	370	0	-366	multi-exon	FALSE	canonical	3	40	junction_24	10.0574521500229	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGTATCAAGTATTTTCT	NA	False	NA	-5	True	AATAAA	-15	NA	55845394	55457532	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55714889_55715043_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771687_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807_55826872_55828549_55828623_55845353
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175618	chr9	+	190	1	Intergenic	novelGene_5355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATGACACACTCCCAGAG	3047	False	NA	NA	False	NA	NA	NA	55941327	55941517	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_55941300_55941500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175623	chr9	+	2038	7	FSM	ENSMUSG00000032320.8	ENSMUST00000114276.3	2024	7	-12	-2	0	2	multi-exon	FALSE	canonical	3	320	junction_5	26.0666879795309	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGCACCTGAGACATTTTC	948	False	NA	20	True	ATTAAA	-21	NA	55949128	55966363	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_55949489_55949858_55949965_55952415_55952613_55960190_55960305_55963442_55963540_55964710_55964854_55965342
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175634	chr9	-	1734	7	FSM	ENSMUSG00000032324.12	ENSMUST00000034876.10	1716	7	-15	-3	-15	3	multi-exon	FALSE	canonical	3	718	junction_1	24.1522945769824	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACATTTTAATTATTTGG	NA	False	NA	0	True	AATAAA	-20	NA	56068356	56043164	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_56044020_56052772_56052857_56053058_56053212_56053797_56053900_56054369_56054445_56054670_56054863_56068083
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175645	chr9	+	3572	10	FSM	ENSMUSG00000032329.5	ENSMUST00000034879.5	3778	10	206	0	0	0	multi-exon	FALSE	canonical	3	83	junction_9	43.8482230730809	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTGACCAGTTTTGCT	NA	False	NA	11	True	ATTAAA	-17	NA	56326098	56404220	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105_56397249_56401816
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175655	chr9	+	1030	1	FSM	ENSMUSG00000118653.2	ENSMUST00000239472.2	988	1	-30	-12	-30	12	mono-exon	FALSE	NA	NA	NA	NA	NA	745	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATATGGTAAACAAGAAAAT	NA	False	NA	NA	False	AATAAA	-45	NA	56344710	56345740	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_56344700_56345700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175661	chr9	-	182	1	Intergenic	novelGene_5356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTAGTAGGGTTTAAGAG	NA	False	NA	NA	False	NA	NA	NA	56347995	56347813	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_56347800_56348000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175667	chr9	+	208	1	Intergenic	novelGene_5357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	266	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCACCGCAGAGGGTAGC	NA	False	NA	NA	False	NA	NA	NA	56358583	56358791	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_56358600_56358800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175677	chr9	+	202	1	Intergenic	novelGene_5358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTGGCCCTTTAAGTGT	NA	False	NA	NA	False	NA	NA	NA	56810275	56810477	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_56810300_56810500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175683	chr9	+	961	1	FSM	ENSMUSG00000032288.10	ENSMUST00000034827.10	924	1	-37	0	-37	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTTGTCTGGTCGTTCT	NA	False	NA	18	True	AATAAA	-27	NA	56844721	56845682	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_56844700_56845700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175692	chr9	+	1362	9	FSM	ENSMUSG00000055334.5	ENSMUST00000068856.5	1391	9	29	0	29	0	multi-exon	TRUE	canonical	3	166	junction_1	20.9105236663265	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCTTGTGGTTATTCGG	NA	False	NA	8	True	AATATA	-19	NA	56858190	56890490	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_56858238_56864297_56864461_56870279_56870428_56877537_56877643_56877873_56877971_56882496_56882595_56885302_56885381_56888128_56888210_56889945
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175706	chr9	+	203	1	Intergenic	novelGene_5359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCCCTTCTCATAAGGG	NA	False	NA	NA	False	NA	NA	NA	56935370	56935573	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_56935400_56935600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175710	chr9	+	175	1	Intergenic	novelGene_5360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTGAATTTTTGTAGG	1923	False	NA	NA	False	NA	NA	NA	56939749	56939924	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_56939700_56939900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175733	chr9	-	208	1	Intergenic	novelGene_5361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATTCACTAGTAAGGC	NA	False	NA	NA	False	NA	NA	NA	56982236	56982028	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_56982000_56982200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175743	chr9	+	5121	21	NIC	ENSMUSG00000042557.15	novel	5206	22	NA	NA	-22	1	combination_of_known_junctions	FALSE	canonical	3	134	junction_1	51.8689454298041	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATAAGTCCCTTGTCCT	NA	False	NA	NA	False	AATAAA	-23	NA	56983637	57035649	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_56983915_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175755	chr9	-	187	1	Intergenic	novelGene_5362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCCTGTAATCCAAGGCA	NA	False	NA	NA	False	NA	NA	NA	57006017	57005830	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_57005800_57006000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175765	chr9	+	3253	26	FSM	ENSMUSG00000032295.16	ENSMUST00000160147.8	3820	26	58	509	-20	0	multi-exon	FALSE	canonical	2	160	junction_17	33.744593641056	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTTGCTGTTTCTCA	NA	False	NA	23	True	AATAAA	-24	NA	57038031	57049497	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175786	chr9	-	862	8	FSM	ENSMUSG00000032299.11	ENSMUST00000065358.9	858	8	0	-4	0	0	multi-exon	FALSE	canonical	3	701	junction_7	157.218553197095	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGGTCTTGCTTGCTTTT	6277	False	NA	0	True	AATAAA	-19	NA	57065615	57062318	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064058_57064125_57064350_57064423_57065555
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175803	chr9	-	1047	7	NIC	ENSMUSG00000032299.11	novel	858	8	NA	NA	-17	0	intron_retention	FALSE	canonical	3	701	junction_6	167.641151140033	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTATGGGTCTTGCTTGC	6314	False	NA	-4	True	AATAAA	-15	NA	57065578	57062322	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064058_57064423_57065555
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175814	chr9	-	4155	3	FSM	ENSMUSG00000032300.8	ENSMUST00000034846.7	4152	3	-3	0	-3	0	multi-exon	FALSE	canonical	3	41	junction_1	39.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGATCTAGCTTTGTAC	NA	False	NA	-7	True	ATTAAA	-21	NA	57169898	57160399	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_57161613_57163668_57166424_57169711
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175819	chr9	+	174	1	Intergenic	novelGene_5363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTTTTAAAAAAGATTCA	NA	False	NA	NA	False	NA	NA	NA	57191654	57191828	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_57191700_57191800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175826	chr9	-	1657	7	FSM	ENSMUSG00000063849.7	ENSMUST00000216365.2	1665	7	11	-3	0	3	multi-exon	FALSE	canonical	3	110	junction_2	15.2059929706094	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTGTCCTTCTTTACAT	NA	False	NA	-1	True	AATAAA	-20	NA	57347379	57321240	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_57322010_57322368_57322756_57327445_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57347352
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175830	chr9	-	1436	7	FSM	ENSMUSG00000063849.7	ENSMUST00000085709.6	2744	7	0	1308	0	0	multi-exon	FALSE	canonical	3	27	junction_2	42.49607825043	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACTGTGTCCTTCTTTA	NA	False	NA	-4	True	AATAAA	-17	NA	57347379	57321243	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_57322010_57322368_57322538_57327445_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57347352
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175868	chr9	+	707	1	FSM	ENSMUSG00000074280.7	ENSMUST00000098689.7	409	1	-50	-248	-50	248	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTTCCAGCAATGTTCA	NA	False	NA	NA	False	NA	NA	NA	57391195	57391902	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_57391200_57391900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175877	chr9	+	175	1	Intergenic	novelGene_5364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCACACCCACAGTGACAC	NA	False	NA	NA	False	NA	NA	NA	57402238	57402413	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_57402200_57402400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175920	chr9	-	1785	8	FSM	ENSMUSG00000032306.15	ENSMUST00000034856.15	1780	8	-10	5	-10	-5	multi-exon	FALSE	canonical	3	201	junction_3	33.2393914333151	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGAGCAGTCAGCCTTT	8941	False	NA	-13	True	ATTAAA	-25	NA	57460056	57451543	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_57452222_57452477_57452687_57453676_57453851_57455810_57455994_57456319_57456462_57457855_57458057_57459429_57459558_57459986
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175933	chr9	+	2344	9	FSM	ENSMUSG00000040188.11	ENSMUST00000045791.11	2340	9	-1	-3	-1	3	multi-exon	TRUE	canonical	3	243	junction_4	15.3927742788621	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCCCTGATGTCAATGGT	NA	False	NA	16	True	AATAAA	-18	NA	57468224	57496081	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_57468394_57484475_57484545_57484921_57485021_57486715_57486834_57488066_57488196_57488772_57488933_57490134_57490237_57494362_57494484_57494704
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175944	chr9	-	2782	14	NIC	ENSMUSG00000032312.8	novel	2749	13	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_13	41.3604447574315	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCTCGGCGCTTCCTC	NA	False	NA	-25	True	AATAAA	-23	NA	57552918	57533928	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57541277_57541329_57552277
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175947	chr9	-	2759	13	FSM	ENSMUSG00000032312.8	ENSMUST00000034863.8	2749	13	-10	0	-10	0	multi-exon	FALSE	canonical	3	100	junction_12	11.433381924095	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCTCGGCGCTTCCTC	NA	False	NA	-25	True	AATAAA	-23	NA	57552946	57533928	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57552277
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175958	chr9	+	3759	1	Intergenic	novelGene_5365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCTACTTAAGCTCCAAAG	6304	False	NA	NA	False	NA	NA	NA	57547781	57551540	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_57547800_57551500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175965	chr9	+	218	1	Intergenic	novelGene_5366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	346	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAAAGGTTAGACGCTCA	NA	False	NA	NA	False	NA	NA	NA	57556256	57556474	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_57556300_57556500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175970	chr9	+	203	1	Intergenic	novelGene_5367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAAATTCAAGCT	NA	False	NA	NA	False	NA	NA	NA	57557047	57557250	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_57557000_57557200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175971	chr9	+	187	1	Intergenic	novelGene_5368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACCACATATGTGACATA	8794	False	NA	NA	False	NA	NA	NA	57569800	57569987	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_57569800_57570000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175975	chr9	-	198	1	Intergenic	novelGene_5369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTATGGCATTTTGGCTC	NA	False	NA	NA	False	NA	NA	NA	57570698	57570500	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_57570500_57570700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000175993	chr9	-	220	1	Intergenic	novelGene_5370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCTTTCTCTCCAGCCC	3706	False	NA	NA	False	NA	NA	NA	57624973	57624753	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_57624800_57625000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176016	chr9	+	198	1	Intergenic	novelGene_5371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGGGCTTCTCTGTGTAG	NA	False	NA	NA	False	NA	NA	NA	57663829	57664027	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_57663800_57664000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176027	chr9	-	4047	9	NIC	ENSMUSG00000004661.16	novel	4171	9	NA	NA	6	0	intron_retention	FALSE	canonical	3	208	junction_3	16.1303285769385	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTATGGGATCCTTTCA	NA	False	NA	-3	True	AATAAA	-20	NA	57744070	57697635	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743964
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176045	chr9	+	1369	11	FSM	ENSMUSG00000055720.11	ENSMUST00000163329.2	1364	11	-3	-2	-3	2	multi-exon	FALSE	canonical	3	118	junction_1	59.3140792729686	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGTCCAGTGCTTGGC	NA	False	NA	18	True	AATATA	-19	NA	57818265	57837253	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_57818343_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176060	chr9	+	1475	12	NIC	ENSMUSG00000055720.11	novel	1364	11	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	84.997131696865	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGTCCAGTGCTTGGC	NA	False	NA	18	True	AATATA	-19	NA	57818268	57837253	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_57818343_57818999_57819109_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176071	chr9	+	197	1	Intergenic	novelGene_5372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGTGGAACCTTAGGAA	2157	False	NA	NA	False	NA	NA	NA	57829447	57829644	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_57829400_57829600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176080	chr9	-	223	1	Intergenic	novelGene_5373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCCTTTGAGGTTTAATC	NA	False	NA	NA	False	NA	NA	NA	57915128	57914905	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_57914900_57915100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176083	chr9	+	186	1	Intergenic	novelGene_5374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTACCTCTCTTCAAAGAA	NA	False	NA	NA	False	NA	NA	NA	58077169	58077355	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_58077200_58077400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176109	chr9	-	3057	11	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	24	1	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	112.525063874676	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTCTGTAATTTTGC	2175	False	NA	-12	True	NA	NA	NA	58157045	58125823	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_-_58126012_58126793_58126953_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176122	chr9	+	194	1	Intergenic	novelGene_5375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTATGTCATTCCCAGTTA	576	False	NA	NA	False	NA	NA	NA	58135667	58135861	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_58135700_58135900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176126	chr9	-	203	1	Intergenic	novelGene_5376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCCACAAGTCAAAATAAAC	7120	False	NA	NA	False	NA	NA	NA	58152100	58151897	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_58151900_58152100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176129	chr9	+	1964	7	FSM	ENSMUSG00000032333.7	ENSMUST00000034883.7	1984	7	20	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	85.7729561108861	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAAGTGCAGCTGGCTG	NA	False	NA	11	True	AATAAA	-22	NA	58160466	58169803	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_58160683_58162216_58162324_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176137	chr9	+	2192	8	FSM	ENSMUSG00000032333.7	ENSMUST00000216877.2	2236	8	44	0	44	0	multi-exon	FALSE	canonical	3	65	junction_3	134.059079269902	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAAGTGCAGCTGGCTG	NA	False	NA	11	True	AATAAA	-22	NA	58160518	58169803	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_58160683_58162216_58162324_58162816_58163097_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176143	chr9	-	227	1	Intergenic	novelGene_5377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCAAAAAGTTTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	58208019	58207792	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_58207800_58208000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176165	chr9	+	158	1	Intergenic	novelGene_5378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTTTTTTAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58480734	58480892	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_58480700_58480900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176178	chr9	+	1917	8	FSM	ENSMUSG00000032336.18	ENSMUST00000176896.8	841	8	-161	-915	-12	-1	multi-exon	FALSE	canonical	3	20	junction_5	128.573492046933	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGGAATAATACTCTTT	525	False	NA	NA	False	AATAAA	-15	NA	58489562	58560160	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58550968_58557779_58557802_58558540_58558616_58559141
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176190	chr9	-	884	6	FSM	ENSMUSG00000074269.11	ENSMUST00000098674.6	883	6	-18	17	-18	5	multi-exon	FALSE	canonical	0	0	junction_3	244.73054570282	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAATGTTTTATTGTTAA	9032	False	NA	0	True	AATAAA	-23	NA	58648860	58560155	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_58560390_58565039_58565127_58567456_58567655_58573115_58573200_58619298_58619389_58648669
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176202	chr9	-	5405	28	FSM	ENSMUSG00000032340.9	ENSMUST00000214547.2	5414	28	-23	32	-7	-32	multi-exon	FALSE	canonical	3	72	junction_21	17.5900582969936	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTGTGAGATTACAGATC	NA	False	NA	-48	True	NA	NA	NA	58943731	58783869	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176210	chr9	+	202	1	Intergenic	novelGene_5379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTATTTTGATCTCCT	NA	False	NA	NA	False	NA	NA	NA	59118365	59118567	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_59118400_59118600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176220	chr9	+	120	1	Intergenic	novelGene_5380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAGTTCAAAGTCA	NA	False	NA	NA	False	NA	NA	NA	59197561	59197681	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_59197600_59197700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176221	chr9	+	2494	7	FSM	ENSMUSG00000025236.12	ENSMUST00000026266.9	2464	7	-26	-4	-12	0	multi-exon	FALSE	canonical	3	314	junction_6	118.522032644662	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGTCTAATTGATTTT	NA	False	NA	19	True	ATTAAA	-20	NA	59198828	59223483	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59220322_59220520_59221035_59221135_59222016
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176222	chr9	+	2500	7	FSM	ENSMUSG00000025236.12	ENSMUST00000217570.2	2484	7	-12	-4	-12	3	multi-exon	FALSE	canonical	3	305	junction_6	121.65205391699	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCTAATTGATTTTGTT	NA	False	NA	22	True	ATTAAA	-23	NA	59198828	59223486	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59220322_59220520_59221035_59221135_59222013
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176240	chr9	+	5160	6	FSM	ENSMUSG00000025236.12	ENSMUST00000214361.2	5148	6	-12	0	-1	0	multi-exon	FALSE	canonical	3	314	junction_5	128.284059804794	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGTCTAATTGATTTT	NA	False	NA	19	True	ATTAAA	-20	NA	59198853	59223483	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59220520_59221035_59221135_59222016
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176258	chr9	+	5127	6	NIC	ENSMUSG00000025236.12	novel	5148	6	NA	NA	24	0	intron_retention	FALSE	canonical	3	305	junction_5	131.862655820365	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGTCTAATTGATTTT	NA	False	NA	19	True	ATTAAA	-20	NA	59198889	59223483	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59220520_59221035_59221135_59222013
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176269	chr9	-	2465	16	FSM	ENSMUSG00000025235.9	ENSMUST00000026265.8	2518	16	53	0	-6	0	multi-exon	TRUE	canonical	3	108	junction_2	13.5581054068119	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGATCACTGTCTGTCTT	NA	False	NA	-18	True	AATAAA	-2	NA	59260738	59229272	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_59230266_59230670_59230873_59231319_59231462_59232072_59232143_59234469_59234642_59234738_59234892_59235862_59235932_59237700_59237756_59240762_59240891_59243646_59243701_59247093_59247167_59248369_59248482_59249770_59249835_59251342_59251423_59253082_59253135_59260692
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176274	chr9	-	5215	14	FSM	ENSMUSG00000025234.12	ENSMUST00000171975.8	6971	14	-87	1843	-83	-1843	multi-exon	TRUE	canonical	3	295	junction_6	43.7741649239926	224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTTATGTTTATTTTTA	NA	False	NA	0	True	AATAAA	-28	NA	59393984	59297383	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176294	chr9	+	184	1	Intergenic	novelGene_5381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAAGCAGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	59429830	59430014	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_59429800_59430000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176296	chr9	+	1938	14	FSM	ENSMUSG00000025232.9	ENSMUST00000026262.8	1996	14	61	-3	61	3	multi-exon	FALSE	canonical	3	1100	junction_8	84.5408762866438	662	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGGTTGCTTGTGTAAA	NA	False	NA	35	True	AATAAA	-27	NA	59446883	59472395	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149_59470334_59470506_59470598_59471165_59471271_59472103
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176316	chr9	+	176	1	Intergenic	novelGene_5382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAGATCAATAAACATCAG	NA	False	NA	NA	False	NA	NA	NA	59480776	59480952	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_59480800_59481000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176324	chr9	+	191	1	Intergenic	novelGene_5383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGAGCTGGAAGGAACAG	4476	False	NA	NA	False	NA	NA	NA	59491232	59491423	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_59491200_59491400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176328	chr9	-	236	1	Intergenic	novelGene_5384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGGATTTCTCAGAGGG	NA	False	NA	NA	False	NA	NA	NA	59512727	59512491	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_59512500_59512700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176336	chr9	+	196	1	Genic_Genomic	ENSMUSG00000025237.17	novel	NA	NA	NA	NA	-130	-3241	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGGACTAGGGATGTGAC	NA	False	NA	NA	False	NA	NA	NA	59528708	59528904	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr9_+_59528700_59528900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176345	chr9	+	2448	11	FSM	ENSMUSG00000032294.18	ENSMUST00000034834.16	2432	11	-16	0	-16	0	multi-exon	FALSE	canonical	3	15664	junction_5	1339.70741581884	5921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGTTTT	1648	False	NA	20	True	AATAAA	-20	NA	59563634	59586658	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176382	chr9	+	2210	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	3	145	junction_1	5271.33028750808	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1872	False	NA	17	True	AATAAA	-17	NA	59563858	59586655	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_+_59563922_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176385	chr9	+	2376	12	NIC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	3	90	junction_2	6691.00290201034	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1872	False	NA	17	True	AATAAA	-17	NA	59563858	59586655	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_59563933_59566281_59566437_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176393	chr9	+	2270	11	NIC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	2	38	junction_1	5302.45371596962	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1872	False	NA	17	True	AATAAA	-17	NA	59563858	59586655	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_59563982_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176406	chr9	+	2189	11	Fusion	ENSMUSG00000032294.18_ENSMUSG00000111394.2	novel	725	6	NA	NA	-6	0	multi-exon	FALSE	canonical	3	209	junction_1	5252.72002299761	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGTTTT	2528	False	NA	20	True	AATAAA	-20	NA	59564514	59586658	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr9_+_59564554_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176409	chr9	+	2201	11	Fusion	ENSMUSG00000032294.18_ENSMUSG00000111394.2	novel	625	5	NA	NA	4	-3	multi-exon	FALSE	canonical	3	73	junction_1	5292.27187132332	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	2540	False	NA	17	True	AATAAA	-17	NA	59564526	59586655	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chr9_+_59564581_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176424	chr9	-	174	1	Intergenic	novelGene_5385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTAAAAAAGAGCTC	NA	False	NA	NA	False	NA	NA	NA	59591072	59590898	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_59590900_59591100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176439	chr9	+	193	1	Intergenic	novelGene_5386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTGAGTGTCCTCCTGC	743	False	NA	NA	False	NA	NA	NA	59710206	59710399	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_59710200_59710400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176443	chr9	+	1667	1	Intergenic	novelGene_5387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGCTGGGGACACTGGAC	NA	False	NA	NA	False	NA	NA	NA	59844011	59845678	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_59844000_59845700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176451	chr9	+	194	1	Intergenic	novelGene_5388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACTAGAAGAGTACAGAAT	NA	False	NA	NA	False	NA	NA	NA	60588685	60588879	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_60588700_60588900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176459	chr9	+	187	1	Intergenic	novelGene_5389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCACAGAAAAGCTTTTAGA	NA	False	NA	NA	False	NA	NA	NA	60684794	60684981	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_60684800_60685000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176474	chr9	+	4490	19	FSM	ENSMUSG00000034485.11	ENSMUST00000214354.2	4417	19	-62	-11	-62	0	multi-exon	FALSE	canonical	3	92	junction_11	29.0464187886294	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGAGATGAGTGTGT	NA	False	NA	28	True	AATAAA	-29	NA	60701761	60787652	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_60701975_60748121_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761597_60761780_60763479_60763518_60766421_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60779566_60781314_60781468_60783643_60783710_60787455
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176477	chr9	+	4496	19	FSM	ENSMUSG00000034485.11	ENSMUST00000050183.7	4428	19	-68	0	-62	0	multi-exon	FALSE	canonical	3	41	junction_8	35.7857134056402	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGAGATGAGTGTGT	NA	False	NA	28	True	AATAAA	-29	NA	60701761	60787652	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_60701975_60748121_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761597_60761786_60763479_60763518_60766421_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60779566_60781314_60781468_60783643_60783710_60787455
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176484	chr9	-	201	1	Intergenic	novelGene_5390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCCCTCCGTCCCTAAC	NA	False	NA	NA	False	AAGAAA	-11	NA	60779990	60779789	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_60779800_60780000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176506	chr9	+	209	1	Intergenic	novelGene_5391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACAGAAAAATAGGACGA	NA	False	NA	NA	False	NA	NA	NA	61781192	61781401	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_61781200_61781400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176520	chr9	-	506	3	FSM	ENSMUSG00000007892.9	ENSMUST00000008036.9	499	3	0	-7	0	7	multi-exon	FALSE	canonical	3	11557	junction_2	345.5	230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTCTCACTTGTAAGCCA	NA	False	NA	-21	True	AATAAA	-21	NA	61821824	61820558	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_61820804_61821169_61821245_61821638
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176527	chr9	-	3131	23	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	50	junction_16	70.2958329649162	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	0	True	AATAAA	-21	NA	61854056	61824558	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61840510_61840553_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176530	chr9	-	3109	22	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	-20	3	combination_of_known_junctions	FALSE	canonical	3	131	junction_5	37.7146464629211	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	0	True	AATAAA	-21	NA	61854076	61824558	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176537	chr9	-	3416	23	FSM	ENSMUSG00000032254.11	ENSMUST00000034815.9	3398	23	-15	-3	-15	3	multi-exon	FALSE	canonical	3	138	junction_5	42.1913194628531	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	0	True	AATAAA	-21	NA	61854071	61824558	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176562	chr9	+	200	1	Intergenic	novelGene_5392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGTATATGGAAAAGCACA	5055	False	NA	NA	False	NA	NA	NA	61952056	61952256	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_61952100_61952300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176587	chr9	+	204	1	Intergenic	novelGene_5393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	601	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAATTGTTAGTTGAGCA	NA	False	NA	NA	False	NA	NA	NA	62233711	62233915	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_62233700_62233900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176615	chr9	+	190	1	Intergenic	novelGene_5394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGATTGCAATAG	NA	False	NA	NA	False	AATAAA	-10	NA	62525726	62525916	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_62525700_62525900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176625	chr9	+	212	1	Intergenic	novelGene_5395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTATGAGGTGATATGTGT	NA	False	NA	NA	False	TTTAAA	-13	NA	62620931	62621143	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_62620900_62621100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176628	chr9	-	212	1	Intergenic	novelGene_5396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGATGTCCTCTAGGCTG	NA	False	NA	NA	False	NA	NA	NA	62633734	62633522	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_62633500_62633700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176633	chr9	-	6792	2	FSM	ENSMUSG00000032244.10	ENSMUST00000034775.10	6785	2	-7	0	-7	0	multi-exon	FALSE	canonical	3	242	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGAAGTTTGTGTCTTTA	NA	False	NA	-5	True	AGTAAA	-18	NA	62719223	62699102	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_62705011_62718339
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176648	chr9	+	190	1	Intergenic	novelGene_5397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATCTTTCTAGCCTTAAT	NA	False	NA	NA	False	NA	NA	NA	62714810	62715000	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_62714800_62715000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176652	chr9	+	2256	7	FSM	ENSMUSG00000032245.13	ENSMUST00000034776.13	2142	7	-117	3	-117	-3	multi-exon	FALSE	canonical	3	52	junction_1	5.87130498460285	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGGCCGTGGCTGTTTC	NA	False	NA	10	True	AATAAA	-18	NA	62745949	62759285	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_62746237_62751851_62751967_62753235_62753335_62754247_62754437_62754866_62754923_62756390_62756514_62757898
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176659	chr9	-	217	1	Intergenic	novelGene_5398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCCTAAAGGACGCCTG	NA	False	NA	NA	False	NA	NA	NA	62760328	62760111	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_62760100_62760300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176661	chr9	-	3962	14	NNC	ENSMUSG00000032405.11	novel	5564	14	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	32.0279094267565	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTTCTGTAAAATGCT	NA	False	NA	2	True	AATAAA	-19	NA	62888165	62785647	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_-_62787936_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176664	chr9	-	4572	14	NIC	ENSMUSG00000032405.11	novel	5564	14	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	23.8180976391468	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTTCTGTAAAATGCT	NA	False	NA	2	True	AATAAA	-19	NA	62888165	62785647	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_62788546_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176681	chr9	-	185	1	Intergenic	novelGene_5399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGTTCCAAGTCA	3897	False	NA	NA	False	NA	NA	NA	62793023	62792838	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_62792800_62793000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176695	chr9	-	229	1	Intergenic	novelGene_5400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTATATATATAGGCAT	NA	False	NA	NA	False	AAGAAA	-33	NA	62990803	62990574	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_62990600_62990800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176709	chr9	-	2310	22	FSM	ENSMUSG00000058444.9	ENSMUST00000034920.11	2310	22	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_19	9.60607328677695	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGTTTGTCTCAGCAAGT	NA	False	NA	-1	True	AATAAA	-18	NA	63285184	63071049	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176713	chr9	+	188	1	Intergenic	novelGene_5401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTTGTTAATTATAAAG	6139	False	NA	NA	False	NA	NA	NA	63099575	63099763	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_63099600_63099800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176717	chr9	+	2621	10	FSM	ENSMUSG00000037257.9	ENSMUST00000041551.9	5294	10	-18	2691	-18	1569	multi-exon	FALSE	canonical	3	211	junction_6	53.7134601610168	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAATGTGTTTTGTTCTG	9196	False	NA	NA	False	ATTAAA	-22	NA	63509923	63549179	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543665_63543766_63546321_63546427_63546874_63546925_63547488
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176730	chr9	+	2594	10	NNC	ENSMUSG00000037257.9	novel	5294	10	NA	NA	6	1569	at_least_one_novel_splicesite	FALSE	canonical	3	162	junction_6	67.8911619914051	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAATGTGTTTTGTTCTG	9220	False	NA	NA	False	ATTAAA	-22	NA	63509947	63549179	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543668_63543766_63546321_63546427_63546874_63546925_63547488
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176742	chr9	-	207	1	Intergenic	novelGene_5402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAATTTGACCAAGTTAA	NA	False	NA	NA	False	NA	NA	NA	63720377	63720170	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_63720200_63720400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176758	chr9	-	2769	19	FSM	ENSMUSG00000032400.19	ENSMUST00000122091.8	2957	19	188	0	-3	0	multi-exon	FALSE	canonical	3	273	junction_16	368.954800838434	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGCCTGGTTTAATCTT	NA	False	NA	0	True	ACTAAA	-20	NA	64080198	64044425	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176781	chr9	+	191	1	Intergenic	novelGene_5403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGACTCCTGTGCTTCAA	NA	False	NA	NA	False	NA	NA	NA	64047872	64048063	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_64047900_64048100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176787	chr9	+	189	1	Intergenic	novelGene_5404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTAGCCAGGTCGTGGC	NA	False	NA	NA	False	NA	NA	NA	64077222	64077411	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_64077200_64077400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176790	chr9	+	1593	10	FSM	ENSMUSG00000032399.9	ENSMUST00000034966.9	1538	10	-39	-16	-39	16	multi-exon	FALSE	canonical	3	16882	junction_3	1427.06559842995	8725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTAGTCTACTTTATAA	NA	False	NA	32	True	AATAAA	-29	NA	64080617	64085964	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176805	chr9	+	5146	1	FSM	ENSMUSG00000119388.1	ENSMUST00000083895.3	99	1	-2049	-2998	-2049	2998	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	38	True	AATAAA	-20	NA	64080655	64085801	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_64080700_64085800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176818	chr9	+	856	4	FSM	ENSMUSG00000032399.9	ENSMUST00000213760.2	596	4	-11	-249	-11	-147	multi-exon	FALSE	canonical	3	19599	junction_2	572.368956375363	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	38	True	AATAAA	-20	NA	64084405	64085801	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_64084760_64085002_64085087_64085178_64085300_64085504
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176838	chr9	-	2528	11	FSM	ENSMUSG00000004936.9	ENSMUST00000005066.9	2436	11	-88	-4	-88	4	multi-exon	TRUE	canonical	3	469	junction_6	51.6454257412987	386	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGGCACACCTTTCAA	NA	False	NA	-9	True	AATAAA	-42	NA	64161001	64093047	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_64094081_64094572_64094619_64094958_64095021_64098548_64098614_64098734_64098937_64100983_64101109_64111712_64111765_64112392_64112471_64119865_64120013_64121680_64121892_64160494
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176848	chr9	-	185	1	Intergenic	novelGene_5405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAACAGAAAGCTACA	NA	False	NA	NA	False	NA	NA	NA	64098339	64098154	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_64098200_64098300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176853	chr9	+	205	1	Intergenic	novelGene_5406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAAACTTAGGGCAGTAA	NA	False	NA	NA	False	NA	NA	NA	64151849	64152054	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_64151800_64152100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176861	chr9	+	194	1	Intergenic	novelGene_5407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGTAAGCCAATGATCT	NA	False	NA	NA	False	NA	NA	NA	64168557	64168751	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_64168600_64168800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176863	chr9	+	191	1	Intergenic	novelGene_5408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACAACCAGGGCTGGTG	3554	False	NA	NA	False	NA	NA	NA	64182873	64183064	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_64182900_64183100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176871	chr9	-	192	1	Intergenic	novelGene_5409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGCCGGGCGTGGTGG	259	False	NA	NA	False	NA	NA	NA	64185851	64185659	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_64185700_64185900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176882	chr9	+	193	1	Intergenic	novelGene_5410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	905	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTATGGTTGTGTATGTA	7798	False	NA	14	True	NA	NA	NA	64187117	64187310	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_64187100_64187300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176892	chr9	+	1242	8	NIC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	-1	11	combination_of_known_junctions	FALSE	canonical	3	673	junction_1	630.170951862611	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTTTCTCACCATGAT	9544	False	NA	25	True	AATAAA	-25	NA	64188863	64212085	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_64188930_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176900	chr9	+	1230	8	NIC	ENSMUSG00000032397.8	novel	1841	8	NA	NA	0	8	combination_of_known_junctions	FALSE	canonical	3	479	junction_1	696.204344855674	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTGAGTTTCTCACCAT	9547	False	NA	22	True	AATAAA	-22	NA	64188866	64212082	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_64188930_64195395_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176904	chr9	+	1241	8	FSM	ENSMUSG00000032397.8	ENSMUST00000034964.7	1211	8	-22	-8	0	8	multi-exon	FALSE	canonical	3	540	junction_1	675.401679425976	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTGAGTTTCTCACCAT	9547	False	NA	22	True	AATAAA	-22	NA	64188866	64212082	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_64188935_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176908	chr9	+	1234	8	FSM	ENSMUSG00000032397.8	ENSMUST00000216594.2	1841	8	-17	624	1	8	multi-exon	FALSE	canonical	3	410	junction_1	719.77354715471	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTGAGTTTCTCACCAT	9548	False	NA	22	True	AATAAA	-22	NA	64188867	64212082	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_64188935_64195395_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176937	chr9	+	140	1	FSM	ENSMUSG00000088254.3	ENSMUST00000157629.3	135	1	-2	-3	-2	3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAACTTTTTAAACA	NA	False	NA	29	True	NA	NA	NA	64203210	64203350	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_64203200_64203400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176949	chr9	+	221	1	Intergenic	novelGene_5411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1008	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACAGCTGGGAAGTATAAA	NA	False	NA	NA	False	AAAAAG	-21	NA	64223918	64224139	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_64223900_64224100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176957	chr9	+	186	1	Intergenic	novelGene_5412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCAGGTTTGAGTCCTCT	4967	False	NA	NA	False	NA	NA	NA	64298979	64299165	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_64299000_64299200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176964	chr9	+	208	1	Intergenic	novelGene_5413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAGACCGTAAGTTCAG	NA	False	NA	NA	False	NA	NA	NA	64617795	64618003	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_64617800_64618000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176971	chr9	+	185	1	Intergenic	novelGene_5414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCAACTTATTTAATGAG	NA	False	NA	NA	False	NA	NA	NA	64620272	64620457	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_64620300_64620500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176986	chr9	+	177	1	Intergenic	novelGene_5415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTATAGCTCAAAAGTCG	NA	False	NA	NA	False	TTTAAA	-2	NA	64642469	64642646	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_64642500_64642600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176989	chr9	-	186	1	Intergenic	novelGene_5416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACAATAAAGCCCCACAG	NA	False	NA	NA	False	NA	NA	NA	64649071	64648885	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_64648900_64649100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000176995	chr9	+	184	1	Intergenic	novelGene_5417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGTGATGATCTCAGGG	NA	False	NA	NA	False	NA	NA	NA	64672701	64672885	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_64672700_64672900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177002	chr9	-	205	1	Intergenic	novelGene_5418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGCAGATTATCTTGCA	NA	False	NA	NA	False	NA	NA	NA	64707537	64707332	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_64707300_64707500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177008	chr9	+	123	1	Genic_Genomic	ENSMUSG00000053641.10	novel	NA	NA	NA	NA	-6330	14	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGTCATAGGAGAGCCC	1936	False	NA	NA	False	NA	NA	NA	64808148	64808271	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr9_+_64808100_64808300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177018	chr9	-	183	1	Intergenic	novelGene_5419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAAGAAAAGCTGGGT	883	False	NA	NA	False	NA	NA	NA	64829242	64829059	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_64829100_64829200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177021	chr9	+	212	1	Intergenic	novelGene_5420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGGTCAGGGCCAGGCT	NA	False	NA	NA	False	TTTAAA	-9	NA	64865732	64865944	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_64865700_64865900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177041	chr9	-	2736	11	FSM	ENSMUSG00000033629.7	ENSMUST00000036615.7	2709	11	-24	-3	-24	3	multi-exon	FALSE	canonical	3	252	junction_1	24.7620677650313	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGCTTAAACATCATTT	NA	False	NA	2	True	ATTAAA	-26	NA	64928999	64894261	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_64895812_64897598_64897731_64898255_64898363_64899538_64899652_64905476_64905605_64908262_64908374_64911538_64911591_64912889_64913055_64913842_64913917_64917755_64917799_64928738
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177051	chr9	+	201	1	Intergenic	novelGene_5421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTAAAACTCAATGTTATA	NA	False	NA	NA	False	NA	NA	NA	64902056	64902257	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_64902100_64902300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177078	chr9	+	4398	14	FSM	ENSMUSG00000032394.7	ENSMUST00000034961.6	3146	14	-93	-1159	-93	1159	multi-exon	FALSE	canonical	3	39	junction_11	21.5941587543412	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGAGGTTTTTTTTTTTT	NA	False	NA	32	True	AATAAA	-21	NA	65048377	65094313	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_65048836_65051537_65051844_65084676_65084822_65085147_65085279_65085657_65085796_65087322_65087482_65088417_65088584_65088806_65089055_65089237_65089403_65089983_65090176_65090281_65090387_65091114_65091194_65091314_65091523_65092415
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177098	chr9	+	2500	7	FSM	ENSMUSG00000032392.12	ENSMUST00000069000.9	2482	7	-18	0	-18	0	multi-exon	FALSE	canonical	3	27	junction_1	17.0269394392142	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAAGTTGTCTGTGACTG	NA	False	NA	NA	False	AATAAA	-15	NA	65121953	65146500	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_65122146_65122630_65122915_65133334_65133473_65137087_65137295_65140950_65141123_65143922_65144065_65145135
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177107	chr9	+	198	1	Intergenic	novelGene_5422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAACCATGCAGGAACA	NA	False	NA	NA	False	NA	NA	NA	65156442	65156640	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_65156400_65156600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177113	chr9	+	217	1	Intergenic	novelGene_5423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAAGTTGCAAAGGAGAA	NA	False	NA	NA	False	AATATA	-4	NA	65164099	65164316	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_65164100_65164300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177137	chr9	+	2453	5	FSM	ENSMUSG00000041837.5	ENSMUST00000048184.4	2419	5	-33	-1	-33	1	multi-exon	FALSE	canonical	3	267	junction_1	28.3846349280733	287	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCCCCTGATTTATTC	NA	False	NA	43	True	AATAAA	-26	NA	65253352	65266926	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_65254291_65261891_65262031_65263526_65263764_65263999_65264088_65265875
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177147	chr9	-	187	1	Intergenic	novelGene_5424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTAATGAAATCTGATGC	NA	False	NA	NA	False	NA	NA	NA	65275425	65275238	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_65275200_65275400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177148	chr9	+	3198	4	FSM	ENSMUSG00000086228.4	ENSMUST00000239433.2	846	4	-186	-2166	-186	-162	multi-exon	FALSE	canonical	3	844	junction_1	5.79271573232759	229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGGTTTTCTCATTCA	NA	False	NA	NA	False	NA	NA	NA	65278941	65287497	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_65279411_65281031_65281242_65284190_65284293_65285080
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177160	chr9	+	2057	9	FSM	ENSMUSG00000059183.13	ENSMUST00000074792.7	2042	9	-8	-7	-8	7	multi-exon	FALSE	canonical	3	114	junction_5	22.1472345903501	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGCCCAGGGTATATGA	NA	False	NA	NA	False	NA	NA	NA	65343055	65360343	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_65343290_65344269_65344480_65346811_65346935_65347627_65347731_65348894_65348971_65351160_65351253_65354505_65354585_65355977_65356061_65359286
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177170	chr9	+	1690	9	FSM	ENSMUSG00000032388.8	ENSMUST00000034955.8	2680	9	-20	1010	-20	-1010	multi-exon	FALSE	canonical	3	680	junction_7	65.1440711039769	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTTCTGTGATGAGTGA	7156	False	NA	15	True	AATAAA	-17	NA	65368208	65394742	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_65368437_65372545_65372633_65376056_65376219_65380919_65381001_65383121_65383268_65387660_65387770_65389142_65389251_65391723_65391865_65394114
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177179	chr9	+	185	1	Intergenic	novelGene_5425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCACTACCACTCCCAC	NA	False	NA	NA	False	NA	NA	NA	65478743	65478928	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_65478700_65478900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177189	chr9	+	216	1	Intergenic	novelGene_5426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGTGTACTCATATAAAT	NA	False	NA	NA	False	NA	NA	NA	65481463	65481679	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_65481500_65481700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177198	chr9	-	186	1	Intergenic	novelGene_5427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATACTCACTTCCAGGCAG	NA	False	NA	NA	False	NA	NA	NA	65489564	65489378	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_65489400_65489600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177202	chr9	+	193	1	Intergenic	novelGene_5428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAACAAAAACAAGCACGCC	NA	False	NA	NA	False	NA	NA	NA	65490975	65491168	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_65491000_65491200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177211	chr9	+	3696	12	FSM	ENSMUSG00000041064.15	ENSMUST00000047099.13	3685	12	-11	0	1	0	multi-exon	FALSE	canonical	3	64	junction_6	26.5476337835245	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGCCTCCTGCCTGGTCT	NA	False	NA	27	True	AATAAA	-17	NA	65494475	65503249	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177228	chr9	+	198	1	Intergenic	novelGene_5429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTGCACACACACACA	NA	False	NA	NA	False	NA	NA	NA	65498320	65498518	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_65498300_65498500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177235	chr9	+	190	1	Intergenic	novelGene_5430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGATGAAGGGGCTAGGG	NA	False	NA	NA	False	NA	NA	NA	65503570	65503760	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_65503600_65503800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177236	chr9	-	190	1	Intergenic	novelGene_5431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAAGTTTTCTACCATT	7074	False	NA	NA	False	NA	NA	NA	65505638	65505448	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_65505400_65505600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177243	chr9	+	188	1	Intergenic	novelGene_5432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTTCCACTTCAAAGGT	NA	False	NA	NA	False	NA	NA	NA	65516640	65516828	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_65516600_65516800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177245	chr9	-	206	1	Intergenic	novelGene_5433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACACCTTCTCCAGAACTC	6684	False	NA	NA	False	NA	NA	NA	65523120	65522914	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_65522900_65523100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177258	chr9	+	1926	9	NIC	ENSMUSG00000032387.16	novel	1803	9	NA	NA	-7	2	combination_of_known_junctions	FALSE	canonical	3	108	junction_1	514.959813359256	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGATTTTTGCTTCTACG	NA	False	NA	18	True	AATAAA	-18	NA	65536922	65567812	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_65537005_65537987_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177269	chr9	+	2028	8	FSM	ENSMUSG00000032387.16	ENSMUST00000055844.10	1987	8	-31	-10	-31	8	multi-exon	FALSE	canonical	3	1453	junction_4	112.168059042616	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTCTACGATCCAT	NA	False	NA	24	True	AATAAA	-24	NA	65537809	65567818	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177276	chr9	+	1940	8	NNC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_5	561.049635841207	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTGATTTTTGCTT	NA	False	NA	13	True	AATAAA	-13	NA	65537847	65567807	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558867_65558987_65566416_65566487_65566719
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177284	chr9	+	1488	3	NIC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	13	1	combination_of_known_splicesites	FALSE	canonical	3	70	junction_1	814.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGATTTTTGCTTCTAC	NA	False	NA	17	True	AATAAA	-17	NA	65537853	65567811	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_65538180_65566416_65566487_65566719
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177299	chr9	+	1833	5	NIC	ENSMUSG00000040652.17	novel	1843	6	NA	NA	11	0	intron_retention	FALSE	canonical	3	365	junction_4	22.3983816379666	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTCTGTCTTTTTATTC	4615	False	NA	23	True	AATAAA	-17	NA	65583840	65597582	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_65584048_65593477_65593636_65595079_65595256_65596102_65596189_65596376
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177309	chr9	+	209	1	Intergenic	novelGene_5434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1258	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGACCTGCAAATGGGGA	NA	False	NA	NA	False	NA	NA	NA	65716771	65716980	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_65716800_65717000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177328	chr9	+	218	1	Intergenic	novelGene_5435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCACCCAACCAGGACACA	NA	False	NA	NA	False	NA	NA	NA	65781841	65782059	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_65781800_65782100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177344	chr9	+	185	1	Antisense	novelGene_ENSMUSG00000032386.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGAGTGGGGCTGGGGAT	NA	False	NA	NA	False	NA	NA	NA	65802495	65802680	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr9_+_65802500_65802700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177346	chr9	-	210	1	Intergenic	novelGene_5436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAGATTTATTTATT	NA	False	NA	NA	False	NA	NA	NA	65803389	65803179	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_65803200_65803400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177355	chr9	-	253	1	Intergenic	novelGene_5437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTTTATTCAATGTAT	NA	False	NA	NA	False	ATTAAA	-21	NA	65896989	65896736	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_65896700_65897000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177360	chr9	+	204	1	Intergenic	novelGene_5438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGTCATTCCCGGGCTG	NA	False	NA	NA	False	NA	NA	NA	65954087	65954291	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_65954100_65954300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177368	chr9	+	1022	5	FSM	ENSMUSG00000032383.8	ENSMUST00000034947.7	892	5	-129	-1	-120	1	multi-exon	FALSE	canonical	3	2090	junction_4	160.535626886994	289	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGGTGTGGGCTGTGTT	1445	False	NA	17	True	AATAAA	-17	NA	65967383	65973906	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_65967683_65968748_65968863_65970270_65970365_65972768_65972954_65973576
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177405	chr9	+	202	1	Intergenic	novelGene_5439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGACTTCCATAGGGTT	NA	False	NA	NA	False	NA	NA	NA	66390118	66390320	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_66390100_66390300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177414	chr9	-	3886	15	FSM	ENSMUSG00000032376.13	ENSMUST00000127569.8	5607	15	133	1588	-3	9	multi-exon	FALSE	canonical	3	110	junction_11	15.624418356521	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTGTCGTGTGTCACAC	NA	False	NA	NA	False	ATTAAA	-24	NA	66500291	66423506	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66449794_66449909_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124_66474186_66500065
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177425	chr9	-	231	1	Intergenic	novelGene_5440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGATTCATTCTGTCAAAT	NA	False	NA	NA	False	NA	NA	NA	66439946	66439715	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_66439700_66439900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177433	chr9	+	188	1	Intergenic	novelGene_5441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCCCCTCACATCTGGCA	4766	False	NA	NA	False	NA	NA	NA	66517384	66517572	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_66517400_66517600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177437	chr9	+	3640	10	FSM	ENSMUSG00000032373.16	ENSMUST00000085420.12	3639	10	-1	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	4.2687494916219	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACTGATTTTTTCCCCC	NA	False	NA	NA	False	AATAAA	-14	NA	66621010	66674124	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_66621216_66624841_66624863_66653751_66653932_66654857_66655004_66658211_66658308_66659224_66659289_66659568_66659727_66660976_66661104_66670528_66670617_66671569
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177440	chr9	+	198	1	Intergenic	novelGene_5442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGTAGGGGAGTAGGGGA	NA	False	NA	NA	False	NA	NA	NA	66637241	66637439	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_66637200_66637400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177451	chr9	+	182	1	Intergenic	novelGene_5443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTATTAAATAAATAATAATA	NA	False	NA	NA	False	NA	NA	NA	66744988	66745170	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_66745000_66745200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177459	chr9	-	4713	8	FSM	ENSMUSG00000036943.10	ENSMUST00000041139.9	4733	8	20	0	20	0	multi-exon	FALSE	canonical	2	19	junction_5	12.9992150469455	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGACTCTTAAGTGGATT	7771	False	NA	-1	True	AATAAA	-21	NA	66826949	66750945	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_66755094_66755879_66755931_66758615_66758682_66760208_66760299_66761949_66762028_66768118_66768180_66770704_66770766_66826791
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177472	chr9	+	508	4	FSM	ENSMUSG00000036781.14	ENSMUST00000040917.14	499	4	0	-9	0	5	multi-exon	FALSE	canonical	3	10808	junction_3	618.277355956765	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCTGCTTCTCTCTCTC	NA	False	NA	39	True	AATAAA	-23	NA	66853367	66856803	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_66853463_66854112_66854222_66854868_66854980_66856610
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177475	chr9	+	576	5	FSM	ENSMUSG00000036781.14	ENSMUST00000127896.8	575	5	1	-2	1	0	multi-exon	FALSE	canonical	3	168	junction_3	5596.89320069626	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTCCCTCTGCTTCTCT	NA	False	NA	34	True	AATAAA	-18	NA	66853373	66856798	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_66853463_66854112_66854222_66854868_66854980_66855920_66856000_66856610
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177484	chr9	-	185	1	Intergenic	novelGene_5444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGTAGTTCAGCA	9511	False	NA	NA	False	NA	NA	NA	66907094	66906909	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_66906900_66907100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177496	chr9	-	1735	8	FSM	ENSMUSG00000032366.16	ENSMUST00000113696.8	1714	8	-21	0	-21	0	multi-exon	FALSE	canonical	3	370	junction_1	100.853500541273	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGGTCCTGTCGTCTG	NA	False	NA	0	True	AATAAA	-26	NA	66951210	66929871	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177510	chr9	-	2651	8	NIC	ENSMUSG00000032366.16	novel	887	9	NA	NA	-20	-8	intron_retention	FALSE	canonical	3	256	junction_1	130.784134343269	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTGCTATTCTTTT	NA	False	NA	-16	True	AATAAA	-13	NA	66951209	66935255	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_66937025_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177515	chr9	+	228	1	Intergenic	novelGene_5445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCCAACACAGGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	66957571	66957799	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_66957600_66957800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177534	chr9	+	185	1	Intergenic	novelGene_5446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCAGTAGGAATTCATTG	NA	False	NA	NA	False	NA	NA	NA	68106266	68106451	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_68106300_68106500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177539	chr9	-	195	1	Intergenic	novelGene_5447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATACAGAGGGGCTGGAGA	NA	False	NA	NA	False	NA	NA	NA	68681135	68680940	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_68680900_68681100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177548	chr9	+	4104	16	FSM	ENSMUSG00000032235.16	ENSMUST00000034761.15	4169	16	17	48	0	-48	multi-exon	FALSE	canonical	3	101	junction_3	13.7737270030865	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTGTTTGTCATTTCA	4669	False	NA	21	True	AATAAA	-15	NA	69305204	69340356	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_69305336_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177556	chr9	+	1368	13	FSM	ENSMUSG00000032231.15	ENSMUST00000034756.15	1447	13	76	3	-20	-3	multi-exon	FALSE	canonical	3	66	junction_7	12.0908022893437	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGCCGTTGCCTTTGCTT	NA	False	NA	NA	False	AATAAA	-22	NA	69360977	69399074	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_69361022_69371741_69371807_69374572_69374673_69383334_69383430_69386959_69387074_69390255_69390347_69391061_69391142_69392479_69392540_69393751_69393846_69394834_69394931_69395336_69395396_69396933_69397057_69398727
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177565	chr9	+	2368	10	FSM	ENSMUSG00000011958.18	ENSMUST00000085393.13	2328	10	-38	-2	0	2	multi-exon	FALSE	canonical	3	219	junction_9	27.3933397330153	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTCTTAATTACCTTC	NA	False	NA	19	True	AATAAA	-19	NA	69896747	69915539	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69914345
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177585	chr9	+	1033	5	NIC	ENSMUSG00000033543.18	novel	1199	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	38	junction_3	356.599477705731	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGAGTAATACTTGATG	NA	False	NA	18	True	AATAAA	-16	NA	69919831	69930020	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_69919944_69922573_69922693_69924100_69924474_69926670_69926798_69929718
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177586	chr9	+	766	5	FSM	ENSMUSG00000033543.18	ENSMUST00000118198.8	893	5	0	127	0	1	multi-exon	FALSE	canonical	3	697	junction_3	95.7131129992124	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGAGTAATACTTGATGC	NA	False	NA	19	True	AATAAA	-17	NA	69919831	69930021	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_69919944_69922573_69922693_69924100_69924206_69926670_69926798_69929718
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177597	chr9	+	172	1	Intergenic	novelGene_5448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAAGGTTGTTTTCAT	NA	False	NA	NA	False	NA	NA	NA	69933231	69933403	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_69933200_69933400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177627	chr9	-	1577	9	FSM	ENSMUSG00000032218.8	ENSMUST00000034742.8	1531	9	-38	-8	-38	8	multi-exon	FALSE	canonical	3	1324	junction_2	68.4557338723353	699	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTATATTTGTATAG	NA	False	NA	0	True	AATAAA	-22	NA	70328867	70314965	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_70315312_70316561_70316673_70317402_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70326075_70326190_70326282_70326412_70328698
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177646	chr9	+	174	1	Intergenic	novelGene_5449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTTAAAAGAAG	2326	False	NA	4	True	NA	NA	NA	70323955	70324129	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_70324000_70324100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177661	chr9	-	4842	14	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-20	0	combination_of_known_junctions	TRUE	canonical	3	68	junction_2	77.5959798873276	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTCATAATTAGTG	2226	False	NA	-13	True	AATAAA	-21	NA	70411027	70332705	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177695	chr9	-	4892	15	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_14	71.3097941007676	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTTGTGTTTCATAAT	2210	False	NA	-18	True	AATAAA	-16	NA	70411043	70332710	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177701	chr9	-	4886	15	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-35	-1	combination_of_known_junctions	FALSE	canonical	3	128	junction_14	73.562863579113	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTTTGTGTTTCATA	2211	False	NA	-20	True	AATAAA	-14	NA	70411042	70332712	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177715	chr9	+	228	1	Intergenic	novelGene_5450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGCTACCTCTGAGCAA	NA	False	NA	NA	False	NA	NA	NA	70356099	70356327	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_70356100_70356300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177725	chr9	+	3828	21	FSM	ENSMUSG00000032212.11	ENSMUST00000049263.9	3691	21	-130	-7	-14	5	multi-exon	FALSE	canonical	3	132	junction_6	54.986612006924	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTATTGAGAACCTTTT	NA	False	NA	22	True	AATAAA	-23	NA	70450021	70499521	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480738_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177753	chr9	+	186	1	Intergenic	novelGene_5451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCATCGAGAAAGAGCTG	755	False	NA	NA	False	NA	NA	NA	70574366	70574552	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_70574400_70574600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177762	chr9	+	4687	16	FSM	ENSMUSG00000054693.15	ENSMUST00000067880.13	4593	16	-93	-1	-93	1	multi-exon	FALSE	canonical	3	235	junction_13	22.3632635264971	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGGTCTATGCTCTTTGG	4857	False	NA	15	True	AATAAA	-20	NA	70586185	70687512	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_70586542_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177775	chr9	+	180	1	Intergenic	novelGene_5452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCAGATCGACCAGATAG	NA	False	NA	NA	False	NA	NA	NA	71112827	71113007	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_71112800_71113000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177784	chr9	+	192	1	Intergenic	novelGene_5453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGTCTCCATCCCTACA	NA	False	NA	NA	False	NA	NA	NA	71209521	71209713	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_71209500_71209700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177806	chr9	-	192	1	Intergenic	novelGene_5454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAAGAAAAGCCACCTG	NA	False	NA	NA	False	NA	NA	NA	71458383	71458191	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_71458200_71458400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177814	chr9	-	198	1	Intergenic	novelGene_5455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGTAAGGAGATTCAGTGT	NA	False	NA	NA	False	NA	NA	NA	71726823	71726625	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_71726600_71726800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177834	chr9	+	196	1	Intergenic	novelGene_5456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGTTAGATTTTTGAAA	NA	False	NA	NA	False	NA	NA	NA	71904992	71905188	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_71905000_71905200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177854	chr9	+	197	1	Intergenic	novelGene_5457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTTAGGTGACAGGATA	NA	False	NA	NA	False	ATTAAA	-8	NA	72184761	72184958	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_72184800_72185000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177871	chr9	+	868	3	ISM	ENSMUSG00000032221.15	ENSMUST00000034746.10	5250	10	13826	3449	13826	-3449	3prime_fragment	FALSE	canonical	3	85	junction_1	11.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGAATTAGTCATTTTT	1866	False	NA	5	True	ATTAAA	-17	NA	72359642	72365858	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr9_+_72360121_72364059_72364186_72365594
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177896	chr9	+	208	1	Intergenic	novelGene_5458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTCAGGCTTCTCCCTTA	NA	False	NA	NA	False	TTTAAA	-5	NA	72376610	72376818	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_72376600_72376800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177898	chr9	+	197	1	Antisense	novelGene_ENSMUSG00000090626.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCAGGCTTGTCTTGTAA	NA	False	NA	NA	False	NA	NA	NA	72382509	72382706	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr9_+_72382500_72382700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177905	chr9	+	182	1	Intergenic	novelGene_5459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	244	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTGCATCTTTGCTGGC	NA	False	NA	8	True	NA	NA	NA	72425159	72425341	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_72425200_72425300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177908	chr9	-	182	1	Intergenic	novelGene_5460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAGAGAGGGAGAGGAAG	NA	False	NA	NA	False	NA	NA	NA	72430219	72430037	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_72430000_72430200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177912	chr9	+	204	1	Intergenic	novelGene_5461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGTACAAATATAGTTAG	3030	False	NA	NA	False	NA	NA	NA	72464826	72465030	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_72464800_72465000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177919	chr9	+	191	1	Intergenic	novelGene_5462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAAAGAACAGGAAGTG	2569	False	NA	NA	False	NA	NA	NA	72553693	72553884	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_72553700_72553900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177922	chr9	+	199	1	Intergenic	novelGene_5463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTTTATATATGTGAAAC	6966	False	NA	NA	False	NA	NA	NA	72558090	72558289	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_72558100_72558300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177924	chr9	+	5231	28	ISM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	7605	1	1271	-1	3prime_fragment	FALSE	canonical	3	2430	junction_6	165.698231668452	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	6430	False	NA	NA	False	AATAAA	-26	NA	72577232	72657133	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr9_+_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177938	chr9	+	2679	1	ISM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	84827	1	1334	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	72654454	72657133	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr9_+_72654500_72657100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177946	chr9	+	246	1	Intergenic	novelGene_5464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCATGGGCTGCAGTTGT	1404	False	NA	NA	False	AATGAA	-42	NA	72672664	72672910	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_72672700_72672900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177948	chr9	-	198	1	Intergenic	novelGene_5465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	296	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAATAATTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	72680631	72680433	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_72680400_72680600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177958	chr9	+	193	1	Intergenic	novelGene_5466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCCTTCCCAGCTCCCAG	730	False	NA	NA	False	NA	NA	NA	72694783	72694976	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_72694800_72695000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177964	chr9	+	202	1	Intergenic	novelGene_5467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTGGTTCAGTTCCCAG	NA	False	NA	NA	False	NA	NA	NA	72708975	72709177	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_72709000_72709200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177972	chr9	-	185	1	Intergenic	novelGene_5468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTGTTAGTGCCAGCAA	NA	False	NA	NA	False	NA	NA	NA	72731753	72731568	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_72731600_72731800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177978	chr9	+	188	1	FSM	ENSMUSG00000102330.2	ENSMUST00000193259.2	1441	1	-142	1395	-142	-1395	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGGGGACTAGAGGGCA	NA	False	NA	NA	False	NA	NA	NA	72796184	72796372	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_72796200_72796400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177982	chr9	+	191	1	FSM	ENSMUSG00000102330.2	ENSMUST00000193259.2	1441	1	396	854	396	-854	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATATAAAGTATATCCATC	NA	False	NA	NA	False	NA	NA	NA	72796722	72796913	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_72796700_72796900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177987	chr9	+	188	1	Intergenic	novelGene_5469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTGGCAGGGGACTAGA	5546	False	NA	NA	False	NA	NA	NA	72812889	72813077	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_72812900_72813100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000177995	chr9	+	1698	9	FSM	ENSMUSG00000092192.8	ENSMUST00000034734.9	1975	9	45	232	45	-229	multi-exon	FALSE	canonical	3	12	junction_2	4.44233891097922	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGGCTTTGGTATAATA	9223	False	NA	NA	False	ATTAAA	-20	NA	72866111	72880114	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_72866280_72867863_72868012_72868539_72868674_72869196_72869423_72871372_72871519_72872450_72872561_72876313_72876468_72879254_72879361_72879608
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178018	chr9	+	486	2	FSM	ENSMUSG00000098332.3	ENSMUST00000184126.3	496	2	6	4	-6	-4	multi-exon	FALSE	canonical	3	439	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATCTAAGTTATTTATAA	NA	False	NA	NA	False	AATAAA	-15	NA	72947005	72950057	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_72947148_72949713
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178033	chr9	+	1634	3	FSM	ENSMUSG00000092622.9	ENSMUST00000034737.13	1681	3	52	-5	52	5	multi-exon	FALSE	canonical	3	216	junction_2	18.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTGTGTATTTGAATGGA	NA	False	NA	31	True	AATAAA	-18	NA	73009731	73011725	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_73009958_73010111_73010292_73010497
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178043	chr9	+	1173	4	FSM	ENSMUSG00000092622.9	ENSMUST00000173734.9	1228	4	60	-5	-52	5	multi-exon	FALSE	canonical	3	51	junction_3	87.8116671569837	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTGTGTATTTGAATGGA	NA	False	NA	31	True	AATAAA	-18	NA	73009739	73011725	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_73009958_73010111_73010292_73010497_73011172_73011624
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178066	chr9	+	196	1	Intergenic	novelGene_5470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAGCCAGATTTTTAAAAA	6128	False	NA	NA	False	NA	NA	NA	73051025	73051221	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_73051000_73051200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178072	chr9	+	187	1	Intergenic	novelGene_5471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCCCTAGCTTAGAATAA	NA	False	NA	NA	False	NA	NA	NA	73211477	73211664	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_73211500_73211700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178076	chr9	-	171	1	Intergenic	novelGene_5472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAAACTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	73725394	73725223	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_73725200_73725400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178078	chr9	+	194	1	Intergenic	novelGene_5473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATCTGGACTATGCAGAA	NA	False	NA	NA	False	NA	NA	NA	74019459	74019653	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_74019500_74019700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178083	chr9	+	3908	4	FSM	ENSMUSG00000007656.14	ENSMUST00000169492.8	3963	4	55	0	-8	0	multi-exon	FALSE	canonical	3	3551	junction_1	1114.80232428096	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGTTTTGTCTTATTT	NA	False	NA	20	True	AATAAA	-30	NA	74944950	74967595	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_74945002_74945188_74945244_74959514_74959638_74963916
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178088	chr9	+	3912	4	FSM	ENSMUSG00000007656.14	ENSMUST00000170308.8	429	4	-8	-3475	-8	0	multi-exon	FALSE	canonical	3	608	junction_1	2500.61556865949	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGTTTTGTCTTATTT	NA	False	NA	20	True	AATAAA	-30	NA	74944950	74967595	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_74945006_74945188_74945244_74959514_74959638_74963916
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178098	chr9	+	4044	3	FSM	ENSMUSG00000007656.14	ENSMUST00000007800.8	4046	3	2	0	2	0	multi-exon	FALSE	canonical	3	5814	junction_2	96	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGTTTTGTCTTATTT	NA	False	NA	20	True	AATAAA	-30	NA	74945001	74967595	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_74945244_74959514_74959638_74963916
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178115	chr9	+	181	1	NIC	ENSMUSG00000033590.9	novel	4782	30	NA	NA	-5324	-7647	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACAAAATAATTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	75157820	75158001	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_75157800_75158000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178125	chr9	+	170	1	Intergenic	novelGene_5474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGATGTTGCCAGACAG	NA	False	NA	NA	False	NA	NA	NA	75284678	75284848	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_75284700_75284800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178133	chr9	-	4218	6	FSM	ENSMUSG00000042688.17	ENSMUST00000049355.11	4072	6	-24	-122	-24	120	multi-exon	FALSE	canonical	3	266	junction_5	19.2727787306346	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTTTGACTCTTTAGAA	NA	False	NA	-22	True	AATAAA	-20	NA	75317311	75294063	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75317144
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178151	chr9	+	2211	12	FSM	ENSMUSG00000042487.7	ENSMUST00000048937.6	2180	12	-26	-5	-14	5	multi-exon	FALSE	canonical	3	353	junction_2	48.4889013457617	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCTTAAGAAAACTGCTT	900	False	NA	10	True	AATAAA	-19	NA	75348791	75373719	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_75348918_75352516_75353276_75354383_75354489_75355583_75355679_75356638_75356785_75357769_75357855_75361905_75362001_75362922_75363058_75364339_75364476_75365356_75365544_75368287_75368386_75373475
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178166	chr9	-	3692	10	FSM	ENSMUSG00000058587.10	ENSMUST00000072232.9	3667	10	-26	1	-26	-1	multi-exon	FALSE	canonical	3	422	junction_2	36.4461381720248	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGCTGTATGCCACATT	NA	False	NA	70	True	AATAAA	-29	NA	75466965	75404989	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178179	chr9	-	242	1	Intergenic	novelGene_5475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTCTACTTATATGTGA	NA	False	NA	NA	False	NA	NA	NA	75443716	75443474	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_75443500_75443700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178188	chr9	+	1214	3	FSM	ENSMUSG00000032184.6	ENSMUST00000034702.6	1189	3	-23	-2	-23	2	multi-exon	FALSE	canonical	3	61	junction_2	3	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCATTTCTCTTATTTA	NA	False	NA	9	True	AATAAA	-19	NA	75532999	75545055	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_75533320_75542667_75543000_75544493
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178197	chr9	+	226	1	Intergenic	novelGene_5476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTATTGCTGCAATAAAA	NA	False	NA	NA	False	NA	NA	NA	75962879	75963105	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_75962900_75963100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178206	chr9	+	193	1	Intergenic	novelGene_5477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCTGACCAGTTATACAA	NA	False	NA	NA	False	NA	NA	NA	76279156	76279349	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_76279200_76279300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178213	chr9	+	178	1	Intergenic	novelGene_5478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGCCTTTAATATA	NA	False	NA	NA	False	NA	NA	NA	77075507	77075685	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_77075500_77075700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178222	chr9	+	191	1	Intergenic	novelGene_5479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTGTCCATATACATAT	NA	False	NA	NA	False	NA	NA	NA	77400582	77400773	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_77400600_77400800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178229	chr9	+	3430	16	FSM	ENSMUSG00000032350.10	ENSMUST00000034905.9	3423	16	-3	-4	-3	4	multi-exon	FALSE	canonical	3	228	junction_1	20.3437131976114	216	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGTGTATGAGTGGCTTT	4417	False	NA	22	True	AATAAA	-25	NA	77661813	77701771	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178240	chr9	+	2792	8	FSM	ENSMUSG00000032349.14	ENSMUST00000034904.14	2782	8	-8	-2	-8	2	multi-exon	FALSE	canonical	3	515	junction_6	44.3764048354804	386	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTCTGTTGTTTGAT	NA	False	NA	13	True	ATTAAA	-21	NA	77824637	77891803	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_77824809_77864422_77864489_77868147_77868336_77883066_77883145_77884029_77884202_77887106_77887232_77888755_77888891_77889946
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178255	chr9	-	173	1	Intergenic	novelGene_5480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTGGTTCGA	NA	False	NA	NA	False	NA	NA	NA	77906256	77906083	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_77906100_77906300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178259	chr9	+	210	1	Intergenic	novelGene_5481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGTAATAACACAATGTAAA	1235	False	NA	NA	False	AATGAA	-12	NA	77963539	77963749	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_77963500_77963700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178271	chr9	+	2425	14	FSM	ENSMUSG00000009828.16	ENSMUST00000044551.8	6560	14	-30	4165	1	4	multi-exon	FALSE	canonical	2	83	junction_12	10.9192842819834	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTCTCATTATTTTCTT	NA	False	NA	7	True	TATAAA	-18	NA	78020566	78075224	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_78020738_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178286	chr9	+	954	7	FSM	ENSMUSG00000032348.7	ENSMUST00000034903.7	977	7	34	-11	34	11	multi-exon	FALSE	canonical	3	2717	junction_1	326.320735201155	390	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGTTTGTTTTGTTTTC	NA	False	NA	28	True	ATTAAA	-27	NA	78099262	78116642	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_78099347_78105551_78105659_78106771_78106824_78111513_78111647_78113193_78113336_78115082_78115215_78116338
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178303	chr9	+	197	1	Intergenic	novelGene_5482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGACCAGCATCACTGA	NA	False	NA	NA	False	NA	NA	NA	78242090	78242287	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_78242100_78242300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178314	chr9	-	681	3	FSM	ENSMUSG00000060461.6	ENSMUST00000071991.6	619	3	-21	-41	-21	41	multi-exon	FALSE	canonical	3	178157	junction_1	1580.5	4740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGGTGTCCGTTTGAATC	NA	False	NA	NA	False	ATTAAA	-43	NA	78275480	78274292	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_78274577_78275002_78275186_78275266
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178323	chr9	-	515	3	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	3	664	junction_2	88746.5	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275440	78274333	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_-_78274577_78275002_78275178_78275343
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178325	chr9	-	682	2	ISM	ENSMUSG00000060461.6	ENSMUST00000071991.6	619	3	18	0	18	0	intron_retention	FALSE	canonical	3	178157	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275441	78274333	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr9_-_78274577_78275002
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178328	chr9	-	653	4	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	3	3484	junction_1	82858.6360227801	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275441	78274333	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_-_78274577_78274796_78274849_78275002_78275186_78275266
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178332	chr9	-	566	3	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	3	7420	junction_2	85368.5	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275441	78274333	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_-_78274577_78275002_78275151_78275266
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178336	chr9	-	592	3	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	3	2030	junction_2	88063.5	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275440	78274333	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_-_78274577_78275002_78275178_78275266
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178357	chr9	-	1027	2	NIC	ENSMUSG00000060461.6	novel	619	3	NA	NA	18	0	intron_retention	FALSE	canonical	3	181318	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275441	78274333	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_78275186_78275266
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178363	chr9	-	1108	1	NIC	ENSMUSG00000060461.6	novel	619	3	NA	NA	18	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275441	78274333	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_78274300_78275400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178377	chr9	+	174	1	Intergenic	novelGene_5483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	274	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTTTCGAGACAGGG	NA	False	NA	6	True	NA	NA	NA	78279006	78279180	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_78279000_78279200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178413	chr9	+	2363	12	FSM	ENSMUSG00000032342.14	ENSMUST00000034896.13	2366	12	3	0	-2	0	multi-exon	FALSE	canonical	3	57	junction_9	10.2457409010559	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTAGGTGATTTTACG	NA	False	NA	19	True	AATAAA	-18	NA	78355492	78381434	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_78355793_78356700_78356901_78356999_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368114_78368320_78368801_78368974_78372165_78372285_78377912_78378074_78381071
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178420	chr9	-	178	1	Intergenic	novelGene_5484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATAAAAGACCAGCAGAG	9924	False	NA	NA	False	NA	NA	NA	78368758	78368580	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_78368600_78368800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178427	chr9	+	200	1	Intergenic	novelGene_5485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGATGTTGAGTGTTCTT	1969	False	NA	NA	False	NA	NA	NA	78371603	78371803	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_78371600_78371800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178440	chr9	+	175	1	Intergenic	novelGene_5486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	300	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAAATTGTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	78383421	78383596	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_78383400_78383600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178460	chr9	-	1792	8	NIC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	-10	-4	combination_of_known_junctions	FALSE	canonical	3	424	junction_7	4808.28362605321	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTGGTCAATGCTGA	NA	False	NA	98	True	ATTAAA	-18	NA	78396443	78385734	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792_78387971_78396355
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178461	chr9	-	1741	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	53	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	5015.73746180103	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTGGTCAATGCTGA	7153	False	NA	98	True	ATTAAA	-18	NA	78388953	78385734	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387788_78387971_78388920
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178462	chr9	-	1831	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	1031	-4	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_7	4936.36041253563	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTGGTCAATGCTGA	704	False	NA	98	True	ATTAAA	-18	NA	78395402	78385734	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792_78387971_78395275
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178467	chr9	-	1739	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	53	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5001.31346829643	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTGGTCAATGCTGA	7153	False	NA	98	True	ATTAAA	-18	NA	78388953	78385734	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387520_78387703_78387792_78387971_78388920
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178474	chr9	-	406	1	FSM	ENSMUSG00000076138.3	ENSMUST00000102184.3	108	1	-223	-75	-223	75	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTGGTCAATGCTGA	9966	False	NA	98	True	ATTAAA	-18	NA	78386140	78385734	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_78385700_78386100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178498	chr9	+	218	1	Intergenic	novelGene_5487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGTCAGCAGAGGTTGGG	NA	False	NA	NA	False	AATAAA	-15	NA	78412803	78413021	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_78412800_78413000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178509	chr9	+	192	1	Intergenic	novelGene_5488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTTACAGCAGTGACGT	NA	False	NA	NA	False	NA	NA	NA	78424738	78424930	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_78424700_78424900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178524	chr9	+	200	1	Intergenic	novelGene_5489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAAAATCTATCAGTACAT	2807	False	NA	NA	False	NA	NA	NA	78451017	78451217	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_78451000_78451200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178531	chr9	+	192	1	Intergenic	novelGene_5490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAAATTATTCTCTTCTT	9940	False	NA	NA	False	NA	NA	NA	78458150	78458342	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_78458200_78458300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178540	chr9	-	3082	1	FSM	ENSMUSG00000059422.6	ENSMUST00000182917.2	1201	1	-77	-1804	-77	1804	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTGGCTTTTGAAGTT	NA	False	NA	NA	False	TATAAA	-16	NA	78729197	78726115	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_78726100_78729200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178552	chr9	-	548	4	FSM	ENSMUSG00000032330.8	ENSMUST00000034881.8	659	4	111	0	-57	0	multi-exon	FALSE	canonical	3	5621	junction_3	439.918426781855	670	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTCAGCAGTTGGCA	NA	False	NA	0	True	AATAAA	-16	NA	79667049	79662642	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_79662888_79663558_79663644_79665771_79665862_79666921
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178579	chr9	+	4384	24	FSM	ENSMUSG00000034252.15	ENSMUST00000165607.9	3495	24	-612	-277	-22	12	multi-exon	FALSE	canonical	0	0	junction_3	90.822246885334	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTTTAGTGAACTTGCA	NA	False	NA	19	True	AATAAA	-30	NA	79974162	80051465	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178601	chr9	+	5545	32	NIC	ENSMUSG00000033577.19	novel	7871	33	NA	NA	-33	795	combination_of_known_junctions	FALSE	canonical	3	51	junction_13	8.67484072490656	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTTGATTGGTGTCTT	4821	False	NA	23	True	AATAAA	-26	NA	80072279	80216679	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_80072512_80124897_80125040_80128299_80128370_80133473_80133548_80136139_80136270_80149446_80149553_80152416_80152473_80152921_80153020_80153676_80153842_80159048_80159130_80162161_80162343_80165694_80165840_80168060_80168219_80169555_80169648_80171473_80171547_80173407_80173536_80176908_80177005_80177275_80177450_80181204_80181244_80183589_80183684_80188742_80188874_80188964_80189043_80190736_80190867_80193012_80193104_80193563_80193715_80195289_80195499_80197147_80197227_80199638_80199800_80206427_80206532_80207816_80207949_80214241_80214461_80214953
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178616	chr9	+	1155	1	FSM	ENSMUSG00000079225.4	ENSMUST00000183511.2	775	1	-75	-305	-61	14	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTTCAAGGACTGAGTC	NA	False	NA	NA	False	NA	NA	NA	81559589	81560744	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_81559600_81560700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178644	chr9	-	4091	8	NIC	ENSMUSG00000032258.16	novel	4160	8	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_7	6.67618368317024	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGATCCTTTATTTGAAT	NA	False	NA	-5	True	AATAAA	-14	NA	83323143	83275471	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_83278109_83280564_83280695_83281678_83281822_83282655_83282750_83283664_83283803_83305075_83305606_83308645_83309015_83323093
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178665	chr9	+	202	1	Intergenic	novelGene_5491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCAAGAATCTTGATTAT	NA	False	NA	NA	False	NA	NA	NA	83615170	83615372	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_83615200_83615400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178694	chr9	+	1501	11	FSM	ENSMUSG00000032263.15	ENSMUST00000190637.7	1477	11	-21	-3	-21	2	multi-exon	FALSE	canonical	3	595	junction_3	45.3898667105335	326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGTGTGTCCTCTTCT	NA	False	NA	NA	False	AATAAA	-22	NA	83807176	84006295	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_83807413_83834576_83834655_83835765_83835835_83870828_83870963_83871193_83871350_83873766_83873876_83892306_83892405_83894561_83894673_83951157_83951245_84004286_84004436_84006021
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178702	chr9	+	187	1	Intergenic	novelGene_5492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATCTGTTTATATACATT	NA	False	NA	NA	False	NA	NA	NA	83883530	83883717	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_83883500_83883700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178709	chr9	+	889	1	FSM	ENSMUSG00000099927.2	ENSMUST00000190511.2	798	1	-27	-64	-27	64	mono-exon	FALSE	NA	NA	NA	NA	NA	419	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACACATCCTTGGGTGGA	NA	False	NA	NA	False	CATAAA	-35	NA	84306009	84306898	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_84306000_84306900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178722	chr9	-	5654	29	FSM	ENSMUSG00000035941.16	ENSMUST00000039213.15	5650	29	0	-4	0	4	multi-exon	FALSE	canonical	3	145	junction_19	26.8952047922362	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAGCGTGTGTTTGATTT	NA	False	NA	-3	True	AATAAA	-20	NA	85631387	85569408	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604506_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178737	chr9	+	228	1	Intergenic	novelGene_5493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	298	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCATCTGTATCATACCCT	NA	False	NA	NA	False	NA	NA	NA	85628387	85628615	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_85628400_85628600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178757	chr9	+	2478	2	FSM	ENSMUSG00000035274.14	ENSMUST00000185559.2	409	2	-5	-2064	-5	-1051	multi-exon	FALSE	canonical	3	15	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATGTTGTGTTTAACTT	NA	False	NA	1	True	AATAAA	-14	NA	85725408	85728042	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_85725548_85725703
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178763	chr9	-	2692	13	FSM	ENSMUSG00000056131.14	ENSMUST00000070064.11	2666	13	-29	3	-14	-3	multi-exon	FALSE	canonical	3	372	junction_7	43.7311070317483	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCAGCAGTGTGTTTTA	NA	False	NA	NA	False	AAAAAG	-9	NA	86453909	86436432	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86453782
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178782	chr9	-	3291	14	FSM	ENSMUSG00000032418.16	ENSMUST00000034989.15	3288	14	1	-4	1	4	multi-exon	TRUE	canonical	3	250	junction_5	30.9913139195733	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATGTCATTTTTTTCTT	9611	False	NA	NA	False	ATTAAA	-24	NA	86578005	86463419	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178820	chr9	-	3106	28	FSM	ENSMUSG00000032422.19	ENSMUST00000165315.9	3109	28	3	0	3	0	multi-exon	TRUE	canonical	3	141	junction_13	28.9754164757839	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTGTATTTACTGTCT	NA	False	NA	-2	True	AATAAA	-40	NA	88321001	88258802	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88295533_88295622_88297724_88297769_88302303_88302383_88302801_88302879_88304950_88305072_88320720
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178834	chr9	+	576	1	FSM	ENSMUSG00000066443.6	ENSMUST00000155008.2	481	1	-35	-60	-35	60	mono-exon	FALSE	NA	NA	NA	NA	NA	1245	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTATAAGCTACACTGT	NA	False	NA	NA	False	NA	NA	NA	88272854	88273430	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_88272900_88273400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178875	chr9	-	675	5	NIC	ENSMUSG00000097195.11	novel	826	6	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	461	junction_1	309.579553588411	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTCAATTCTTTTTGT	NA	False	NA	-8	True	AATAAA	-39	NA	88404944	88403103	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_88403502_88403970_88404029_88404359_88404435_88404536_88404640_88404903
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178880	chr9	-	938	4	NIC	ENSMUSG00000097195.11	novel	809	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	461	junction_1	319.66545011934	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404944	88403104	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_88403502_88403970_88404029_88404359_88404435_88404536
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178883	chr9	-	1005	5	FSM	ENSMUSG00000097195.11	ENSMUST00000239369.2	1678	5	671	2	0	0	multi-exon	FALSE	canonical	3	405	junction_2	300.420122495148	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404944	88403104	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_88403502_88403702_88403770_88403970_88404029_88404359_88404435_88404536
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178884	chr9	-	1269	3	NIC	ENSMUSG00000097195.11	novel	1408	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	461	junction_1	364.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404944	88403104	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_88403502_88403970_88404435_88404536
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178895	chr9	-	783	6	FSM	ENSMUSG00000097195.11	ENSMUST00000239365.2	809	6	26	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	430.698688180032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404944	88403104	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_88403502_88403702_88403770_88403970_88404029_88404359_88404435_88404536_88404682_88404903
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178896	chr9	-	741	6	FSM	ENSMUSG00000097195.11	ENSMUST00000182232.9	826	6	83	2	0	0	multi-exon	FALSE	canonical	3	405	junction_2	292.278634183205	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404944	88403104	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_88403502_88403702_88403770_88403970_88404029_88404359_88404435_88404536_88404640_88404903
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178917	chr9	+	191	1	Intergenic	novelGene_5494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAATTTGCCGGGCGTTG	NA	False	NA	NA	False	NA	NA	NA	88437406	88437597	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_88437400_88437600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178921	chr9	+	188	1	Intergenic	novelGene_5495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATAAAAGTTTGCCGGG	NA	False	NA	NA	False	NA	NA	NA	88453530	88453718	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_88453500_88453700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178924	chr9	-	172	1	Intergenic	novelGene_5496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAGTAAATGTT	8883	False	NA	NA	False	NA	NA	NA	88471400	88471228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_88471200_88471400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178934	chr9	-	789	3	FSM	ENSMUSG00000079427.11	ENSMUST00000113110.5	801	3	9	3	9	1	multi-exon	TRUE	canonical	3	319	junction_2	104	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAGAAATCAATAGAAATT	NA	False	NA	NA	False	AATAAA	-17	NA	88601857	88570657	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_88571039_88597540_88597803_88601711
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178946	chr9	+	193	1	Intergenic	novelGene_5497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATATATATATGTATATA	NA	False	NA	NA	False	NA	NA	NA	88937277	88937470	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_88937300_88937500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178952	chr9	+	784	3	FSM	ENSMUSG00000066442.18	ENSMUST00000085256.8	816	3	14	18	14	-4	multi-exon	TRUE	canonical	3	175	junction_1	109	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAGAAATCAATAGAAATT	NA	False	NA	NA	False	AATAAA	-17	NA	89093223	89122275	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_89093365_89097261_89097524_89121894
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178966	chr9	-	1795	12	FSM	ENSMUSG00000062270.15	ENSMUST00000169860.8	1824	12	29	0	-1	0	multi-exon	FALSE	canonical	3	3415	junction_7	1167.30044572017	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGGCCGTGTTATCAA	NA	False	NA	NA	False	AATAAA	-24	NA	89996798	89973717	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178978	chr9	-	1811	13	NIC	ENSMUSG00000062270.15	novel	1882	13	NA	NA	8	2	combination_of_known_junctions	FALSE	canonical	3	67	junction_10	2451.75327855168	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTGTGTGGCCGTGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	89996704	89973721	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89985707_89985822_89989287_89989356_89992178_89992226_89996588
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178982	chr9	-	1582	10	NIC	ENSMUSG00000062270.15	novel	1824	12	NA	NA	8	2	combination_of_known_junctions	FALSE	canonical	3	30	junction_9	2189.3605357628	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTGTGTGGCCGTGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	89996704	89973721	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89996588
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178996	chr9	+	191	1	Intergenic	novelGene_5498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTCATTATGAGGACTGA	NA	False	NA	NA	False	NA	NA	NA	89998894	89999085	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_89998900_89999100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000178997	chr9	+	2235	1	FSM	ENSMUSG00000096647.3	ENSMUST00000178436.3	871	1	-55	-1309	-55	1309	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTATTTTCATTTATACG	NA	False	NA	NA	False	AATACA	-25	NA	90000934	90003169	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_90000900_90003200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179021	chr9	+	188	1	Intergenic	novelGene_5499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAGTCAGGCTGCATCAC	NA	False	NA	NA	False	NA	NA	NA	90100027	90100215	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_90100000_90100200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179030	chr9	+	212	1	Intergenic	novelGene_5500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGATACAAGGTGATGAA	NA	False	NA	NA	False	NA	NA	NA	91221733	91221945	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_91221700_91221900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179037	chr9	+	1573	9	FSM	ENSMUSG00000032369.14	ENSMUST00000093801.10	2302	9	432	297	-160	4	multi-exon	FALSE	canonical	1	104	junction_4	78.1135991681346	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGATGTTACTTTACAA	NA	False	NA	NA	False	NA	NA	NA	92132234	92154034	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_92132414_92140100_92140128_92141326_92141408_92145085_92145331_92146698_92146742_92148443_92148665_92148764_92148927_92151867_92152030_92153581
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179048	chr9	+	3650	19	FSM	ENSMUSG00000032374.15	ENSMUST00000070522.14	3649	19	-1	0	-1	0	multi-exon	TRUE	canonical	3	58	junction_10	9.44264688775947	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGCCTCTCTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	92424274	92490481	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_92424622_92453307_92453400_92455523_92455661_92463254_92463419_92466543_92466657_92468891_92468956_92470653_92470752_92473352_92473455_92475797_92475924_92477314_92477437_92478388_92478494_92480640_92480767_92482793_92482936_92485000_92485115_92486831_92486898_92487425_92487531_92488560_92488708_92488816_92488943_92489127
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179059	chr9	-	4199	3	FSM	ENSMUSG00000045414.8	ENSMUST00000113028.2	3950	3	-249	0	-249	0	multi-exon	FALSE	canonical	3	138	junction_2	1.5	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGCTACTCTGTCTTCA	NA	False	NA	-1	True	AATAAA	-20	NA	94420383	94399916	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_94402700_94406444_94406749_94419271
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179067	chr9	-	3112	2	FSM	ENSMUSG00000033350.8	ENSMUST00000036267.8	7328	2	-589	4805	-589	-4805	multi-exon	FALSE	canonical	3	17	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTTATATTTGATTCC	NA	False	NA	-15	True	AATAAA	-18	NA	95289364	95286149	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_95288527_95288629
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179071	chr9	-	7640	28	FSM	ENSMUSG00000032407.15	ENSMUST00000217176.2	3111	28	-18	-4511	-9	4	multi-exon	TRUE	canonical	0	0	junction_13	167.860448931548	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTGCTCTGTGGTCT	8284	False	NA	1	True	ATTAAA	-21	NA	95393956	95338946	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179103	chr9	-	3407	27	NIC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	203.484137904403	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTTGTTTTTTTGCCCA	8302	False	NA	0	True	AATAAA	-18	NA	95393938	95343029	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95384592_95384638_95393869
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179122	chr9	+	1871	9	FSM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	21	2546	21	867	multi-exon	FALSE	canonical	3	281	junction_3	14.5982661641717	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGCAGCCAGATAACCTT	8396	False	NA	NA	False	AATAAA	-17	NA	95519674	95577603	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_95519927_95520704_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179134	chr9	-	3697	16	FSM	ENSMUSG00000049493.14	ENSMUST00000093800.9	3704	16	7	0	7	0	multi-exon	FALSE	canonical	3	26	junction_4	11.5231168623	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTATTTCATTTAA	NA	False	NA	2	True	AATAAA	-19	NA	95727332	95634694	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_95636491_95636713_95636839_95643365_95643490_95643986_95644121_95647743_95647859_95651146_95651226_95655570_95655767_95657360_95657457_95658518_95658662_95658741_95658908_95664422_95664505_95666152_95666286_95667542_95667673_95668985_95669150_95677814_95677920_95727223
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179142	chr9	+	185	1	Intergenic	novelGene_5501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACTTTACAAGAGCCTGG	NA	False	NA	NA	False	NA	NA	NA	95729622	95729807	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_95729600_95729800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179149	chr9	+	7993	47	FSM	ENSMUSG00000032409.16	ENSMUST00000034980.9	8056	47	65	-2	-7	2	multi-exon	TRUE	canonical	3	80	junction_14	23.1390654868948	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAGTAATCTGAAATCCA	NA	False	NA	11	True	AATAAA	-17	NA	95739714	95833699	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747899_95748635_95748815_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179154	chr9	+	3492	27	ISM	ENSMUSG00000032410.14	ENSMUST00000034981.14	5499	42	33	41156	0	6	5prime_fragment	FALSE	canonical	3	35	junction_24	7.47273149365955	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAATTTCTTTCTTTGT	NA	False	NA	NA	False	AATATA	-41	NA	95836845	95893924	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179163	chr9	-	226	1	Intergenic	novelGene_5502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGGCCCTACAGTTTAAA	NA	False	NA	NA	False	AAAAAG	-21	NA	95896666	95896440	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_95896400_95896700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179172	chr9	+	188	1	Intergenic	novelGene_5503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGGCAGGGTGTGGGTT	NA	False	NA	NA	False	NA	NA	NA	96069531	96069719	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_96069500_96069700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179176	chr9	+	189	1	Intergenic	novelGene_5504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTGAAATTGGTCTACT	NA	False	NA	NA	False	NA	NA	NA	96073063	96073252	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_96073100_96073300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179214	chr9	+	175	1	Intergenic	novelGene_5505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTCCTAATAATGCAGGC	NA	False	NA	NA	False	NA	NA	NA	96178601	96178776	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_96178600_96178800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179235	chr9	-	1244	3	FSM	ENSMUSG00000051234.7	ENSMUST00000057500.6	1232	3	-12	0	-12	0	multi-exon	FALSE	canonical	3	1085	junction_1	10	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTCTTTATTTGGCGGT	3701	False	NA	0	True	ATTAAA	-35	NA	96360740	96352989	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_96353906_96356010_96356059_96360460
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179252	chr9	+	204	1	Intergenic	novelGene_5506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGCCACCATGCATGG	527	False	NA	NA	False	NA	NA	NA	96392842	96393046	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_96392800_96393000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179259	chr9	-	5732	24	FSM	ENSMUSG00000032413.13	ENSMUST00000034984.8	5813	24	81	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	16.7988207345585	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTTTGTGAGACCTT	NA	False	NA	NA	False	AATAAA	-15	NA	96513589	96421352	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_96424529_96426331_96426519_96426840_96426945_96427641_96427851_96428299_96428383_96434355_96434463_96435165_96435240_96439452_96439531_96442750_96442835_96448068_96448176_96450416_96450541_96451072_96451148_96451743_96451859_96452718_96452868_96453917_96454075_96458338_96458441_96459525_96459603_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513416
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179269	chr9	+	762	1	FSM	ENSMUSG00000062933.8	ENSMUST00000075723.7	490	1	-45	-227	-45	227	mono-exon	FALSE	NA	NA	NA	NA	NA	3685	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACCTGACACAAACACCAC	NA	False	NA	NA	False	NA	NA	NA	96777665	96778427	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_96777700_96778400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179281	chr9	-	182	1	Intergenic	novelGene_5507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTCCTTTCTAAGATGT	NA	False	NA	NA	False	NA	NA	NA	96914862	96914680	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_96914700_96914900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179294	chr9	-	5323	8	NNC	ENSMUSG00000032449.14	novel	5227	7	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	212	junction_4	351.164593073635	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCTCTTGTTTCCACCT	NA	False	NA	0	True	NA	NA	NA	96993203	96957013	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96975129_96975231_96979155_96979234_96982127_96982293_96992963
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179317	chr9	-	4675	8	FSM	ENSMUSG00000032449.14	ENSMUST00000153070.8	1203	8	-122	-3350	28	-2	multi-exon	FALSE	canonical	3	41	junction_3	473.47189214679	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTAAGATTTTATAATG	NA	False	NA	-6	True	ATTAAA	-35	NA	96993182	96957619	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_96961293_96962245_96962536_96967109_96967177_96972145_96972228_96975129_96975231_96979155_96979234_96982127_96982293_96992963
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179344	chr9	-	179	1	Intergenic	novelGene_5508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGATGCAGTATCA	3418	False	NA	NA	False	NA	NA	NA	96963182	96963003	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_96963000_96963200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179349	chr9	+	213	1	Intergenic	novelGene_5509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATTTTGAGTTGAGATT	NA	False	NA	NA	False	NA	NA	NA	98255686	98255899	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_98255700_98255900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179353	chr9	+	719	4	FSM	ENSMUSG00000046402.11	ENSMUST00000052068.11	2652	4	1909	24	1909	-24	multi-exon	FALSE	canonical	3	98	junction_1	8.01387685344754	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGTGTTTTGGAGGAAT	4794	False	NA	17	True	AATAAA	-18	NA	98306922	98328604	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_98307105_98307505_98307685_98326642_98326745_98328348
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179358	chr9	+	188	1	Intergenic	novelGene_5510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACCTAGCAGAAGTTGA	NA	False	NA	NA	False	NA	NA	NA	98326050	98326238	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_98326000_98326200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179363	chr9	-	209	1	Intergenic	novelGene_5511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTAAAGATATATAGCATT	NA	False	NA	NA	False	TTTAAA	-4	NA	98438533	98438324	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_98438300_98438500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179372	chr9	+	3087	22	FSM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	-35	-2	-25	2	multi-exon	TRUE	canonical	3	669	junction_10	53.4673910412871	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGAGTTTCCTTCCTAG	NA	False	NA	21	True	CATAAA	-22	NA	98445748	98470437	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_98445877_98450045_98450184_98452358_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179381	chr9	-	3615	7	NIC	ENSMUSG00000032459.10	novel	1197	8	NA	NA	-7	0	intron_retention	FALSE	canonical	3	515	junction_4	22.0661883130428	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCTGTAATTCGTTTTT	NA	False	NA	-9	True	ATTAAA	-20	NA	98483720	98470782	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_98470980_98472087_98474754_98476125_98476210_98476722_98476867_98478872_98479038_98480187_98480352_98483525
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179382	chr9	-	1206	8	FSM	ENSMUSG00000032459.10	ENSMUST00000035034.10	1197	8	-9	0	-9	0	multi-exon	FALSE	canonical	3	442	junction_2	42.1929484387994	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCTGTAATTCGTTTTT	NA	False	NA	-9	True	ATTAAA	-20	NA	98483722	98470782	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_98470980_98472087_98472197_98474607_98474754_98476125_98476210_98476722_98476867_98478872_98479038_98480187_98480352_98483525
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179401	chr9	+	179	1	Intergenic	novelGene_5512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGACCAAATATT	NA	False	NA	NA	False	NA	NA	NA	98826156	98826335	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_98826200_98826300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179408	chr9	+	1021	5	FSM	ENSMUSG00000032463.11	ENSMUST00000035038.8	1019	5	0	-2	0	2	multi-exon	FALSE	canonical	3	266	junction_2	16.8430252627015	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGGTTTGGTTTCATGTG	3544	False	NA	11	True	AATAAA	-25	NA	98868425	98884076	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_98868566_98874153_98874287_98874565_98874795_98881019_98881070_98883607
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179418	chr9	-	4861	24	FSM	ENSMUSG00000032462.15	ENSMUST00000035037.14	6478	24	-128	1745	-128	2	multi-exon	FALSE	canonical	3	157	junction_2	24.902380296338	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTGTCTTCTTTTTGG	NA	False	NA	1	True	AATAAA	-27	NA	99022268	98920451	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179429	chr9	+	425	1	Intergenic	novelGene_5513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATCCTTCTTTCCTTAAA	NA	False	NA	NA	False	NA	NA	NA	99052653	99053078	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_99052700_99053100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179441	chr9	+	2617	18	FSM	ENSMUSG00000056267.15	ENSMUST00000093795.10	2606	18	-11	0	-11	0	multi-exon	TRUE	canonical	3	165	junction_10	72.0150887688172	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTGTCCCTAGTGACT	NA	False	NA	18	True	AATAAA	-23	NA	99125483	99182457	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179474	chr9	-	179	1	Intergenic	novelGene_5514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCTATATGAAGCCAATA	1062	False	NA	NA	False	NA	NA	NA	99157390	99157211	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_99157200_99157400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179486	chr9	-	4050	6	FSM	ENSMUSG00000032470.18	ENSMUST00000035045.15	4701	6	651	0	196	0	multi-exon	FALSE	canonical	3	447	junction_5	30.9644957976067	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCTTATTTCCTCTTC	3890	False	NA	-4	True	NA	NA	NA	99318783	99267472	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99318362
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179541	chr9	-	177	1	Intergenic	novelGene_5515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAACTAGTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	99476374	99476197	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_99476200_99476400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179543	chr9	+	206	1	Intergenic	novelGene_5516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGGCCAGGACTACACAAA	623	False	NA	NA	False	NA	NA	NA	99576425	99576631	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_99576400_99576600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179559	chr9	+	200	1	Intergenic	novelGene_5517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTAGTTGCTAGGGGAT	NA	False	NA	NA	False	NA	NA	NA	100411384	100411584	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_100411400_100411600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179570	chr9	+	6100	34	FSM	ENSMUSG00000037286.16	ENSMUST00000129269.8	6186	34	85	1	-67	0	multi-exon	FALSE	canonical	3	316	junction_9	35.0771941586826	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGGTTATCCTGTTG	NA	False	NA	14	True	AATAAA	-14	NA	100525585	100840597	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179590	chr9	+	185	1	Intergenic	novelGene_5518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAGCAGTTATACAGACC	NA	False	NA	NA	False	NA	NA	NA	100829540	100829725	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_100829500_100829700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179602	chr9	-	2306	15	FSM	ENSMUSG00000032527.14	ENSMUST00000035116.12	2320	15	14	0	-3	0	multi-exon	FALSE	canonical	3	67	junction_12	14.4016722385043	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTGTTGTTTTTTTAT	NA	False	NA	0	True	NA	NA	NA	100916937	100864084	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_100864860_100866425_100866526_100867180_100867280_100867583_100867685_100867831_100867940_100869833_100869958_100876620_100876703_100877612_100877734_100881217_100881327_100894757_100894869_100905188_100905303_100909132_100909190_100912227_100912297_100913908_100914029_100916721
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179609	chr9	-	173	1	Intergenic	novelGene_5519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTTAAAAAAAATGAGCCG	NA	False	NA	NA	False	NA	NA	NA	100929545	100929372	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_100929400_100929500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179615	chr9	+	192	1	Intergenic	novelGene_5520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATATATTAAACTGGAT	NA	False	NA	NA	False	NA	NA	NA	100972154	100972346	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_100972200_100972300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179622	chr9	+	201	1	Intergenic	novelGene_5521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGCAATTTTTGCAACAA	NA	False	NA	NA	False	NA	NA	NA	102073572	102073773	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_102073600_102073800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179632	chr9	-	2097	13	FSM	ENSMUSG00000032534.19	ENSMUST00000162655.9	4180	13	-15	2098	-15	1	multi-exon	FALSE	canonical	3	75	junction_12	13.3260396717604	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACATGAATGTTTATTAC	NA	False	NA	-9	True	AATAAA	-18	NA	102503748	102463884	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_102464212_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102490493_102490617_102492473_102492570_102496009_102496188_102496890_102496960_102503461
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179650	chr9	+	200	1	Intergenic	novelGene_5522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCTCCAGGTTTAAACTA	NA	False	NA	NA	False	NA	NA	NA	102517697	102517897	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_102517700_102517900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179662	chr9	+	4238	10	FSM	ENSMUSG00000032531.16	ENSMUST00000035121.14	4328	10	90	0	90	0	multi-exon	FALSE	canonical	3	168	junction_1	19.0852538254079	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGTCTGTCTATT	NA	False	NA	17	True	AATAAA	-20	NA	102594956	102610617	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_102595102_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179673	chr9	+	4143	10	NIC	ENSMUSG00000032531.16	novel	3475	10	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	65.1808500241946	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTGTCTGTCTGTCTA	NA	False	NA	15	True	AATAAA	-18	NA	102595677	102610615	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_102595730_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179682	chr9	+	179	1	Intergenic	novelGene_5523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCTCTTTCTAAGAAT	NA	False	NA	NA	False	NA	NA	NA	102675230	102675409	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_102675200_102675400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179688	chr9	+	190	1	Intergenic	novelGene_5524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACAACAAAATGATCTTAA	NA	False	NA	NA	False	NA	NA	NA	102677026	102677216	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_102677000_102677200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179696	chr9	-	161	1	Intergenic	novelGene_5525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCAGAGCAAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	102686867	102686706	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_102686700_102686900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179701	chr9	+	2952	15	FSM	ENSMUSG00000032547.13	ENSMUST00000035142.8	2852	15	-102	2	-47	-2	multi-exon	TRUE	canonical	3	312	junction_7	39.7877019252155	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCTCACAGTGTGTGAC	NA	False	NA	50	True	ATTAAA	-30	NA	102712068	102785150	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_102712439_102739072_102739195_102744753_102744854_102746472_102746608_102748926_102748981_102752937_102753083_102758852_102758954_102763201_102763328_102765668_102765756_102768414_102768485_102774400_102774534_102775657_102775768_102775889_102776050_102783235_102783373_102784048
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179709	chr9	+	146	1	Intergenic	novelGene_5526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	557	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCATGCTTGAGTGAAC	5750	False	NA	NA	False	NA	NA	NA	102905956	102906102	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_102906000_102906100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179718	chr9	-	190	1	Intergenic	novelGene_5527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTGTCAGCTCCTATAA	NA	False	NA	NA	False	NA	NA	NA	102983123	102982933	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_102982900_102983100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179723	chr9	-	1855	8	NNC	ENSMUSG00000032553.15	novel	3064	7	NA	NA	0	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	97.1596624119289	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTGAGTCAAATGATGAG	NA	False	NA	3	True	TATAAA	-34	NA	103079328	103066285	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_-_103066696_103066841_103067621_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179742	chr9	+	5285	28	FSM	ENSMUSG00000032555.11	ENSMUST00000035164.10	5224	28	-56	-5	-56	5	multi-exon	FALSE	canonical	3	379	junction_13	76.5309229485215	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTGTTCATTTAGATC	897	False	NA	19	True	AATAAA	-24	NA	103182357	103227632	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179762	chr9	+	5067	27	NIC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_17	132.54375184763	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	963	False	NA	14	True	AATAAA	-19	NA	103182423	103227627	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179790	chr9	-	3932	5	FSM	ENSMUSG00000032803.16	ENSMUST00000072249.13	3787	5	-139	-6	-58	2	multi-exon	FALSE	canonical	3	423	junction_1	33.7740654941036	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGAATGTGATGCTTTC	NA	False	NA	-6	True	AATAAA	-16	NA	103242876	103230300	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_103233229_103233478_103233639_103237074_103237218_103241173_103241251_103242252
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179804	chr9	-	3913	5	FSM	ENSMUSG00000032803.16	ENSMUST00000189875.8	554	5	-539	-2820	-47	0	multi-exon	TRUE	canonical	3	42	junction_2	179.509052696514	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTGGAATGTGATGCTT	NA	False	NA	-8	True	AATAAA	-14	NA	103242865	103230302	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_103233229_103233478_103233633_103237074_103237218_103241173_103241251_103242252
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179813	chr9	-	189	1	Intergenic	novelGene_5528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTTTTAAAAAAAACCAGC	2988	False	NA	NA	False	NA	NA	NA	103486374	103486185	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_103486200_103486400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179849	chr9	-	178	1	Intergenic	novelGene_5529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTTGAAAGAGTTTGTT	9801	False	NA	NA	False	NA	NA	NA	104093207	104093029	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_104093000_104093200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179857	chr9	-	176	1	Intergenic	novelGene_5530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAAGACAGCTACAGTG	NA	False	NA	NA	False	NA	NA	NA	104709656	104709480	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_104709500_104709700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179873	chr9	+	2494	5	FSM	ENSMUSG00000032567.17	ENSMUST00000035181.10	2755	5	-30	291	-30	0	multi-exon	FALSE	canonical	3	44	junction_3	8.45576726264388	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTATTTATTTATATG	NA	False	NA	NA	False	AATACA	-16	NA	105272560	105282666	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_105272865_105273743_105275058_105278674_105278886_105280594_105280791_105282197
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179882	chr9	+	2682	5	NIC	ENSMUSG00000032567.17	novel	2349	6	NA	NA	-29	0	intron_retention	FALSE	canonical	3	19	junction_1	18.0138835346518	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTATTTATTTATATG	NA	False	NA	NA	False	AATACA	-16	NA	105272561	105282666	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_105273054_105273743_105275058_105278674_105278886_105280594_105280791_105282197
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179889	chr9	-	4733	28	FSM	ENSMUSG00000032570.18	ENSMUST00000112558.10	5642	28	-15	924	-4	1	multi-exon	FALSE	canonical	3	56	junction_27	76.7098107267147	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGACTTCCCAGTTAGT	NA	False	NA	-1	True	AATAAA	-21	NA	105372308	105288560	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371682_105372091
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179891	chr9	-	4930	28	FSM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	-58	4	-58	1	multi-exon	FALSE	canonical	3	363	junction_24	33.8350310750022	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGACTTCCCAGTTAGT	NA	False	NA	-1	True	AATAAA	-21	NA	105372390	105288560	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179929	chr9	+	200	1	Intergenic	novelGene_5531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATGCTAAATCTTGGGA	NA	False	NA	NA	False	NA	NA	NA	106045939	106046139	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_106045900_106046100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179945	chr9	+	3613	8	NIC	ENSMUSG00000020257.14	novel	3747	9	NA	NA	0	-33	combination_of_known_junctions	FALSE	canonical	3	45	junction_3	76.5447714792874	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCGTAAACAGGATTTT	NA	False	NA	21	True	TATAAA	-18	NA	106048127	106068305	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_106048579_106053811_106053910_106057764_106057832_106061378_106061496_106061881_106062038_106062447_106062518_106063568_106063712_106065794
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179957	chr9	+	192	1	Intergenic	novelGene_5532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCACATCAGGCCACCC	NA	False	NA	NA	False	NA	NA	NA	106070952	106071144	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_106071000_106071100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179962	chr9	-	1835	10	FSM	ENSMUSG00000020253.16	ENSMUST00000140761.9	1846	10	11	0	11	0	multi-exon	FALSE	canonical	3	106	junction_7	13.9682178931713	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTCTCTCTCTTTTA	3854	False	NA	-4	True	NA	NA	NA	106076463	106072149	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_106072670_106072985_106073138_106073248_106073357_106073566_106073631_106073791_106073911_106074002_106074088_106074425_106074539_106074940_106075196_106075299_106075424_106076168
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179970	chr9	+	1613	9	FSM	ENSMUSG00000023277.14	ENSMUST00000024047.12	1596	9	-15	-2	-15	2	multi-exon	FALSE	canonical	3	299	junction_8	33.0111250186963	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGCCTGGGTGCCTTTCC	NA	False	NA	21	True	AATAAA	-18	NA	106080291	106092590	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_106080484_106084087_106084166_106088917_106089097_106089454_106089551_106089930_106090036_106090136_106090263_106091299_106091451_106091554_106091677_106092026
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179980	chr9	+	1237	6	FSM	ENSMUSG00000023277.14	ENSMUST00000217523.2	819	6	-8	-410	-8	0	multi-exon	FALSE	canonical	3	299	junction_5	34.8906864363543	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGAGCCTGGGTGCCTTT	NA	False	NA	19	True	AATAAA	-16	NA	106089379	106092588	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_106089551_106089930_106090036_106090136_106090263_106091299_106091451_106091554_106091677_106092026
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179986	chr9	-	2224	11	FSM	ENSMUSG00000032786.17	ENSMUST00000141118.9	3399	11	720	455	-64	14	multi-exon	TRUE	canonical	3	139	junction_7	18.0612845611822	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTTAGGTGTTTCTGC	8498	False	NA	0	True	AATAAA	-45	NA	106125133	106111111	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_106111397_106112586_106112750_106113638_106113908_106115273_106115439_106115841_106116022_106116730_106116916_106118314_106118538_106118834_106118985_106120360_106120595_106123957_106124178_106124983
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000179995	chr9	-	180	1	Intergenic	novelGene_5533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGAACATTGGGT	6045	False	NA	NA	False	NA	NA	NA	106121046	106120866	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_106120900_106121000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180006	chr9	+	197	1	Intergenic	novelGene_5534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	626	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGAGGCAGGAGGATTGC	NA	False	NA	NA	False	NA	NA	NA	106122849	106123046	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_106122800_106123000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180022	chr9	+	3292	3	FSM	ENSMUSG00000053716.10	ENSMUST00000172306.3	3213	3	-79	0	-79	0	multi-exon	FALSE	canonical	3	135	junction_1	12	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTCCTGGTGTTCAATA	NA	False	NA	38	True	AATAAA	-19	NA	106245751	106252923	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_106246523_106247899_106248335_106250837
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180032	chr9	+	781	4	FSM	ENSMUSG00000048758.15	ENSMUST00000150576.8	733	4	-48	0	-48	0	multi-exon	FALSE	canonical	3	2142	junction_1	1217.38161642108	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTCTGTTGTCATAG	NA	False	NA	3	True	AATAAA	-19	NA	106306604	106308767	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_106306776_106307168_106307214_106307506_106307572_106308267
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180054	chr9	-	1449	15	NIC	ENSMUSG00000023262.14	novel	1529	15	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	284	junction_14	59.3909565025326	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTTAATACTGTGGACA	NA	False	NA	-16	True	AATAAA	-18	NA	106315451	106310188	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106313894_106314000_106314087_106314153_106314827_106314933_106315331
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180087	chr9	+	2062	13	FSM	ENSMUSG00000023495.14	ENSMUST00000024260.14	2035	13	-27	0	-27	0	multi-exon	FALSE	canonical	3	316	junction_11	32.902212016148	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGCAGTAATACTAGTG	1573	False	NA	27	True	AATAAA	-20	NA	106331013	106341211	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_106331207_106337203_106337349_106337474_106337499_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340329
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180097	chr9	+	1838	13	NIC	ENSMUSG00000023495.14	novel	2035	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_12	99.8749217771909	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGCAGTAATACTAGTG	1600	False	NA	27	True	AATAAA	-20	NA	106331040	106341211	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_106331207_106337203_106337349_106337474_106337499_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340526
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180100	chr9	+	188	1	Intergenic	novelGene_5535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAGGCTCAGTATGTAGC	NA	False	NA	NA	False	NA	NA	NA	106343738	106343926	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_106343700_106343900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180109	chr9	+	1643	15	FSM	ENSMUSG00000041506.16	ENSMUST00000047721.10	1586	15	-57	0	-57	0	multi-exon	FALSE	canonical	3	1203	junction_11	74.9465115388084	752	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTGTTCCTCTGGTTT	NA	False	NA	23	True	ATTAAA	-23	NA	106354410	106362623	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180125	chr9	-	1430	6	FSM	ENSMUSG00000040813.17	ENSMUST00000046735.11	1391	6	-33	-6	-21	0	multi-exon	FALSE	canonical	3	285	junction_5	67.9187750183997	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTTGGTTTTTGTCTG	7847	False	NA	0	True	AATAAA	-28	NA	106563147	106535944	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106563033
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180127	chr9	-	1999	6	FSM	ENSMUSG00000040813.17	ENSMUST00000163441.8	1896	6	-103	0	1	0	multi-exon	TRUE	canonical	3	46	junction_5	161.744242555956	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTTGGTTTTTGTCTG	7869	False	NA	0	True	AATAAA	-28	NA	106563125	106535944	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106562442
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180128	chr9	-	1613	6	FSM	ENSMUSG00000040813.17	ENSMUST00000169068.8	1364	6	-249	0	-4	0	multi-exon	FALSE	canonical	3	151	junction_5	120.179865202121	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTTGGTTTTTGTCTG	7864	False	NA	0	True	AATAAA	-28	NA	106563130	106535944	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106562833
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180156	chr9	+	5675	24	NIC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	62	-7	combination_of_known_junctions	FALSE	canonical	3	78	junction_23	71.1541365847348	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCCTTTCCTTGTTTTC	NA	False	NA	9	True	AATAAA	-20	NA	106699134	106758184	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757135
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180173	chr9	-	187	1	Intergenic	novelGene_5536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTTCAAAATGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	106719408	106719221	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_106719200_106719400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180200	chr9	+	197	1	Intergenic	novelGene_5537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATTACAGGAAAACACAAC	NA	False	NA	NA	False	NA	NA	NA	107075378	107075575	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_107075400_107075600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180220	chr9	-	1586	11	FSM	ENSMUSG00000032579.15	ENSMUST00000035196.14	2192	11	0	606	0	2	multi-exon	FALSE	canonical	3	133	junction_9	21.6296093353532	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTATTAACATTCATG	NA	False	NA	-10	True	AATAAA	-14	NA	107215549	107204888	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107214199_107214578_107215479
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180249	chr9	+	1451	11	FSM	ENSMUSG00000010057.9	ENSMUST00000010201.9	1441	11	-10	0	-10	0	multi-exon	FALSE	canonical	3	98	junction_4	11.6721891691319	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGAGTACTGCTTCAGCC	NA	False	NA	13	True	AATAAA	-24	NA	107419414	107422905	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_107419653_107420180_107420273_107420366_107420536_107420705_107420815_107421349_107421487_107421578_107421677_107421796_107421834_107421945_107422040_107422112_107422231_107422443_107422587_107422689
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180271	chr9	+	1665	3	FSM	ENSMUSG00000010054.5	ENSMUST00000010198.5	1665	3	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_1	4.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGAGTGGCGTCCAGTG	NA	False	NA	20	True	AATAAA	-21	NA	107440453	107443311	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_107440732_107441774_107441896_107442045
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180276	chr9	+	1905	4	FSM	ENSMUSG00000010047.13	ENSMUST00000010191.13	1893	4	-9	-3	-9	0	multi-exon	FALSE	canonical	3	208	junction_3	7.31816613336672	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGTCTTTTTCTGCTTC	NA	False	NA	18	True	ATTAAA	-20	NA	107446306	107449978	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_107446433_107447302_107448270_107448690_107448781_107449256
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180297	chr9	+	2056	12	FSM	ENSMUSG00000010048.11	ENSMUST00000010192.11	2056	12	11	-11	11	11	multi-exon	TRUE	canonical	3	631	junction_11	35.5716016363504	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGAGTCTTGCCTTCCCT	NA	False	NA	32	True	ATTAAA	-44	NA	107464851	107470248	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180317	chr9	-	1855	9	FSM	ENSMUSG00000032562.14	ENSMUST00000192615.6	1777	9	-78	0	-23	0	multi-exon	FALSE	canonical	3	246	junction_1	364.681860496241	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTGTTCTTTTCTCCT	4747	False	NA	0	True	AATAAA	-24	NA	107512589	107491323	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_107491915_107492810_107493025_107493353_107493508_107493612_107493743_107494133_107494263_107496895_107497057_107497245_107497388_107497618_107497662_107512298
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180328	chr9	-	2272	9	FSM	ENSMUSG00000032562.14	ENSMUST00000055704.12	2215	9	-57	0	-57	0	multi-exon	FALSE	canonical	3	1026	junction_1	123.439193026364	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTGTTCTTTTCTCCT	4713	False	NA	0	True	AATAAA	-24	NA	107512623	107491323	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_107492298_107492810_107493025_107493353_107493508_107493612_107493743_107494133_107494263_107496895_107497057_107497245_107497388_107497618_107497662_107512298
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180347	chr9	+	181	1	Intergenic	novelGene_5538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTTAAAAAAAAAGATTTG	1672	False	NA	NA	False	NA	NA	NA	107589549	107589730	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_107589500_107589700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180354	chr9	-	3089	25	FSM	ENSMUSG00000032580.13	ENSMUST00000182659.8	3205	25	-8	124	-8	0	multi-exon	FALSE	canonical	3	262	junction_19	112.690456068333	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTCTTTATTGAG	9697	False	NA	-1	True	AAGAAA	-17	NA	107648203	107617693	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180385	chr9	-	2171	17	NIC	ENSMUSG00000032582.15	novel	3716	21	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	80	junction_15	79.7133291473264	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTTGTTAAAGTTTTT	7545	False	NA	NA	False	AATAAA	-18	NA	107749988	107650761	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107737547_107737659_107749847
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180397	chr9	-	3985	21	FSM	ENSMUSG00000032582.15	ENSMUST00000035201.13	3999	21	10	4	2	0	multi-exon	FALSE	canonical	3	99	junction_19	75.7708882091269	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTTGTTAAAGTTTTT	7515	False	NA	NA	False	AATAAA	-18	NA	107750018	107650761	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730874_107737547_107737659_107749847
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180418	chr9	+	181	1	Intergenic	novelGene_5539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTTTTCAAAACACCAAAG	NA	False	NA	NA	False	NA	NA	NA	107672497	107672678	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_107672500_107672700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180421	chr9	-	192	1	Intergenic	novelGene_5540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTATTTTGTTGTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	107758295	107758103	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_107758100_107758300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180444	chr9	+	2703	15	FSM	ENSMUSG00000032586.10	ENSMUST00000049348.9	2706	15	3	0	3	0	multi-exon	TRUE	canonical	3	256	junction_7	39.1366001255571	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTTTGGCAGAGTATTT	NA	False	NA	4	True	NA	NA	NA	107828157	107849469	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180458	chr9	+	154	1	Intergenic	novelGene_5541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAAGTGCATAACTT	NA	False	NA	NA	False	AATAAA	-7	NA	107831746	107831900	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_107831700_107831900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180471	chr9	+	4442	6	FSM	ENSMUSG00000032594.12	ENSMUST00000035214.11	4559	6	122	-5	-6	5	multi-exon	FALSE	canonical	3	206	junction_5	50.8700304698159	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGTCTGTGTGAAAACT	6842	False	NA	22	True	AATAAA	-22	NA	107879821	107925986	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922100_107922661
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180482	chr9	+	4840	6	FSM	ENSMUSG00000032594.12	ENSMUST00000167159.9	2157	6	-10	-2673	-1	0	multi-exon	FALSE	canonical	3	91	junction_5	93.84540478894	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCCAAGTCTGTGTGA	6852	False	NA	17	True	AATAAA	-17	NA	107879831	107925981	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922513_107922661
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180483	chr9	+	4300	6	NIC	ENSMUSG00000032594.12	novel	4559	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_2	111.90781920849	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCCAAGTCTGTGTGA	6852	False	NA	17	True	AATAAA	-17	NA	107879831	107925981	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_107880022_107901301_107901523_107909197_107909409_107918103_107918286_107921923_107922100_107922661
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180486	chr9	+	4495	7	NIC	ENSMUSG00000032594.12	novel	4559	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_5	118.632134488651	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCCAAGTCTGTGTGA	6852	False	NA	17	True	AATAAA	-17	NA	107879831	107925981	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922100_107922444_107922513_107922661
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180505	chr9	+	1783	9	FSM	ENSMUSG00000070284.11	ENSMUST00000112295.9	2702	9	38	881	-9	4	multi-exon	FALSE	canonical	3	94	junction_7	12.9807549857472	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCCTTGTTGTTCATCA	NA	False	NA	14	True	NA	NA	NA	107926478	107929119	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180584	chr9	+	208	1	Intergenic	novelGene_5542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATCTGTGGCAATACATA	NA	False	NA	NA	False	AAAAAG	-3	NA	108129592	108129800	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_108129600_108129800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180591	chr9	+	207	1	Intergenic	novelGene_5543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGTCTTGAGTCCCCAA	NA	False	NA	NA	False	NA	NA	NA	108130411	108130618	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_108130400_108130600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180595	chr9	+	187	1	Intergenic	novelGene_5544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTTGGCTGCATGTGG	NA	False	NA	NA	False	NA	NA	NA	108132642	108132829	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_108132600_108132800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180602	chr9	+	247	1	Intergenic	novelGene_5545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTTTCCTTGTTTTT	NA	False	NA	NA	False	AAAAAG	-42	NA	108133059	108133306	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_108133100_108133300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180608	chr9	+	188	1	Intergenic	novelGene_5546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAACATTGGTTACATAGC	NA	False	NA	NA	False	NA	NA	NA	108144352	108144540	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_108144400_108144500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180613	chr9	-	167	1	Intergenic	novelGene_5547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATTTAAAAAAAGACTCT	1021	False	NA	0	True	NA	NA	NA	108160463	108160296	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_108160300_108160500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180619	chr9	-	204	1	Intergenic	novelGene_5548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTGCACCATGCCTGCC	NA	False	NA	NA	False	NA	NA	NA	108165192	108164988	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_108165000_108165200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180624	chr9	+	2121	6	FSM	ENSMUSG00000032606.8	ENSMUST00000035227.8	2133	6	12	0	-3	0	multi-exon	FALSE	canonical	3	101	junction_5	4.63033476111609	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTGTCAGCTGCTTGT	NA	False	NA	14	True	NA	NA	NA	108167639	108173697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_108167862_108170534_108170712_108171129_108171244_108171644_108171717_108172087_108172193_108172266
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180647	chr9	+	2073	6	FSM	ENSMUSG00000007815.14	ENSMUST00000007959.14	2197	6	133	-9	133	9	multi-exon	FALSE	canonical	3	1457	junction_4	47.4535562418666	579	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGTGTGTTGCTTTC	NA	False	NA	24	True	AATAAA	-24	NA	108183460	108215142	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_108183753_108192506_108192582_108204782_108204941_108208069_108208191_108212249_108212381_108213846
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180660	chr9	+	933	2	FSM	ENSMUSG00000063856.9	ENSMUST00000082429.8	1072	2	141	-2	-48	2	multi-exon	FALSE	canonical	3	8868	junction_1	0	930	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTCCTGTGTCATT	NA	False	NA	20	True	AATAAA	-20	NA	108216393	108217544	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_108216758_108216975
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180671	chr9	+	204	1	Intergenic	novelGene_5549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGTCAATTAGCTAAAAA	NA	False	NA	NA	False	TTTAAA	-7	NA	108222143	108222347	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_108222100_108222300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180685	chr9	+	3358	22	NIC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	-8	3	combination_of_known_junctions	FALSE	canonical	3	12	junction_17	154.349913157118	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGTTGTCCTCTAGTT	NA	False	NA	13	True	AGTAAA	-17	NA	108225087	108269461	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261580_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180695	chr9	+	199	1	Intergenic	novelGene_5550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACAGAGTTGACTGAGA	NA	False	NA	NA	False	NA	NA	NA	108252896	108253095	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_108252900_108253100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180698	chr9	+	174	1	Genic_Genomic	ENSMUSG00000104399.2	novel	NA	NA	NA	NA	1009	59	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATTAAATTTAAAAT	3212	False	NA	NA	False	NA	NA	NA	108267289	108267463	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr9_+_108267300_108267500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180703	chr9	+	179	1	Intergenic	novelGene_5551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAATTTAAGGATAAA	4689	False	NA	NA	False	NA	NA	NA	108332369	108332548	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_108332400_108332500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180718	chr9	+	2958	2	FSM	ENSMUSG00000049305.7	ENSMUST00000061209.7	3092	2	16	118	8	14	multi-exon	FALSE	canonical	3	208	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACAGCTGAATTAAGCATC	203	False	NA	28	True	AATAAA	-21	NA	108337741	108343019	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_108337817_108340136
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180724	chr9	-	180	1	Intergenic	novelGene_5552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATAGGATTTGAA	4587	False	NA	NA	False	NA	NA	NA	108354508	108354328	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_108354300_108354500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180727	chr9	+	5636	33	FSM	ENSMUSG00000052911.10	ENSMUST00000065014.10	5629	33	-7	0	-7	0	multi-exon	TRUE	canonical	3	106	junction_6	29.6719037980376	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTTGTCTGGCCTTTG	9085	False	NA	19	True	AATAAA	-16	NA	108357048	108367729	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_108357174_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366074_108366365_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180735	chr9	+	5598	33	NIC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	36.5231091228554	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTTGTCTGGCCTTTG	9118	False	NA	19	True	AATAAA	-16	NA	108357081	108367729	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_108357169_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366074_108366365_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180744	chr9	+	4664	27	FSM	ENSMUSG00000006676.17	ENSMUST00000085044.14	4520	27	-143	-1	100	1	multi-exon	FALSE	canonical	3	46	junction_5	64.3458319914706	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGTGACTGATCCACAAC	NA	False	NA	12	True	AATAAA	-16	NA	108367900	108379517	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370762_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180779	chr9	+	191	1	Genic_Genomic	ENSMUSG00000006676.17	novel	NA	NA	NA	NA	-263	3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGCTGGGATGGCACGA	NA	False	NA	NA	False	NA	NA	NA	108372471	108372662	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chr9_+_108372500_108372700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180786	chr9	+	2479	24	FSM	ENSMUSG00000032604.17	ENSMUST00000006838.16	2800	24	318	3	-32	2	multi-exon	FALSE	canonical	3	468	junction_2	39.8133167299073	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCGTCTCTCTGTTGTCTG	NA	False	NA	15	True	AATAAA	-18	NA	108385222	108393137	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_108385399_108385581_108385730_108386075_108386186_108386347_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390578_108390867_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392233_108392305_108392432_108392994
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180799	chr9	+	3241	10	FSM	ENSMUSG00000006673.15	ENSMUST00000112155.9	3040	10	-24	-177	-1	6	multi-exon	FALSE	canonical	3	392	junction_1	89.886485340754	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGAACGTGTCTTTATT	1146	False	NA	70	True	NA	NA	NA	108394284	108437368	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_108394440_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180806	chr9	+	3252	10	NIC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	173.205152034684	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGAACGTGTCTTTATT	1147	False	NA	70	True	NA	NA	NA	108394285	108437368	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_108394452_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180815	chr9	+	3286	11	NIC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	-6	2	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	232.186649056314	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	1157	False	NA	66	True	NA	NA	NA	108394295	108437364	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_108394440_108395965_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180844	chr9	+	4301	10	ISM	ENSMUSG00000006673.15	ENSMUST00000006851.15	3331	11	494	-2	9	2	3prime_fragment	FALSE	canonical	3	141	junction_1	164.63899902514	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	1668	False	NA	66	True	NA	NA	NA	108394806	108437364	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr9_+_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180857	chr9	+	1736	14	FSM	ENSMUSG00000062867.14	ENSMUST00000081111.14	1858	14	122	0	-31	0	multi-exon	TRUE	canonical	3	1280	junction_13	396.993628196225	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGAGTTCAATGGGCAC	1117	False	NA	36	True	AATAAA	-29	NA	108437606	108442783	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180870	chr9	+	1736	15	NIC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	-1	4	combination_of_known_junctions	FALSE	canonical	3	50	junction_9	848.284297862456	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAACTGATCTTTGAGT	1178	False	NA	25	True	AATAAA	-18	NA	108437667	108442772	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441111_108441184_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180887	chr9	+	1740	12	FSM	ENSMUSG00000019039.15	ENSMUST00000019183.14	1746	12	6	0	6	0	multi-exon	FALSE	canonical	3	83	junction_8	26.2473926292634	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGAGTGAGGCGTGTTC	NA	False	NA	15	True	AATAAA	-17	NA	108447090	108449973	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449064_108449139_108449317_108449385_108449497_108449591_108449661_108449749
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180899	chr9	-	4147	6	FSM	ENSMUSG00000066357.7	ENSMUST00000068700.7	4163	6	17	-1	17	1	multi-exon	FALSE	canonical	3	171	junction_5	13.1969693490589	270	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCCTTACCATCTCCG	5768	False	NA	0	True	AATAAA	-21	NA	108455921	108449508	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_108450613_108450687_108450807_108450892_108451010_108451103_108451200_108451299_108453782_108455692
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180920	chr9	-	3938	16	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	-11	0	combination_of_known_junctions	TRUE	canonical	3	359	junction_14	154.606683771002	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGAGTCTTTTTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	108526596	108480140	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521565_108522131_108522194_108526427
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180924	chr9	-	3976	17	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	155	junction_13	228.429112363114	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGAGTCTTTTTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	108526585	108480140	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521568_108522131_108522194_108526427
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180962	chr9	+	177	1	Antisense	novelGene_ENSMUSG00000064145.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATTAAAGCTACAC	4028	False	NA	NA	False	NA	NA	NA	108521778	108521955	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr9_+_108521800_108522000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180965	chr9	+	199	1	Intergenic	novelGene_5553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGAGACAGGTGGGCTG	2865	False	NA	NA	False	NA	NA	NA	108537084	108537283	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_108537100_108537300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000180990	chr9	+	202	1	Intergenic	novelGene_5554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTGGGGATTAGCTTGT	5658	False	NA	NA	False	NA	NA	NA	108575613	108575815	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_108575600_108575800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181014	chr9	+	1756	6	NIC	ENSMUSG00000032599.13	novel	1708	6	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	35.9243649909083	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTGCTGCTGTCGTTCT	NA	False	NA	15	True	AATACA	-19	NA	108661016	108683532	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_108661070_108673262_108673596_108675469_108675693_108676440_108676617_108681740_108681917_108682737
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181019	chr9	+	2974	13	FSM	ENSMUSG00000032598.9	ENSMUST00000035218.9	3360	13	-5	391	-5	-391	multi-exon	FALSE	canonical	3	52	junction_4	11.5551215196264	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCTTCCCTGTATGAT	3145	False	NA	5	True	AATAAA	-16	NA	108685561	108695652	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108689169_108689417_108689909_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181038	chr9	+	1631	13	FSM	ENSMUSG00000025651.15	ENSMUST00000026743.14	1653	13	40	-18	40	18	multi-exon	FALSE	canonical	3	5755	junction_3	194.83802033142	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGGCATGGAGTCCATT	NA	False	NA	36	True	AATAAA	-32	NA	108765740	108778709	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181049	chr9	+	1674	13	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	1708.58941983016	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCCTTCCTTAGA	NA	False	NA	18	True	AATAAA	-14	NA	108765761	108778691	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_108765938_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181070	chr9	+	1829	6	FSM	ENSMUSG00000025647.17	ENSMUST00000026737.12	1834	6	5	0	5	0	multi-exon	FALSE	canonical	3	153	junction_2	42.9678949914934	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCTTTCTTCAGCGCCT	NA	False	NA	18	True	AATAAA	-18	NA	108867657	108886792	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_108867833_108869937_108870095_108880434_108880522_108885045_108885162_108885354_108885574_108885717
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181074	chr9	+	1831	6	FSM	ENSMUSG00000025647.17	ENSMUST00000112059.10	1910	6	26	53	6	0	multi-exon	FALSE	canonical	3	51	junction_2	78.9186923358465	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCTTTCTTCAGCGCCT	NA	False	NA	18	True	AATAAA	-18	NA	108867658	108886792	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_108867833_108869937_108870095_108880431_108880522_108885045_108885162_108885354_108885574_108885717
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181090	chr9	-	2570	13	FSM	ENSMUSG00000025646.10	ENSMUST00000045011.9	2572	13	2	0	-2	0	multi-exon	FALSE	canonical	3	123	junction_2	14.834971819619	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTTTCCTGAGTCCGA	NA	False	NA	1	True	ATTAAA	-26	NA	108903190	108888814	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_108888977_108889330_108889581_108889696_108889778_108890177_108890270_108890599_108890737_108894195_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181103	chr9	-	639	4	FSM	ENSMUSG00000091537.3	ENSMUST00000167504.3	944	4	206	99	-3	-99	multi-exon	FALSE	canonical	3	4656	junction_3	487.196743284134	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTGTGTGTGCTTGTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	108911449	108907053	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_108907494_108911069_108911158_108911238_108911295_108911394
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181110	chr9	+	1528	4	FSM	ENSMUSG00000025645.9	ENSMUST00000026735.9	1526	4	0	-2	0	2	multi-exon	FALSE	canonical	3	70	junction_1	5.71547606649408	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTATATCAGACTCAGTT	NA	False	NA	16	True	ATTAAA	-30	NA	108911560	108921559	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_108911636_108918404_108918716_108919908_108920074_108920582
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181119	chr9	+	182	1	Intergenic	novelGene_5555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGGTAAGCTTAACCA	NA	False	NA	NA	False	NA	NA	NA	109473251	109473433	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_109473300_109473400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181125	chr9	+	1061	7	FSM	ENSMUSG00000032478.15	ENSMUST00000035053.12	1074	7	13	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	146.935359937627	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGCAAGCTTTCTCT	NA	False	NA	25	True	AATAAA	-32	NA	109661838	109672042	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_109661876_109662263_109662364_109664385_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181131	chr9	+	1119	7	FSM	ENSMUSG00000032478.15	ENSMUST00000200005.5	719	7	34	-434	2	7	multi-exon	FALSE	canonical	3	252	junction_1	126.972000413039	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGCAGTACTCCTGTGC	NA	False	NA	14	True	AATAAA	-21	NA	109661850	109672031	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_109661957_109662263_109662364_109664385_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181145	chr9	+	184	1	Intergenic	novelGene_5556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAATTAAGGAAAGAAATT	NA	False	NA	NA	False	NA	NA	NA	109681515	109681699	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_109681500_109681700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181156	chr9	+	3697	15	FSM	ENSMUSG00000032477.15	ENSMUST00000094324.8	3632	15	-64	-1	-64	1	multi-exon	FALSE	canonical	3	454	junction_8	39.8577188898467	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTGCCTAGTTCCTAAT	NA	False	NA	29	True	AATAAA	-19	NA	109704582	109722964	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181157	chr9	+	3693	15	NNC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_4	122.641442707544	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTGCCTAGTTCCTAA	NA	False	NA	28	True	AATAAA	-18	NA	109704582	109722963	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708904_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181171	chr9	+	3533	14	NIC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	145.238347259919	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTGCCTAGTTCCTAA	NA	False	NA	28	True	AATAAA	-18	NA	109704646	109722963	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181191	chr9	+	4848	19	FSM	ENSMUSG00000032479.16	ENSMUST00000165876.8	5573	19	-49	774	15	0	multi-exon	FALSE	canonical	3	101	junction_18	61.7868698345418	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTATTGAAATGGCCTG	NA	False	NA	23	True	AATAAA	-15	NA	109760882	109912241	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910908
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181215	chr9	+	237	1	Intergenic	novelGene_5557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCCTTGTAACTAGTGT	NA	False	NA	NA	False	AATAAA	-31	NA	109792630	109792867	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_109792600_109792900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181224	chr9	+	211	1	Intergenic	novelGene_5558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACTGACTGCTCTTCCA	NA	False	NA	NA	False	AAAACA	-16	NA	109859313	109859524	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_109859300_109859500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181226	chr9	+	192	1	FSM	ENSMUSG00000105962.2	ENSMUST00000197902.2	1617	1	516	909	516	-909	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAACAGGTAAATTTTGTA	9112	False	NA	NA	False	NA	NA	NA	109870763	109870955	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_109870800_109871000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181233	chr9	+	203	1	Intergenic	novelGene_5559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	342	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCCATTGGTGGACTAGT	9060	False	NA	NA	False	NA	NA	NA	109905499	109905702	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_109905500_109905700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181242	chr9	-	3901	22	NIC	ENSMUSG00000032480.18	novel	4441	23	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_20	148.196137730021	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109946484	109913387	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944558_109944651_109946425
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181243	chr9	-	3982	23	FSM	ENSMUSG00000032480.18	ENSMUST00000198425.5	3968	23	-14	0	1	0	multi-exon	FALSE	canonical	3	120	junction_20	140.114150629448	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109946504	109913387	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103_109944230_109944558_109944651_109946425
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181246	chr9	-	4056	24	NIC	ENSMUSG00000032480.18	novel	4441	23	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_19	182.775513865531	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109946484	109913387	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109937008_109937038_109938093_109938190_109942038_109942159_109944103_109944230_109944558_109944651_109946425
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181251	chr9	-	3956	23	NNC	ENSMUSG00000032480.18	novel	3968	23	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_21	160.130247864018	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109946484	109913387	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103_109944224_109944558_109944651_109946425
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181261	chr9	-	3780	19	FSM	ENSMUSG00000032480.18	ENSMUST00000062368.13	3806	19	26	0	-22	0	multi-exon	FALSE	canonical	3	264	junction_18	79.7176537599273	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109930129	109913387	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181269	chr9	-	4046	23	FSM	ENSMUSG00000032480.18	ENSMUST00000197928.5	4441	23	395	0	-2	0	multi-exon	FALSE	canonical	3	162	junction_20	135.338876788039	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109946503	109913387	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944230_109944558_109944651_109946425
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181299	chr9	+	189	1	Intergenic	novelGene_5560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGGGAATGGTAGTCAA	NA	False	NA	NA	False	NA	NA	NA	109926307	109926496	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_109926300_109926500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181303	chr9	+	193	1	Antisense	novelGene_ENSMUSG00000032480.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGACTGCTCTTCCAGA	2228	False	NA	NA	False	NA	NA	NA	109939458	109939651	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chr9_+_109939500_109939700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181307	chr9	-	1804	2	FSM	ENSMUSG00000032480.18	ENSMUST00000196788.2	1424	2	-42	-338	3	338	multi-exon	FALSE	canonical	3	279	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GACACCCCAAAAACAAAAAG	NA	False	NA	NA	False	NA	NA	NA	109946484	109942905	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_109944651_109946425
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181310	chr9	+	191	1	Intergenic	novelGene_5561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACTGACTGCTCTTCCA	5010	False	NA	NA	False	NA	NA	NA	109953289	109953480	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_109953300_109953500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181322	chr9	+	5722	28	FSM	ENSMUSG00000032481.18	ENSMUST00000088716.12	5717	28	1	-6	1	6	multi-exon	FALSE	canonical	3	994	junction_27	99.253261289205	656	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTGCATTCATCCATTC	2446	False	NA	30	True	AATAAA	-30	NA	109961048	110069252	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181345	chr9	-	218	1	Intergenic	novelGene_5562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATCTAACTGGTTAGAAC	NA	False	NA	NA	False	TTTAAA	-1	NA	109983357	109983139	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_109983100_109983400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181352	chr9	+	2441	5	FSM	ENSMUSG00000032482.10	ENSMUST00000196060.5	3790	5	1349	0	-351	0	multi-exon	TRUE	canonical	3	35	junction_4	8.38152730712011	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTAGTGCCGTGGCCT	9786	False	NA	20	True	AATAAA	-21	NA	110074199	110091644	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_110074763_110075362_110076459_110080026_110080216_110085212_110085289_110091127
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181355	chr9	+	194	1	Intergenic	novelGene_5563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATGGGCTGAGAGTTTT	NA	False	NA	NA	False	NA	NA	NA	110113613	110113807	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_110113600_110113800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181367	chr9	+	2060	7	FSM	ENSMUSG00000054836.13	ENSMUST00000199592.5	1304	7	23	-779	-8	0	multi-exon	FALSE	canonical	3	125	junction_6	18.4157239577729	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATTGTGTGTGTGTTCCT	2205	False	NA	6	True	AATAAA	-14	NA	110134263	110151170	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_110134418_110139162_110139242_110141636_110141708_110143043_110143163_110144818_110145021_110148637_110148785_110149882
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181370	chr9	+	189	1	Intergenic	novelGene_5564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACATCTTTTCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	110160215	110160404	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_110160200_110160400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181379	chr9	+	4137	23	NIC	ENSMUSG00000032485.15	novel	619	5	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	21.4736528936053	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGGCTGAAGTTCTTGT	NA	False	NA	11	True	AATAAA	-23	NA	110162357	110214018	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_110162418_110182013_110182233_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181391	chr9	+	4227	23	FSM	ENSMUSG00000032485.15	ENSMUST00000098350.10	4227	23	-4	4	-4	-4	multi-exon	FALSE	canonical	3	36	junction_1	22.4939385774762	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCAGGGGCTGAAGTTC	NA	False	NA	7	True	AATAAA	-19	NA	110162419	110214014	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_110162574_110182013_110182233_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181396	chr9	-	5329	25	FSM	ENSMUSG00000036057.12	ENSMUST00000040021.12	5346	25	15	2	15	-2	multi-exon	FALSE	canonical	3	45	junction_24	14.8742413438654	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAGTTCACCTACTGCT	NA	False	NA	-5	True	AATAAA	-19	NA	110237266	110214151	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110215418_110215521_110215707_110215798_110217720_110217808_110217989_110218079_110218232_110218308_110218464_110218540_110218859_110219110_110219257_110219537_110219604_110219697_110219813_110219918_110219999_110220111_110220171_110220276_110220334_110220701_110220750_110220834_110220967_110221049_110221131_110221552_110221685_110221770_110221821_110222438_110222516_110222768_110222897_110227188_110227264_110237101
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181404	chr9	+	185	1	Intergenic	novelGene_5565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTAAAAGACTCGCCTTCA	NA	False	NA	NA	False	NA	NA	NA	110292250	110292435	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_110292200_110292400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181411	chr9	+	249	1	Intergenic	novelGene_5566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	455	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTTTAATTATTATTAAA	NA	False	NA	NA	False	NA	NA	NA	110301450	110301699	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_110301400_110301700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181424	chr9	+	8286	21	NNC	ENSMUSG00000044791.17	novel	7442	19	NA	NA	-3402	0	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	21.2388794431345	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGCTCCCTCAAAATTA	NA	False	NA	20	True	AATAAA	-21	NA	110358262	110447682	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_+_110358374_110374367_110374384_110376276_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402679_110403343_110419455_110419505_110421466_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181426	chr9	+	8280	21	NNC	ENSMUSG00000044791.17	novel	7442	19	NA	NA	-3402	-3	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_13	24.3052977764108	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTGTGCTCCCTCAAAA	NA	False	NA	17	True	AATAAA	-18	NA	110358262	110447679	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_+_110358374_110374367_110374384_110376276_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402679_110403343_110419455_110419505_110421469_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181431	chr9	+	184	1	Intergenic	novelGene_5567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACACATATCTCAGAAGAAT	3430	False	NA	NA	False	NA	NA	NA	110384375	110384559	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_110384400_110384600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181441	chr9	-	2020	4	NIC	ENSMUSG00000032491.15	novel	1223	5	NA	NA	7	0	intron_retention	TRUE	canonical	3	126	junction_2	1.88561808316413	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTTGGCTCCTTGGACC	8952	False	NA	-5	True	ATTAAA	-25	NA	110453492	110450202	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_110450806_110450907_110451051_110451139_110452304_110453382
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181442	chr9	-	1202	5	FSM	ENSMUSG00000032491.15	ENSMUST00000035069.14	1223	5	21	0	0	0	multi-exon	FALSE	canonical	3	119	junction_3	3.96074487943871	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTTGGCTCCTTGGACC	8945	False	NA	-5	True	ATTAAA	-25	NA	110453499	110450202	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_110450806_110450907_110451051_110451139_110451330_110452154_110452304_110453382
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181451	chr9	+	813	7	FSM	ENSMUSG00000019659.9	ENSMUST00000019803.9	834	7	9	12	9	1	multi-exon	FALSE	canonical	3	695	junction_3	22.4258035902098	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTGTTTCATTTCCTA	8491	False	NA	17	True	AATAAA	-17	NA	110485579	110540662	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_110485727_110521383_110521452_110537513_110537594_110538961_110539024_110539194_110539230_110540153_110540231_110540318
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181461	chr9	+	186	1	Intergenic	novelGene_5568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAAAGACAGCCT	1673	False	NA	NA	False	NA	NA	NA	110534383	110534569	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_110534400_110534600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181463	chr9	+	227	1	Intergenic	novelGene_5569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTAACTGTTCTTCCAGA	NA	False	NA	NA	False	AAAAAG	-30	NA	110566984	110567211	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_110567000_110567200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181467	chr9	-	232	1	Intergenic	novelGene_5570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCGCAGCACTTAGAAGG	NA	False	NA	NA	False	NA	NA	NA	110625783	110625551	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_110625600_110625800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181475	chr9	+	213	1	Intergenic	novelGene_5571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAAACCCAAACTAAACA	354	False	NA	NA	False	NA	NA	NA	110766589	110766802	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_110766600_110766800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181491	chr9	-	3448	5	ISM	ENSMUSG00000032494.13	ENSMUST00000035075.13	1932	6	64	0	0	0	intron_retention	FALSE	canonical	3	3873	junction_3	415.110828574731	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTAGTGCCTTATTTC	NA	False	NA	-15	True	AGTAAA	-21	NA	110775162	110768670	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr9_-_110769888_110771396_110771507_110771597_110771713_110772219_110772322_110773258
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181496	chr9	-	1766	5	NIC	ENSMUSG00000032494.13	novel	1932	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_3	2037.2819361836	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTAGTGCCTTATTTC	NA	False	NA	-15	True	AGTAAA	-21	NA	110775162	110768670	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_110769888_110771396_110771507_110771597_110771713_110773258_110773312_110774891
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181505	chr9	-	1925	7	FSM	ENSMUSG00000032494.13	ENSMUST00000197460.5	1290	7	0	-635	0	-5	multi-exon	FALSE	canonical	1	3	junction_4	2178.41216383759	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGTGAGTAGTGCCTT	NA	False	NA	-20	True	AGTAAA	-16	NA	110775162	110768675	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_110769888_110771396_110771507_110771597_110771713_110771835_110771898_110772219_110772322_110773258_110773312_110774891
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181507	chr9	-	4380	4	ISM	ENSMUSG00000032494.13	ENSMUST00000035075.13	1932	6	64	5	0	-5	intron_retention	FALSE	canonical	3	3873	junction_3	461.363197491954	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGTGAGTAGTGCCTT	NA	False	NA	-20	True	AGTAAA	-16	NA	110775162	110768675	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chr9_-_110769888_110771396_110771507_110771597_110771713_110772219
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181518	chr9	-	2823	6	NNC	ENSMUSG00000032494.13	novel	1290	7	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_1	1780.14781408736	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGTGAGTAGTGCCTT	NA	False	NA	-20	True	AGTAAA	-16	NA	110775162	110768675	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_-_110770848_110771396_110771507_110771597_110771713_110772219_110772322_110773258_110773312_110774891
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181526	chr9	+	185	1	Intergenic	novelGene_5572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCACACATGCCCATATGT	3051	False	NA	NA	False	NA	NA	NA	110772817	110773002	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_110772800_110773000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181540	chr9	+	3292	15	FSM	ENSMUSG00000032497.20	ENSMUST00000196981.5	1839	15	-8	-1445	-6	0	multi-exon	FALSE	canonical	0	0	junction_2	57.6262146270679	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGCATCCTGTGGTCT	NA	False	NA	15	True	GATAAA	-20	NA	110947172	111054735	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111022114_111022187_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181553	chr9	-	4843	19	FSM	ENSMUSG00000032498.10	ENSMUST00000035079.10	2754	19	212	-2301	21	2274	multi-exon	FALSE	canonical	0	0	junction_3	91.190277259512	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGATTTCTGGGACCTT	NA	False	NA	0	True	ATTAAA	-14	NA	111100647	111055021	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181588	chr9	+	210	1	Intergenic	novelGene_5573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTAGGCATATGTGGAT	NA	False	NA	NA	False	NA	NA	NA	111705164	111705374	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_111705200_111705400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181595	chr9	-	5972	18	NNC	ENSMUSG00000032504.16	novel	5951	18	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	77.3019514339821	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGTGGAGTATGAATTC	NA	False	NA	-9	True	AATAAA	-17	NA	113537339	113480811	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_-_113484176_113485084_113485276_113486144_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181598	chr9	-	5959	18	FSM	ENSMUSG00000032504.16	ENSMUST00000035086.13	5951	18	-8	0	-8	0	multi-exon	FALSE	canonical	3	268	junction_2	35.4147936949624	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGTGGAGTATGAATTC	NA	False	NA	-9	True	AATAAA	-17	NA	113537335	113480811	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181610	chr9	+	234	1	Intergenic	novelGene_5574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGATTTATTTATTATTA	NA	False	NA	NA	False	ATTAAA	-19	NA	113523844	113524078	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_113523800_113524100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181615	chr9	+	6326	36	NIC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	-26	15	combination_of_known_splicesites	FALSE	canonical	3	90	junction_24	28.274947445773	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTAGCTCAGCTCTTTC	NA	False	NA	30	True	AATAAA	-31	NA	113570514	113748765	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_113570944_113590657_113590737_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181626	chr9	-	186	1	Intergenic	novelGene_5575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATTAAGGCTGGGTAT	NA	False	NA	NA	False	NA	NA	NA	113598107	113597921	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_113597900_113598100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181632	chr9	+	3614	17	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	191	0	intron_retention	TRUE	canonical	3	95	junction_1	91.3275141660497	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1493	False	NA	23	True	AATAAA	-23	NA	113760192	113806270	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181648	chr9	+	3486	16	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	211	0	intron_retention	FALSE	canonical	3	95	junction_1	93.8633522142103	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1513	False	NA	23	True	AATAAA	-23	NA	113760212	113806270	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181649	chr9	+	3555	16	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	211	0	intron_retention	FALSE	canonical	3	42	junction_1	104.062673423279	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1513	False	NA	23	True	AATAAA	-23	NA	113760212	113806270	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_+_113760288_113760575_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181650	chr9	+	3642	17	FSM	ENSMUSG00000009741.16	ENSMUST00000084885.12	3850	17	211	-3	211	0	multi-exon	FALSE	canonical	3	95	junction_1	91.3275141660497	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1513	False	NA	23	True	AATAAA	-23	NA	113760212	113806270	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181655	chr9	+	3533	16	FSM	ENSMUSG00000009741.16	ENSMUST00000009885.14	3742	16	212	-3	212	0	multi-exon	FALSE	canonical	3	95	junction_1	93.8633522142103	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1514	False	NA	23	True	AATAAA	-23	NA	113760213	113806270	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181677	chr9	+	194	1	Intergenic	novelGene_5576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGGGCTGTGTAAGCC	NA	False	NA	NA	False	NA	NA	NA	114190491	114190685	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_114190500_114190700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181690	chr9	+	158	1	Intergenic	novelGene_5577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAACTGTAGAATT	NA	False	NA	NA	False	NA	NA	NA	114212659	114212817	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_114212700_114212800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181697	chr9	+	2393	16	FSM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	5	-2	5	2	multi-exon	FALSE	canonical	3	295	junction_2	39.3725228497687	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGTCCTGTCATTAATA	NA	False	NA	26	True	AATAAA	-17	NA	114230148	114303447	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_114230338_114246028_114246199_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302905
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181704	chr9	+	2212	15	NIC	ENSMUSG00000045594.11	novel	2396	16	NA	NA	-16	2	combination_of_known_junctions	FALSE	canonical	3	112	junction_1	76.8975265651421	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGTCCTGTCATTAATA	NA	False	NA	26	True	AATAAA	-17	NA	114230159	114303447	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_+_114230338_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302905
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181726	chr9	+	3560	1	Intergenic	novelGene_5578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGTGTCCATTCTTCAGA	NA	False	NA	16	True	AATAAA	-24	NA	114236712	114240272	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_114236700_114240300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181729	chr9	+	198	1	Intergenic	novelGene_5579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGGAGCCAGGTGCCACT	NA	False	NA	NA	False	NA	NA	NA	114323156	114323354	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_114323200_114323400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181749	chr9	+	205	1	Intergenic	novelGene_5580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCGATCGGGGCTGAAGT	8152	False	NA	NA	False	NA	NA	NA	114409660	114409865	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_114409700_114409900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181789	chr9	-	3794	18	NIC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	4	-135	intron_retention	FALSE	canonical	3	299	junction_6	61.6594621559125	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTTGTTGGTTTGTG	NA	False	NA	-12	True	TATAAA	-18	NA	114469244	114415168	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181806	chr9	+	197	1	Intergenic	novelGene_5581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACGTTGAAAAACACTGAG	NA	False	NA	NA	False	NA	NA	NA	114475049	114475246	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_114475000_114475200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181816	chr9	-	174	1	Intergenic	novelGene_5582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCGTATGTCTCTTTGACA	770	False	NA	NA	False	NA	NA	NA	114500463	114500289	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_114500300_114500500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181822	chr9	+	186	1	Intergenic	novelGene_5583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCAGTGGTGGCGCAC	NA	False	NA	NA	False	NA	NA	NA	114503174	114503360	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_114503200_114503400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181825	chr9	+	2672	13	FSM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	-55	-16	-55	16	multi-exon	FALSE	canonical	3	336	junction_8	45.3210767744986	369	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTTTCTTATAT	2071	False	NA	19	True	AATAAA	-32	NA	114517802	114553386	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_114518096_114518276_114518351_114534121_114534239_114535074_114535306_114538212_114538383_114542577_114542672_114544161_114544298_114544667_114544780_114546930_114546991_114548925_114548971_114549616_114549738_114550772_114550926_114552320
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181882	chr9	+	3672	12	FSM	ENSMUSG00000040875.13	ENSMUST00000183104.8	2477	12	-145	-1050	-145	1048	multi-exon	FALSE	canonical	3	27	junction_1	15.4807264868928	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGTGTCTTGTGTTATT	NA	False	NA	NA	False	ATTAAA	-3	NA	114807491	115062341	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_114808033_114890900_114891077_114896313_114896394_114938467_114938660_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181890	chr9	-	191	1	Intergenic	novelGene_5584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGCACTCATACACATAA	7743	False	NA	NA	False	NA	NA	NA	114811338	114811147	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_114811100_114811300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181900	chr9	+	195	1	Intergenic	novelGene_5585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGTCTCGTGTATCCCAG	NA	False	NA	NA	False	NA	NA	NA	115039123	115039318	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_115039100_115039300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181906	chr9	-	4387	16	FSM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	-54	-112	-54	112	multi-exon	FALSE	canonical	3	623	junction_10	54.7444974403821	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTCTCTTGCAGACCT	NA	False	NA	0	True	AATAAA	-21	NA	115139543	115071536	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181949	chr9	+	7603	24	FSM	ENSMUSG00000038708.11	ENSMUST00000084820.6	7583	24	-17	-3	-17	3	multi-exon	FALSE	canonical	3	96	junction_12	49.6666772391441	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTCATTGTGCTTCTT	NA	False	NA	10	True	AATAAA	-18	NA	118335317	118411590	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181978	chr9	-	156	1	Intergenic	novelGene_5586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATTAGACATAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	118874745	118874589	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_118874600_118874700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000181992	chr9	+	184	1	Intergenic	novelGene_5587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGAGGCAGGCAG	1200	False	NA	NA	False	NA	NA	NA	118927868	118928052	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_118927900_118928100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182003	chr9	-	4656	18	FSM	ENSMUSG00000036737.13	ENSMUST00000040853.11	4647	18	-9	0	-9	0	multi-exon	FALSE	canonical	3	230	junction_10	22.0306486733564	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTCATTTATTTATTTA	5563	False	NA	47	True	AATAAA	-29	NA	119151502	119067497	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119123480_119123590_119133870_119133984_119151070
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182021	chr9	+	191	1	Intergenic	novelGene_5588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	562	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTAGTTTGGGCTGGAG	1262	False	NA	NA	False	NA	NA	NA	119103758	119103949	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_119103800_119103900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182045	chr9	+	3227	19	FSM	ENSMUSG00000035769.10	ENSMUST00000039610.10	3383	19	169	-13	-19	4	multi-exon	FALSE	canonical	3	51	junction_3	12.9909750249458	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACCTCTCCTTGCTTCCC	NA	False	NA	24	True	AATAAA	-24	NA	119186615	119222399	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_119186774_119188297_119188381_119190179_119190250_119193562_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495_119219591_119220806
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182058	chr9	+	3508	11	FSM	ENSMUSG00000061393.15	ENSMUST00000215746.2	3175	11	-316	-17	10	17	multi-exon	TRUE	canonical	3	128	junction_3	23.1622537763491	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTCTTCTAGTCAGT	NA	False	NA	NA	False	AATAGA	-17	NA	119231193	119264078	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_119231664_119256520_119256729_119257032_119257143_119257266_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182077	chr9	+	3853	19	FSM	ENSMUSG00000032512.8	ENSMUST00000036561.8	3845	19	-7	-1	-7	0	multi-exon	FALSE	canonical	3	235	junction_17	23.7904950415284	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGTGCTGGACATGTT	NA	False	NA	30	True	AATAAA	-18	NA	119723936	119755653	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182090	chr9	-	2570	9	FSM	ENSMUSG00000032513.9	ENSMUST00000035099.9	3906	9	5	1331	5	-1331	multi-exon	FALSE	canonical	3	103	junction_5	11.0898320546346	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTGTAACTAAAGCTTT	NA	False	NA	0	True	AATAAA	-19	NA	119766626	119755653	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_119757103_119757292_119757446_119757878_119758030_119758616_119758828_119759038_119759170_119759285_119759373_119761686_119761891_119762327_119762409_119766523
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182100	chr9	-	2944	5	NIC	ENSMUSG00000032515.9	novel	2906	5	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	4.71036092035419	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTCTTCTTGGTGAGG	NA	False	NA	2	True	AATAAA	-17	NA	119813775	119800228	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_119802278_119802429_119802745_119803219_119803480_119806067_119806312_119813699
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182106	chr9	+	175	1	Intergenic	novelGene_5589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCTTGGGCTGGAGAGAT	NA	False	NA	NA	False	NA	NA	NA	119817829	119818004	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_119817800_119818000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182110	chr9	-	238	1	Intergenic	novelGene_5590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAAGAAAATCAATCTC	NA	False	NA	NA	False	NA	NA	NA	119832914	119832676	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_119832700_119832900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182139	chr9	+	1027	7	NNC	ENSMUSG00000032518.7	novel	1938	7	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	123	junction_6	1794.22347796725	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATGGTCCTCACTGCAG	NA	False	NA	5	True	AATAAA	-15	NA	119956852	119960625	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_+_119956897_119957522_119957689_119958223_119958343_119959183_119959430_119959833_119959963_119960065_119960232_119960468
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182150	chr9	+	1057	4	FSM	ENSMUSG00000006941.6	ENSMUST00000007139.6	1035	4	-14	-8	-14	8	multi-exon	FALSE	canonical	3	407	junction_2	26.9608770051883	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACTTTGTTTTCTTTGCT	NA	False	NA	42	True	AATAAA	-44	NA	120321542	120324404	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_120321908_120323172_120323337_120323600_120323703_120323978
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182162	chr9	+	1002	6	FSM	ENSMUSG00000025794.10	ENSMUST00000165532.3	1009	6	11	-4	11	4	multi-exon	FALSE	canonical	3	10044	junction_1	2651.61525112525	1448	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAGTCGAGTATAATTGT	NA	False	NA	30	True	AATAAA	-39	NA	120400520	120403724	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_120400608_120401161_120401264_120401833_120401929_120402641_120402742_120402829_120402884_120403160
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182176	chr9	-	186	1	Intergenic	novelGene_5591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAGTGCCATTTAATACT	NA	False	NA	NA	False	NA	NA	NA	120499680	120499494	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_120499500_120499700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182179	chr9	-	178	1	Intergenic	novelGene_5592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCGGAGTGAACATGGAC	NA	False	NA	NA	False	NA	NA	NA	120513138	120512960	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_120513000_120513100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182189	chr9	+	3676	15	FSM	ENSMUSG00000006932.18	ENSMUST00000007130.15	3623	15	-53	0	-53	0	multi-exon	FALSE	canonical	3	499	junction_2	74.0160283248135	264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTCATTTTGTTTGTT	NA	False	NA	27	True	ATTAAA	-16	NA	120762412	120789573	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_120762705_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182209	chr9	+	190	1	Intergenic	novelGene_5593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAACATGGGTAGGTAGCA	NA	False	NA	NA	False	NA	NA	NA	121041123	121041313	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_121041100_121041300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182221	chr9	+	5281	17	FSM	ENSMUSG00000032536.13	ENSMUST00000238988.2	3353	17	-8	-1920	2	1	multi-exon	TRUE	canonical	3	114	junction_15	40.0713718725726	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTTTTTTTAGTA	NA	False	NA	12	True	AATAAA	-20	NA	121126569	121303985	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289644_121298050_121298154_121301302
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182242	chr9	+	3542	14	FSM	ENSMUSG00000032536.13	ENSMUST00000211439.2	3533	14	-9	0	-9	0	multi-exon	FALSE	canonical	3	209	junction_1	23.6693195168457	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCGCCTTTCTTTTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	121126590	121284948	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182249	chr9	+	204	1	Intergenic	novelGene_5594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	592	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCAGTTCCTGCCCCTTC	NA	False	NA	NA	False	NA	NA	NA	121198159	121198363	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_121198200_121198400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182263	chr9	+	534	3	FSM	ENSMUSG00000032526.12	ENSMUST00000035113.11	577	3	43	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	21	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGTCCCATGTCAACT	NA	False	NA	11	True	AATAAA	-16	NA	121539437	121541987	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_121539538_121539704_121539782_121541630
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182272	chr9	-	263	1	Intergenic	novelGene_5595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAACCTACGAGTGACTT	NA	False	NA	NA	False	NA	NA	NA	121547300	121547037	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_121547000_121547300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182281	chr9	-	1499	4	FSM	ENSMUSG00000038412.9	ENSMUST00000060251.8	2232	4	736	-3	-13	3	multi-exon	FALSE	canonical	3	2040	junction_3	82.3825763671475	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGTCTTGTTTTTATT	NA	False	NA	0	True	ATTAAA	-16	NA	121686692	121677625	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_121678756_121679253_121679389_121681556_121681676_121686577
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182307	chr9	-	2603	13	FSM	ENSMUSG00000037949.9	ENSMUST00000042546.4	2653	13	32	18	-5	0	multi-exon	FALSE	canonical	3	21	junction_1	6.44797556515911	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCTTCTCCAAGACTT	NA	False	NA	-15	True	ATTAAA	-19	NA	122123457	122004957	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_122005545_122030836_122030954_122080212_122080342_122082001_122082194_122086121_122086305_122087982_122088058_122088600_122088657_122090149_122090720_122092735_122092856_122100264_122100400_122101432_122101631_122104576_122104730_122123369
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182316	chr9	+	2995	7	FSM	ENSMUSG00000032540.17	ENSMUST00000156520.8	3157	7	162	0	-19	0	multi-exon	FALSE	canonical	3	74	junction_5	12.9925192151313	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGGGTGAGCTGTGTGT	NA	False	NA	4	True	AATAAA	-17	NA	122180834	122210589	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_122180905_122194200_122194287_122196953_122197327_122204970_122205126_122206923_122207036_122207886_122208074_122208577
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182329	chr9	+	206	1	Intergenic	novelGene_5596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTGATTACAATTGATT	NA	False	NA	NA	False	NA	NA	NA	122382290	122382496	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_122382300_122382500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182335	chr9	-	186	1	Intergenic	novelGene_5597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAACATAGGTTTCAAC	NA	False	NA	NA	False	NA	NA	NA	122592999	122592813	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_-_122592800_122593000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182342	chr9	+	181	1	Intergenic	novelGene_5598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACAAACACTGAAAGCGAA	NA	False	NA	NA	False	NA	NA	NA	122597553	122597734	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_122597600_122597700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182350	chr9	-	6270	7	NIC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	6	-13	combination_of_known_junctions	FALSE	canonical	3	44	junction_3	42.9434382518318	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTGACATCTATATAAT	NA	False	NA	-7	True	AATAAA	-22	NA	122695044	122677987	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_122683054_122683771_122683883_122685763_122685891_122686131_122686227_122686534_122686704_122690773_122691410_122694978
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182351	chr9	-	6233	7	NIC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	7	-13	combination_of_known_junctions	FALSE	canonical	3	67	junction_3	36.0262250157977	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTGACATCTATATAAT	NA	False	NA	-7	True	AATAAA	-22	NA	122695043	122677987	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chr9_-_122683054_122683771_122683883_122685763_122685891_122686167_122686227_122686534_122686704_122690773_122691410_122694978
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182376	chr9	+	2023	4	FSM	ENSMUSG00000057895.12	ENSMUST00000051667.14	2010	4	-15	2	-15	-2	multi-exon	FALSE	canonical	3	61	junction_1	7.71722460186015	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACTTTGTTTTAACTGT	4859	False	NA	9	True	AATAAA	-20	NA	122752121	122760091	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_122752284_122754072_122754362_122755374_122755520_122758664
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182390	chr9	+	4845	35	FSM	ENSMUSG00000036768.7	ENSMUST00000040717.7	4858	35	13	0	-6	0	multi-exon	FALSE	canonical	3	157	junction_12	27.7337969778696	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAAATACTATGCCT	NA	False	NA	8	True	AATAAA	-18	NA	122780123	122847798	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182406	chr9	-	4781	7	FSM	ENSMUSG00000025786.18	ENSMUST00000238520.2	5376	7	-47	642	10	-642	multi-exon	FALSE	canonical	3	33	junction_1	93.3196418529109	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGGGTCCAGCTTTCA	8724	False	NA	NA	False	AATAAA	-13	NA	122942259	122895866	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_122899684_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929327_122929658_122942060
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182416	chr9	-	2461	7	FSM	ENSMUSG00000025786.18	ENSMUST00000147563.9	6987	7	5	4521	4	1	multi-exon	FALSE	canonical	3	232	junction_1	22.8454955443445	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGCTCTGCTCTCTCCCC	8718	False	NA	0	True	AATAAA	-17	NA	122942265	122905895	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929327_122929658_122942060
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182432	chr9	+	1035	8	FSM	ENSMUSG00000025785.6	ENSMUST00000026891.5	1053	8	19	-1	-8	1	multi-exon	FALSE	canonical	3	1140	junction_3	103.377058995362	205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTGTTAGCATCTCCA	NA	False	NA	16	True	AATAAA	-21	NA	122942298	122965195	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_122942388_122947955_122948058_122948305_122948401_122956870_122957037_122959588_122959660_122959891_122960016_122960949_122961106_122964963
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182441	chr9	+	207	1	Intergenic	novelGene_5599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCCTGAAGTTGGCTGG	4951	False	NA	NA	False	NA	NA	NA	122986500	122986707	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_122986500_122986700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182443	chr9	-	1760	1	FSM	ENSMUSG00000054871.6	ENSMUST00000068140.6	1712	1	-48	0	-48	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGTTTCCTTTATTT	NA	False	NA	3	True	AATACA	-19	NA	123089877	123088117	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_-_123088100_123089900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182458	chr9	+	4858	8	FSM	ENSMUSG00000025239.4	ENSMUST00000026269.4	4848	8	-10	0	-10	0	multi-exon	FALSE	canonical	3	33	junction_2	3.69776545872708	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCAAGACTGTCTTCTTT	NA	False	NA	7	True	AATAAA	-23	NA	123307760	123350617	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chr9_+_123309687_123329195_123329298_123339572_123339641_123340280_123340344_123345839_123345971_123346427_123346480_123347160_123347230_123348170
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182487	chr9	+	196	1	Intergenic	novelGene_5600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTTATTTTTTATTGC	NA	False	NA	NA	False	NA	NA	NA	123693919	123694115	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chr9_+_123693900_123694100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182495	chr9	-	1704	4	NNC	ENSMUSG00000110834.2	novel	461	4	NA	NA	-53	1819	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_1	29.8477618740315	22	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	NNNNNNNNNNNNNNNNNNNN	NA	False	NA	NA	False	NA	NA	NA	124044822	124031168	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_-_124032567_124033755_124033817_124033999_124034127_124044704
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182508	chr9	+	2195	13	NNC	ENSMUSG00000093803.6	novel	4016	11	NA	NA	-427	1097	at_least_one_novel_splicesite	TRUE	canonical	3	45	junction_1	43.8003678320425	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGGGTGCACAGTCAGG	NA	False	NA	20	True	AATAAA	-21	NA	124195399	124202493	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_+_124196070_124197152_124197351_124197648_124197753_124197928_124198032_124198703_124198779_124199151_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794_124201908_124202239
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182516	chr9	+	1897	13	NNC	ENSMUSG00000093803.6	novel	422	4	NA	NA	-22	1097	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	49.060266226573	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGGGTGCACAGTCAGG	NA	False	NA	20	True	AATAAA	-21	NA	124196375	124202493	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chr9_+_124196748_124197152_124197351_124197648_124197753_124197928_124198032_124198703_124198779_124199151_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794_124201908_124202239
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182526	chrM	+	2619	1	FSM	ENSMUSG00000064339.1	ENSMUST00000082390.1	1582	1	-2	-1035	-2	1035	mono-exon	FALSE	NA	NA	NA	NA	NA	1572	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGTCTGATAAAAGAATTA	-5	True	NA	-14	True	NA	NA	NA	1091	3710	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrM_+_1100_3700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182533	chrM	+	3171	1	FSM	ENSMUSG00000064351.1	ENSMUST00000082402.1	1545	1	-1553	-73	-1553	73	mono-exon	FALSE	NA	NA	NA	NA	NA	2901	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTAGTAAAATCAATTACA	335	False	NA	NA	False	NA	NA	NA	3774	6945	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrM_+_3800_6900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182544	chrM	+	690	1	FSM	ENSMUSG00000064354.1	ENSMUST00000082405.1	684	1	-1	-5	-1	5	mono-exon	FALSE	NA	NA	NA	NA	NA	524	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGAAGCTAAGAGCGTTA	-2	True	NA	NA	False	ACTAAA	-40	NA	7011	7701	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrM_+_7000_7700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182555	chrM	+	1628	1	FSM	ENSMUSG00000064358.1	ENSMUST00000082409.1	784	1	-843	-1	-843	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2056	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCCTTAGTATAATTAATA	-13	True	NA	NA	False	NA	NA	NA	7763	9391	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrM_+_7800_9400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182567	chrM	+	1671	1	FSM	ENSMUSG00000064363.1	ENSMUST00000082414.1	1378	1	-292	-1	-292	1	mono-exon	FALSE	NA	NA	NA	NA	NA	856	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAATATAGTTTACAAAAAA	-3	True	NA	14	True	NA	NA	NA	9874	11545	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrM_+_9900_11500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182582	chrM	-	769	1	FSM	ENSMUSG00000064372.1	ENSMUST00000082423.1	67	1	-766	64	-766	-64	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTAGTTTAATTAGAATA	0	True	NA	-2	True	CATAAA	-35	NA	16188	15419	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrM_-_15400_16200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182591	chrUn_GL456367v1	+	196	1	Intergenic	novelGene_5601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTTAGTGTTTTCAGGC	NA	False	NA	NA	False	NA	NA	NA	12380	12576	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrUn_GL456367v1_+_12400_12600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182604	chrUn_JH584304v1	-	2440	7	Intergenic	novelGene_5602	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	296	junction_1	199.023170063745	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATCTTCTGTCTTCCCCAG	NA	False	NA	-33	True	AATAAA	-22	NA	59731	52186	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrUn_JH584304v1_-_52368_53535_54480_54720_54868_55111_55702_56985_57152_58563_58836_59591
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182620	chrUn_JH584304v1	-	3605	6	Intergenic	novelGene_5603	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	517	junction_4	134.863783129497	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAATCTTCTGTCTTCCC	NA	False	NA	-36	True	AATAAA	-19	NA	59731	52189	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_56985_57152_58563_58836_59591
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182635	chrUn_JH584304v1	-	2757	5	Intergenic	novelGene_5604	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	149	junction_3	340.077197118537	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59035	52668	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55511_55702_58563
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182673	chrUn_JH584304v1	-	2718	5	Intergenic	novelGene_5605	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	517	junction_4	148.706716391695	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGTGTTGTCCTGGGCT	NA	False	NA	-5	True	AGTAAA	-17	NA	59035	53136	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_56985_57152_58563
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182680	chrUn_MU069435v1	+	589	1	Intergenic	novelGene_5606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	389	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGGGCTTTCCCGTGGCA	NA	False	NA	29	True	NA	NA	NA	0	589	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrUn_MU069435v1_+_0_600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182687	chrUn_MU069435v1	+	243	3	Intergenic	novelGene_5607	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	139	junction_1	109.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCATGTAGCAGTTGTA	NA	False	NA	NA	False	NA	NA	NA	3309	7357	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrUn_MU069435v1_+_3351_3591_3670_7233
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182694	chrUn_MU069435v1	-	258	2	Intergenic	novelGene_5608	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAGCCAGGCAGTGGTGG	NA	False	NA	NA	False	TTTAAA	-5	NA	6763	4416	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrUn_MU069435v1_-_4528_6616
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182714	chrUn_MU069435v1	+	382	1	Intergenic	novelGene_5609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCTCCAGCTATTTAT	NA	False	NA	NA	False	AATAAA	-14	NA	14904	15286	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrUn_MU069435v1_+_14900_15300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182719	chrUn_MU069435v1	+	382	1	Intergenic	novelGene_5610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCTCCAGCTATTTAT	NA	False	NA	NA	False	AATAAA	-14	NA	21674	22056	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrUn_MU069435v1_+_21700_22100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182727	chrUn_MU069435v1	-	372	1	Intergenic	novelGene_5611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	AAGAAA	-1	NA	28003	27631	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrUn_MU069435v1_-_27600_28000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182735	chrX	+	2682	2	FSM	ENSMUSG00000073295.5	ENSMUST00000103007.4	3036	2	-5	359	-5	-359	multi-exon	FALSE	canonical	3	23	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTAGAAGTTACTTGGA	NA	False	NA	14	True	NA	NA	NA	5959501	5966805	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_5960459_5965080
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182742	chrX	-	2172	1	FSM	ENSMUSG00000073294.5	ENSMUST00000117544.2	2201	1	29	0	29	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTTGTTGTGGTACAA	NA	False	NA	1	True	AATAAA	-24	NA	5995444	5993272	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_5993300_5995400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182752	chrX	+	8268	9	FSM	ENSMUSG00000068270.16	ENSMUST00000103005.10	4839	9	186	-3615	186	4	multi-exon	FALSE	canonical	2	6	junction_3	2.54644359843292	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTCGTCTCTGATGTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	6312093	6549506	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_6312316_6432846_6432999_6492882_6493018_6495245_6497710_6503009_6503072_6535713_6536491_6541154_6541336_6544276_6544547_6545501
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182755	chrX	+	173	1	Intergenic	novelGene_5612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTTAAAGAGTA	NA	False	NA	NA	False	NA	NA	NA	6377298	6377471	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_6377300_6377500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182763	chrX	-	8377	12	FSM	ENSMUSG00000004317.15	ENSMUST00000004428.14	8390	12	13	0	13	0	multi-exon	FALSE	canonical	3	32	junction_11	7.74596669241483	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGTCTGTTTCTGAAGA	NA	False	NA	0	True	AATAAA	-22	NA	7054940	7020048	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7054770
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182801	chrX	-	1185	5	FSM	ENSMUSG00000031146.7	ENSMUST00000033486.6	1157	5	-24	-4	-24	4	multi-exon	FALSE	canonical	3	2052	junction_4	105.587641322268	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTAACTTTTTTTGATG	NA	False	NA	NA	False	AATAAA	-32	NA	7537653	7534175	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_7534746_7535165_7535257_7535653_7535750_7535841_7535998_7537381
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182819	chrX	+	3519	11	FSM	ENSMUSG00000031148.15	ENSMUST00000049896.13	3579	11	63	-3	63	3	multi-exon	FALSE	canonical	3	223	junction_9	32.218007387174	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCATTTGTGTTATCTCT	NA	False	NA	NA	False	NA	NA	NA	7563432	7576504	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_7563635_7564731_7564893_7564994_7565120_7568301_7568412_7569608_7569823_7571538_7571672_7572249_7572389_7572566_7572691_7572930_7573001_7574174_7574261_7574349
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182828	chrX	-	190	1	Intergenic	novelGene_5613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTGCTAGTTTATTAGG	5406	False	NA	NA	False	NA	NA	NA	7568872	7568682	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_7568700_7568900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182864	chrX	-	3837	10	NIC	ENSMUSG00000031150.14	novel	3658	10	NA	NA	-1	0	intron_retention	TRUE	canonical	3	16	junction_9	8.46926177784867	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATTGAGTCTCTGTCTG	NA	False	NA	-4	True	AATAAA	-14	NA	7617145	7597952	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_-_7600338_7601310_7601410_7601539_7601715_7602012_7602076_7602930_7603217_7603537_7603679_7604132_7604267_7604400_7604492_7604608_7604763_7616836
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182877	chrX	+	2950	10	NIC	ENSMUSG00000000134.18	novel	6328	7	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	90.0647229551485	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTCTCCCGTTCTTGTT	NA	False	NA	25	True	AATAAA	-36	NA	7628793	7641441	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_7628870_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182882	chrX	+	3378	10	FSM	ENSMUSG00000000134.18	ENSMUST00000077680.10	3277	10	-101	0	-3	0	multi-exon	FALSE	canonical	3	227	junction_1	30.4046780026437	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTCTCCCGTTCTTGTT	NA	False	NA	25	True	AATAAA	-36	NA	7628795	7641441	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_7629300_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182902	chrX	+	2919	10	NIC	ENSMUSG00000000134.18	novel	2943	10	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	87.2919042249043	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTCTCCCGTTCTTGTT	NA	False	NA	25	True	AATAAA	-36	NA	7630192	7641441	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_7630238_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182916	chrX	+	2923	25	FSM	ENSMUSG00000031153.17	ENSMUST00000065932.14	3156	25	229	4	0	0	multi-exon	FALSE	canonical	2	42	junction_24	10.7256669049321	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTCTGGTCTCATTCT	3259	False	NA	7	True	NA	NA	NA	7656232	7686802	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7660526_7661230_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182948	chrX	+	2545	10	FSM	ENSMUSG00000031154.16	ENSMUST00000115668.10	2543	10	-2	0	-2	0	multi-exon	FALSE	canonical	3	78	junction_1	125.359138399428	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTCTATTCTGTGTGGG	NA	False	NA	10	True	AATAAA	-22	NA	7708318	7741529	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_7708708_7708836_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182952	chrX	+	4105	8	NIC	ENSMUSG00000031154.16	novel	4259	9	NA	NA	-2	2	intron_retention	FALSE	canonical	3	377	junction_7	51.3459654039663	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTATCTTGTTTGTGTGTGT	NA	False	NA	18	True	AATAAA	-27	NA	7708318	7742861	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182985	chrX	-	1093	7	FSM	ENSMUSG00000031157.11	ENSMUST00000033497.9	1104	7	10	1	10	-1	multi-exon	FALSE	canonical	3	139	junction_6	154.654902569847	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGAGGCTTGAGTGCTT	306	False	NA	-2	True	AATAAA	-21	NA	7765498	7760758	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765407
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182987	chrX	-	1044	7	FSM	ENSMUSG00000031157.11	ENSMUST00000156741.8	763	7	-7	-274	-7	-1	multi-exon	FALSE	canonical	3	64	junction_6	182.287014226345	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGAGGCTTGAGTGCTT	558	False	NA	-2	True	AATAAA	-21	NA	7765246	7760758	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765204
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182990	chrX	-	1207	7	FSM	ENSMUSG00000031157.11	ENSMUST00000115655.8	1148	7	4	-63	4	-1	multi-exon	FALSE	canonical	3	349	junction_6	78.4950458450864	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGAGGCTTGAGTGCTT	590	False	NA	-2	True	AATAAA	-21	NA	7765214	7760758	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765009
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000182992	chrX	-	1124	7	NIC	ENSMUSG00000031157.11	novel	1148	7	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	3	70	junction_6	180.072824774373	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGAGGCTTGAGTGCTT	664	False	NA	-2	True	AATAAA	-21	NA	7765140	7760758	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765018
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183010	chrX	+	897	6	FSM	ENSMUSG00000031158.12	ENSMUST00000033498.10	2381	6	0	1484	0	-103	multi-exon	FALSE	canonical	3	843	junction_3	44.2511016812011	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGTCTGCCTTCAGT	1189	False	NA	31	True	TTTAAA	-18	NA	7765595	7773106	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_7765709_7767199_7767300_7769911_7769976_7772309_7772439_7772519_7772631_7772726
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183026	chrX	-	4013	29	FSM	ENSMUSG00000031161.16	ENSMUST00000115642.8	4069	29	56	0	5	0	multi-exon	FALSE	canonical	3	285	junction_28	46.7627942767691	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGCTTTTTTTTTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	7814072	7796358	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813888
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183032	chrX	-	4082	29	FSM	ENSMUSG00000031161.16	ENSMUST00000033501.15	4142	29	62	-2	11	0	multi-exon	FALSE	canonical	3	77	junction_28	71.4613049995933	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGCTTTTTTTTTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	7814066	7796358	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813813
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183058	chrX	-	148	1	Intergenic	novelGene_5614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAGTCAGAAAATAGCC	NA	False	NA	NA	False	NA	NA	NA	7850504	7850356	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_7850400_7850500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183062	chrX	+	145	1	Intergenic	novelGene_5615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAAAGTCTTTGATG	NA	False	NA	NA	False	NA	NA	NA	7864703	7864848	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_7864700_7864800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183070	chrX	-	186	1	Intergenic	novelGene_5616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGCATGGGAAAAAATGAA	NA	False	NA	NA	False	NA	NA	NA	7878262	7878076	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_7878100_7878300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183079	chrX	+	1182	4	FSM	ENSMUSG00000087193.8	ENSMUST00000188632.2	1177	4	-2	-3	-2	0	multi-exon	FALSE	canonical	3	56	junction_1	23.6971634495683	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGGCCACTGGATTTT	NA	False	NA	29	True	TATAAA	-19	NA	7917827	7939198	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_7917897_7926454_7926526_7936874_7937304_7938585
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183117	chrX	-	1225	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115615.9	1183	7	-40	-2	-4	0	multi-exon	FALSE	canonical	3	391	junction_1	305.254766092558	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGATAATGCTTTTTCCT	6495	False	NA	-7	True	ATTAAA	-25	NA	8012002	8008597	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_8009195_8009485_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183118	chrX	-	1228	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115617.10	1152	7	-67	-9	-4	0	multi-exon	FALSE	canonical	3	391	junction_1	339.486213105759	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGATAATGCTTTTTCCT	6495	False	NA	-7	True	ATTAAA	-25	NA	8012002	8008597	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_8009195_8009485_8009572_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183122	chrX	-	1224	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115616.8	1225	7	10	-9	-4	0	multi-exon	FALSE	canonical	3	529	junction_2	255.122192945524	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGATAATGCTTTTTCCT	6495	False	NA	-7	True	ATTAAA	-25	NA	8012002	8008597	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_8009195_8009489_8009572_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183123	chrX	-	1221	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115621.9	1338	7	117	0	-4	0	multi-exon	FALSE	canonical	3	764	junction_2	192.247597875471	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGATAATGCTTTTTCCT	6495	False	NA	-7	True	ATTAAA	-25	NA	8012002	8008597	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_8009195_8009489_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183174	chrX	-	1208	4	NIC	ENSMUSG00000031168.15	novel	1743	5	NA	NA	27	0	intron_retention	FALSE	canonical	3	780	junction_2	7.25718035235908	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGAGAGATATTTAATTA	NA	False	NA	-5	True	AATAAA	-17	NA	8059110	8051569	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_-_8052073_8052882_8053159_8056317_8056676_8059039
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183180	chrX	-	1833	13	FSM	ENSMUSG00000031169.14	ENSMUST00000089402.10	1839	13	8	-2	-2	0	multi-exon	TRUE	canonical	3	57	junction_2	6.61857655055493	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCGGTTTTTTGGTTTTT	1996	False	NA	0	True	AATAAA	-19	NA	8072732	8060086	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_8060517_8064213_8064325_8065305_8065392_8065469_8065534_8065624_8065702_8067414_8067516_8067682_8067809_8069397_8069529_8069607_8069790_8070030_8070075_8070434_8070628_8071803_8071973_8072613
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183191	chrX	-	187	1	Intergenic	novelGene_5617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATTATGTCAAAA	8364	False	NA	NA	False	AATAAA	-8	NA	8082104	8081917	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_8081900_8082100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183197	chrX	-	299	1	Intergenic	novelGene_5618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCTTTTTGTTTCCGA	NA	False	NA	NA	False	AATAAA	-6	NA	8092569	8092270	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_8092300_8092600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183205	chrX	+	182	1	Intergenic	novelGene_5619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGGGTGTCTCTCCCTGA	NA	False	NA	NA	False	NA	NA	NA	8097427	8097609	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_8097400_8097600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183216	chrX	-	1674	13	FSM	ENSMUSG00000031171.12	ENSMUST00000033513.10	3425	13	1	1750	1	2	multi-exon	FALSE	canonical	3	43	junction_4	72.5114933418604	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCACGTTGCTTACTTTT	NA	False	NA	-12	True	AATAAA	-23	NA	8118644	8106656	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111895_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183221	chrX	-	1667	13	FSM	ENSMUSG00000031171.12	ENSMUST00000115595.8	1656	13	-11	0	0	0	multi-exon	FALSE	canonical	3	233	junction_4	23.6231995198694	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGCACGTTGCTTACTT	NA	False	NA	-14	True	AATAAA	-21	NA	8118645	8106658	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111889_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183229	chrX	+	203	1	Intergenic	novelGene_5620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTAATTTGTCTAAAAAT	NA	False	NA	NA	False	TTTAAA	-2	NA	8107226	8107429	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_8107200_8107400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183239	chrX	-	234	1	Intergenic	novelGene_5621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCACAGGACTTGCAATGT	NA	False	NA	NA	False	AAAAAG	-9	NA	8153466	8153232	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_8153200_8153500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183243	chrX	-	181	1	Intergenic	novelGene_5622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGATGTAGAAGTCT	NA	False	NA	NA	False	NA	NA	NA	8155771	8155590	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_8155600_8155800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183248	chrX	+	100	1	Intergenic	novelGene_5623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTTAGCTCCTTGGGTA	NA	False	NA	NA	False	NA	NA	NA	8245090	8245190	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_8245100_8245200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183262	chrX	-	854	1	FSM	ENSMUSG00000078206.2	ENSMUST00000105004.2	856	1	-3	5	-3	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGTATCAAGTTGATGT	NA	False	NA	NA	False	AATAAA	-26	NA	8852997	8852143	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_8852100_8853000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183270	chrX	+	843	1	FSM	ENSMUSG00000072249.4	ENSMUST00000097029.4	847	1	-1	5	-1	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAGTATCAAATTGATGC	NA	False	NA	25	True	AATAAA	-25	NA	8929252	8930095	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_8929300_8930100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183279	chrX	-	176	1	Intergenic	novelGene_5624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAAAGAGATACATT	NA	False	NA	NA	False	NA	NA	NA	9143706	9143530	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_9143500_9143700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183282	chrX	-	1129	2	Intergenic	novelGene_5625	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	34	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTGGTTGCGTCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	9198865	9195213	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_9196165_9198687
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183288	chrX	-	2137	5	FSM	ENSMUSG00000031176.9	ENSMUST00000033519.3	2176	5	39	0	39	0	multi-exon	FALSE	canonical	3	232	junction_4	27.1523479647709	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGGCTCTGGTTGATCC	NA	False	NA	-1	True	AATAAA	-21	NA	9529203	9520505	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_9522303_9522618_9522697_9523279_9523404_9527218_9527261_9529107
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183298	chrX	-	2726	17	FSM	ENSMUSG00000031174.18	ENSMUST00000073392.11	2926	17	201	-1	14	1	multi-exon	FALSE	canonical	3	77	junction_1	17.609368067878	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGCTTGGAAGTATTTA	NA	False	NA	1	True	AATAAA	-33	NA	10082958	10024453	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_10025120_10028840_10028930_10030960_10031019_10032314_10032516_10044509_10044576_10048193_10048292_10061056_10061223_10062210_10062394_10065149_10065275_10068248_10068405_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082790
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183314	chrX	+	1769	8	FSM	ENSMUSG00000058254.13	ENSMUST00000076354.13	1733	8	-37	1	-37	-1	multi-exon	FALSE	canonical	3	58	junction_5	9.20736173961258	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTGTGGTTTTCTTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	10351359	10462843	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_10351478_10445553_10445743_10448403_10448479_10450280_10450377_10451735_10451892_10456374_10456459_10461517_10461594_10461868
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183326	chrX	+	1975	2	FSM	ENSMUSG00000008035.13	ENSMUST00000008179.7	2019	2	56	-12	-22	12	multi-exon	FALSE	canonical	3	265	junction_1	0	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGTGTGTTGCTCTTTA	1535	False	NA	NA	False	AATAAA	-27	NA	10583684	10585941	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_10583944_10584225
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183357	chrX	+	192	1	Intergenic	novelGene_5626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACACTAGCACCAGAGAAC	NA	False	NA	NA	False	NA	NA	NA	12187274	12187466	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_12187300_12187500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183368	chrX	+	178	1	Intergenic	novelGene_5627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGAGTGAGCGAGGTCC	NA	False	NA	NA	False	NA	NA	NA	12395483	12395661	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_12395500_12395700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183373	chrX	-	189	1	Intergenic	novelGene_5628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCTTTGACTGAAGCAG	NA	False	NA	NA	False	NA	NA	NA	12421899	12421710	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_12421700_12421900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183376	chrX	+	2363	9	FSM	ENSMUSG00000031007.3	ENSMUST00000033313.3	2324	9	-37	-2	-37	2	multi-exon	FALSE	canonical	3	980	junction_3	62.8369666279333	337	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGTTACAGTTTTATTT	NA	False	NA	86	True	AATAAA	-21	NA	12454002	12483290	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183389	chrX	+	197	1	Intergenic	novelGene_5629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATACACTGGGACTCAC	NA	False	NA	NA	False	NA	NA	NA	12513530	12513727	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_12513500_12513700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183399	chrX	+	210	1	Intergenic	novelGene_5630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTAAATTTCTGCATGTTT	NA	False	NA	NA	False	AATAAA	-13	NA	12517888	12518098	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_12517900_12518100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183404	chrX	-	2607	7	FSM	ENSMUSG00000044148.7	ENSMUST00000060108.7	2699	7	94	-2	94	2	multi-exon	FALSE	canonical	3	210	junction_4	24.9377001523575	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACAGTTTTTAATTTCAA	NA	False	NA	-1	True	AATAAA	-27	NA	12539813	12521115	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_12522726_12524100_12524264_12528888_12529069_12530738_12530889_12535765_12535886_12539264_12539400_12539564
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183417	chrX	-	3144	7	NNC	ENSMUSG00000044148.7	novel	2699	7	NA	NA	104	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	81.2617512869506	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTACAGTTTTTAATTTC	NA	False	NA	-3	True	AATAAA	-25	NA	12539803	12521117	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_-_12523275_12524100_12524264_12528888_12529069_12530738_12530889_12535765_12535886_12539264_12539400_12539564
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183423	chrX	+	179	1	Intergenic	novelGene_5631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGTTAGAATGTT	NA	False	NA	NA	False	NA	NA	NA	12533638	12533817	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_12533600_12533800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183444	chrX	+	177	1	Intergenic	novelGene_5632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTAAAATTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	12635732	12635909	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_12635700_12635900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183455	chrX	-	177	1	Intergenic	novelGene_5633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAAGTAAATATCTTT	NA	False	NA	NA	False	NA	NA	NA	12797448	12797271	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_12797300_12797400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183462	chrX	+	1908	1	FSM	ENSMUSG00000083307.2	ENSMUST00000121924.2	1257	1	-237	-414	-237	414	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGGTCTCTGTGTGTT	NA	False	NA	10	True	AATAAA	-35	NA	12802873	12804781	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_12802900_12804800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183474	chrX	+	191	1	Intergenic	novelGene_5634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACCCCCTATGTGTATA	NA	False	NA	NA	False	NA	NA	NA	12871695	12871886	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_12871700_12871900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183480	chrX	+	12036	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-7	0	combination_of_known_junctions	TRUE	canonical	3	383	junction_14	188.080668272361	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTTTCTTTCATTT	800	False	NA	NA	False	AATAAA	-16	NA	12937729	13039567	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183485	chrX	+	12020	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	336	junction_14	190.839489145418	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTTTCTTTCATTT	801	False	NA	NA	False	AATAAA	-16	NA	12937730	13039567	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183496	chrX	+	10106	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-5	1037	intron_retention	FALSE	canonical	3	383	junction_13	181.435749789431	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCCTGTGGTATGT	818	False	NA	NA	False	AATAGA	-18	NA	12937747	13037174	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183512	chrX	+	177	1	Intergenic	novelGene_5635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAAGTGACTTTGCT	NA	False	NA	NA	False	NA	NA	NA	13021421	13021598	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_13021400_13021600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183526	chrX	+	1329	1	FSM	ENSMUSG00000084349.4	ENSMUST00000120557.2	1210	1	-29	-90	-29	90	mono-exon	FALSE	NA	NA	NA	NA	NA	9119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTGAACACAACTCTTGA	NA	False	NA	NA	False	AATAAA	-45	NA	13068780	13070109	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_13068800_13070100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183534	chrX	+	184	1	Intergenic	novelGene_5636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAAGGCCCTGCACTATC	NA	False	NA	NA	False	NA	NA	NA	13083430	13083614	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_13083400_13083600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183544	chrX	+	4674	17	FSM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	18	0	18	0	multi-exon	TRUE	canonical	3	179	junction_1	98.1322449554681	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCGTTTGATTGTCCAT	NA	False	NA	18	True	AATAAA	-18	NA	13147226	13160291	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_13147397_13150416_13150475_13151153_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183571	chrX	+	178	1	Intergenic	novelGene_5637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGTTTTAAACCCC	NA	False	NA	NA	False	NA	NA	NA	13534674	13534852	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_13534700_13534900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183579	chrX	+	103	1	Intergenic	novelGene_5638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGGTCTGTACTGAACAA	NA	False	NA	NA	False	AATAAA	-7	NA	14834524	14834627	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_14834500_14834600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183581	chrX	+	3222	15	FSM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	-1129	2074	-1129	-2074	multi-exon	FALSE	canonical	3	197	junction_7	23.3440330181188	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTGTAGCATCCAATG	NA	False	NA	10	True	AATAAA	-20	NA	16484807	16551983	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_16486153_16500420_16500516_16505302_16505441_16524806_16524912_16525683_16525776_16528555_16528698_16530889_16531040_16531890_16532051_16539085_16539183_16543793_16543848_16547052_16547111_16548439_16548538_16550202_16550315_16551220_16551284_16551470
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183603	chrX	-	2924	5	FSM	ENSMUSG00000025040.14	ENSMUST00000026016.13	1983	5	23	-964	23	964	multi-exon	TRUE	canonical	3	209	junction_3	21.435951110226	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGGCGTCAGAAGTATT	NA	False	NA	NA	False	ACTAAA	-16	NA	17438541	17421838	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_17424251_17424919_17425049_17434271_17434348_17437541_17437699_17438391
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183613	chrX	+	198	1	Intergenic	novelGene_5639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATCGACTTACCTGTTTG	NA	False	NA	NA	False	NA	NA	NA	17633638	17633836	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_17633600_17633800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183621	chrX	+	5454	29	FSM	ENSMUSG00000037369.18	ENSMUST00000044484.13	5918	29	45	419	-17	-419	multi-exon	FALSE	canonical	3	111	junction_13	32.5682955886706	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTCTATTGTTTGAGT	NA	False	NA	5	True	ATTAAA	-18	NA	18028858	18145756	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183633	chrX	-	182	1	Intergenic	novelGene_5640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGAGAATATGAGAACTT	NA	False	NA	NA	False	NA	NA	NA	19569478	19569296	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_19569300_19569500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183635	chrX	+	202	1	Intergenic	novelGene_5641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATAGGTGTGGAACACAT	NA	False	NA	NA	False	NA	NA	NA	20190000	20190202	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_20190000_20190200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183644	chrX	-	204	1	Intergenic	novelGene_5642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATACATATTTCTGGGGC	NA	False	NA	NA	False	TTTAAA	-3	NA	20206777	20206573	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_20206600_20206800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183655	chrX	-	175	1	Intergenic	novelGene_5643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAAGTGCAGTGGGC	NA	False	NA	NA	False	NA	NA	NA	20255012	20254837	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_20254800_20255000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183663	chrX	+	190	1	Intergenic	novelGene_5644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTTGAGTGTGTATCCT	NA	False	NA	NA	False	NA	NA	NA	20285294	20285484	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_20285300_20285500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183692	chrX	-	347	1	FSM	ENSMUSG00000084830.3	ENSMUST00000117527.2	174	1	-57	-116	-57	116	mono-exon	FALSE	NA	NA	NA	NA	NA	259	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTAGATAAACAATTTAAA	NA	False	NA	NA	False	AATAAA	-21	NA	20447610	20447263	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_20447300_20447600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183722	chrX	+	3408	24	NIC	ENSMUSG00000031060.17	novel	3564	24	NA	NA	-20	1	combination_of_known_junctions	TRUE	canonical	3	108	junction_4	89.4718170663217	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTTCTACTTTCTC	535	False	NA	29	True	AATAAA	-17	NA	20484001	20517128	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20503664_20503896_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183727	chrX	+	3177	23	NIC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	-20	1	combination_of_known_junctions	FALSE	canonical	3	194	junction_9	67.1727297333874	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTTCTACTTTCTC	535	False	NA	29	True	AATAAA	-17	NA	20484001	20517128	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183729	chrX	+	3410	24	FSM	ENSMUSG00000031060.17	ENSMUST00000115374.8	3564	24	142	12	-19	1	multi-exon	FALSE	canonical	3	108	junction_4	93.2983708932913	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTTCTACTTTCTC	536	False	NA	29	True	AATAAA	-17	NA	20484002	20517128	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_20484291_20486212_20486354_20501969_20502154_20503664_20503896_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183752	chrX	-	210	1	Intergenic	novelGene_5645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGGCACTTTTAAGTACA	NA	False	NA	NA	False	NA	NA	NA	20519459	20519249	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_20519200_20519500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183777	chrX	+	3639	26	FSM	ENSMUSG00000001924.16	ENSMUST00000001989.9	4071	26	-9	441	-9	-441	multi-exon	TRUE	canonical	3	2172	junction_1	357.223416925598	1747	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTATGTCTAGAGTTCTC	NA	False	NA	80	True	NA	NA	NA	20529127	20548977	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183798	chrX	+	3122	16	NIC	ENSMUSG00000031065.15	novel	3270	16	NA	NA	17	0	intron_retention	FALSE	canonical	3	24	junction_1	416.044580944559	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	1877	False	NA	18	True	ATTAAA	-20	NA	20554209	20566119	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_20554601_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183804	chrX	+	3146	16	FSM	ENSMUSG00000031065.15	ENSMUST00000033380.7	3120	16	-26	0	-26	0	multi-exon	FALSE	canonical	3	1538	junction_15	84.886172149663	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2298	False	NA	18	True	ATTAAA	-20	NA	20554630	20566119	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183820	chrX	+	3250	16	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	1	0	intron_retention	FALSE	canonical	3	35	junction_2	413.425602604494	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2325	False	NA	18	True	ATTAAA	-20	NA	20554657	20566119	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_20555046_20559562_20559771_20560145_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183835	chrX	+	3352	15	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	24	0	intron_retention	FALSE	canonical	3	1538	junction_14	87.5299365698294	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2348	False	NA	18	True	ATTAAA	-20	NA	20554680	20566119	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183843	chrX	+	3471	21	FSM	ENSMUSG00000031066.11	ENSMUST00000033383.3	3467	21	1	-5	1	5	multi-exon	FALSE	canonical	3	183	junction_13	34.5694590643244	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTTGAGTGTTTATTA	NA	False	NA	8	True	NA	NA	NA	20570145	20586783	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183860	chrX	+	185	1	Intergenic	novelGene_5646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTACATGGGGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	20595824	20596009	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_20595800_20596000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183888	chrX	-	3172	13	FSM	ENSMUSG00000037217.16	ENSMUST00000115345.8	3261	13	86	3	0	1	multi-exon	FALSE	canonical	3	14	junction_1	11.6198465279595	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTCTGTGCTTCTTGGTA	NA	False	NA	-1	True	AATAAA	-18	NA	20787157	20726752	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_20727811_20728737_20729330_20729421_20729510_20729822_20729970_20730999_20731103_20731193_20731269_20731357_20731501_20732084_20732148_20773315_20773406_20774189_20774347_20775575_20775668_20775763_20775822_20786651
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183898	chrX	-	187	1	Intergenic	novelGene_5647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGTGTGGAATA	NA	False	NA	NA	False	NA	NA	NA	20733080	20732893	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_20732900_20733100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183911	chrX	+	876	6	FSM	ENSMUSG00000001131.12	ENSMUST00000115342.10	883	6	7	0	7	0	multi-exon	FALSE	canonical	3	578	junction_1	90.9382207875215	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATATTTCTGTATAGTGT	NA	False	NA	16	True	AATAAA	-17	NA	20736411	20740972	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_20736564_20737272_20737402_20739015_20739096_20739288_20739416_20739606_20739732_20740709
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183918	chrX	+	810	6	FSM	ENSMUSG00000001131.12	ENSMUST00000009530.5	833	6	21	2	21	0	multi-exon	FALSE	canonical	3	257	junction_1	211.264384125673	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATATTTCTGTATAGTGT	NA	False	NA	16	True	AATAAA	-17	NA	20736480	20740972	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_20736564_20737269_20737402_20739015_20739096_20739288_20739416_20739606_20739732_20740709
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183936	chrX	-	2799	6	FSM	ENSMUSG00000009406.14	ENSMUST00000009550.14	3548	6	-12	761	-12	-761	multi-exon	FALSE	canonical	3	96	junction_1	13.1666244725062	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGGTATTTTTTTTTC	NA	False	NA	-1	True	AATATA	-24	NA	20816859	20800394	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_20801788_20801869_20801972_20802470_20802903_20803355_20803803_20807792_20808037_20816678
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183943	chrX	-	606	7	FSM	ENSMUSG00000001134.10	ENSMUST00000123836.2	875	7	8	261	8	0	multi-exon	FALSE	canonical	3	501	junction_1	60.2699943771544	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATAGTCCTTTTTTCCC	NA	False	NA	-8	True	ATTAAA	-20	NA	20828248	20818161	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_20818263_20818446_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827918_20828026_20828172
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183958	chrX	+	1040	5	NNC	ENSMUSG00000086877.8	novel	1412	4	NA	NA	0	612	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_3	26.8048503073604	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCATGGTCATTGTGTT	NA	False	NA	7	True	NA	NA	NA	20828352	20853588	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_+_20828835_20833967_20834048_20851664_20851705_20852228_20852400_20853321
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000183977	chrX	+	219	1	Intergenic	novelGene_5648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1220	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCCATGGAAGGAGTTACA	NA	False	NA	NA	False	NA	NA	NA	21338590	21338809	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_21338600_21338800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184000	chrX	-	3222	8	ISM	ENSMUSG00000036782.14	ENSMUST00000115313.8	3251	9	3387	13	3358	1	3prime_fragment	TRUE	canonical	3	772	junction_6	153.107671864193	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCTGTGCCATGCCGT	NA	False	NA	-21	True	AATAAA	-16	NA	23227934	23085522	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181368_23181441_23227732
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184001	chrX	-	3288	9	NIC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	3358	1	combination_of_known_junctions	FALSE	canonical	3	201	junction_6	366.28779668452	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCTGTGCCATGCCGT	NA	False	NA	-21	True	AATAAA	-16	NA	23227934	23085522	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23160453_23160520_23181368_23181441_23227732
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184009	chrX	-	3334	9	NNC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	3358	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	453.810515936993	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	-22	True	AATAAA	-15	NA	23227934	23085523	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23150798_23150912_23181368_23181441_23227732
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184011	chrX	-	3250	9	NNC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	3358	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_7	450.770382234681	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	-22	True	AATAAA	-15	NA	23227934	23085523	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181368_23181441_23225889_23225919_23227732
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184013	chrX	-	3341	8	NNC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	-3755	0	at_least_one_novel_splicesite	FALSE	canonical	3	222	junction_7	307.654590309938	71	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	-22	True	AATAAA	-15	NA	23185173	23085523	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181368_23181441_23184851
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184023	chrX	-	3394	9	NNC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	-3742	0	at_least_one_novel_splicesite	FALSE	canonical	3	201	junction_6	415.817192405509	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	-22	True	AATAAA	-15	NA	23185160	23085523	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23160453_23160520_23181368_23181441_23184851
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184044	chrX	+	4201	20	FSM	ENSMUSG00000036769.15	ENSMUST00000035766.13	4167	20	-22	-12	-22	12	multi-exon	FALSE	canonical	3	33	junction_8	9.86248944541599	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGTCTTAATTTGACTT	NA	False	NA	NA	False	AATAAA	-1	NA	23559267	23672241	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_23559779_23598556_23598591_23616144_23616220_23622678_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184063	chrX	+	6865	54	NIC	ENSMUSG00000031093.15	novel	6665	53	NA	NA	-159	2	combination_of_known_junctions	TRUE	canonical	1	53	junction_53	22.4821593760484	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCGAAGTGAAGGAAATAAT	NA	False	NA	10	True	AATAAA	-22	NA	35152325	35340217	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35273595_35273635_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333640_35339751
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184090	chrX	+	216	1	Intergenic	novelGene_5649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCAGGACTATAGCTGGG	NA	False	NA	NA	False	NA	NA	NA	35786674	35786890	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_35786700_35786900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184096	chrX	+	1900	3	FSM	ENSMUSG00000006373.11	ENSMUST00000073339.7	1857	3	-39	-4	-39	4	multi-exon	FALSE	canonical	3	454	junction_1	42	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCTTTCATTTTTTAA	1629	False	NA	NA	False	AATAAA	-19	NA	35861819	35869736	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_35862268_35865773_35865930_35868440
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184125	chrX	-	207	1	Intergenic	novelGene_5650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGTTGATAAAGAAGATT	NA	False	NA	NA	False	NA	NA	NA	36030582	36030375	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_36030400_36030600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184140	chrX	+	1647	3	NIC	ENSMUSG00000016319.4	novel	1240	4	NA	NA	-1	0	intron_retention	FALSE	canonical	3	11014	junction_2	796	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTCGTTGTTTGTTT	NA	False	NA	29	True	AATAAA	-31	NA	36059302	36062460	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_36059495_36060495_36061530_36062039
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184157	chrX	-	3314	7	FSM	ENSMUSG00000006423.16	ENSMUST00000115248.10	3340	7	26	0	18	0	multi-exon	FALSE	canonical	3	146	junction_1	34.0999348321306	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTGTTTTGATCATTT	NA	False	NA	NA	False	AATAAA	-28	NA	36127873	36112195	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_36114816_36116291_36116385_36116982_36117073_36117935_36118075_36120504_36120547_36127276_36127395_36127661
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184168	chrX	+	1701	6	FSM	ENSMUSG00000016308.13	ENSMUST00000016452.11	1732	6	35	-4	-1	4	multi-exon	FALSE	canonical	3	837	junction_1	46.7435557055729	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCACACTTTTATTAACTT	NA	False	NA	11	True	AATAAA	-20	NA	36137982	36147879	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_36138183_36138363_36138445_36138819_36138846_36145309_36145400_36146251_36146341_36146664
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184176	chrX	-	166	1	Intergenic	novelGene_5651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGACAGTATATGAGCACT	NA	False	NA	NA	False	NA	NA	NA	36149819	36149653	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_36149700_36149800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184195	chrX	+	187	1	Intergenic	novelGene_5652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGAGACAGAATCTCA	2144	False	NA	NA	False	NA	NA	NA	36330574	36330761	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_36330600_36330800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184196	chrX	-	180	1	Intergenic	novelGene_5653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATATTTATCTATATAC	NA	False	NA	NA	False	NA	NA	NA	36338109	36337929	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_36337900_36338100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184206	chrX	+	177	1	Intergenic	novelGene_5654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGAGTGAGCGGGATT	2631	False	NA	NA	False	NA	NA	NA	36339338	36339515	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_36339300_36339500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184210	chrX	+	207	1	Intergenic	novelGene_5655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGACAGAATCTATGTAGC	7516	False	NA	NA	False	NA	NA	NA	36344223	36344430	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_36344200_36344400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184236	chrX	-	2341	10	FSM	ENSMUSG00000036572.17	ENSMUST00000076265.13	2344	10	3	0	3	0	multi-exon	FALSE	canonical	3	68	junction_3	69.0213779729436	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCGTTTATTTATTCAAG	NA	False	NA	-1	True	AATAAA	-24	NA	36373972	36355330	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_36356315_36359174_36359476_36360510_36360672_36363159_36363343_36363745_36363790_36365679_36365791_36368081_36368181_36372567_36372675_36372800_36372908_36373728
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184250	chrX	-	212	1	Intergenic	novelGene_5656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTTGGGGATCACCACAA	NA	False	NA	NA	False	NA	NA	NA	36385162	36384950	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_36385000_36385200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184259	chrX	+	4234	9	FSM	ENSMUSG00000016409.5	ENSMUST00000016553.5	4230	9	-7	3	-7	-3	multi-exon	TRUE	canonical	3	360	junction_3	33.4381425171914	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATATTTTTAATGTGTGG	NA	False	NA	21	True	AATAAA	-21	NA	36390440	36414396	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_36391029_36394630_36394712_36400164_36400236_36400404_36400546_36403329_36403394_36405290_36405401_36405489_36405566_36406557_36406708_36411443
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184264	chrX	-	434	3	FSM	ENSMUSG00000016427.8	ENSMUST00000016571.8	419	3	-15	0	-15	0	multi-exon	FALSE	canonical	3	2951	junction_1	110	343	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTTTTATTTTTATGAA	2297	False	NA	-1	True	AATAAA	-20	NA	36454831	36451240	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_36451395_36453526_36453617_36454641
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184276	chrX	+	1246	1	FSM	ENSMUSG00000036537.7	ENSMUST00000046433.7	1223	1	-23	0	-23	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCTTTCTTTCTTTCT	NA	False	NA	21	True	AATAAA	-21	NA	36454874	36456120	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_36454900_36456100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184299	chrX	-	775	1	FSM	ENSMUSG00000080241.4	ENSMUST00000116499.4	451	1	-100	-224	-100	224	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTTCTAATTTCCAGAAA	NA	False	NA	-17	True	AATAAA	-22	NA	36807850	36807075	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_36807100_36807800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184309	chrX	+	903	6	FSM	ENSMUSG00000095180.11	ENSMUST00000184866.10	893	6	-8	-2	-8	-1	multi-exon	FALSE	canonical	3	2792	junction_1	493.533626007388	265	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAGTGATTCGAGTAATA	8497	False	NA	19	True	ATTAAA	-16	NA	36891627	36897310	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_36891707_36892583_36892653_36893274_36893357_36893532_36893891_36894500_36894547_36897041
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184320	chrX	+	875	4	FSM	ENSMUSG00000006200.4	ENSMUST00000006362.4	1010	4	135	0	135	0	multi-exon	FALSE	canonical	3	92	junction_1	47.588514020367	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGCTCCATTGTCTTGG	NA	False	NA	14	True	AATAAA	-18	NA	36915921	36918734	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_36916057_36916242_36916703_36917291_36917338_36918500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184325	chrX	-	844	4	FSM	ENSMUSG00000068048.9	ENSMUST00000089062.8	882	4	38	0	-28	0	multi-exon	FALSE	canonical	3	53	junction_2	21.013223349966	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGGCTCCATTATCTT	1116	False	NA	-1	True	AATAAA	-16	NA	36990609	36987973	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_36988177_36989156_36989203_36989828_36990289_36990474
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184347	chrX	-	3615	9	FSM	ENSMUSG00000016534.16	ENSMUST00000061755.9	3604	9	-6	-5	-6	5	multi-exon	FALSE	canonical	3	893	junction_3	45.9604109533411	708	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTCACATTTTTTCCCA	NA	False	NA	-17	True	AATAAA	-24	NA	37545337	37508378	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184360	chrX	+	181	1	Intergenic	novelGene_5657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGCTGTAGGCAAGCCTA	NA	False	NA	NA	False	NA	NA	NA	37605560	37605741	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_37605600_37605700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184389	chrX	-	1472	2	FSM	ENSMUSG00000048970.10	ENSMUST00000058265.8	1449	2	-29	6	-29	-6	multi-exon	FALSE	canonical	3	94	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGTTTCTATTACTT	NA	False	NA	-8	True	ATTAAA	-12	NA	37723993	37719667	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_37721001_37723854
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184395	chrX	+	450	1	FSM	ENSMUSG00000080896.6	ENSMUST00000117155.2	174	1	-30	-246	-30	246	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGTACATATATACAATG	NA	False	NA	NA	False	ATTAAA	-24	NA	38058663	38059113	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_38058700_38059100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184397	chrX	+	214	1	Intergenic	novelGene_5658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGGATCACACTTTGGA	NA	False	NA	NA	False	NA	NA	NA	38487876	38488090	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_38487900_38488100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184401	chrX	+	186	1	Intergenic	novelGene_5659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATTTCTCCATCATCAA	NA	False	NA	NA	False	NA	NA	NA	39200861	39201047	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_39200900_39201000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184410	chrX	+	6399	8	FSM	ENSMUSG00000025860.16	ENSMUST00000115094.8	6542	8	151	-8	69	8	multi-exon	FALSE	canonical	3	44	junction_1	28.7345344383332	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTTGTATTTGATTTG	NA	False	NA	26	True	AATAAA	-22	NA	41156863	41198541	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_41156934_41157233_41157360_41183243_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184422	chrX	+	193	1	Intergenic	novelGene_5660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACTGTTGGTTATGAAAA	NA	False	NA	NA	False	TTTAAA	-3	NA	41169893	41170086	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_41169900_41170100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184436	chrX	-	194	1	Intergenic	novelGene_5661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGACGAAAGTACTC	NA	False	NA	NA	False	NA	NA	NA	41220205	41220011	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_41220000_41220200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184450	chrX	+	5838	33	FSM	ENSMUSG00000025862.15	ENSMUST00000069619.14	5825	33	-19	6	-19	4	multi-exon	FALSE	canonical	3	102	junction_1	27.0432957264827	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTATGCTTTATCTCTT	NA	False	NA	13	True	AATAAA	-16	NA	41239558	41366056	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184463	chrX	+	205	1	Intergenic	novelGene_5662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	316	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCAACTTTAAAGATCCT	NA	False	NA	NA	False	NA	NA	NA	42542422	42542627	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_42542400_42542600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184478	chrX	+	210	1	Intergenic	novelGene_5663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAGACCCTCTAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	45509222	45509432	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_45509200_45509400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184486	chrX	+	199	1	Intergenic	novelGene_5664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATGGAATGCACCCAGA	NA	False	NA	NA	False	NA	NA	NA	47048587	47048786	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_47048600_47048800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184489	chrX	-	3210	3	FSM	ENSMUSG00000037010.8	ENSMUST00000039026.8	3149	3	-61	0	-61	0	multi-exon	FALSE	canonical	2	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCCCATCTGTCTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	47123791	47114022	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_47116585_47117170_47117343_47123315
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184496	chrX	+	205	1	Intergenic	novelGene_5665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTATTTTGCTCCCATA	NA	False	NA	NA	False	NA	NA	NA	47298851	47299056	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_47298900_47299100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184505	chrX	+	2548	15	FSM	ENSMUSG00000063785.13	ENSMUST00000080713.5	2507	15	-36	-5	-36	5	multi-exon	FALSE	canonical	3	320	junction_8	49.1840047833705	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCTTCTGTATTATCTAT	NA	False	NA	25	True	AATAAA	-29	NA	47345702	47371335	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47361676_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184517	chrX	+	188	1	Intergenic	novelGene_5666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGAAAGTGGTCCA	NA	False	NA	NA	False	NA	NA	NA	47351940	47352128	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_47351900_47352100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184527	chrX	-	6209	9	FSM	ENSMUSG00000031103.13	ENSMUST00000114958.8	6088	9	-125	4	-125	-1	multi-exon	FALSE	canonical	3	68	junction_6	6.29359793758705	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGTGTTCAGATTCCAA	NA	False	NA	-2	True	NA	NA	NA	47543171	47499926	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_47504324_47505523_47505902_47506747_47506941_47507031_47507116_47507884_47508077_47509152_47509246_47509580_47509753_47512954_47513232_47542748
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184534	chrX	-	2229	16	FSM	ENSMUSG00000036932.15	ENSMUST00000037349.8	2237	16	9	-1	5	1	multi-exon	FALSE	canonical	3	1039	junction_9	82.1482129378898	511	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTGTTTTATTTTAAA	NA	False	NA	0	True	ATTAAA	-17	NA	47602431	47563819	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184549	chrX	-	177	1	Intergenic	novelGene_5667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAGTGAGGTGAG	NA	False	NA	NA	False	NA	NA	NA	47565318	47565141	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_47565100_47565300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184555	chrX	+	173	2	Intergenic	novelGene_5668	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTTTTAAAAAAACATTGA	NA	False	NA	NA	False	NA	NA	NA	47586499	47624356	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_47586646_47624329
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184588	chrX	+	1339	10	NIC	ENSMUSG00000031105.17	novel	1760	11	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_7	17.3254968040219	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTGACTTTGTCTTCA	NA	False	NA	14	True	ATTAAA	-17	NA	47712639	47751171	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_47712706_47718128_47718223_47719765_47719914_47723633_47723729_47726266_47726353_47729111_47729208_47740806_47740932_47742243_47742380_47749565_47749647_47750759
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184595	chrX	+	199	1	Intergenic	novelGene_5669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTCAGAGGACTACAGC	NA	False	NA	NA	False	NA	NA	NA	47756024	47756223	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_47756000_47756200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184617	chrX	+	720	1	FSM	ENSMUSG00000082192.3	ENSMUST00000121891.3	340	1	-123	-257	-123	257	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGGCAATCTGCAAATT	NA	False	NA	NA	False	NA	NA	NA	48749713	48750433	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_48749700_48750400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184634	chrX	-	3811	4	NNC	ENSMUSG00000050029.8	novel	3545	3	NA	NA	-755	-374	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_3	34.5671648951558	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGTCTCTTTAATTATT	NA	False	NA	-1	True	AATAAA	-21	NA	50107650	50093162	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_-_50095628_50103847_50104161_50106502_50107328_50107442
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184645	chrX	+	203	1	Intergenic	novelGene_5670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAGCTCTGCTTAAGTTC	NA	False	NA	NA	False	NA	NA	NA	50274854	50275057	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_50274900_50275100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184657	chrX	+	2492	1	Intergenic	novelGene_5671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCGCTGCGCTGCGCTAG	NA	False	NA	NA	False	NA	NA	NA	50291190	50293682	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_50291200_50293700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184662	chrX	-	6936	8	FSM	ENSMUSG00000055780.11	ENSMUST00000069509.4	4120	8	62	-2878	62	2878	multi-exon	FALSE	canonical	3	16	junction_1	4.17475405605784	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCATTGACTCAATAGTTG	NA	False	NA	NA	False	AATAAA	-14	NA	50889959	50839957	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_50846351_50854031_50854113_50882224_50882281_50885803_50885850_50886599_50886704_50887371_50887431_50889689_50889806_50889878
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184689	chrX	+	182	1	Intergenic	novelGene_5672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACACATATTATCAGAGC	NA	False	NA	NA	False	NA	NA	NA	51222437	51222619	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_51222400_51222600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184697	chrX	-	185	1	Intergenic	novelGene_5673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCTTCACTGGAGAATAT	NA	False	NA	NA	False	NA	NA	NA	51299795	51299610	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_51299600_51299800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184705	chrX	-	2285	8	FSM	ENSMUSG00000055653.14	ENSMUST00000069360.14	2216	8	-69	0	-40	0	multi-exon	FALSE	canonical	3	233	junction_6	17.9398086582293	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTTGGTCCTTTTTTAA	NA	False	NA	NA	False	AATAAA	-17	NA	51702867	51361302	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_51361832_51403713_51403874_51454598_51454720_51476985_51477112_51485949_51486084_51517316_51518012_51671673_51671836_51702509
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184716	chrX	+	186	1	Intergenic	novelGene_5674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGCTTAAAAAGATCTAC	NA	False	NA	NA	False	NA	NA	NA	51817034	51817220	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_51817000_51817200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184726	chrX	+	1574	2	FSM	ENSMUSG00000073207.2	ENSMUST00000101588.2	1536	2	-32	-6	-32	6	multi-exon	FALSE	canonical	3	142	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCTGTGATTCTTGAAA	NA	False	NA	NA	False	AATAAA	-29	NA	51880044	51888351	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_51880203_51886935
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184735	chrX	-	968	2	Antisense	novelGene_ENSMUSG00000081684.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCGTGACTTTCTATTCA	NA	False	NA	NA	False	NA	NA	NA	52002292	51987437	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chrX_-_51988384_52002270
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184742	chrX	+	976	1	FSM	ENSMUSG00000081684.5	ENSMUST00000117295.2	882	1	-27	-67	-27	67	mono-exon	FALSE	NA	NA	NA	NA	NA	1997	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCACGGACCACAACTGACA	NA	False	NA	NA	False	AATAAA	-44	NA	51987437	51988413	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_51987400_51988400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184755	chrX	+	220	1	Intergenic	novelGene_5675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATATAGAGCTGGTCAA	NA	False	NA	NA	False	AAAAAG	-10	NA	52019415	52019635	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_52019400_52019600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184763	chrX	+	1370	9	FSM	ENSMUSG00000025630.9	ENSMUST00000026723.9	1289	9	-76	-5	-76	5	multi-exon	FALSE	canonical	3	2155	junction_4	129.05328356923	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAATTCTTTCGTGT	NA	False	NA	17	True	AATAAA	-21	NA	52076937	52110541	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_52077128_52087967_52088075_52090964_52091149_52097529_52097596_52101153_52101172_52105223_52105307_52108981_52109029_52109199_52109277_52109943
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184772	chrX	+	5373	8	NIC	ENSMUSG00000025630.9	novel	1289	9	NA	NA	-31	1	intron_retention	FALSE	canonical	3	2155	junction_4	132.973681606549	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTTTTTGAATTCTTTC	NA	False	NA	13	True	AATAAA	-17	NA	52076982	52110537	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_52077128_52087967_52088075_52090964_52091149_52097529_52097596_52101153_52105307_52108981_52109029_52109199_52109277_52109943
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184796	chrX	-	182	1	Intergenic	novelGene_5676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAATCCAGGAAACCA	1755	False	NA	NA	False	NA	NA	NA	52427088	52426906	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_52426900_52427100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184798	chrX	-	2180	6	FSM	ENSMUSG00000023074.12	ENSMUST00000096447.9	1773	6	7	-414	7	4	multi-exon	FALSE	canonical	3	89	junction_3	3.77359245282264	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTCTCCGTTCATTT	NA	False	NA	0	True	CATAAA	-22	NA	52459372	52433470	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_52434867_52436580_52436743_52444532_52444751_52446286_52446363_52446450_52446705_52459298
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184802	chrX	-	2299	7	NNC	ENSMUSG00000023074.12	novel	1782	7	NA	NA	7	0	intron_retention	FALSE	canonical	1	3	junction_2	42.1056871323683	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTTCTCTCTCCGTTC	NA	False	NA	-4	True	CATAAA	-18	NA	52459372	52433474	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_-_52434867_52436580_52436743_52440547_52440671_52444532_52444751_52446286_52446363_52446450_52446705_52459298
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184825	chrX	+	1584	5	FSM	ENSMUSG00000055555.2	ENSMUST00000069209.2	1427	5	-33	-124	-33	124	multi-exon	FALSE	canonical	3	124	junction_4	18.2397231338636	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGTTTTCCATGATCCCC	NA	False	NA	NA	False	AATAAA	-21	NA	52726759	52740532	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_52727016_52729333_52729516_52735693_52735827_52738241_52738355_52739632
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184836	chrX	-	2772	9	FSM	ENSMUSG00000054727.3	ENSMUST00000067940.3	1224	9	-98	-1450	-98	1450	multi-exon	FALSE	canonical	3	1101	junction_5	153.190241203544	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAAATGCTTGAATATTA	NA	False	NA	NA	False	NA	NA	NA	52759896	52743417	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52749908_52751980_52752016_52752989_52753054_52753476_52753824_52759728
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184839	chrX	-	3316	8	NIC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-12	7	intron_retention	FALSE	canonical	3	1225	junction_3	142.325008917145	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGTATATTTATCACTT	NA	False	NA	-4	True	AGTAAA	-24	NA	52759810	52744860	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52752016_52752989_52753054_52753476_52753824_52759728
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184867	chrX	-	1043	8	FSM	ENSMUSG00000054626.12	ENSMUST00000067763.10	1032	8	-10	-1	0	1	multi-exon	FALSE	canonical	3	95	junction_7	69.0238054173031	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGTGGCAAATAGTCCT	NA	False	NA	NA	False	AATAAA	-14	NA	52799673	52785713	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798236_52799598
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184875	chrX	+	229	1	Intergenic	novelGene_5677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGACTTTATTCCCTCC	NA	False	NA	NA	False	TTTAAA	-11	NA	53255634	53255863	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_53255600_53255900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184887	chrX	-	2428	5	Intergenic	novelGene_5678	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	3.278719262151	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGTGTCAGATTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	55338550	55322445	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_55324058_55325906_55326100_55327526_55327950_55337587_55337708_55338470
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184893	chrX	+	3738	5	FSM	ENSMUSG00000073176.5	ENSMUST00000101560.4	3738	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	8.6421930087218	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTTTCTGATTCTTTTA	NA	False	NA	6	True	AATAAA	-16	NA	55391759	55411034	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_55391800_55393642_55394089_55398822_55399028_55407826_55407941_55408101
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184907	chrX	+	210	1	Intergenic	novelGene_5679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACAAGTTTCAGGACAACA	NA	False	NA	NA	False	NA	NA	NA	55443139	55443349	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_55443100_55443300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184928	chrX	-	179	1	Intergenic	novelGene_5680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAGAAAAGAATTTAAAG	NA	False	NA	NA	False	NA	NA	NA	55522451	55522272	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_55522300_55522500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184948	chrX	+	178	1	Intergenic	novelGene_5681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGATATCTATAT	NA	False	NA	NA	False	NA	NA	NA	55689194	55689372	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_55689200_55689400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184954	chrX	+	2400	7	FSM	ENSMUSG00000023092.17	ENSMUST00000023854.10	2356	7	-44	0	-44	0	multi-exon	FALSE	canonical	3	131	junction_5	4.78423336480244	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTCCTGTCTTTTTATTC	NA	False	NA	12	True	AATAAA	-18	NA	55777102	55838706	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_55777229_55799694_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55835823_55836011_55837203
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184978	chrX	+	193	1	Intergenic	novelGene_5682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATAGGATGCATTGTTAA	NA	False	NA	NA	False	NA	NA	NA	55912446	55912639	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_55912400_55912600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000184985	chrX	+	2888	10	FSM	ENSMUSG00000067873.12	ENSMUST00000088652.6	2810	10	-74	-4	-42	4	multi-exon	FALSE	canonical	3	407	junction_1	40.9980427114861	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGAGTTAACTTGTGTC	NA	False	NA	20	True	AATAAA	-35	NA	56098900	56112547	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_56099126_56099313_56099559_56100857_56101039_56101404_56101453_56101859_56102015_56104245_56104410_56105213_56105314_56109476_56109567_56110365_56110504_56111005
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185003	chrX	+	2738	9	ISM	ENSMUSG00000067873.12	ENSMUST00000088652.6	2810	10	260	0	-23	0	3prime_fragment	FALSE	canonical	3	455	junction_5	31.3996417177012	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGACTTGAGTTAACTTG	NA	False	NA	16	True	AATAAA	-31	NA	56099234	56112543	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chrX_+_56099559_56100857_56101039_56101404_56101453_56101859_56102015_56104245_56104410_56105213_56105314_56109476_56109567_56110365_56110504_56111005
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185010	chrX	+	181	1	Intergenic	novelGene_5683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGAAGTTGGAAAGGTT	3041	False	NA	NA	False	NA	NA	NA	56377860	56378041	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_56377900_56378000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185015	chrX	+	182	1	Intergenic	novelGene_5684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGTCATTCTGAATAAGT	NA	False	NA	NA	False	NA	NA	NA	56424909	56425091	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_56424900_56425100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185030	chrX	-	2321	10	FSM	ENSMUSG00000031134.17	ENSMUST00000140384.8	2139	10	0	-182	0	182	multi-exon	FALSE	canonical	3	61	junction_8	6.66296193358442	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGGTGTTGGGTTCTTT	NA	False	NA	-5	True	AATAAA	-16	NA	56438341	56428707	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_56429922_56430492_56430582_56433420_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423_56435596_56436631_56436739_56436926_56437059_56438211
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185035	chrX	+	2176	17	NNC	ENSMUSG00000079584.3	novel	2156	17	NA	NA	-7	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	151.271641013774	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGCCTCAGTTTCTTT	NA	False	NA	21	True	TATAAA	-14	NA	56454506	56534139	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_+_56454734_56459619_56459688_56461126_56461221_56463018_56463147_56463508_56463639_56467202_56467331_56468624_56468741_56478571_56478649_56481769_56481879_56482743_56482877_56484923_56485044_56485247_56485306_56508440_56508601_56509625_56509775_56513777_56513890_56517713_56517886_56533944
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185045	chrX	+	2176	17	FSM	ENSMUSG00000079584.3	ENSMUST00000114725.3	2156	17	-6	-14	-6	14	multi-exon	FALSE	canonical	1	199	junction_7	106.775300719548	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCCTCAGTTTCTTTGA	NA	False	NA	23	True	TATAAA	-16	NA	56454507	56534141	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_56454734_56459619_56459688_56461126_56461221_56463018_56463147_56463508_56463639_56467202_56467331_56468624_56468737_56478568_56478649_56481769_56481879_56482743_56482877_56484923_56485044_56485247_56485306_56508440_56508601_56509625_56509775_56513777_56513890_56517713_56517886_56533944
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185055	chrX	+	218	1	Intergenic	novelGene_5685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGCTAAGTCAAACTGA	2514	False	NA	NA	False	NA	NA	NA	56795258	56795476	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_56795300_56795500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185058	chrX	+	189	1	Intergenic	novelGene_5686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTGTATTCAGTGGCCA	NA	False	NA	NA	False	NA	NA	NA	56990658	56990847	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_56990700_56990800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185068	chrX	+	208	1	Intergenic	novelGene_5687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGAGCCAGGT	NA	False	NA	NA	False	NA	NA	NA	57017776	57017984	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_57017800_57018000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185072	chrX	+	4038	3	FSM	ENSMUSG00000067860.12	ENSMUST00000088627.11	3949	3	-15	-74	-15	74	multi-exon	FALSE	canonical	3	194	junction_2	9.5	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTAGAGAATTTCTGGTG	9485	False	NA	8	True	AATAAA	-18	NA	57075987	57081993	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_57077598_57078721_57078886_57079729
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185086	chrX	-	166	1	Intergenic	novelGene_5688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATCTCTTGCATAAT	NA	False	NA	NA	False	NA	NA	NA	57113115	57112949	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_57112900_57113100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185088	chrX	+	185	1	Intergenic	novelGene_5689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGATTTTTCTGCCGGG	NA	False	NA	NA	False	NA	NA	NA	57125884	57126069	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_57125900_57126100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185091	chrX	-	183	1	Intergenic	novelGene_5690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATATAGGATCAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57643385	57643202	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_57643200_57643400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185096	chrX	+	1563	2	FSM	ENSMUSG00000046180.12	ENSMUST00000062542.5	1572	2	16	-7	16	7	multi-exon	FALSE	canonical	3	101	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTTTGTTCTTTGGAG	NA	False	NA	20	True	AATAAA	-25	NA	57956836	57965671	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_57956922_57964193
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185104	chrX	-	2523	5	FSM	ENSMUSG00000031137.18	ENSMUST00000033473.12	2499	5	-24	0	-24	0	multi-exon	FALSE	canonical	3	70	junction_2	5.62916512459885	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAACTTCAATGTGTGTT	NA	False	NA	NA	False	AATAAA	-25	NA	58179820	58107504	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_58109030_58112760_58112960_58171253_58171358_58177199_58177311_58179236
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185115	chrX	-	4351	28	FSM	ENSMUSG00000031139.17	ENSMUST00000063507.11	4227	28	-122	-2	-122	2	multi-exon	FALSE	canonical	3	390	junction_27	54.2283947104	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGTTCGTGTATTTG	NA	False	NA	0	True	AATAAA	-31	NA	59224571	59101313	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185122	chrX	-	4392	29	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-87	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_8	138.734807956675	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59224536	59101315	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59126519_59126598_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185130	chrX	-	3812	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	828	0	at_least_one_novel_splicesite	FALSE	canonical	3	198	junction_27	79.0220750182634	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59223621	59101315	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185152	chrX	+	187	1	Intergenic	novelGene_5691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTCATGAAATTCACAG	NA	False	NA	NA	False	NA	NA	NA	59147748	59147935	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_59147700_59147900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185161	chrX	-	2738	15	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	828	-56486	at_least_one_novel_splicesite	FALSE	canonical	3	198	junction_14	93.2665972536004	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTTCTACTTTGTTT	NA	False	NA	-1	True	NA	NA	NA	59223621	59157804	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_-_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185165	chrX	-	3240	15	ISM	ENSMUSG00000031139.17	ENSMUST00000063507.11	4227	28	-87	56489	-87	-56486	5prime_fragment	FALSE	canonical	3	390	junction_14	50.407775963149	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTTCTACTTTGTTT	NA	False	NA	-1	True	NA	NA	NA	59224536	59157804	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chrX_-_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185191	chrX	-	184	1	Intergenic	novelGene_5692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGCTCAAAATTAAATGTT	NA	False	NA	NA	False	NA	NA	NA	59796563	59796379	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_59796400_59796600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185194	chrX	-	2074	1	FSM	ENSMUSG00000045179.10	ENSMUST00000135107.4	2065	1	-9	0	-9	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGAGTCCTGATAATTT	NA	False	NA	0	True	AATAAA	-15	NA	59937045	59934971	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_59935000_59937000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185206	chrX	+	108	1	Intergenic	novelGene_5693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATATTATCCTGAGTGA	NA	False	NA	NA	False	NA	NA	NA	63542412	63542520	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_63542400_63542500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185215	chrX	+	5166	1	Intergenic	novelGene_5694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	288	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTTCTCGTTGGTGATTT	NA	False	NA	NA	False	NA	NA	NA	63977041	63982207	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_63977000_63982200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185235	chrX	+	4338	16	FSM	ENSMUSG00000000838.18_ENSMUSG00002075986.1	ENSMUST00000114657.9	4076	16	-262	0	8	0	multi-exon	FALSE	canonical	3	289	junction_11	161.476190195335	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722154	67761569	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185252	chrX	+	4372	17	FSM	ENSMUSG00000000838.18	ENSMUST00000088546.12	4409	17	37	0	-4	0	multi-exon	FALSE	canonical	3	466	junction_14	131.607237049298	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722183	67761569	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185261	chrX	+	4269	16	Fusion	ENSMUSG00000000838.18_ENSMUSG00002075986.1	novel	4076	16	NA	NA	0	0	multi-exon	FALSE	canonical	3	169	junction_13	205.444883119536	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722187	67761569	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Fusion_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755872_67756020_67756846_67756930_67759170
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185265	chrX	+	4293	17	FSM	ENSMUSG00000000838.18_ENSMUSG00002075986.1	ENSMUST00000114653.2	4058	17	-235	0	0	0	multi-exon	FALSE	canonical	3	204	junction_14	173.862182759075	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722187	67761569	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755911_67756020_67756846_67756930_67759170
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185303	chrX	+	1943	1	FSM	ENSMUSG00000071748.3	ENSMUST00000096420.3	4226	1	11	2272	11	-2272	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTGGAATGAGACACTT	NA	False	NA	NA	False	ATTAAA	-23	NA	67864709	67866652	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_67864700_67866700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185311	chrX	-	838	1	FSM	ENSMUSG00000082926.4	ENSMUST00000120762.2	750	1	-46	-42	-46	42	mono-exon	FALSE	NA	NA	NA	NA	NA	985	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTTTCATTAATAGTGT	NA	False	NA	NA	False	AATAAA	-21	NA	68649897	68649059	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_68649100_68649900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185324	chrX	+	1096	3	FSM	ENSMUSG00000045237.6	ENSMUST00000053981.6	1094	3	0	-2	0	2	multi-exon	FALSE	canonical	3	343	junction_1	1.5	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGTCTAGCTCCCTTT	NA	False	NA	16	True	AATAAA	-23	NA	69429482	69433025	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_69429758_69431499_69431773_69432477
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185337	chrX	-	2513	7	FSM	ENSMUSG00000073139.10	ENSMUST00000114630.3	1307	7	0	-1206	0	0	multi-exon	FALSE	canonical	3	188	junction_5	21.8587638158144	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGTATTTTATTCT	NA	False	NA	-1	True	AATAAA	-20	NA	69520786	69503358	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_69504899_69505796_69505921_69506450_69506628_69508608_69508693_69510759_69510968_69513723_69513901_69520583
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185352	chrX	+	192	1	Intergenic	novelGene_5695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCTGTTGGTTGAAAAT	NA	False	NA	NA	False	NA	NA	NA	70204134	70204326	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_70204100_70204300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185356	chrX	+	3381	15	FSM	ENSMUSG00000031337.17	ENSMUST00000061970.12	3379	15	0	-2	0	2	multi-exon	FALSE	canonical	3	290	junction_14	28.3207755284104	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGGGCTATGACTGTGT	NA	False	NA	18	True	AATAAA	-26	NA	70258611	70358903	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185376	chrX	+	3372	15	NIC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	-8	3	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	80.3753947525774	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATTTCCAGGGCTATGA	NA	False	NA	12	True	AATAAA	-44	NA	70258679	70358897	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_70258754_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185387	chrX	+	4643	15	FSM	ENSMUSG00000015214.15	ENSMUST00000015358.8	4634	15	-8	-1	-8	1	multi-exon	FALSE	canonical	3	55	junction_13	10.0440356959354	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTTGTCTCTGTGTTTT	NA	False	NA	12	True	ACTAAA	-25	NA	70408357	70462803	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_70408679_70413404_70413511_70426805_70426882_70431828_70431924_70432258_70432367_70435295_70435398_70436121_70436206_70436901_70437052_70437882_70438072_70444146_70444333_70445333_70445541_70448477_70448571_70454338_70454453_70455810_70455988_70460168
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185398	chrX	-	3386	10	FSM	ENSMUSG00000035776.15	ENSMUST00000037391.12	3600	10	208	6	4	-6	multi-exon	FALSE	canonical	3	43	junction_4	6.51683479938452	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTATGTCCTGATGTGAT	NA	False	NA	-5	True	NA	NA	NA	70536247	70463671	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_70466356_70467629_70467696_70472652_70472773_70473916_70473956_70481739_70481806_70484130_70484218_70484679_70484752_70493544_70493614_70494216_70494280_70536127
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185405	chrX	+	1563	5	FSM	ENSMUSG00000015217.12	ENSMUST00000072699.13	1571	5	-4	12	-4	-12	multi-exon	FALSE	canonical	3	598	junction_1	126.240593708997	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACGGCCTAAATTTCTGAC	NA	False	NA	NA	False	AATAAA	-33	NA	70599519	70604270	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_70599615_70601658_70601814_70602038_70602179_70602703_70602879_70603272
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185417	chrX	+	1669	5	FSM	ENSMUSG00000015217.12	ENSMUST00000114582.9	1743	5	62	12	0	-12	multi-exon	FALSE	canonical	3	153	junction_1	303.596360320739	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACGGCCTAAATTTCTGAC	NA	False	NA	NA	False	AATAAA	-33	NA	70599595	70604270	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_70599797_70601658_70601814_70602038_70602179_70602703_70602879_70603272
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185440	chrX	+	235	1	Intergenic	novelGene_5696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATGCACTCCTAAAAAC	NA	False	NA	NA	False	NA	NA	NA	71631924	71632159	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_71631900_71632200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185447	chrX	-	202	1	Intergenic	novelGene_5697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTGTGGAAATATAGAATG	NA	False	NA	NA	False	NA	NA	NA	71944774	71944572	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_71944600_71944800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185463	chrX	+	1774	8	FSM	ENSMUSG00000031349.5	ENSMUST00000033715.5	2168	8	18	376	18	-376	multi-exon	FALSE	canonical	3	334	junction_6	28.7537042866494	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGGTGTGGTCTTTAT	NA	False	NA	20	True	CATAAA	-20	NA	71962180	72001744	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_71962300_71969899_71970017_71973229_71973389_71992770_71992918_71996448_71996578_71998677_71998821_71999942_72000046_72000887
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185481	chrX	-	2611	5	NNC	ENSMUSG00000050424.10	novel	2287	2	NA	NA	-2597	0	at_least_one_novel_splicesite	FALSE	canonical	1	35	junction_1	20.9568008054665	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTTCTGGCGATGTTC	NA	False	NA	0	True	AATAAA	-21	NA	72083306	72077586	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_-_72077934_72078769_72080775_72080892_72080952_72081548_72081672_72083229
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185504	chrX	-	2394	8	NIC	ENSMUSG00000057836.13	novel	1645	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	586	junction_6	364.100344993643	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	-5	True	AATAAA	-18	NA	72140633	72129898	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72135498_72136875_72136911_72137788_72137859_72138566_72138689_72140586
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185506	chrX	-	1603	9	FSM	ENSMUSG00000057836.13	ENSMUST00000074619.6	1645	9	44	-2	8	0	multi-exon	FALSE	canonical	3	586	junction_7	340.598531081683	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	-5	True	AATAAA	-18	NA	72140657	72129898	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135498_72136875_72136911_72137788_72137859_72138566_72138689_72140586
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185521	chrX	-	1151	9	FSM	ENSMUSG00000058328.14	ENSMUST00000078574.12	1650	9	30	469	30	305	multi-exon	TRUE	canonical	3	269	junction_2	77.2438306598009	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCATGCTTTCATTTC	NA	False	NA	NA	False	AATAAA	-16	NA	72161278	72151709	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161207
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185530	chrX	-	1020	8	FSM	ENSMUSG00000058328.14	ENSMUST00000114521.8	1474	8	-17	471	-17	303	multi-exon	FALSE	canonical	3	112	junction_7	121.461844180947	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72161325	72151711	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_72152123_72152218_72152324_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161284
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185532	chrX	-	1119	9	NIC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	-17	303	combination_of_known_junctions	FALSE	canonical	3	112	junction_8	115.823141038395	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72161325	72151711	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161284
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185541	chrX	-	1050	8	NIC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	30	303	combination_of_known_junctions	FALSE	canonical	3	293	junction_4	76.0110088696878	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72161278	72151711	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_-_72152123_72152218_72152324_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161207
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185562	chrX	+	1620	9	FSM	ENSMUSG00000073125.11	ENSMUST00000101486.5	1564	9	-43	-13	-28	3	multi-exon	FALSE	canonical	3	836	junction_5	296.174779479955	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGCATGAGTCATTTAAT	NA	False	NA	NA	False	AATAAA	-21	NA	72235784	72246539	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241077_72241891_72241992_72243351_72243451_72245455_72245552_72245645
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185571	chrX	+	2424	8	NIC	ENSMUSG00000073125.11	novel	1564	9	NA	NA	-20	0	intron_retention	FALSE	canonical	3	856	junction_4	287.08421576042	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	72235792	72246536	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241992_72243351_72243451_72245455_72245552_72245645
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185583	chrX	+	2300	7	NIC	ENSMUSG00000073125.11	novel	1564	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	39	junction_5	541.181936957331	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	72235817	72246536	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241992_72245455_72245552_72245645
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185594	chrX	+	1150	9	NIC	ENSMUSG00000067768.13	novel	1200	9	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	78.4071903590481	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	18	True	AATAAA	-18	NA	72257980	72266059	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_72258064_72258379_72258463_72258833_72258962_72259646_72259716_72261328_72261447_72262291_72262392_72263579_72263679_72265472_72265569_72265685
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185598	chrX	-	164	1	Intergenic	novelGene_5698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGATGGAGAAAAACTAT	5560	False	NA	NA	False	NA	NA	NA	72269192	72269028	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_72269000_72269200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185629	chrX	-	2421	8	NIC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	-20	2	intron_retention	FALSE	canonical	3	686	junction_4	393.293938993445	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	-6	True	AATAAA	-18	NA	72309016	72298143	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185650	chrX	+	6287	5	FSM	ENSMUSG00000031365.14	ENSMUST00000114499.8	6284	5	-1	-2	-1	2	multi-exon	FALSE	canonical	3	19	junction_2	9.63068014212911	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTTCTTGACTCATTTC	NA	False	NA	14	True	NA	NA	NA	72386225	72402688	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_72386358_72388442_72388519_72395414_72395530_72396441_72396544_72396826
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185663	chrX	-	3756	2	Genic_Genomic	ENSMUSG00000096966.3	novel	2298	1	NA	NA	-3024	1252	multi-exon	FALSE	canonical	3	30	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTCACCACTTCCTT	NA	False	NA	0	True	AATAAA	-18	NA	72445366	72438792	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chrX_-_72442387_72445204
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185687	chrX	+	2766	4	FSM	ENSMUSG00000031383.9	ENSMUST00000019701.9	2722	4	-40	-4	-40	4	multi-exon	TRUE	canonical	3	583	junction_1	9.62635271879577	393	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTGTTGCTTCTTGGAC	NA	False	NA	32	True	AATAAA	-26	NA	72682984	72687124	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_72683248_72683798_72684411_72684952_72685409_72685689
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185708	chrX	+	3977	13	FSM	ENSMUSG00000019558.15	ENSMUST00000114465.9	3314	13	-663	0	-28	0	multi-exon	FALSE	canonical	3	360	junction_3	45.3026857187665	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTCCTGTTTCTGCTTC	NA	False	NA	30	True	AATAAA	-20	NA	72716727	72726108	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185716	chrX	+	4354	12	NIC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	16	0	intron_retention	FALSE	canonical	3	365	junction_8	42.9568301460705	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTCCTGTTTCTGCTTC	NA	False	NA	30	True	AATAAA	-20	NA	72716771	72726108	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_72717657_72719243_72719376_72720255_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185719	chrX	-	1262	8	FSM	ENSMUSG00000002015.6	ENSMUST00000002091.6	1219	8	-39	-4	-39	4	multi-exon	FALSE	canonical	3	2403	junction_7	231.225131040053	661	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTCTAACTGAGGCTT	NA	False	NA	-9	True	AATAAA	-21	NA	72759820	72729779	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_72730202_72731442_72731544_72732265_72732387_72733152_72733289_72750602_72750751_72756050_72756152_72758398_72758535_72759723
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185740	chrX	+	248	1	Intergenic	novelGene_5699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGGGAGACAGCTACCAG	NA	False	NA	NA	False	NA	NA	NA	72791916	72792164	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_72791900_72792200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185754	chrX	-	2354	9	NIC	ENSMUSG00000002010.18	novel	2080	10	NA	NA	-6	0	intron_retention	FALSE	canonical	3	1120	junction_6	124.053415914275	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCCTGTTCTTCCCTT	NA	False	NA	-28	True	AATAAA	-19	NA	72830509	72822568	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_-_72822778_72823071_72823133_72823219_72823730_72823818_72823922_72824179_72824637_72824757_72824819_72825282_72825396_72825611_72826323_72830380
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185755	chrX	-	1291	12	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	210	junction_11	355.941284971423	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCCTGTTCTTCCCTT	NA	False	NA	-28	True	AATAAA	-19	NA	72830228	72822568	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72830133
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185758	chrX	-	1352	12	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	1072	junction_10	144.485579365652	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCCTGTTCTTCCCTT	NA	False	NA	-28	True	AATAAA	-19	NA	72830536	72822568	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72830380
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185766	chrX	-	1342	13	FSM	ENSMUSG00000002010.18	ENSMUST00000052761.9	1331	13	-11	0	-11	0	multi-exon	FALSE	canonical	2	205	junction_10	445.162891535222	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCCTGTTCTTCCCTT	NA	False	NA	-28	True	AATAAA	-19	NA	72830514	72822568	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72825903_72825916_72826280_72826323_72830380
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185796	chrX	+	822	6	FSM	ENSMUSG00000002014.13	ENSMUST00000166518.8	800	6	-18	-4	-18	2	multi-exon	FALSE	canonical	3	1181	junction_1	165.944569058466	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGGGCTCCTGTGTCTAT	5414	False	NA	50	True	AATAAA	-32	NA	72830615	72834434	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_72830913_72832440_72832560_72833405_72833481_72833636_72833727_72833964_72834031_72834259
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185825	chrX	-	184	1	Intergenic	novelGene_5700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAGAAAGCAGGAGCTGA	NA	False	NA	NA	False	NA	NA	NA	72877834	72877650	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_72877600_72877800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185834	chrX	-	1025	8	FSM	ENSMUSG00000031388.15	ENSMUST00000114389.10	1031	8	8	-2	8	0	multi-exon	FALSE	canonical	3	794	junction_1	110.126457923125	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGGGTATGCTTTTTTT	NA	False	NA	-1	True	AATAAA	-38	NA	72965522	72960478	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_72960893_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185843	chrX	-	922	8	FSM	ENSMUSG00000031388.15	ENSMUST00000033763.15	962	8	38	2	0	0	multi-exon	FALSE	canonical	3	198	junction_1	315.02562254068	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTGGGGTATGCTTTTT	NA	False	NA	-3	True	AATAAA	-36	NA	72965512	72960480	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_72960802_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185859	chrX	-	1420	11	FSM	ENSMUSG00000031387.15	ENSMUST00000116578.8	1418	11	0	-2	0	2	multi-exon	FALSE	canonical	3	1767	junction_7	141.190120050944	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGCGCGCCTCTGTG	NA	False	NA	0	True	AATAAA	-20	NA	72974456	72965724	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973792_72973869_72974013_72974124_72974319
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185883	chrX	-	1328	11	FSM	ENSMUSG00000031387.15	ENSMUST00000114379.8	1318	11	-10	0	-10	0	multi-exon	FALSE	canonical	3	383	junction_8	509.144390129166	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGCGCGCCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	72974408	72965726	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973834_72973869_72974013_72974124_72974319
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185894	chrX	-	1299	11	NNC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_10	590.512192930849	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCTTGTGTGCGCGCCTC	NA	False	NA	-4	True	AATAAA	-16	NA	72974446	72965728	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973792_72973869_72974013_72974124_72974426
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185911	chrX	-	8760	26	FSM	ENSMUSG00000031386.15	ENSMUST00000033761.13	8138	26	-624	2	-624	1	multi-exon	FALSE	canonical	3	303	junction_17	65.7475900699029	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGTATTTACCCGTGT	NA	False	NA	-12	True	ATTAAA	-21	NA	73010587	72986399	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185912	chrX	-	8762	26	NIC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	-623	1	combination_of_known_junctions	FALSE	canonical	3	79	junction_7	87.5837793201458	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGTATTTACCCGTGT	NA	False	NA	-12	True	ATTAAA	-21	NA	73010586	72986399	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991124_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185920	chrX	-	8891	26	NIC	ENSMUSG00000031386.15	novel	8262	26	NA	NA	-624	0	combination_of_known_junctions	FALSE	canonical	3	139	junction_8	79.9086878881139	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGGTATTTACCCGTG	NA	False	NA	-13	True	ATTAAA	-20	NA	73010587	72986400	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72992025_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185926	chrX	+	178	1	Intergenic	novelGene_5701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGTGAGCCACCATGTG	NA	False	NA	NA	False	NA	NA	NA	73040197	73040375	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_73040200_73040400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185936	chrX	-	3843	14	FSM	ENSMUSG00000031392.19	ENSMUST00000114354.10	3835	14	-8	0	-8	0	multi-exon	FALSE	canonical	3	198	junction_10	56.8590076026845	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTTTTAATTTTCTTT	NA	False	NA	0	True	NA	NA	NA	73067532	73057519	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185960	chrX	-	1753	3	FSM	ENSMUSG00000031393.17	ENSMUST00000033770.13	1739	3	-10	-4	-10	4	multi-exon	FALSE	canonical	3	119	junction_2	51.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGAGTTTCGTGGCTTCG	NA	False	NA	NA	False	AATAAA	-26	NA	73129306	73078889	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_73080101_73080587_73080939_73129115
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185962	chrX	-	1816	4	FSM	ENSMUSG00000031393.17	ENSMUST00000100750.10	10538	4	30	8692	-27	4	multi-exon	FALSE	canonical	3	104	junction_3	52.083266666624	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGAGTTTCGTGGCTTCG	NA	False	NA	NA	False	AATAAA	-26	NA	73129245	73078889	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_73080101_73080587_73080939_73123514_73123639_73129115
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185978	chrX	+	2470	13	FSM	ENSMUSG00000031397.12	ENSMUST00000010127.12	2473	13	1	2	1	-2	multi-exon	FALSE	canonical	2	11	junction_9	3.8151743807532	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTTTATGCAGTTTGTG	6477	False	NA	4	True	AATAAA	-16	NA	73220865	73252104	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_73221030_73225389_73225505_73234827_73234926_73237124_73237317_73237399_73237528_73240589_73240784_73241245_73241411_73244203_73244361_73246136_73246268_73248479_73248564_73249479_73249577_73249950_73250071_73251279
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185984	chrX	-	8249	47	FSM	ENSMUSG00000031328.17	ENSMUST00000033699.13	8312	47	143	-80	-14	0	multi-exon	FALSE	canonical	3	112	junction_19	126.416146359915	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTTTCATGGAAGGAG	NA	False	NA	-3	True	AATAAA	-25	NA	73290018	73267066	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276572_73276597_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000185986	chrX	-	8358	46	FSM	ENSMUSG00000031328.17	ENSMUST00000101454.9	8345	46	-11	-2	10	0	multi-exon	FALSE	canonical	3	440	junction_27	88.6461017644018	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTTTCATGGAAGGAG	NA	False	NA	-3	True	AATAAA	-25	NA	73290151	73267066	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186013	chrX	+	864	7	FSM	ENSMUSG00000008682.14	ENSMUST00000008826.14	799	7	-65	0	-65	0	multi-exon	FALSE	canonical	3	2920	junction_1	2439.95592514838	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	False	NA	12	True	AATAAA	-22	NA	73314352	73316741	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_73314481_73314584_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186022	chrX	+	858	6	FSM	ENSMUSG00000008682.14	ENSMUST00000074085.12	855	6	-3	0	0	0	multi-exon	FALSE	canonical	3	7516	junction_1	832.521615335001	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	False	NA	12	True	AATAAA	-22	NA	73314462	73316741	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186041	chrX	+	1753	9	FSM	ENSMUSG00000009995.18	ENSMUST00000124200.8	1742	9	-10	-1	-10	1	multi-exon	FALSE	canonical	3	81	junction_7	66.075241202738	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTCTTCTGTGTAG	NA	False	NA	8	True	AATAAA	-21	NA	73326345	73333755	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332120_73332710_73332789_73332904
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186054	chrX	+	2565	7	NIC	ENSMUSG00000009995.18	novel	2368	9	NA	NA	0	1	intron_retention	FALSE	canonical	3	226	junction_5	12.5266382827424	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTCTTCTGTGTAG	NA	False	NA	8	True	AATAAA	-21	NA	73326355	73333755	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73332789_73332904
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186088	chrX	+	2651	11	FSM	ENSMUSG00000015291.11	ENSMUST00000015435.11	2666	11	15	0	1	0	multi-exon	FALSE	canonical	3	553	junction_5	84.5884152824723	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTCTTTAGGTTCTC	5963	False	NA	15	True	AATAAA	-16	NA	73348618	73355468	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351477_73351735_73351868_73352681_73352782_73353568_73353741_73353995_73354141_73354243_73354299_73354392
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186099	chrX	+	2685	10	NIC	ENSMUSG00000015291.11	novel	2666	11	NA	NA	-18	0	intron_retention	FALSE	canonical	3	728	junction_6	47.3648825477846	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTCTTTAGGTTCTC	6188	False	NA	15	True	AATAAA	-16	NA	73348843	73355468	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351868_73352681_73352782_73353568_73353741_73353995_73354141_73354243_73354299_73354392
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186103	chrX	+	3465	9	FSM	ENSMUSG00000015291.11	ENSMUST00000146013.8	3696	9	233	-2	-11	0	multi-exon	FALSE	canonical	3	736	junction_5	44.1572120383522	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTCTTTAGGTTCTC	6195	False	NA	15	True	AATAAA	-16	NA	73348850	73355468	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351868_73352681_73353741_73353995_73354141_73354243_73354299_73354392
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186107	chrX	+	3553	8	ISM	ENSMUSG00000015291.11	ENSMUST00000146013.8	3696	9	239	-2	-5	0	intron_retention	FALSE	canonical	3	736	junction_5	42.2972957113075	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTCTTTAGGTTCTC	6201	False	NA	15	True	AATAAA	-16	NA	73348856	73355468	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351868_73352681_73353741_73353995_73354141_73354243
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186127	chrX	+	1402	13	FSM	ENSMUSG00000001962.9	ENSMUST00000114160.2	1383	13	-13	-6	-13	6	multi-exon	FALSE	canonical	3	663	junction_3	69.864700592566	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTGCGCTTTATTTTAT	186	False	NA	NA	False	AATAAA	-39	NA	73356625	73363761	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_73356932_73358282_73358368_73358469_73358570_73359032_73359179_73361035_73361113_73361242_73361310_73361747_73361810_73361973_73362051_73362420_73362476_73362655_73362705_73362796_73362868_73362997_73363109_73363565
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186135	chrX	-	179	1	Intergenic	novelGene_5702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CATTTCCCAAAAAAAAGAAA	8263	False	NA	NA	False	NA	NA	NA	73393454	73393275	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_73393300_73393500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186140	chrX	-	760	3	FSM	ENSMUSG00000015289.5	ENSMUST00000015433.4	761	3	1	0	1	0	multi-exon	FALSE	canonical	3	1433	junction_2	31	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGCCTCTAAATTTTC	4494	False	NA	-18	True	AATAAA	-30	NA	73397223	73395766	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_73396105_73396479_73396609_73396930
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186150	chrX	-	767	3	FSM	ENSMUSG00000015289.5	ENSMUST00000114152.2	746	3	-30	9	-11	-9	multi-exon	FALSE	canonical	3	109	junction_1	662	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCTTATTTTCAGCCT	4506	False	NA	-28	True	AATAAA	-20	NA	73397211	73395776	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_73396105_73396450_73396609_73396930
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186168	chrX	-	1822	9	FSM	ENSMUSG00000031399.16	ENSMUST00000114143.10	1899	9	54	23	-36	19	multi-exon	FALSE	canonical	3	109	junction_1	16.2322017915007	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGTATTCAGATGTCC	NA	False	NA	-29	True	AATAAA	-20	NA	73436824	73428347	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_73429042_73430027_73430155_73430237_73430323_73430639_73430691_73431043_73431103_73431233_73431358_73434079_73434104_73434596_73434711_73436280
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186179	chrX	-	2415	13	FSM	ENSMUSG00000031400.11	ENSMUST00000004327.11	2652	13	237	0	-77	0	multi-exon	FALSE	canonical	3	267	junction_8	19.8990507869653	278	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCCTTGTTCTTTTC	NA	False	NA	-6	True	ATTAAA	-18	NA	73472563	73453088	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924_73456084_73457469_73457688_73458513_73458623_73458721_73458760_73471657_73471786_73472428
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186207	chrX	+	2786	15	FSM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	25	-7	25	7	multi-exon	FALSE	canonical	3	1536	junction_9	499.509294922813	1090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTTCCTTTGGCTAC	NA	False	NA	41	True	ATTAAA	-28	NA	74139484	74153390	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186224	chrX	+	2606	15	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_1	947.11987690286	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATTTGCTTTTCCTT	NA	False	NA	34	True	ATTAAA	-21	NA	74139674	74153383	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_74139734_74140238_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186226	chrX	+	2670	16	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_1	815.250756243474	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATTTGCTTTTCCTT	NA	False	NA	34	True	ATTAAA	-21	NA	74139675	74153383	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_74139734_74140238_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186238	chrX	+	3152	15	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-6	0	intron_retention	FALSE	canonical	3	151	junction_1	697.349135173	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATTTGCTTTTCCTT	NA	False	NA	34	True	ATTAAA	-21	NA	74139698	74153383	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186258	chrX	+	1702	7	NNC	ENSMUSG00000031403.15	novel	610	3	NA	NA	-1812	7	at_least_one_novel_splicesite	FALSE	canonical	3	454	junction_1	848.656143558744	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTTCCTTTGGCTAC	NA	False	NA	41	True	ATTAAA	-28	NA	74147742	74153390	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_+_74147807_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186261	chrX	+	1841	6	ISM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	8283	-7	-1812	7	3prime_fragment	FALSE	canonical	3	2464	junction_5	150.861525910353	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTTCCTTTGGCTAC	NA	False	NA	41	True	ATTAAA	-28	NA	74147742	74153390	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chrX_+_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186273	chrX	+	1751	7	NNC	ENSMUSG00000031403.15	novel	610	3	NA	NA	-1793	0	at_least_one_novel_splicesite	FALSE	canonical	3	102	junction_1	978.331643950841	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATTTGCTTTTCCTT	NA	False	NA	34	True	ATTAAA	-21	NA	74147761	74153383	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_+_74147882_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186296	chrX	+	217	1	Intergenic	novelGene_5703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGGGGTAAAGGAATGAGA	4075	False	NA	NA	False	NA	NA	NA	74317322	74317539	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_74317300_74317500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186310	chrX	-	678	4	FSM	ENSMUSG00000090110.9	ENSMUST00000149863.3	507	4	9	-180	9	0	multi-exon	FALSE	canonical	3	61	junction_2	9.20144916122817	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTTTGTTACTAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	74460181	74448451	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_74448825_74453151_74453220_74459620_74459820_74460143
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186331	chrX	-	3143	16	FSM	ENSMUSG00000016382.16	ENSMUST00000114059.10	3149	16	0	6	0	3	multi-exon	FALSE	canonical	3	263	junction_13	28.3953047762008	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTACTCTCTTTTGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	74918788	74829265	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_74830506_74834567_74834693_74834890_74835015_74837194_74837329_74837782_74837898_74838912_74838992_74839939_74840136_74843000_74843097_74844107_74844251_74845181_74845348_74846130_74846213_74848745_74848879_74849356_74849487_74859689_74859854_74870478_74870560_74918653
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186336	chrX	+	223	1	Intergenic	novelGene_5704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	542	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATGAAGATGATTCTCAT	NA	False	NA	NA	False	NA	NA	NA	74928041	74928264	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_74928000_74928300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186344	chrX	+	202	1	Intergenic	novelGene_5705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGCAACAATTAATGAAAG	5804	False	NA	NA	False	NA	NA	NA	75110245	75110447	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_75110200_75110400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186357	chrX	+	5450	16	FSM	ENSMUSG00000025246.14	ENSMUST00000088217.12	5234	16	-207	-9	-207	9	multi-exon	TRUE	canonical	3	377	junction_1	40.4669412401448	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACTGTGTTTTTCTTTTT	NA	False	NA	21	True	AATAAA	-29	NA	76554411	76706598	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186365	chrX	+	5297	17	NIC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	5	2	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	145.192921228964	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATAGTGACTGTGTTTT	NA	False	NA	14	True	AATAAA	-22	NA	76554623	76706591	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_76554876_76628399_76628466_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186374	chrX	+	190	1	Intergenic	novelGene_5706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACCTGAAAGGGTATAGA	NA	False	NA	NA	False	NA	NA	NA	76562257	76562447	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_76562300_76562400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186396	chrX	+	495	1	FSM	ENSMUSG00000081049.2	ENSMUST00000118723.2	402	1	-11	-82	-11	82	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGAAAGGCTGGGGAAA	NA	False	NA	NA	False	NA	NA	NA	78238641	78239136	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_78238600_78239100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186405	chrX	-	1727	3	FSM	ENSMUSG00000046942.18	ENSMUST00000114016.10	1725	3	-2	0	-2	0	multi-exon	FALSE	canonical	3	241	junction_2	42	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCTCTCTTTTATTAC	NA	False	NA	0	True	AATAAA	-22	NA	78679190	78666836	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_78668390_78671446_78671527_78679096
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186406	chrX	-	1950	4	FSM	ENSMUSG00000046942.18	ENSMUST00000052283.7	1854	4	-96	0	-96	0	multi-exon	FALSE	canonical	3	76	junction_2	116.448367194316	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCTCTCTTTTATTAC	NA	False	NA	0	True	AATAAA	-22	NA	78715137	78666836	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_78668390_78671446_78671527_78685326_78685395_78714888
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186421	chrX	+	207	1	Intergenic	novelGene_5707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATAAGCAACAGAAACCAAG	NA	False	NA	NA	False	NA	NA	NA	78766393	78766600	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_78766400_78766600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186433	chrX	+	1880	1	FSM	ENSMUSG00000081205.5	ENSMUST00000117582.2	1068	1	-55	-757	-55	757	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAGTAATAATGGTCAA	NA	False	NA	NA	False	AAAAAG	-28	NA	79500292	79502172	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_79500300_79502200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186443	chrX	+	4177	3	FSM	ENSMUSG00000025666.17	ENSMUST00000026760.3	4007	3	-64	-106	-46	106	multi-exon	TRUE	canonical	3	148	junction_2	10.5	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGCAAAATGTGTATAGT	NA	False	NA	124	True	ATTAAA	-19	NA	80114257	80141584	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_80114767_80127896_80128038_80138057
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186461	chrX	+	4570	17	NIC	ENSMUSG00000045103.20	novel	4438	18	NA	NA	-35	2	combination_of_known_junctions	FALSE	canonical	3	247	junction_13	44.1996535619907	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATTGGTTGGACTGTAGT	NA	False	NA	21	True	AATAAA	-27	NA	84091865	84248656	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_84092066_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186491	chrX	-	3636	20	FSM	ENSMUSG00000025059.17	ENSMUST00000156390.8	4245	20	-49	658	-33	-658	multi-exon	TRUE	canonical	3	125	junction_19	13.2977827073068	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATTTCTCATTTCCAG	NA	False	NA	-5	True	AATAAA	-19	NA	84820292	84746200	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186515	chrX	-	2181	3	NNC	ENSMUSG00000035427.19	novel	2401	3	NA	NA	-34	-49161	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	13	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTCTTTGCTCAATAG	NA	False	NA	NA	False	AATAAA	-21	NA	85348733	85343022	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_-_85344996_85347819_85347902_85348607
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186528	chrX	-	195	1	Intergenic	novelGene_5708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAAAGTACAGTGATTTC	NA	False	NA	NA	False	NA	NA	NA	86194543	86194348	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_86194300_86194500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186531	chrX	+	177	1	Intergenic	novelGene_5709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGTAACATATGGATTAAT	NA	False	NA	NA	False	NA	NA	NA	86204583	86204760	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_86204600_86204800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186542	chrX	+	204	1	Intergenic	novelGene_5710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGAGCCGTGAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	90385407	90385611	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_90385400_90385600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186555	chrX	+	184	1	Intergenic	novelGene_5711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTAAAGTTCTTGCTAA	NA	False	NA	NA	False	NA	NA	NA	91894820	91895004	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_91894800_91895000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186563	chrX	-	5381	37	FSM	ENSMUSG00000006678.7	ENSMUST00000006856.3	5346	37	-33	-2	-33	2	multi-exon	FALSE	canonical	3	370	junction_20	43.7489682418023	402	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTGTTTTGTTTTGTT	4244	False	NA	0	True	AATAAA	-21	NA	92675794	92348370	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186587	chrX	+	181	1	Intergenic	novelGene_5712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGAGAGAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	92679325	92679506	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_92679300_92679500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186613	chrX	+	178	1	Intergenic	novelGene_5713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAGAAAATGATC	NA	False	NA	NA	False	NA	NA	NA	92821957	92822135	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_92822000_92822100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186621	chrX	+	209	1	Intergenic	novelGene_5714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGCAAATGGATGGAACT	NA	False	NA	NA	False	NA	NA	NA	93088639	93088848	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_93088600_93088800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186630	chrX	-	6730	9	FSM	ENSMUSG00000079509.11	ENSMUST00000088102.12	7002	9	272	0	-3	0	multi-exon	FALSE	canonical	3	51	junction_8	23.8298001460356	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGTGGAGTGTTGGCTA	NA	False	NA	-1	True	AATAAA	-22	NA	93166741	93118236	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93157801_93157870_93166673
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186643	chrX	+	207	3	Intergenic	novelGene_5715	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGATGTTATTCTTGCTC	NA	False	NA	NA	False	NA	NA	NA	93134199	93305773	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_93134231_93224547_93224567_93305616
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186650	chrX	+	201	1	Intergenic	novelGene_5716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGAGGAAGAGGATGAGG	NA	False	NA	NA	False	NA	NA	NA	93173097	93173298	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_93173100_93173300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186656	chrX	-	237	1	Intergenic	novelGene_5717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCACATGCATGCATTCC	NA	False	NA	NA	False	NA	NA	NA	93207302	93207065	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_93207100_93207300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186670	chrX	-	159	1	Intergenic	novelGene_5718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAAGAGGGCTAT	NA	False	NA	NA	False	NA	NA	NA	93215279	93215120	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_93215100_93215300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186673	chrX	+	199	1	Intergenic	novelGene_5719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTGGGGGCTGCTCTTA	NA	False	NA	NA	False	NA	NA	NA	93227720	93227919	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_93227700_93227900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186681	chrX	-	3642	12	FSM	ENSMUSG00000035150.16	ENSMUST00000050328.15	3647	12	9	-4	9	4	multi-exon	TRUE	canonical	3	1008	junction_2	64.9970120101527	988	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCCCATGTGTTTTATA	NA	False	NA	2	True	AATAAA	-25	NA	93256306	93232308	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256170
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186715	chrX	+	935	9	FSM	ENSMUSG00000079508.9	ENSMUST00000113898.8	784	9	-19	-132	-19	0	multi-exon	FALSE	canonical	3	325	junction_1	51.8975854447969	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCCTGCTTTCTTTACT	NA	False	NA	NA	False	ATTAAA	-18	NA	93410703	93460699	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_93410769_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065_93456132_93460447
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186735	chrX	-	2919	12	FSM	ENSMUSG00000025151.17	ENSMUST00000153386.8	2884	12	-33	-2	-20	0	multi-exon	TRUE	canonical	3	1240	junction_9	165.668493041908	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGTGCTTCTCATCTT	NA	False	NA	-2	True	AATAAA	-21	NA	93585629	93579079	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93584856_93584931_93585497
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186744	chrX	-	2627	12	NIC	ENSMUSG00000025151.17	novel	2821	13	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	123	junction_11	424.670839962022	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGTGCTTCTCATCTT	NA	False	NA	-2	True	AATAAA	-21	NA	93585629	93579079	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93585497
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186761	chrX	-	4178	1	FSM	ENSMUSG00000071722.5	ENSMUST00000096367.5	4173	1	0	-5	0	5	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTAGTGACTTTTGTGTTT	NA	False	NA	NA	False	AATAAA	-30	NA	94070288	94066110	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_94066100_94070300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186766	chrX	+	196	1	Intergenic	novelGene_5720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGTATACCGAGTAATGG	NA	False	NA	NA	False	NA	NA	NA	94427759	94427955	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_94427800_94428000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186786	chrX	-	187	1	Intergenic	novelGene_5721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAGACATCTGTCAGAAGG	NA	False	NA	NA	False	NA	NA	NA	94794577	94794390	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_94794400_94794600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186801	chrX	-	3398	12	NIC	ENSMUSG00000057421.13	novel	2530	13	NA	NA	10	15	intron_retention	FALSE	canonical	3	815	junction_5	68.2767823514294	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGAGATGAGGGATGTG	NA	False	NA	-21	True	AATAAA	-19	NA	95000509	94978925	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186808	chrX	-	2587	14	FSM	ENSMUSG00000057421.13	ENSMUST00000113864.3	2581	14	9	-15	9	15	multi-exon	FALSE	canonical	3	26	junction_5	331.353544718678	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGAGATGAGGGATGTG	NA	False	NA	-21	True	AATAAA	-19	NA	95000510	94978925	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991003_94991055_94991375_94991462_94993942_94994053_94994915_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186813	chrX	-	2531	13	NNC	ENSMUSG00000057421.13	novel	2530	13	NA	NA	9	14	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	254.53072287818	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGAGATGAGGGATGT	NA	False	NA	-22	True	AATAAA	-18	NA	95000510	94978926	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_-_94979256_94980981_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994053_94994915_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186850	chrX	+	5339	12	NIC	ENSMUSG00000031207.17	novel	3842	13	NA	NA	0	1	intron_retention	FALSE	canonical	3	982	junction_9	98.4644081352317	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGACTCAGTCTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	95139647	95212159	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_95139850_95185470_95185555_95194225_95194322_95196129_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186860	chrX	+	651	1	FSM	ENSMUSG00000082035.2	ENSMUST00000118924.2	621	1	0	-30	0	30	mono-exon	FALSE	NA	NA	NA	NA	NA	305	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAGGAAAAATATCATTC	NA	False	NA	NA	False	AATAAA	-44	NA	95528464	95529115	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_95528500_95529100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186876	chrX	-	6127	7	FSM	ENSMUSG00000034457.11	ENSMUST00000126283.8	2153	7	-20	-3954	-20	3	multi-exon	FALSE	canonical	3	97	junction_5	9.18331820930394	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGTTTATTCCTCGGC	NA	False	NA	-20	True	AATAAA	-17	NA	96420842	96377442	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96420706
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186885	chrX	+	192	1	Intergenic	novelGene_5722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGTCTTCAAAGTATCCA	NA	False	NA	NA	False	NA	NA	NA	97190464	97190656	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_97190500_97190700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186890	chrX	+	183	1	Intergenic	novelGene_5723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTAACGAGTTCAGGTT	NA	False	NA	NA	False	NA	NA	NA	97813223	97813406	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_97813200_97813400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186901	chrX	+	4912	14	FSM	ENSMUSG00000031216.14	ENSMUST00000036606.14	4963	14	51	0	51	0	multi-exon	TRUE	canonical	3	27	junction_1	6.60016137511158	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTCTGGAGAGTTTG	NA	False	NA	3	True	AATAAA	-18	NA	98086237	98118334	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_98086401_98104333_98104406_98106970_98107053_98107999_98108064_98109163_98110570_98111194_98111369_98112179_98112340_98112793_98112993_98113352_98113564_98113827_98113943_98114879_98115105_98116039_98116258_98116359_98116537_98116688
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186917	chrX	+	233	1	Intergenic	novelGene_5724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCATTACACTTTCTTATA	NA	False	NA	NA	False	NA	NA	NA	98364385	98364618	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_98364400_98364600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186924	chrX	-	2694	2	FSM	ENSMUSG00000034403.17	ENSMUST00000167246.2	2666	2	6	-34	6	0	multi-exon	FALSE	canonical	3	379	junction_1	0	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGCGCTTACACATCTT	NA	False	NA	NA	False	NA	NA	NA	98514335	98509339	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_98511921_98514222
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186941	chrX	-	1748	3	FSM	ENSMUSG00000034403.17	ENSMUST00000113790.8	2108	3	-12	372	-7	4	multi-exon	FALSE	canonical	3	92	junction_1	143.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGCATCATTTGGATTT	NA	False	NA	0	True	ATTAAA	-26	NA	98514305	98509715	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_98511189_98511728_98511921_98514222
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186946	chrX	-	2588	2	FSM	ENSMUSG00000034403.17	ENSMUST00000036354.7	2563	2	-21	-4	-21	4	multi-exon	FALSE	canonical	3	84	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGCATCATTTGGATTT	NA	False	NA	0	True	ATTAAA	-26	NA	98514319	98509715	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_98512207_98514222
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186953	chrX	+	4387	7	ISM	ENSMUSG00000059327.10	ENSMUST00000113779.8	4955	8	334385	0	-75152	0	3prime_fragment	FALSE	canonical	2	9	junction_6	6.54259547546351	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGACATTATCTTGAGC	NA	False	NA	5	True	AATAAA	-16	NA	99353596	99444366	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chrX_+_99353706_99425060_99425085_99433307_99433488_99434946_99434982_99435938_99435991_99438624_99438756_99440510
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186954	chrX	+	4381	7	NIC	ENSMUSG00000059327.10	novel	5105	9	NA	NA	-75152	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_6	5.99305153212173	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGACATTATCTTGAGC	NA	False	NA	5	True	AATAAA	-16	NA	99353596	99444366	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_99353706_99425060_99425085_99433307_99433488_99434946_99434982_99435938_99435991_99438624_99438750_99440510
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186965	chrX	+	2369	1	FSM	ENSMUSG00000051582.3	ENSMUST00000060241.3	873	1	-126	-1370	-126	1370	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTGCATTTCTTGTGCA	NA	False	NA	9	True	AATAAA	-19	NA	99472492	99474861	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_99472500_99474900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000186973	chrX	+	1351	6	FSM	ENSMUSG00000031221.8	ENSMUST00000033570.6	1518	6	46	121	-18	-121	multi-exon	FALSE	canonical	3	351	junction_5	20.4743742273116	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGTATCCGCTGGTTTT	NA	False	NA	29	True	AATAAA	-32	NA	99537942	99559610	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_99538163_99538510_99538805_99546600_99546797_99548795_99548876_99549545_99549659_99559162
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187016	chrX	+	205	1	Intergenic	novelGene_5725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAGGAAGAGAAC	NA	False	NA	NA	False	NA	NA	NA	99738017	99738222	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_99738000_99738200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187022	chrX	+	3975	14	FSM	ENSMUSG00000000881.13	ENSMUST00000113735.3	3692	14	-281	-2	-281	0	multi-exon	FALSE	canonical	3	21	junction_2	29.3332212656995	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGCTCAGAGGTCTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	99818065	99862016	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_99818551_99819412_99819570_99819984_99820088_99840291_99840407_99850117_99850295_99850785_99850862_99851658_99851759_99855107_99855150_99856331_99856383_99856942_99857045_99857809_99857983_99858398_99858509_99858813_99858906_99859824
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187028	chrX	+	3382	12	FSM	ENSMUSG00000000881.13	ENSMUST00000151020.8	3316	12	-64	-2	-64	0	multi-exon	FALSE	canonical	3	72	junction_1	11.5078126534158	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGCTCAGAGGTCTTCT	635	False	NA	NA	False	AATAAA	-17	NA	99820826	99862016	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_99820979_99840291_99840407_99850117_99850295_99850785_99850862_99851658_99851759_99855107_99855150_99856331_99856383_99856942_99857045_99857809_99857983_99858398_99858509_99858813_99858906_99859824
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187039	chrX	-	3272	30	FSM	ENSMUSG00000009670.12	ENSMUST00000009814.10	3250	30	-21	-1	7	1	multi-exon	TRUE	canonical	3	57	junction_17	8.2193472636908	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCATTGATCAGCTGATTT	NA	False	NA	-4	True	AATAAA	-17	NA	100103266	99882252	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_99882667_99883306_99883472_99892654_99892776_99893874_99893984_99895431_99895582_99920141_99920215_99923582_99923700_99925849_99925921_99926528_99926616_99927967_99928009_99947363_99947421_99949724_99949811_99960131_99960257_99976993_99977097_99990261_99990400_99995170_99995257_99998305_99998458_100015699_100015779_100018785_100018868_100021229_100021326_100029298_100029354_100051308_100051395_100059149_100059231_100076103_100076224_100076306_100076388_100082652_100082733_100087046_100087132_100094064_100094187_100102961_100103024_100103118
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187047	chrX	+	184	1	Intergenic	novelGene_5726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTAGCATGTTTTCATGT	NA	False	NA	NA	False	NA	NA	NA	99919013	99919197	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_99919000_99919200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187052	chrX	+	182	1	Intergenic	novelGene_5727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATTTTGAGACTCTTG	NA	False	NA	NA	False	NA	NA	NA	100080401	100080583	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_100080400_100080600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187053	chrX	+	182	1	Intergenic	novelGene_5728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGTTTTGTTTT	NA	False	NA	NA	False	AAAAAG	-8	NA	100111400	100111582	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_100111400_100111600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187063	chrX	-	2363	12	FSM	ENSMUSG00000031297.15	ENSMUST00000073927.5	2232	12	-49	-82	-16	70	multi-exon	FALSE	canonical	3	1250	junction_11	82.5987012884915	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAAGTGTCTTGTGTCTTT	NA	False	NA	NA	False	TATAAA	-29	NA	100129027	100122745	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187080	chrX	-	2391	13	NNC	ENSMUSG00000031297.15	novel	2371	13	NA	NA	-2	6	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_12	505.338500413337	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128980	100122809	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128426_100128566_100128877
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187081	chrX	-	2408	13	FSM	ENSMUSG00000031297.15	ENSMUST00000101362.8	2371	13	-20	-17	0	6	multi-exon	FALSE	canonical	3	84	junction_12	497.596780089618	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128978	100122809	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128426_100128585_100128877
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187088	chrX	-	2025	12	NNC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	3	168	junction_10	371.664893941343	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128978	100122809	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127701_100127881_100128877
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187099	chrX	-	1936	12	NNC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	148	junction_10	377.275903601087	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAAAACCTGTCCTGTTC	NA	False	NA	NA	False	ATTAAA	-21	NA	100128978	100122817	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127782_100127881_100128877
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187100	chrX	-	2682	11	FSM	ENSMUSG00000031297.15	ENSMUST00000138162.2	2717	11	33	2	0	-2	multi-exon	FALSE	canonical	3	1250	junction_10	85.0282306060758	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAAAACCTGTCCTGTTC	NA	False	NA	NA	False	ATTAAA	-21	NA	100128978	100122817	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_100123199_100123305_100123415_100123706_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187105	chrX	-	2173	12	NNC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	167	-2	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_11	409.125251083797	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAAAACCTGTCCTGTTC	NA	False	NA	NA	False	ATTAAA	-21	NA	100128791	100122817	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128759
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187110	chrX	-	2071	13	NNC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	150	junction_11	363.313789611986	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAAAACCTGTCCTGTTC	NA	False	NA	NA	False	ATTAAA	-21	NA	100128978	100122817	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127531_100127701_100127881_100128877
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187124	chrX	-	2349	11	NIC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	0	-2	intron_retention	FALSE	canonical	3	1250	junction_10	83.9895231561651	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAAAACCTGTCCTGTTC	NA	False	NA	NA	False	ATTAAA	-21	NA	100128978	100122817	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_-_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187137	chrX	+	203	1	Intergenic	novelGene_5729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	729	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGATAAGAAGAGGGGACC	NA	False	NA	NA	False	NA	NA	NA	100176774	100176977	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_100176800_100177000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187194	chrX	+	2452	12	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-73	0	combination_of_known_junctions	FALSE	canonical	3	397	junction_1	981.218107867263	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTGCTGTTTTTTTT	NA	False	NA	20	True	ATTAAA	-21	NA	100473267	100492197	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_100473369_100474101_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187209	chrX	+	2462	12	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	146	junction_9	1051.63693731909	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTGCTGTTTTTTTT	NA	False	NA	20	True	ATTAAA	-21	NA	100473287	100492197	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488424_100488900_100488941_100489724_100489835_100491199
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187237	chrX	+	2990	11	ISM	ENSMUSG00000031311.18	ENSMUST00000033673.7	2562	12	302	0	122	0	3prime_fragment	FALSE	canonical	3	3075	junction_3	311.365958319146	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTGCTGTTTTTTTT	NA	False	NA	20	True	ATTAAA	-21	NA	100473462	100492197	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chrX_+_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187246	chrX	-	180	1	Intergenic	novelGene_5730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTTGTTTACAGAGGAT	NA	False	NA	NA	False	NA	NA	NA	100490587	100490407	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_100490400_100490600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187252	chrX	+	206	1	Intergenic	novelGene_5731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTGAGACAGTG	5569	False	NA	NA	False	AAGAAA	-9	NA	100530444	100530650	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_100530400_100530600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187277	chrX	+	7148	39	NNC	ENSMUSG00000031314.19	novel	7210	38	NA	NA	-5108	-5	intron_retention	FALSE	canonical	3	80	junction_5	58.3892338670319	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCGAGAGTGATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	100571231	100644635	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_+_100571293_100576457_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584428_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187301	chrX	+	200	1	Intergenic	novelGene_5732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATGATTCTCTAAGCTC	848	False	NA	NA	False	NA	NA	NA	100626963	100627163	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_100627000_100627200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187303	chrX	+	125	1	ISM	ENSMUSG00000031314.19	ENSMUST00000118878.8	7210	38	68171	5	10358	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCGAGAGTGATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	100644510	100644635	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chrX_+_100644500_100644600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187326	chrX	+	5326	22	NIC	ENSMUSG00000034160.14	novel	5384	22	NA	NA	-2	0	intron_retention	FALSE	canonical	3	162	junction_1	123.579218031398	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTTGGTGTAGTTTGT	NA	False	NA	15	True	AATAAA	-20	NA	100683697	100727957	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_100683929_100686611_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187330	chrX	+	8770	21	NIC	ENSMUSG00000034160.14	novel	5384	22	NA	NA	-1	0	intron_retention	FALSE	canonical	3	215	junction_1	109.796356952314	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTTGGTGTAGTTTGT	NA	False	NA	15	True	AATAAA	-20	NA	100683698	100727957	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_100683929_100686581_100686763_100687552_100687797_100695745_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187333	chrX	+	5355	22	FSM	ENSMUSG00000034160.14	ENSMUST00000044475.5	5384	22	29	0	-1	0	multi-exon	FALSE	canonical	3	202	junction_4	118.587682955494	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTTGGTGTAGTTTGT	NA	False	NA	15	True	AATAAA	-20	NA	100683698	100727957	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_100683929_100686581_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187347	chrX	+	2152	14	ISM	ENSMUSG00000034160.14	ENSMUST00000119299.8	3840	23	20861	6759	5576	-6759	internal_fragment	FALSE	canonical	3	434	junction_1	51.2136723608685	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCGTACCATTATTGTAAC	NA	False	NA	NA	False	NA	NA	NA	100704526	100719787	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chrX_+_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187362	chrX	-	185	1	Intergenic	novelGene_5733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATTGTGGCAGGTCATA	NA	False	NA	NA	False	NA	NA	NA	100773075	100772890	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_100772900_100773100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187373	chrX	-	2608	5	NIC	ENSMUSG00000045010.15	novel	1991	6	NA	NA	-26	1	intron_retention	FALSE	canonical	3	142	junction_4	69.9052930757035	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTACTTTTGCAACTGTT	NA	False	NA	NA	False	NA	NA	NA	100838055	100833952	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_-_100834130_100834212_100834891_100835166_100835250_100835786_100835944_100836542
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187376	chrX	-	2254	6	NIC	ENSMUSG00000045010.15	novel	1190	7	NA	NA	-12	1	intron_retention	FALSE	canonical	3	117	junction_2	83.8035798758024	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTACTTTTGCAACTGTT	NA	False	NA	NA	False	NA	NA	NA	100838041	100833952	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_-_100834130_100834212_100834505_100834844_100834891_100835166_100835250_100835786_100835944_100836542
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187401	chrX	+	2046	7	NIC	ENSMUSG00000046774.18	novel	1050	9	NA	NA	-43	-1	intron_retention	FALSE	canonical	3	47	junction_5	86.9329243344162	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTACTTTTGCAACTG	NA	False	NA	NA	False	NA	NA	NA	100838218	100842247	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841772_100841947_100841990_100842072
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187402	chrX	+	2230	6	NIC	ENSMUSG00000046774.18	novel	1991	7	NA	NA	-43	7	intron_retention	FALSE	canonical	3	236	junction_4	22.2656686403081	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCAACTGTTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	100838218	100842255	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841990_100842072
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187430	chrX	-	176	1	Intergenic	novelGene_5734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAGTAAGACAGTT	NA	False	NA	NA	False	NA	NA	NA	100964690	100964514	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_100964500_100964700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187434	chrX	-	185	1	Intergenic	novelGene_5735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTATATTGAAAGCTACA	NA	False	NA	NA	False	NA	NA	NA	101100135	101099950	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_101100000_101100100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187449	chrX	+	202	1	Intergenic	novelGene_5736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTACAGACTCAACTTTCC	NA	False	NA	NA	False	NA	NA	NA	101174717	101174919	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_101174700_101174900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187460	chrX	-	4088	2	FSM	ENSMUSG00000051220.3	ENSMUST00000056904.3	5302	2	-24	1238	-24	-1238	multi-exon	FALSE	canonical	3	249	junction_1	0	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCCATTCATTTTCTTT	NA	False	NA	0	True	ATTAAA	-18	NA	101200721	101186559	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_101190440_101200513
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187465	chrX	+	191	1	Intergenic	novelGene_5737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTCATGGTA	NA	False	NA	NA	False	NA	NA	NA	101195437	101195628	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_101195400_101195600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187469	chrX	-	990	7	FSM	ENSMUSG00000031320.10	ENSMUST00000033683.8	975	7	-14	-1	-14	1	multi-exon	FALSE	canonical	3	11043	junction_6	2028.67992108716	2555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTGCTGTTGCTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	101233014	101228545	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231609_101231899_101231978_101232903
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187482	chrX	-	1195	6	NIC	ENSMUSG00000031320.10	novel	975	7	NA	NA	12	-1	intron_retention	FALSE	canonical	3	11043	junction_5	2174.6576190288	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTTTGCTGTTGCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	101232930	101228547	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231978_101232903
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187487	chrX	-	219	1	Intergenic	novelGene_5738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAATATATTAAAACTACA	9130	False	NA	NA	False	NA	NA	NA	101259093	101258874	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_101258900_101259100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187493	chrX	-	175	1	Intergenic	novelGene_5739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCTGAGGAGTGAACAGA	4662	False	NA	0	True	NA	NA	NA	101263561	101263386	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_101263400_101263600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187512	chrX	-	1724	11	FSM	ENSMUSG00000067567.13	ENSMUST00000087916.11	1936	11	213	-1	0	1	multi-exon	FALSE	canonical	3	41	junction_1	12.0747670784989	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGTCCCACCGCTCTGTT	NA	False	NA	0	True	AATAAA	-16	NA	101548752	101328243	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_101328775_101351244_101351351_101446190_101446286_101449142_101449316_101471720_101471830_101472369_101472448_101476090_101476204_101541736_101541879_101543427_101543559_101548004_101548058_101548559
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187521	chrX	-	6115	33	FSM	ENSMUSG00000034055.17	ENSMUST00000052012.14	6115	33	-2	2	-2	-2	multi-exon	TRUE	canonical	3	40	junction_24	10.1886502418132	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTCTGGTGTTACTGCA	NA	False	NA	NA	False	AATAAA	-14	NA	101687854	101557582	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359_101564531_101571672_101571724_101575682_101575722_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101588913_101589071_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661022_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687452
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187553	chrX	-	224	1	Intergenic	novelGene_5740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGCTTCAGCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	102261360	102261136	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_102261100_102261400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187557	chrX	+	193	1	Intergenic	novelGene_5741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGAAAAGTTAGTCAAAGAA	NA	False	NA	NA	False	NA	NA	NA	102285446	102285639	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_102285400_102285600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187574	chrX	+	192	1	Intergenic	novelGene_5742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTACTGATTGATCTTCCA	NA	False	NA	NA	False	NA	NA	NA	102315391	102315583	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_102315400_102315600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187581	chrX	+	181	1	Intergenic	novelGene_5743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGAGAGAAAAGTAA	NA	False	NA	NA	False	NA	NA	NA	102333327	102333508	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_102333300_102333500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187586	chrX	+	180	1	Intergenic	novelGene_5744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGGGTTTGGTTCTCA	NA	False	NA	NA	False	NA	NA	NA	102380023	102380203	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_102380000_102380200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187596	chrX	+	201	1	Intergenic	novelGene_5745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTTTTTTAGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	102431061	102431262	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_102431100_102431300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187605	chrX	+	182	1	Intergenic	novelGene_5746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATATACTGAAAACCTTAA	NA	False	NA	NA	False	NA	NA	NA	102671397	102671579	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_102671400_102671600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187621	chrX	+	193	1	Intergenic	novelGene_5747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	443	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAGATCCCTTAGCAT	NA	False	NA	NA	False	NA	NA	NA	102973837	102974030	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_102973800_102974000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187630	chrX	-	7436	5	FSM	ENSMUSG00000056537.12	ENSMUST00000121153.8	7439	5	4	-1	4	1	multi-exon	FALSE	canonical	3	84	junction_4	53.7261575026541	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCTTTTTCATCCTTG	2377	False	NA	0	True	AATAAA	-17	NA	103024886	103000767	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_103007650_103008856_103008941_103010096_103010287_103022878_103022941_103024668
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187639	chrX	-	7424	5	FSM	ENSMUSG00000056537.12	ENSMUST00000070705.6	7429	5	4	1	4	-1	multi-exon	FALSE	canonical	3	128	junction_4	35.6300435026397	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGCTTTTTCATCCT	2377	False	NA	-2	True	AATAAA	-15	NA	103024886	103000769	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_103007650_103008856_103008941_103010096_103010287_103022878_103022941_103024678
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187657	chrX	-	185	1	Intergenic	novelGene_5748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCCCTTTTGGTTTGGGG	NA	False	NA	NA	False	NA	NA	NA	103155531	103155346	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_103155300_103155500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187666	chrX	+	256	1	Intergenic	novelGene_5749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCATATGCATTTCCT	NA	False	NA	NA	False	NA	NA	NA	103228453	103228709	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_103228500_103228700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187671	chrX	-	5781	16	FSM	ENSMUSG00000031333.8	ENSMUST00000033695.6	5667	16	-21	-93	-11	93	multi-exon	FALSE	canonical	3	253	junction_7	23.4516997725585	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGGAAGATGGCCTTGC	10031	False	NA	91	True	AATAAA	-19	NA	103457473	103324169	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103366939_103367060_103386099_103386187_103388530_103388609_103457262
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187683	chrX	-	3028	1	FSM	ENSMUSG00000083327.2	ENSMUST00000120233.2	2406	1	-272	-350	-272	350	mono-exon	FALSE	NA	NA	NA	NA	NA	1074	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCCAAGTCCTCTCTT	NA	False	NA	NA	False	AGTAAA	-15	NA	103392112	103389084	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_103389100_103392100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187691	chrX	+	178	1	Intergenic	novelGene_5750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAATTCATGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	103467552	103467730	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_103467600_103467700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187731	chrX	+	190	1	Intergenic	novelGene_5751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGTATGTCTCCATCTT	NA	False	NA	NA	False	NA	NA	NA	104194706	104194896	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_104194700_104194900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187762	chrX	+	192	1	Intergenic	novelGene_5752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATTCTAATACACAAGTA	NA	False	NA	NA	False	NA	NA	NA	104942609	104942801	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_104942600_104942800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187765	chrX	-	169	1	Intergenic	novelGene_5753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATGATGTCATTTC	NA	False	NA	NA	False	NA	NA	NA	104989246	104989077	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_104989100_104989200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187772	chrX	-	4526	10	FSM	ENSMUSG00000031232.18	ENSMUST00000238718.2	4524	10	-2	0	-2	0	multi-exon	FALSE	canonical	3	195	junction_8	15.5404688745065	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATGGTTTTTTTATTCT	NA	False	NA	NA	False	AATAAA	-16	NA	105055507	105011689	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187782	chrX	+	504	3	FSM	ENSMUSG00000031231.5	ENSMUST00000033582.5	1001	3	5	492	5	0	multi-exon	FALSE	canonical	3	7724	junction_1	851.5	303	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTAGGCTTTGTTTTTTTC	NA	False	NA	12	True	AATAAA	-24	NA	105059310	105065564	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_105059477_105063184_105063310_105065351
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187792	chrX	+	176	1	Intergenic	novelGene_5754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGACACACAGTAAAGA	NA	False	NA	NA	False	NA	NA	NA	105061343	105061519	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_105061300_105061500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187811	chrX	+	175	1	Intergenic	novelGene_5755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAGATTATATTT	1474	False	NA	NA	False	NA	NA	NA	105081693	105081868	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_105081700_105081900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187817	chrX	+	191	1	Intergenic	novelGene_5756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACTCATGCCGGTCGGCC	NA	False	NA	NA	False	NA	NA	NA	105219677	105219868	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_105219700_105219900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187823	chrX	-	179	1	Intergenic	novelGene_5757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAACTACCATAATT	NA	False	NA	NA	False	NA	NA	NA	105223843	105223664	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_105223700_105223800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187826	chrX	+	1831	11	FSM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	-6	0	-6	0	multi-exon	FALSE	canonical	3	3907	junction_10	353.61602056468	2262	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCCTGTCATACTTTG	NA	False	NA	NA	False	AATAAA	-20	NA	105230699	105247305	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_105230922_105235612_105235664_105237961_105238118_105238237_105238383_105240448_105240553_105241447_105241568_105243252_105243368_105243762_105243943_105246044_105246223_105246442_105246542_105246844
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187872	chrX	-	4293	24	NIC	ENSMUSG00000025665.17	novel	4170	24	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_23	62.1628144548264	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTAGTCTTGGTGTAGT	NA	False	NA	-6	True	ATTAAA	-31	NA	110373203	110297888	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546_110372799_110372967
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187875	chrX	-	4143	23	FSM	ENSMUSG00000025665.17	ENSMUST00000113428.9	4135	23	-7	-1	-7	0	multi-exon	FALSE	canonical	3	139	junction_4	54.455987232393	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTAGTCTTGGTGTAGT	NA	False	NA	-6	True	ATTAAA	-31	NA	110372899	110297888	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187877	chrX	-	4278	24	NIC	ENSMUSG00000025665.17	novel	4170	24	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_23	71.6464486948656	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTAGTCTTGGTGTAGT	NA	False	NA	-6	True	ATTAAA	-31	NA	110373203	110297888	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546_110372799_110372967
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187879	chrX	-	4151	23	FSM	ENSMUSG00000025665.17	ENSMUST00000096348.10	4151	23	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_4	39.3304500040447	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTAGTCTTGGTGTAGT	NA	False	NA	-6	True	ATTAAA	-31	NA	110372892	110297888	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187914	chrX	-	4882	15	FSM	ENSMUSG00000025531.15	ENSMUST00000026607.15	4868	15	-3	-11	-3	11	multi-exon	TRUE	canonical	3	145	junction_7	16.3001189428489	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTATTTTTTTATATTT	NA	False	NA	2	True	AATAAA	-27	NA	112095217	111950278	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_111953333_111957032_111957194_111962758_111962858_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112022245_112022363_112025712_112026128_112049032_112049158_112050410_112050484_112069200_112069268_112095137
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187931	chrX	+	191	1	Intergenic	novelGene_5758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGCAGAGGGGGCATGCA	NA	False	NA	NA	False	NA	NA	NA	114020621	114020812	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_114020600_114020800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187937	chrX	-	3103	2	Intergenic	novelGene_5759	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	91	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGAAAGCTTCATGGC	NA	False	NA	NA	False	NA	NA	NA	116231727	116226546	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_116227397_116229474
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187940	chrX	-	3117	2	Intergenic	novelGene_5760	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	91	junction_1	0	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGAAAGCTTCATGGC	NA	False	NA	NA	False	NA	NA	NA	116231727	116226546	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_116227411_116229474
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187952	chrX	-	5176	1	Intergenic	novelGene_5761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAGATGGAAAGCTTC	NA	False	NA	NA	False	NA	NA	NA	116231727	116226551	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_116226600_116231700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187960	chrX	+	202	1	Intergenic	novelGene_5762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACAGGAATATACAGGTAA	NA	False	NA	NA	False	NA	NA	NA	117370123	117370325	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_117370100_117370300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187966	chrX	+	178	1	Intergenic	novelGene_5763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGCAGCACCCTTGGCGG	NA	False	NA	NA	False	NA	NA	NA	117851543	117851721	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_117851500_117851700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187976	chrX	-	240	1	Intergenic	novelGene_5764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTCTAGCCTGGCTAAAA	NA	False	NA	NA	False	NA	NA	NA	128613662	128613422	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_128613400_128613700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000187985	chrX	-	196	1	Intergenic	novelGene_5765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	271	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAGCATACAGGTGAAGG	NA	False	NA	NA	False	NA	NA	NA	128660521	128660325	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_128660300_128660500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188004	chrX	+	2747	11	FSM	ENSMUSG00000031256.12	ENSMUST00000113286.8	2717	11	-24	-6	4	6	multi-exon	FALSE	canonical	3	451	junction_8	82.5556781814552	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGCTTTTTAAAAAATG	NA	False	NA	10	True	AATAAA	-25	NA	132959939	132976618	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188015	chrX	+	4427	14	FSM	ENSMUSG00000031256.12	ENSMUST00000113287.8	3661	14	10	-776	0	3	multi-exon	FALSE	canonical	3	157	junction_8	147.051615138335	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACTTAGAAATCTTTTG	NA	False	NA	15	True	AATAAA	-15	NA	132959945	132987571	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973962_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188032	chrX	+	200	1	Intergenic	novelGene_5766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGCATATACATTTTCC	NA	False	NA	NA	False	NA	NA	NA	133053551	133053751	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_133053600_133053800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188053	chrX	+	208	1	Intergenic	novelGene_5767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTAGGTCTCACTAGCT	NA	False	NA	NA	False	NA	NA	NA	133206912	133207120	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_133206900_133207100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188067	chrX	+	3172	23	FSM	ENSMUSG00000031262.13	ENSMUST00000081064.12	3227	23	59	-4	-12	4	multi-exon	FALSE	canonical	3	156	junction_9	42.2862392872416	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCGAATTTTTTTTTTTT	NA	False	NA	10	True	AATAAA	-21	NA	133208891	133263392	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_133208978_133209314_133209383_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188094	chrX	-	182	1	Intergenic	novelGene_5768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAATAAAAGACCTTCG	NA	False	NA	NA	False	NA	NA	NA	133448990	133448808	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_133448800_133449000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188099	chrX	-	197	1	Intergenic	novelGene_5769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGCAGTAACATATATGC	NA	False	NA	NA	False	NA	NA	NA	133476130	133475933	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_133475900_133476100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188104	chrX	+	500	5	FSM	ENSMUSG00000079435.10	ENSMUST00000113211.8	483	5	-11	-6	-11	0	multi-exon	FALSE	canonical	3	10431	junction_4	1336.12412877696	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTCTCCTGTTGAGTGG	NA	False	NA	81	True	ATTAAA	-22	NA	133486391	133488811	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_133486469_133486826_133486933_133487259_133487328_133488199_133488323_133488685
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188113	chrX	-	3047	7	FSM	ENSMUSG00000031266.8	ENSMUST00000239113.2	3015	7	-6	-26	-6	-11	multi-exon	FALSE	canonical	3	153	junction_5	18.580904176062	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACACTGCGTTTTCTTAT	NA	False	NA	NA	False	AATAAA	-5	NA	133501760	133488908	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_133490877_133491694_133491893_133492813_133492976_133494382_133494475_133495928_133496107_133497023_133497199_133501486
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188125	chrX	+	2393	3	FSM	ENSMUSG00000045427.14	ENSMUST00000074950.11	2426	3	39	-6	-7	0	multi-exon	FALSE	canonical	3	597	junction_2	148.5	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATAGTTTGATTTTC	NA	False	NA	NA	False	AATAAA	-25	NA	133501966	133507809	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_133502083_133503440_133503512_133505603
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188127	chrX	+	2438	4	FSM	ENSMUSG00000045427.14	ENSMUST00000059297.6	2364	4	-68	-6	-7	0	multi-exon	FALSE	canonical	3	164	junction_3	339.283886377699	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATAGTTTGATTTTC	NA	False	NA	NA	False	AATAAA	-25	NA	133501966	133507809	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_133502083_133503440_133503512_133503666_133503712_133505603
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188140	chrX	+	4463	2	ISM	ENSMUSG00000045427.14	ENSMUST00000059297.6	2364	4	-46	-6	15	0	intron_retention	FALSE	canonical	3	894	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATAGTTTGATTTTC	NA	False	NA	NA	False	AATAAA	-25	NA	133501988	133507809	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chrX_+_133502083_133503440
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188159	chrX	+	2175	4	FSM	ENSMUSG00000033460.15	ENSMUST00000113198.8	2085	4	-81	-9	-31	0	multi-exon	FALSE	canonical	3	131	junction_3	26.0895892391327	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	False	NA	NA	False	AATAAA	-27	NA	133618680	133622666	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_133618800_133619668_133619742_133620375_133620475_133620782
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188180	chrX	-	3443	6	FSM	ENSMUSG00000033436.14	ENSMUST00000113193.9	3666	6	225	-2	0	0	multi-exon	FALSE	canonical	3	17	junction_5	6.60302960768767	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTGTTCTGGTGCTTTA	NA	False	NA	-1	True	AATAAA	-21	NA	133709745	133704893	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_133707763_133708010_133708077_133708202_133708263_133708369_133708475_133708983_133709249_133709667
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188195	chrX	+	192	1	Intergenic	novelGene_5770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACTAAGACAGAAGTCAT	NA	False	NA	NA	False	NA	NA	NA	133799616	133799808	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_133799600_133799800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188207	chrX	-	3833	5	FSM	ENSMUSG00000079432.2	ENSMUST00000113183.2	3698	5	26	-161	26	161	multi-exon	FALSE	canonical	3	86	junction_3	56.4933624419719	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134078355	134068211	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_134070935_134071511_134072097_134073399_134073700_134077932_134078052_134078249
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188217	chrX	+	3833	5	FSM	ENSMUSG00000067360.13	ENSMUST00000118821.8	3698	5	26	-161	17	161	multi-exon	FALSE	canonical	3	77	junction_4	43.9964487203229	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134203081	134213562	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_134203188_134203385_134203513_134208081_134208382_134209685_134210271_134210847
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188226	chrX	+	3853	5	FSM	ENSMUSG00000094004.8	ENSMUST00000113173.8	3677	5	0	-176	0	9	multi-exon	FALSE	canonical	3	153	junction_2	39.7955713616478	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTTCTTCGTGAATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	134274032	134284151	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_134274160_134274357_134274485_134278675_134278976_134280276_134280862_134281437
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188234	chrX	+	3821	5	FSM	ENSMUSG00000094004.8	ENSMUST00000180198.2	3836	5	22	-7	22	7	multi-exon	FALSE	canonical	3	42	junction_2	73.5272058492637	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134274054	134284149	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_134274160_134274357_134274477_134278675_134278976_134280276_134280862_134281437
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188251	chrX	+	3830	5	FSM	ENSMUSG00000096508.8	ENSMUST00000113172.8	3677	5	21	-174	21	174	multi-exon	FALSE	canonical	3	153	junction_2	40.2336923485777	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134334604	134344753	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_134334711_134334908_134335036_134339279_134339580_134340880_134341466_134342041
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188265	chrX	+	3833	5	FSM	ENSMUSG00000054994.3	ENSMUST00000068340.3	3698	5	26	-161	26	161	multi-exon	FALSE	canonical	3	112	junction_2	53.6516542149448	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134395362	134405504	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_134395469_134395666_134395786_134400016_134400317_134401619_134402205_134402781
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188276	chrX	+	2810	4	FSM	ENSMUSG00000072969.3	ENSMUST00000096321.3	2779	4	-25	-6	-25	6	multi-exon	FALSE	canonical	3	91	junction_3	8.05536398239638	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTCCAGTTCTTTAGT	NA	False	NA	NA	False	AATAAA	-25	NA	134643456	134648077	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_134643728_134644311_134644364_134645247_134645325_134645667
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188295	chrX	+	5315	7	ISM	ENSMUSG00000043384.16	ENSMUST00000113144.8	5843	11	53407	7	-1448	1	3prime_fragment	TRUE	canonical	0	0	junction_1	59.1326193117358	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAATTGCCCCTTCACT	9790	False	NA	11	True	AATAAA	-18	NA	134696888	134704216	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chrX_+_134697086_134697697_134697787_134698301_134698379_134698536_134698614_134698771_134698844_134699139_134699223_134699496
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188308	chrX	+	5234	6	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1446	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	60.7302231183124	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAATTGCCCCTTCACT	9792	False	NA	11	True	AATAAA	-18	NA	134696890	134704216	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_+_134697096_134698301_134698379_134698536_134698614_134698771_134698844_134699139_134699223_134699496
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188326	chrX	-	226	1	Intergenic	novelGene_5771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGTCTACAAGAAACTCAA	NA	False	NA	NA	False	NA	NA	NA	134778909	134778683	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_134778700_134778900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188329	chrX	+	2798	5	FSM	ENSMUSG00000072964.15	ENSMUST00000180025.8	2812	5	17	-3	15	0	multi-exon	FALSE	canonical	0	0	junction_1	89.3168517134365	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGTTTGTGTATATGA	NA	False	NA	10	True	AATAAA	-21	NA	134786616	134791830	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_134786837_134787593_134787676_134788009_134788067_134789120_134789229_134789499
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188342	chrX	+	1559	1	FSM	ENSMUSG00000048040.9	ENSMUST00000058119.9	1532	1	-27	0	-27	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTAGGTCCATTATTT	NA	False	NA	20	True	AATAAA	-17	NA	134894545	134896104	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_134894500_134896100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188358	chrX	+	1593	1	FSM	ENSMUSG00000048355.3	ENSMUST00000057625.3	1580	1	-15	2	-15	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGTTTGCTTCCTTT	NA	False	NA	20	True	AATAGA	-14	NA	134934100	134935693	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_134934100_134935700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188361	chrX	-	838	3	FSM	ENSMUSG00000042750.8	ENSMUST00000049130.8	903	3	65	0	65	0	multi-exon	FALSE	canonical	3	901	junction_2	34	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGTAGTTCTTTAAAGG	4221	False	NA	0	True	AATAAA	-18	NA	134968920	134967312	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_134967957_134968348_134968422_134968799
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188384	chrX	+	861	3	FSM	ENSMUSG00000047844.4	ENSMUST00000116527.2	837	3	-20	-4	-20	4	multi-exon	FALSE	canonical	3	2369	junction_2	964	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCAGTCATCTTCTACTT	NA	False	NA	NA	False	AATAAA	-21	NA	135039724	135041196	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_135039916_135040271_135040349_135040603
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188393	chrX	+	787	3	NNC	ENSMUSG00000047844.4	novel	837	3	NA	NA	49	2	at_least_one_novel_splicesite	FALSE	canonical	3	216	junction_2	2040.5	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTCAGTCATCTTCTAC	NA	False	NA	NA	False	AATAAA	-19	NA	135039793	135041194	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_+_135039916_135040271_135040349_135040606
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188408	chrX	-	1150	3	FSM	ENSMUSG00000051579.11	ENSMUST00000060101.10	1250	3	102	-2	11	2	multi-exon	FALSE	canonical	3	703	junction_2	29	219	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTAAGACTTGGTCTT	NA	False	NA	NA	False	NA	NA	NA	135072989	135070827	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_135071799_135072384_135072455_135072880
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188416	chrX	-	888	3	FSM	ENSMUSG00000050071.9	ENSMUST00000058125.9	866	3	-21	-1	-21	1	multi-exon	FALSE	canonical	3	4595	junction_1	588.5	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTACTCATCTTTTCT	NA	False	NA	-1	True	AATAAA	-18	NA	135116283	135114719	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_135115333_135115652_135115730_135116085
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188426	chrX	-	692	3	FSM	ENSMUSG00000050071.9	ENSMUST00000113118.2	754	3	103	-41	-1	0	multi-exon	FALSE	canonical	3	367	junction_1	2702.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGTACTCATCTTTTC	NA	False	NA	-2	True	AATAAA	-17	NA	135116130	135114720	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_135115333_135115694_135115730_135116085
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188436	chrX	+	1032	3	FSM	ENSMUSG00000042712.11	ENSMUST00000048687.11	1019	3	-13	0	-13	0	multi-exon	FALSE	canonical	3	2732	junction_2	36	338	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAACAGCCCATCAATTTA	NA	False	NA	8	True	AATAAA	-24	NA	135145814	135147888	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_135145977_135146449_135146516_135147084
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188444	chrX	+	191	1	Intergenic	novelGene_5772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTTGGGCAGCCAGACA	NA	False	NA	NA	False	NA	NA	NA	135160283	135160474	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_135160300_135160500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188474	chrX	-	1870	4	FSM	ENSMUSG00000031422.17	ENSMUST00000080411.13	1859	4	0	-11	0	0	multi-exon	FALSE	canonical	3	2872	junction_1	198.526236721162	1582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	False	NA	NA	False	AATAAA	-34	NA	135642101	135633690	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135641958
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188475	chrX	-	1800	4	FSM	ENSMUSG00000031422.17	ENSMUST00000164609.8	1811	4	22	-11	-7	0	multi-exon	FALSE	canonical	3	42	junction_3	1452.09664508485	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	False	NA	NA	False	AATAAA	-34	NA	135643645	135633690	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135643572
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188476	chrX	-	1819	4	FSM	ENSMUSG00000031422.17	ENSMUST00000033797.13	1996	4	177	0	-132	0	multi-exon	FALSE	canonical	3	68	junction_3	1439.93989072075	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	False	NA	NA	False	AATAAA	-34	NA	135642233	135633690	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135642141
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188477	chrX	-	3117	3	FSM	ENSMUSG00000031422.17	ENSMUST00000131923.2	828	3	-801	-1488	-8	0	multi-exon	FALSE	canonical	3	2872	junction_1	225.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	False	NA	NA	False	AATAAA	-34	NA	135642033	135633690	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_135635251_135636294_135636372_135640553
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188478	chrX	-	1821	4	FSM	ENSMUSG00000031422.17	ENSMUST00000113097.8	1825	4	4	0	0	0	multi-exon	TRUE	canonical	3	47	junction_3	1449.75867723639	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	False	NA	NA	False	AATAAA	-34	NA	135644435	135633690	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135644341
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188483	chrX	-	1975	5	NIC	ENSMUSG00000031422.17	novel	1926	4	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_3	1536.30213499819	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	False	NA	NA	False	AATAAA	-34	NA	135642032	135633690	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_-_135635251_135636294_135636372_135640553_135640644_135641694_135641869_135641958
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188523	chrX	+	178	1	Intergenic	novelGene_5773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGAATTGTCGGTGT	NA	False	NA	NA	False	NA	NA	NA	135920928	135921106	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_135920900_135921100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188531	chrX	-	177	1	Intergenic	novelGene_5774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTAAAGAATTGT	NA	False	NA	NA	False	NA	NA	NA	135921912	135921735	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_135921700_135921900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188533	chrX	+	8301	6	FSM	ENSMUSG00000042595.8	ENSMUST00000047852.8	8299	6	-2	0	-2	0	multi-exon	FALSE	canonical	3	22	junction_5	9.32523458149981	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCATGTGTGTGTTTCTT	NA	False	NA	NA	False	AATAAA	-24	NA	135950340	135983252	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_135950819_135963406_135963627_135972247_135972398_135972762_135972925_135974637_135974905_135976228
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188538	chrX	-	1334	4	FSM	ENSMUSG00000023443.14	ENSMUST00000113066.9	1692	4	358	0	358	0	multi-exon	FALSE	canonical	3	42	junction_3	6.23609564462324	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGCTTTGAGAGTTATA	NA	False	NA	-1	True	AATAAA	-18	NA	136020562	136016145	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_136016755_136018006_136018053_136019115_136019552_136020319
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188589	chrX	-	2008	9	FSM	ENSMUSG00000072944.12	ENSMUST00000101212.9	1996	9	-9	-3	3	3	multi-exon	FALSE	canonical	3	147	junction_8	135.330151850946	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTGAACTGGGTTTTTG	NA	False	NA	-6	True	AATAAA	-19	NA	138963326	138907550	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_138908616_138922769_138922837_138925977_138926090_138928316_138928452_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138963161
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188605	chrX	+	1978	7	FSM	ENSMUSG00000031432.4	ENSMUST00000033809.4	1965	7	-10	-3	-10	3	multi-exon	FALSE	canonical	3	1771	junction_6	191.019850626403	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGTGTACTGTCATATCT	NA	False	NA	30	True	AATAAA	-22	NA	139357351	139376892	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_139357613_139365979_139366164_139368420_139368520_139369583_139369709_139372745_139372920_139374527_139374688_139375917
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188615	chrX	+	4991	6	NIC	ENSMUSG00000031432.4	novel	1965	7	NA	NA	11	0	intron_retention	FALSE	canonical	3	1771	junction_5	204.066263747833	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGGTGTACTGTCATA	NA	False	NA	27	True	AATAAA	-19	NA	139357372	139376889	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_139357613_139365979_139366164_139368420_139368520_139369583_139372920_139374527_139374688_139375917
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188626	chrX	+	205	1	Intergenic	novelGene_5775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTAGCTTCTTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	139410452	139410657	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_139410500_139410700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188630	chrX	-	1972	3	FSM	ENSMUSG00000031431.14	ENSMUST00000055738.12	1974	3	2	0	2	0	multi-exon	FALSE	canonical	3	154	junction_2	61	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTGTGAGTGCATAA	NA	False	NA	NA	False	AATAAA	-26	NA	139443934	139440276	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_139441857_139442853_139442906_139443594
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188639	chrX	-	1783	3	FSM	ENSMUSG00000031431.14	ENSMUST00000112995.3	1790	3	7	0	7	0	multi-exon	FALSE	canonical	3	51	junction_2	112.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTGTGAGTGCATAA	NA	False	NA	NA	False	AATAAA	-26	NA	139443410	139440276	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_139441857_139442853_139442906_139443259
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188656	chrX	-	1462	5	FSM	ENSMUSG00000031429.15	ENSMUST00000033805.15	1430	5	-22	-10	17	10	multi-exon	FALSE	canonical	3	522	junction_1	39.0024037720754	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTCATTCAAGTCAGTTA	NA	False	NA	2	True	AATAAA	-21	NA	139857460	139849167	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_139850059_139852895_139853063_139853153_139853301_139854548_139854648_139857302
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188693	chrX	+	2462	4	FSM	ENSMUSG00000042271.14	ENSMUST00000112914.8	2484	4	27	-5	-23	5	multi-exon	FALSE	canonical	3	263	junction_3	9.93310961716756	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGTCTTTCTTAAGGTT	NA	False	NA	16	True	AATAAA	-27	NA	141011199	141022693	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_141011378_141012519_141012607_141019779_141019925_141020641
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188700	chrX	-	5277	16	FSM	ENSMUSG00000031278.13	ENSMUST00000033634.5	5280	16	7	-4	7	4	multi-exon	TRUE	canonical	3	129	junction_14	18.9168942717585	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTTTCTTATATGT	NA	False	NA	1	True	AATAAA	-22	NA	141173524	141100984	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134905_141143382_141143433_141173300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188730	chrX	+	5290	7	FSM	ENSMUSG00000047045.18	ENSMUST00000087333.9	5149	7	-8	-133	4	133	multi-exon	FALSE	canonical	3	33	junction_2	37.6592913133296	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGAGTCCTGGCCTTGC	NA	False	NA	5	True	ATTAAA	-14	NA	141464405	141621367	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_141464553_141465286_141465946_141535035_141535086_141553962_141554030_141588985_141589065_141615496_141615598_141617180
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188741	chrX	-	5442	6	FSM	ENSMUSG00000042225.4	ENSMUST00000041317.3	5437	6	-5	0	-5	0	multi-exon	FALSE	canonical	3	79	junction_1	6.04648658313239	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTTTTAGATTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	141749729	141634141	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_141638644_141640471_141640569_141641876_141641968_141661105_141661221_141695168_141695280_141749203
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188753	chrX	-	173	1	Intergenic	novelGene_5776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTTTAGAATGAGTACAA	NA	False	NA	NA	False	NA	NA	NA	143021710	143021537	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_143021500_143021700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188761	chrX	+	182	1	Intergenic	novelGene_5777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGAACCTGGAAGATGAC	NA	False	NA	NA	False	NA	NA	NA	143032344	143032526	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_143032300_143032500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188766	chrX	+	178	1	Antisense	novelGene_ENSMUSG00000083200.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAGGTAATGATAG	NA	False	NA	NA	False	NA	NA	NA	143069709	143069887	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chrX_+_143069700_143069900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188771	chrX	+	4121	27	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	548	junction_3	189.502244292029	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143100961	143157446	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188787	chrX	+	4119	26	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_21	299.952273536975	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143100998	143157446	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188789	chrX	+	4188	27	FSM	ENSMUSG00000041718.17	ENSMUST00000154827.8	4168	27	-20	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	235.310423828037	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143100998	143157446	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188828	chrX	+	3860	25	NIC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-59	0	combination_of_known_junctions	TRUE	canonical	3	134	junction_1	227.828696459765	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143118805	143157446	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_143118899_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188843	chrX	+	3982	24	ISM	ENSMUSG00000041718.17	ENSMUST00000154827.8	4168	27	17874	0	28	0	3prime_fragment	FALSE	canonical	3	957	junction_21	118.352985224418	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143118892	143157446	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188867	chrX	+	185	1	Intergenic	novelGene_5778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGATGCCTATTCTGTT	8618	False	NA	NA	False	NA	NA	NA	144162358	144162543	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_144162400_144162500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188870	chrX	-	187	1	Intergenic	novelGene_5779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTTCCACCTTCTCAA	NA	False	NA	NA	False	NA	NA	NA	144375055	144374868	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_144374900_144375100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188877	chrX	+	2042	7	FSM	ENSMUSG00000079387.11	ENSMUST00000163338.2	2025	7	-17	0	-17	0	multi-exon	FALSE	canonical	1	5	junction_3	4.85626742811116	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTGTGTTTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	147665554	147707135	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_147665664_147686432_147686559_147687278_147687359_147690981_147691941_147698819_147698902_147699707_147699758_147706499
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188883	chrX	+	2045	7	FSM	ENSMUSG00000094885.8	ENSMUST00000177554.2	2028	7	-17	0	-17	0	multi-exon	TRUE	canonical	0	0	junction_1	5.58022301426107	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTGTGTTTGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	147880930	147921148	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_147881040_147898081_147898208_147898926_147899007_147902668_147903628_147912815_147912898_147913703_147913754_147920509
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188887	chrX	+	2045	7	FSM	ENSMUSG00000095621.2	ENSMUST00000178169.2	2028	7	-17	0	-17	0	multi-exon	TRUE	canonical	0	0	junction_1	6.67707520800338	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTGTGTTTGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	148230595	148270780	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_148230705_148247706_148247833_148248551_148248632_148252302_148253262_148262449_148262532_148263337_148263388_148270141
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188892	chrX	+	1994	7	FSM	ENSMUSG00000072923.7	ENSMUST00000101181.5	1977	7	-17	0	-17	0	multi-exon	FALSE	canonical	0	0	junction_1	5.06622805119022	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTGTGTTTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	148377548	148419760	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_148377658_148394767_148394894_148395612_148395693_148399354_148400266_148411437_148411520_148412325_148412376_148419124
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188904	chrX	+	2050	7	FSM	ENSMUSG00000094378.8	ENSMUST00000101180.8	2029	7	-17	-4	-17	4	multi-exon	TRUE	canonical	1	1	junction_6	4.6785562825394	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTGTGTTTGTTTGT	NA	False	NA	NA	False	AATAAA	-23	NA	148567451	148609694	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_148567561_148582582_148582709_148583428_148583509_148587159_148588119_148601122_148601205_148602010_148602061_148609050
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188915	chrX	-	1203	3	FSM	ENSMUSG00000041353.13	ENSMUST00000151067.8	864	3	3	-342	-1	0	multi-exon	FALSE	canonical	0	0	junction_2	131	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGACTTGAGAGGTATT	NA	False	NA	NA	False	GATAAA	-21	NA	149242147	149191573	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_149192597_149203337_149203438_149242067
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188935	chrX	+	185	1	Intergenic	novelGene_5780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACAAGCCCAGTCAGCAT	NA	False	NA	NA	False	NA	NA	NA	149361761	149361946	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_149361800_149361900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188940	chrX	+	2078	16	NIC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	14	junction_2	17.6227126175286	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTTTCATTGTTCTC	NA	False	NA	19	True	AATAAA	-37	NA	149371224	149426874	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_149371339_149371940_149372041_149372791_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188943	chrX	+	1903	16	NIC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_2	10.2058806577385	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTTTCATTGTTCTC	NA	False	NA	19	True	AATAAA	-37	NA	149371242	149426874	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_149371339_149371940_149372041_149372948_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188949	chrX	+	1974	16	NNC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	17.7330827049958	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTTTCATTGTTCTC	NA	False	NA	19	True	AATAAA	-37	NA	149371242	149426874	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_+_149371410_149371940_149372041_149372948_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188956	chrX	-	6569	13	FSM	ENSMUSG00000025272.17	ENSMUST00000112709.8	6610	13	37	4	0	0	multi-exon	FALSE	canonical	3	18	junction_12	3.93964888452427	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGCTTATTCTGTCCTT	NA	False	NA	-21	True	ATTAAA	-14	NA	149440395	149428303	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_149428518_149428689_149432652_149433429_149433545_149433972_149434036_149434411_149434455_149434548_149434629_149435279_149435372_149435836_149435917_149436115_149436180_149436287_149436393_149436984_149438611_149438879_149438950_149440340
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188959	chrX	+	187	1	Intergenic	novelGene_5781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAACACTTACTCATCCT	NA	False	NA	NA	False	NA	NA	NA	149504329	149504516	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_149504300_149504500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188968	chrX	-	2236	12	ISM	ENSMUSG00000025268.16	ENSMUST00000112700.8	2107	13	749	0	0	0	3prime_fragment	FALSE	canonical	3	154	junction_9	18.0545546095372	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTGCCATTTTTGTTT	NA	False	NA	0	True	NA	NA	NA	149595954	149589416	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188976	chrX	-	2074	13	FSM	ENSMUSG00000025268.16	ENSMUST00000112699.9	2183	13	58	51	-6	0	multi-exon	FALSE	canonical	3	26	junction_12	47.4332864839309	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTGCCATTTTTGTTT	NA	False	NA	0	True	NA	NA	NA	149597283	149589416	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149597224
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188986	chrX	-	2090	13	FSM	ENSMUSG00000025268.16	ENSMUST00000112700.8	2107	13	17	0	17	0	multi-exon	FALSE	canonical	3	63	junction_12	38.0929965858409	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTGCCATTTTTGTTT	NA	False	NA	0	True	NA	NA	NA	149596686	149589416	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149596611
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188994	chrX	+	220	1	Intergenic	novelGene_5782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGGGGGAGATGCACAT	NA	False	NA	NA	False	TTTAAA	-7	NA	149673553	149673773	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_149673600_149673800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000188996	chrX	-	4882	16	FSM	ENSMUSG00000025266.12	ENSMUST00000112691.9	4869	16	-4	-9	-4	9	multi-exon	FALSE	canonical	3	473	junction_8	38.4461528201024	221	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTTTTCATTTCTTTGG	NA	False	NA	-7	True	NA	NA	NA	149800322	149766127	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189011	chrX	+	147	1	Intergenic	novelGene_5783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCGCAAAAGGAAGGTGAT	6251	False	NA	NA	False	NA	NA	NA	149790707	149790854	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_149790700_149790900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189017	chrX	+	204	1	Intergenic	novelGene_5784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACCCCGGCACGGTGTGG	9275	False	NA	NA	False	NA	NA	NA	149793731	149793935	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_149793700_149793900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189023	chrX	-	212	1	Intergenic	novelGene_5785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTTACATGACATATGAT	NA	False	NA	NA	False	NA	NA	NA	149823107	149822895	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_149822900_149823100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189031	chrX	+	4446	18	FSM	ENSMUSG00000025265.15	ENSMUST00000026296.8	4001	18	-281	-164	-281	164	multi-exon	FALSE	canonical	3	331	junction_3	37.9662935558211	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTCTTAAGCCTCATC	NA	False	NA	12	True	ATTAAA	-21	NA	149829884	149872681	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189041	chrX	+	198	1	Intergenic	novelGene_5786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTGAAGCTTATGAACT	NA	False	NA	NA	False	NA	NA	NA	149854092	149854290	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_149854100_149854300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189044	chrX	-	3796	5	FSM	ENSMUSG00000025264.13	ENSMUST00000112683.9	3796	5	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_1	26.3201443765037	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCATTTTCCTTGTTTCA	NA	False	NA	-1	True	AAAAAG	-18	NA	149879539	149870089	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_149873411_149873600_149873778_149874671_149874764_149879160_149879252_149879424
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189051	chrX	-	1400	5	FSM	ENSMUSG00000025264.13	ENSMUST00000026295.10	3804	5	18	2386	-2	0	multi-exon	FALSE	canonical	3	72	junction_1	125.415310070182	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATCCATTGTCCTCCCC	NA	False	NA	-3	True	AATAAA	-21	NA	149879521	149872476	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_149873411_149873591_149873778_149874671_149874764_149879160_149879252_149879424
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189057	chrX	-	1300	4	FSM	ENSMUSG00000025264.13	ENSMUST00000166010.2	1318	4	18	0	-2	0	multi-exon	FALSE	canonical	3	44	junction_3	140.42158745087	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATCCATTGTCCTCCCC	NA	False	NA	-3	True	AATAAA	-21	NA	149879521	149872476	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_149873411_149873600_149873778_149874671_149874764_149879424
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189065	chrX	+	192	2	Antisense	novelGene_ENSMUSG00000025264.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	153	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTGCCTTGGTTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	149875434	149910426	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chrX_+_149875487_149910286
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189073	chrX	+	184	1	Intergenic	novelGene_5787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCGGTTTTGCTGAGA	NA	False	NA	NA	False	NA	NA	NA	149885899	149886083	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_149885900_149886100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189083	chrX	-	188	1	Intergenic	novelGene_5788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATAAATAAAACCTACT	NA	False	NA	NA	False	NA	NA	NA	149956231	149956043	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_149956000_149956200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189089	chrX	-	180	1	Intergenic	novelGene_5789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGGCTGGTGAGATGGC	NA	False	NA	NA	False	NA	NA	NA	149997192	149997012	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_149997000_149997200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189099	chrX	+	5716	21	NNC	ENSMUSG00000041229.16	novel	6359	22	NA	NA	-7	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	23.7762486528048	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGCTTGACATTATT	NA	False	NA	6	True	GATAAA	-19	NA	150303660	150416855	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_+_150304085_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189114	chrX	+	5436	21	NIC	ENSMUSG00000041229.16	novel	5728	22	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_12	14.924727803213	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGCTTGACATTATT	NA	False	NA	6	True	GATAAA	-19	NA	150304171	150416855	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_150304316_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189125	chrX	+	186	1	Intergenic	novelGene_5790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATTTGTTTCCTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	150497367	150497553	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_150497400_150497600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189140	chrX	+	926	6	FSM	ENSMUSG00000025260.11	ENSMUST00000026289.10	962	6	36	0	36	0	multi-exon	FALSE	canonical	3	1359	junction_1	187.651165730459	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGCAGTCTTGTGTG	NA	False	NA	16	True	AATAAA	-16	NA	150784876	150787438	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_150784931_150785273_150785439_150786356_150786522_150786648_150786778_150786857_150786967_150787134
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189144	chrX	-	1504	8	FSM	ENSMUSG00000025257.6	ENSMUST00000026288.5	1508	8	6	-2	6	2	multi-exon	FALSE	canonical	3	80	junction_7	14.6816559150582	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGTGTCGTAAGAGTACA	NA	False	NA	0	True	AATAAA	-19	NA	150799285	150787575	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_150787807_150787914_150788310_150788734_150788854_150790211_150790557_150790742_150790825_150792520_150792638_150798776_150798865_150799158
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189155	chrX	+	3976	25	FSM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	-5	720	-5	-720	multi-exon	TRUE	canonical	3	535	junction_3	101.202320735358	505	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATCTAAATTTGATTCC	NA	False	NA	21	True	AATAAA	-25	NA	150799418	150844970	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189173	chrX	+	201	1	Intergenic	novelGene_5791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTATCCCTTCCAATAA	NA	False	NA	NA	False	NA	NA	NA	150923598	150923799	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_150923600_150923800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189179	chrX	+	6464	26	FSM	ENSMUSG00000025332.15	ENSMUST00000112584.8	5900	26	201	-765	-8	-2	multi-exon	FALSE	canonical	3	193	junction_24	80.1180528969595	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCCTTTTGTGTCTGCCT	NA	False	NA	18	True	NA	NA	NA	151016216	151057529	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054935_151055070_151055271_151055704
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189214	chrX	+	192	1	Intergenic	novelGene_5792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCTGGCTGTGCAACCA	NA	False	NA	NA	False	NA	NA	NA	151064309	151064501	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_151064300_151064500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189224	chrX	-	4235	3	FSM	ENSMUSG00000087403.10	ENSMUST00000148326.8	584	3	25	-3676	0	4	multi-exon	FALSE	canonical	3	54	junction_1	13.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTGTGACTTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	151110466	151077819	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_151081871_151110156_151110236_151110361
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189237	chrX	+	179	1	Intergenic	novelGene_5793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGTAGCTACATCTTAT	NA	False	NA	NA	False	NA	NA	NA	151112613	151112792	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_151112600_151112800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189244	chrX	-	2753	7	FSM	ENSMUSG00000041096.14	ENSMUST00000044509.7	2696	7	-54	-3	-54	0	multi-exon	FALSE	canonical	3	155	junction_2	16.4189930669738	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTGGAGTCTTTTGTCC	NA	False	NA	-1	True	AATAAA	-20	NA	151125475	151119847	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_151120562_151121720_151122389_151122628_151122724_151122857_151123004_151123081_151123194_151123298_151123377_151124535
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189252	chrX	-	2724	7	NIC	ENSMUSG00000041096.14	novel	2696	7	NA	NA	-25	0	intron_retention	FALSE	canonical	3	44	junction_2	53.7339123211155	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTCTTGGAGTCTTTTG	NA	False	NA	-4	True	AATAAA	-17	NA	151125446	151119850	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_-_151120562_151121720_151122392_151122628_151122724_151122857_151123004_151123081_151123194_151123298_151123377_151124535
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189262	chrX	-	189	1	Intergenic	novelGene_5794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAACCCAGGTCCTCTGGA	NA	False	NA	NA	False	NA	NA	NA	151154965	151154776	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_151154800_151155000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189271	chrX	+	178	1	Intergenic	novelGene_5795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGGCTTCTGGTCCCCAG	NA	False	NA	NA	False	NA	NA	NA	151388519	151388697	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_151388500_151388700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189287	chrX	+	194	1	Intergenic	novelGene_5796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAGACATTACTTCTCTT	NA	False	NA	NA	False	NA	NA	NA	151539637	151539831	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_151539600_151539800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189295	chrX	-	1430	1	FSM	ENSMUSG00000047238.5	ENSMUST00000051484.5	1410	1	-20	0	-20	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTTCATTTATTGTC	NA	False	NA	NA	False	AATAAA	-17	NA	151820591	151819161	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_151819200_151820600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189325	chrX	-	233	1	Intergenic	novelGene_5797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTTAATTTTCCTAATC	NA	False	NA	NA	False	AAAAAG	-31	NA	151994163	151993930	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_151993900_151994200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189329	chrX	-	178	1	Intergenic	novelGene_5798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGAGAGGGAGAGGAG	NA	False	NA	NA	False	NA	NA	NA	152002022	152001844	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_152001800_152002000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189345	chrX	-	180	1	Intergenic	novelGene_5799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAATGTATAAATTTCTCA	NA	False	NA	NA	False	NA	NA	NA	152084858	152084678	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_152084700_152084900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189363	chrX	+	3409	1	FSM	ENSMUSG00000050148.10	ENSMUST00000060714.10	3344	1	-69	4	-69	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCTCTTTTATTTTGCC	7263	False	NA	9	True	ATTAAA	-36	NA	152281153	152284562	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_152281200_152284600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189373	chrX	-	182	1	Intergenic	novelGene_5800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGAATCCTAGAG	4295	False	NA	NA	False	NA	NA	NA	152291183	152291001	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_152291000_152291200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189388	chrX	-	1764	5	NNC	ENSMUSG00000079350.3	novel	1646	4	NA	NA	-9	5	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	13.4233937586588	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTAGTTTCTTGTTGTG	NA	False	NA	0	True	AATAAA	-21	NA	153778855	153768765	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_-_153770173_153771107_153771197_153777179_153777280_153777995_153778100_153778791
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189396	chrX	+	187	1	Intergenic	novelGene_5801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAGATTCGTTTGCATTC	NA	False	NA	NA	False	NA	NA	NA	153825073	153825260	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_153825100_153825300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189397	chrX	-	1656	4	FSM	ENSMUSG00000079349.10	ENSMUST00000069556.4	1360	4	-9	-287	-9	3	multi-exon	FALSE	canonical	3	37	junction_1	7.03957069398096	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTAGTTTCTTTTTGTG	NA	False	NA	3	True	AATAAA	-21	NA	153846150	153836053	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_153837456_153838390_153838480_153844474_153844576_153846086
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189410	chrX	-	1164	6	FSM	ENSMUSG00000025283.16	ENSMUST00000026318.15	1162	6	-2	0	-2	0	multi-exon	FALSE	canonical	3	1003	junction_1	103.839106313566	237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAGCATTTTTACTAGT	NA	False	NA	-7	True	AATAAA	-24	NA	153999447	153996127	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_153996664_153996892_153996934_153997028_153997131_153998596_153998681_153998780_153998833_153999098
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189426	chrX	-	181	1	Intergenic	novelGene_5802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTATTTAAAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	154036776	154036595	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_154036600_154036800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189433	chrX	+	1731	15	FSM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	21	0	21	0	multi-exon	FALSE	canonical	2	666	junction_2	111.349262068796	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGAGTCTCCCATGTTGT	NA	False	NA	26	True	AATAAA	-20	NA	154045459	154080650	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_154045671_154052654_154052750_154054947_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189439	chrX	+	2308	14	ISM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	52	6	-10	2	intron_retention	FALSE	canonical	2	666	junction_2	113.313984889764	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACGATTGTGAGTCTCCCA	NA	False	NA	20	True	AATAAA	-14	NA	154045490	154080644	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_chrX_+_154045671_154052654_154052750_154054947_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189442	chrX	-	4189	2	Genic_Genomic	ENSMUSG00000052157.5	novel	1551	1	NA	NA	-388	3498	multi-exon	FALSE	canonical	3	17	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTCATCTATTTTTTGA	NA	False	NA	NA	False	NA	NA	NA	154089133	154083696	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Genic_Genomic_chrX_-_154086142_154087389
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189447	chrX	-	194	1	Intergenic	novelGene_5803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTGCATGAATGCTTT	NA	False	NA	NA	False	NA	NA	NA	154089858	154089664	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_154089700_154089900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189459	chrX	-	1029	7	FSM	ENSMUSG00000025289.16	ENSMUST00000026328.11	990	7	-39	0	-32	0	multi-exon	FALSE	canonical	3	951	junction_2	71.6488349909163	230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTTTGCCATTGTAATTT	NA	False	NA	-1	True	AATAAA	-22	NA	154121502	154106913	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_154107025_154109590_154109626_154111441_154111573_154113298_154113422_154115351_154115469_154117833_154117952_154121108
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189481	chrX	-	4765	11	FSM	ENSMUSG00000046873.19	ENSMUST00000058098.15	4797	11	35	-3	-1	3	multi-exon	FALSE	canonical	3	154	junction_9	30.3809150619266	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGTATCATATTTTTT	NA	False	NA	-2	True	AATAAA	-38	NA	156381676	156330816	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189507	chrX	-	2877	1	FSM	ENSMUSG00000091736.4	ENSMUST00000065806.5	2867	1	-5	-5	-5	5	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTGCTTGTGTGAATAT	NA	False	NA	NA	False	AATAAA	-21	NA	156351986	156349109	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_156349100_156352000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189514	chrX	+	181	1	Intergenic	novelGene_5804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTTAAAAAGAGGAGTTAA	NA	False	NA	NA	False	NA	NA	NA	156356477	156356658	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_156356500_156356700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189519	chrX	-	186	1	Intergenic	novelGene_5805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAAAGAAAAGAAATGCTA	NA	False	NA	NA	False	NA	NA	NA	156382337	156382151	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_156382200_156382300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189522	chrX	-	160	1	Intergenic	novelGene_5806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAACAAATTTCAAG	NA	False	NA	NA	False	NA	NA	NA	156387337	156387177	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_156387200_156387300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189534	chrX	+	171	1	Intergenic	novelGene_5807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAGAGTGGTAGGG	NA	False	NA	NA	False	NA	NA	NA	156785332	156785503	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_156785300_156785500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189542	chrX	+	4866	7	FSM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	-3	309	-3	-309	multi-exon	FALSE	canonical	3	2276	junction_6	179.511064344854	367	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATGTATATAGTTGTTTGT	5344	False	NA	NA	False	NA	NA	NA	158155170	158172615	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_158155412_158159376_158159461_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189554	chrX	+	164	1	Intergenic	novelGene_5808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAGAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	158164898	158165062	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_158164900_158165100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189562	chrX	-	237	1	Intergenic	novelGene_5809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTGCTGGAATCCCAAT	NA	False	NA	NA	False	NA	NA	NA	158189948	158189711	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_158189700_158189900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189568	chrX	+	3635	16	NIC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	1	49	junction_5	30.6328799386106	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGCCATTGACCTTGA	NA	False	NA	7	True	AATAAA	-18	NA	158197503	158281753	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158272272_158272496_158273675_158273781_158274763_158274821_158275319_158275408_158275893_158276081_158279030_158279306_158280579
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189577	chrX	+	194	1	Intergenic	novelGene_5810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATGATTAACCTAAAAATA	9776	False	NA	NA	False	NA	NA	NA	158258549	158258743	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_158258500_158258700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189590	chrX	+	217	1	Intergenic	novelGene_5811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	522	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGTCAAAAGAAAGGGTAG	NA	False	NA	NA	False	NA	NA	NA	158276481	158276698	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_158276500_158276700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189597	chrX	+	189	1	Intergenic	novelGene_5812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCCATCCATTGTTTGGC	NA	False	NA	NA	False	NA	NA	NA	158287229	158287418	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_158287200_158287400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189608	chrX	+	3366	12	FSM	ENSMUSG00000044150.13	ENSMUST00000112464.8	3366	12	0	0	0	0	multi-exon	TRUE	canonical	3	339	junction_9	109.675027103931	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158315663	158376077	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189620	chrX	+	3378	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	7	-7	at_least_one_novel_splicesite	FALSE	canonical	3	151	junction_11	167.554634539172	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCAGTTGGTGAGAGCA	NA	False	NA	16	True	AATAAA	-29	NA	158315670	158376070	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158374327_158374354_158375066
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189661	chrX	+	3225	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-4	-7	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_9	160.572169094159	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCAGTTGGTGAGAGCA	NA	False	NA	16	True	AATAAA	-29	NA	158315710	158376070	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349452_158350914_158351011_158357940_158358094_158375066
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189675	chrX	+	4570	29	FSM	ENSMUSG00000031303.9	ENSMUST00000033665.9	4348	29	-227	5	-227	-5	multi-exon	FALSE	canonical	3	16	junction_1	11.3624762858691	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGACTGAAGTTCCCTTAT	NA	False	NA	8	True	ATTAAA	-16	NA	158771201	158906342	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_158771802_158784900_158785041_158787158_158787183_158823985_158824180_158827056_158827226_158829612_158829720_158855833_158856005_158858590_158858704_158859124_158859285_158862909_158863061_158864780_158864889_158866859_158866910_158869313_158869410_158872799_158872888_158874576_158874711_158877291_158877420_158880972_158881104_158881316_158881423_158895401_158895560_158898054_158898239_158898880_158899047_158899514_158899690_158900650_158900837_158901536_158901643_158902505_158902720_158904641_158904755_158905357_158905459_158905529_158905607_158905922
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189699	chrX	-	187	1	Intergenic	novelGene_5813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATATCATCCTGAGTGA	NA	False	NA	NA	False	NA	NA	NA	159195176	159194989	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_159195000_159195200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189716	chrX	-	182	1	Intergenic	novelGene_5814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGAAAGTTGC	NA	False	NA	NA	False	NA	NA	NA	159451104	159450922	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_159450900_159451100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189718	chrX	-	240	1	Intergenic	novelGene_5815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTATGACCTTGAGATTTT	NA	False	NA	NA	False	NA	NA	NA	159552804	159552564	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_159552600_159552800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189727	chrX	-	177	1	Intergenic	novelGene_5816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGTGCTAGGCAGG	NA	False	NA	NA	False	NA	NA	NA	159769548	159769371	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_159769400_159769500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189750	chrX	+	4446	25	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12799	-6	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_15	104.117313308381	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	8020	False	NA	13	True	AATAAA	-22	NA	159932946	160041203	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_+_159933107_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189759	chrX	-	177	1	Intergenic	novelGene_5817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTAAAAAGAAGAGAGT	NA	False	NA	NA	False	NA	NA	NA	160396132	160395955	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_160396000_160396100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189770	chrX	+	517	1	FSM	ENSMUSG00000059461.8	ENSMUST00000118642.2	387	1	-42	-88	-42	88	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGTCTTAAAAGTAGGAA	NA	False	NA	NA	False	NA	NA	NA	161349810	161350327	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_161349800_161350300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189775	chrX	-	176	1	Intergenic	novelGene_5818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGGAGTGAGTGGGGCC	NA	False	NA	NA	False	NA	NA	NA	161388842	161388666	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_161388700_161388800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189779	chrX	+	189	1	Intergenic	novelGene_5819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTGAGAGATAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	161444459	161444648	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_161444500_161444600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189785	chrX	-	195	1	Intergenic	novelGene_5820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTTTTGTGATTATTT	NA	False	NA	NA	False	NA	NA	NA	161487995	161487800	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_161487800_161488000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189789	chrX	+	187	2	Intergenic	novelGene_5822	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTCAAACTGTAACATAT	NA	False	NA	NA	False	NA	NA	NA	161491681	161596514	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_161491829_161596474
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189794	chrX	+	195	1	Intergenic	novelGene_5821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAAAGGGCTGGGG	NA	False	NA	NA	False	NA	NA	NA	161491681	161491876	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_161491700_161491900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189803	chrX	+	187	1	Intergenic	novelGene_5823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAATATATCCATAGCA	NA	False	NA	NA	False	NA	NA	NA	161503742	161503929	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_161503700_161503900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189810	chrX	-	179	1	Intergenic	novelGene_5824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAGAATGGAGCA	NA	False	NA	NA	False	NA	NA	NA	161527190	161527011	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_161527000_161527200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189825	chrX	+	2279	12	FSM	ENSMUSG00000031353.14	ENSMUST00000033720.12	2244	12	-29	-6	-29	6	multi-exon	FALSE	canonical	3	2711	junction_3	173.446540695797	504	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCATCATTTTTTCAC	NA	False	NA	NA	False	AATAAA	-23	NA	161543368	161562094	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189832	chrX	+	190	1	Intergenic	novelGene_5825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTATATGGTATGAAGAA	NA	False	NA	NA	False	NA	NA	NA	161548452	161548642	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_161548500_161548600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189868	chrX	+	194	1	Intergenic	novelGene_5826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGAGCCACTGGATGGG	NA	False	NA	NA	False	NA	NA	NA	161597319	161597513	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_161597300_161597500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189874	chrX	+	179	1	Intergenic	novelGene_5827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCAAAGACAATGGAGCG	NA	False	NA	NA	False	NA	NA	NA	161618930	161619109	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_161618900_161619100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189885	chrX	-	163	1	Intergenic	novelGene_5828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAAGTGCTTGTTTCG	NA	False	NA	0	True	NA	NA	NA	161633755	161633592	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_161633600_161633800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189891	chrX	-	2326	9	FSM	ENSMUSG00000031357.4	ENSMUST00000033723.4	2087	9	-25	-214	-25	214	multi-exon	FALSE	canonical	3	113	junction_1	15.2105021284637	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTACGTATTTATATTCTT	NA	False	NA	2	True	AATAAA	-26	NA	161671468	161639838	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_161641005_161642294_161642443_161642868_161642928_161646055_161646205_161655510_161655651_161661326_161661401_161665675_161665743_161665963_161666083_161671064
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189903	chrX	+	194	1	Antisense	novelGene_ENSMUSG00000092752.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCTTTCTTTTTTGTA	NA	False	NA	NA	False	NA	NA	NA	161657967	161658161	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Antisense_chrX_+_161658000_161658200
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189910	chrX	-	235	1	Intergenic	novelGene_5829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAGAAAGTAGGGAAAAG	NA	False	NA	NA	False	AAGAAA	-36	NA	161677661	161677426	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_161677400_161677700
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189919	chrX	+	2231	19	FSM	ENSMUSG00000031360.15	ENSMUST00000033727.14	3353	19	-49	1171	-22	18	multi-exon	TRUE	canonical	2	133	junction_1	30.7828415409191	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTTTGTGTTTTCTCCA	NA	False	NA	29	True	ATTAAA	-35	NA	161684578	161814333	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_161684744_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189930	chrX	-	184	1	Intergenic	novelGene_5830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACAGTGCTGCCCCAGGG	NA	False	NA	NA	False	NA	NA	NA	161718140	161717956	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_161718000_161718100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189980	chrX	-	1540	6	NIC	ENSMUSG00000031370.13	novel	460	6	NA	NA	-5	978	combination_of_known_junctions	FALSE	canonical	3	185	junction_5	227.558695724861	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCCTTGAAGATATTTT	NA	False	NA	-10	True	AATATA	-15	NA	162741662	162735608	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741583
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189981	chrX	-	1719	5	FSM	ENSMUSG00000031370.13	ENSMUST00000090840.10	3867	5	-79	2227	-16	978	multi-exon	FALSE	canonical	3	635	junction_1	78.6924392810389	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCCTTGAAGATATTTT	NA	False	NA	-10	True	AATATA	-15	NA	162741673	162735608	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189989	chrX	-	2004	4	FSM	ENSMUSG00000040749.12	ENSMUST00000134272.2	803	4	-15	-1186	-15	6	multi-exon	FALSE	canonical	3	72	junction_3	219.75794765049	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTTCTCACTTTTGTAC	NA	False	NA	-12	True	AATAAA	-21	NA	162859504	162853694	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_162855224_162856285_162856347_162858573_162858666_162859182
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000189990	chrX	-	1750	4	FSM	ENSMUSG00000040749.12	ENSMUST00000071667.9	1712	4	-32	-6	-32	6	multi-exon	FALSE	canonical	3	301	junction_3	112.11402925395	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTTCTCACTTTTGTAC	NA	False	NA	-12	True	AATAAA	-21	NA	162859178	162853694	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_162855224_162856285_162856347_162858573_162858666_162859110
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190010	chrX	-	1792	4	FSM	ENSMUSG00000040749.12	ENSMUST00000037928.9	1783	4	-7	-2	-7	2	multi-exon	FALSE	canonical	3	101	junction_3	206.108385726216	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGTTTTTCTCACTTTT	NA	False	NA	-16	True	AATAAA	-17	NA	162859124	162853698	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_162855224_162856285_162856347_162858573_162858666_162859010
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190024	chrX	+	3601	6	FSM	ENSMUSG00000031381.17	ENSMUST00000033754.15	3594	6	-7	0	-7	0	multi-exon	FALSE	canonical	3	160	junction_2	38.4052079801685	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTCAGTTTGTCTT	NA	False	NA	28	True	AATAAA	-28	NA	163202775	163216912	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_163202837_163205579_163206360_163210927_163211061_163211535_163211669_163211806_163212014_163214625
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190033	chrX	+	3194	6	FSM	ENSMUSG00000031381.17	ENSMUST00000112257.10	3212	6	23	-5	3	0	multi-exon	FALSE	canonical	3	48	junction_2	78.77715404862	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTCAGTTTGTCTT	NA	False	NA	28	True	AATAAA	-28	NA	163202805	163216912	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_163202837_163205579_163205983_163210927_163211061_163211535_163211669_163211806_163212014_163214625
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190049	chrX	-	4049	15	FSM	ENSMUSG00000061778.11	ENSMUST00000004715.2	2015	15	6	-2040	-1	0	multi-exon	FALSE	canonical	3	42	junction_12	10.321366781822	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTCTCTAATTGATA	NA	False	NA	NA	False	AATAAA	-18	NA	163763325	163719164	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_163721689_163722638_163722742_163726426_163726557_163727212_163727310_163727968_163728066_163730237_163730351_163731062_163731240_163734846_163734972_163739474_163739514_163741751_163741813_163745047_163745203_163746922_163747010_163747977_163748134_163762989_163763060_163763210
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190056	chrX	+	2871	9	FSM	ENSMUSG00000047757.18	ENSMUST00000167446.8	2953	9	85	-3	-35	0	multi-exon	TRUE	canonical	3	98	junction_5	7.72981241687015	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGTTTTCTTTTACTGG	NA	False	NA	NA	False	ATTAAA	-20	NA	163763672	163780268	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_163763807_163765432_163766450_163769555_163769709_163770700_163770794_163774540_163774685_163775726_163775891_163778339_163778768_163778882_163779118_163779765
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190063	chrX	-	210	1	Intergenic	novelGene_5831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTAAAACAAATACATTGAA	NA	False	NA	NA	False	NA	NA	NA	163892431	163892221	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_-_163892200_163892400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190075	chrX	-	3554	23	FSM	ENSMUSG00000040586.9	ENSMUST00000049501.9	4453	23	-4	903	-4	-903	multi-exon	FALSE	canonical	3	107	junction_14	25.8655535317559	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGTATTTTTTTAACA	NA	False	NA	NA	False	ATTAAA	-14	NA	165223704	165173931	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_165174055_165174886_165174955_165175413_165175567_165176172_165176328_165183915_165184030_165186537_165186636_165188421_165188579_165188992_165189605_165191584_165191697_165192483_165192615_165193601_165193792_165194811_165194904_165196296_165196371_165197971_165198092_165207971_165208079_165209815_165209990_165210163_165210301_165211523_165211632_165214684_165214716_165214797_165214867_165218330_165218532_165223024_165223124_165223275
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190086	chrX	+	219	1	Intergenic	novelGene_5832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAGGTGAGGGGGAACA	NA	False	NA	NA	False	NA	NA	NA	165184563	165184782	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_165184600_165184800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190099	chrX	-	4040	5	FSM	ENSMUSG00000051224.14	ENSMUST00000112188.8	4050	5	10	0	10	0	multi-exon	FALSE	canonical	3	63	junction_2	3.35410196624968	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTATTCTCCAATATTT	NA	False	NA	-2	True	AATAAA	-20	NA	165293464	165282807	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_165286402_165288701_165288833_165290704_165290743_165291901_165292003_165293288
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190110	chrX	+	191	1	Intergenic	novelGene_5833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTCACTTAGCTAGTTA	NA	False	NA	NA	False	NA	NA	NA	165323741	165323932	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_+_165323700_165323900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190118	chrX	+	880	1	FSM	ENSMUSG00000067147.8	ENSMUST00000118791.2	801	1	-23	-56	-23	56	mono-exon	FALSE	NA	NA	NA	NA	NA	1010	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACATCAAATATTTATCTA	NA	False	NA	NA	False	ATTAAA	-12	NA	165637183	165638063	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_+_165637200_165638100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190130	chrX	-	619	3	FSM	ENSMUSG00000049775.17	ENSMUST00000112172.4	768	3	149	0	-17	0	multi-exon	FALSE	canonical	3	1191	junction_1	25.5	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTCTGCTTGGTGA	NA	False	NA	0	True	AATAAA	-15	NA	165992162	165990088	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_165990532_165990932_165991048_165992101
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190137	chrX	-	3706	7	FSM	ENSMUSG00000025742.6	ENSMUST00000026839.5	3699	7	-5	-2	-5	2	multi-exon	TRUE	canonical	3	187	junction_5	11.6535640709422	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTGTCATCCTTTTGGA	NA	False	NA	-1	True	AATAAA	-26	NA	166165750	166129315	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_166131995_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156998_166157183_166165465
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190164	chrX	-	2433	7	FSM	ENSMUSG00000031352.11	ENSMUST00000033717.9	2320	7	-113	0	-21	0	multi-exon	FALSE	canonical	3	290	junction_6	111.381351920129	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTAGAGTGATTTTTGT	NA	False	NA	0	True	AATAAA	-25	NA	168103389	168094525	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_168096019_168096583_168096671_168098597_168098718_168099541_168099691_168099991_168100144_168102433_168102587_168103110
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190169	chrX	-	2562	7	FSM	ENSMUSG00000031352.11	ENSMUST00000112115.2	2473	7	-89	0	-11	0	multi-exon	FALSE	canonical	3	158	junction_6	157.36096155725	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTAGAGTGATTTTTGT	NA	False	NA	0	True	AATAAA	-25	NA	168103379	168094525	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_chrX_-_168096019_168096583_168096671_168098597_168098718_168099541_168099691_168099991_168100144_168102433_168102587_168102971
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190189	chrX	+	2678	13	NNC	ENSMUSG00000035299.17	novel	3974	10	NA	NA	-15	-756	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	6.65989239152305	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACGGTCACTCAGGGTC	NA	False	NA	NA	False	NA	NA	NA	168662602	168772811	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrX_+_168662906_168709949_168710666_168749058_168749155_168759917_168760026_168764880_168765030_168766951_168767080_168767994_168768139_168768931_168769094_168770554_168770763_168771858_168772246_168772319_168772426_168772610_168772736_168772765
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190205	chrX_GL456233v2_random	-	2556	8	Intergenic	novelGene_5834	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	354	junction_1	19.1641672431246	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTTCTTTAATAAGTTC	NA	False	NA	1	True	AATAAA	-18	NA	134129	105701	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrX_GL456233v2_random_-_107510_109039_109133_116592_116661_119836_119928_123935_124074_125547_125606_127389_127545_133984
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190216	chrY	+	184	1	Intergenic	novelGene_5835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAGAAGTCAAGAGATTG	NA	False	NA	NA	False	NA	NA	NA	808135	808319	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrY_+_808100_808300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190218	chrY	+	186	1	Intergenic	novelGene_5836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTACAATTTATGCTGGG	NA	False	NA	NA	False	NA	NA	NA	1138947	1139133	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrY_+_1138900_1139100
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190219	chrY	+	187	1	Intergenic	novelGene_5837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATGAAACTACAAAATCT	NA	False	NA	NA	False	NA	NA	NA	1185607	1185794	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrY_+_1185600_1185800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190226	chrY	-	6966	1	Intergenic	novelGene_5838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	43886882	43879916	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrY_-_43879900_43886900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190238	chrY	+	191	1	Intergenic	novelGene_5839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGGTATCCAAACAATATAA	NA	False	NA	NA	False	NA	NA	NA	81108458	81108649	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	Intergenic_chrY_+_81108500_81108600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190255	chrY	+	1049	5	NNC	ENSMUSG00000096768.9	novel	708	5	NA	NA	-575	6	intron_retention	FALSE	canonical	3	234	junction_2	696.056211810512	101	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTGTGTGTCTTCCTT	3377	False	NA	NA	False	AATAAA	-24	NA	90795431	90827740	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrY_+_90795676_90795777_90795948_90796858_90797249_90804564_90804687_90827617
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190271	chrY	+	1858	5	NNC	ENSMUSG00000096768.9	novel	708	5	NA	NA	-553	6	intron_retention	TRUE	canonical	0	0	junction_2	752.144600459247	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTGTGTGTCTTCCTT	3399	False	NA	NA	False	AATAAA	-24	NA	90795453	90827740	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrY_+_90795676_90795777_90796126_90796205_90797249_90804564_90804687_90827617
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190275	chrY	+	1284	5	NNC	ENSMUSG00000096768.9	novel	887	5	NA	NA	-553	5937	intron_retention	FALSE	canonical	3	234	junction_2	136.850968209947	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGATGTGTGTGTGTC	3399	False	NA	NA	False	AATAAA	-18	NA	90795453	90833671	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrY_+_90795676_90795777_90795948_90796858_90797249_90804564_90804950_90833554
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190295	chrY	+	1004	4	NNC	ENSMUSG00000096768.9	novel	774	4	NA	NA	172	5937	intron_retention	FALSE	canonical	2	3	junction_1	843.874134901382	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGATGTGTGTGTGTC	4297	False	NA	NA	False	AATAAA	-18	NA	90796351	90833671	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrY_+_90796989_90797120_90797249_90804564_90804687_90833554
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190299	chrY	+	1401	3	NNC	ENSMUSG00000096768.9	novel	567	3	NA	NA	172	5939	intron_retention	FALSE	canonical	3	404	junction_2	101.5	85	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGATGTGTGTGTGTCTT	4297	False	NA	NA	False	AATAAA	-20	NA	90796351	90833673	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_chrY_+_90797249_90804564_90804950_90833554
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190313	SIRV1	-	1366	6	FSM	SIRV1A	SIRV103	1363	6	0	-3	0	3	multi-exon	FALSE	canonical	3	1304	junction_5	2022.74937646758	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGATGCATACTTCCTTCCT	NA	False	NA	NA	False	NA	NA	NA	10791	997	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10647
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190314	SIRV1	-	1565	6	FSM	SIRV1A	SIRV101	1561	6	-1	-3	-1	3	multi-exon	FALSE	canonical	3	1499	junction_5	1975.53128044078	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGATGCATACTTCCTTCCT	NA	False	NA	NA	False	NA	NA	NA	10787	997	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10444
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190315	SIRV1	-	977	3	FSM	SIRV1A	SIRV106	973	3	-1	-3	-1	3	multi-exon	FALSE	canonical	2	497	junction_2	204	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGATGCATACTTCCTTCCT	NA	False	NA	NA	False	NA	NA	NA	10787	997	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV1_-_1485_7552_7809_10553
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190345	SIRV1	-	1303	4	FSM	SIRV1A	SIRV102	1300	4	-1	-2	-1	2	multi-exon	FALSE	canonical	3	4191	junction_1	833.052752764727	1773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAATCGATGCATACTT	NA	False	NA	NA	False	NA	NA	NA	10367	1004	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV1_-_1485_6337_6814_7552_7815_10282
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190354	SIRV1	-	672	5	FSM	SIRV1A	SIRV105	670	5	-1	-1	-1	1	multi-exon	FALSE	canonical	3	1547	junction_4	2187.81237769604	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGGAAGTCAAAAGACTT	NA	False	NA	NA	False	NA	NA	NA	10641	6448	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV1_-_6474_6560_6814_7552_7815_10282_10367_10593
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190365	SIRV1	+	468	3	FSM	SIRV1B	SIRV109	464	3	-3	-1	-3	1	multi-exon	FALSE	canonical	3	3494	junction_2	198.5	451	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTTCGGCTAATCATGTT	NA	False	NA	NA	False	NA	NA	NA	10708	11644	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV1_+_10792_10882_11058_11434
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190376	SIRV10001	+	9941	1	FSM	SIRV10001A	SIRV10001	9941	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	344	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	9941	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV10001_+_0_9900
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190386	SIRV10002	+	10001	1	FSM	SIRV10002A	SIRV10002	10001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	10001	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV10002_+_0_10000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190400	SIRV10003	+	9970	1	FSM	SIRV10003A	SIRV10003	9970	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	9970	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV10003_+_0_10000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190401	SIRV12001	+	12029	1	FSM	SIRV12001A	SIRV12001	12029	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	12029	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV12001_+_0_12000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190410	SIRV12002	+	11999	1	FSM	SIRV12002A	SIRV12002	11999	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAGAAA	-36	NA	0	11999	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV12002_+_0_12000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190423	SIRV12003	+	12000	1	FSM	SIRV12003A	SIRV12003	12000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	12000	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV12003_+_0_12000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190426	SIRV2	-	2055	11	FSM	SIRV2A	SIRV201	2051	11	-1	-3	-1	3	multi-exon	FALSE	canonical	3	240	junction_6	997.649657946115	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAACGTGGCATGCGTAC	NA	False	NA	NA	False	NA	NA	NA	5908	997	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3375_3665_3826_3966_4095_4338_4480_4687_4801_5788
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190435	SIRV2	-	1972	11	FSM	SIRV2A	SIRV202	1971	11	0	-1	0	1	multi-exon	FALSE	canonical	3	173	junction_6	1003.16519576788	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCTCTATAGCTGTATCT	NA	False	NA	NA	False	NA	NA	NA	5911	1034	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3326_3665_3826_3966_4095_4338_4480_4687_4801_5788
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190448	SIRV2	+	525	1	FSM	SIRV2B	SIRV205	523	1	0	-2	0	2	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTCTACCGCTTCTTAC	NA	False	NA	NA	False	NA	NA	NA	1108	1633	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV2_+_1100_1600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190453	SIRV2	-	740	3	FSM	SIRV2A	SIRV204	740	3	0	0	0	0	multi-exon	FALSE	canonical	3	2423	junction_1	198	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTTATCCTATATCGGA	NA	False	NA	NA	False	NA	NA	NA	4732	3643	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV2_-_3826_3966_4480_4687
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190458	SIRV2	-	688	5	FSM	SIRV2A	SIRV203	686	5	-1	-1	-1	1	multi-exon	FALSE	canonical	3	2087	junction_4	259.923065540556	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGACGTGGACGTTTCA	NA	False	NA	NA	False	NA	NA	NA	5896	3664	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV2_-_3826_3966_4095_4338_4480_4687_4801_5751
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190471	SIRV2	+	425	1	FSM	SIRV2C	SIRV206	424	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAACACACTTCCATCCACT	NA	False	NA	NA	False	NA	NA	NA	4033	4458	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV2_+_4000_4500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190476	SIRV3	-	481	3	FSM	SIRV3B	SIRV308	479	3	0	-2	0	2	multi-exon	FALSE	canonical	3	5391	junction_1	17	856	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTGTATGGCGGACA	NA	False	NA	NA	False	NA	NA	NA	1982	998	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV3_-_1168_1532_1765_1902
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190485	SIRV3	+	2376	3	FSM	SIRV3A	SIRV306	2373	3	-2	-1	-2	1	multi-exon	FALSE	canonical	3	759	junction_2	1218.5	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACCTAACAGTAAAAGAGTC	NA	False	NA	NA	False	NA	NA	NA	1942	8293	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV3_+_2006_4003_4081_6057
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190490	SIRV3	+	2470	5	FSM	SIRV3A	SIRV301	2467	5	-1	-2	-1	2	multi-exon	FALSE	canonical	3	1234	junction_3	576.603416569829	973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAACGTCTCGTAAGACGG	NA	False	NA	NA	False	NA	NA	NA	1943	8941	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV3_+_2006_4568_4780_6057_7989_8127_8208_8755
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190505	SIRV3	+	1809	2	FSM	SIRV3A	SIRV302	1807	2	-1	-1	-1	1	multi-exon	FALSE	canonical	3	834	junction_1	0	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTAACAGGTTCTCAACC	NA	False	NA	NA	False	NA	NA	NA	1962	7823	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV3_+_2006_6057
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190506	SIRV3	+	782	5	FSM	SIRV3A	SIRV307	779	5	-1	-2	-1	2	multi-exon	FALSE	canonical	3	1252	junction_4	794.143052289699	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAACGTCTCGTAAGACGG	NA	False	NA	NA	False	NA	NA	NA	1962	8941	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV3_+_2006_4003_4081_4574_4775_6057_6334_8755
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190521	SIRV3	+	438	3	FSM	SIRV3A	SIRV305	436	3	-1	-1	-1	1	multi-exon	FALSE	canonical	3	1609	junction_2	828.5	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAATCTTAATAGACGATTT	NA	False	NA	NA	False	NA	NA	NA	4002	6719	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV3_+_4081_4568_4780_6570
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190532	SIRV3	-	164	1	FSM	SIRV3D	SIRV311	161	1	0	-3	0	3	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAGATTTCGACTTTTA	NA	False	NA	NA	False	NA	NA	NA	4762	4598	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV3_-_4600_4800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190540	SIRV3	+	2236	1	NIC	SIRV3A	novel	2467	5	NA	NA	2053	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACCTAACAGTAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	6056	8292	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NIC_SIRV3_+_6100_8300
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190547	SIRV3	-	591	3	FSM	SIRV3C	SIRV310	589	3	0	-2	0	2	multi-exon	FALSE	canonical	3	1245	junction_2	66	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGTTTTGGGTACTGG	NA	False	NA	NA	False	NA	NA	NA	9914	8757	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV3_-_8967_9189_9325_9667
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190558	SIRV3	-	797	3	FSM	SIRV3C	SIRV309	796	3	0	-1	0	1	multi-exon	FALSE	canonical	3	1394	junction_2	16	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTCAAATATCTGTGTCC	NA	False	NA	NA	False	CATAAA	-22	NA	9943	8796	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV3_-_8976_9189_9299_9434
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190566	SIRV4	+	1570	3	FSM	SIRV4C	SIRV409	1567	3	-2	-1	-2	1	multi-exon	FALSE	canonical	3	1019	junction_2	11.5	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGTAACCTGTCAAGT	NA	False	NA	NA	False	NA	NA	NA	998	3404	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV4_+_1347_1678_1886_2389
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190575	SIRV4	+	953	2	FSM	SIRV4C	SIRV410	950	2	-2	-1	-2	1	multi-exon	FALSE	canonical	3	1621	junction_1	0	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTATATGTTGTTGCTGC	NA	False	NA	NA	False	NA	NA	NA	1453	2772	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV4_+_1886_2251
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190586	SIRV4	-	621	2	FSM	SIRV4B	SIRV406	617	2	0	-4	0	4	multi-exon	FALSE	canonical	3	2584	junction_1	0	463	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATAGCCTGTTAAC	NA	False	NA	NA	False	NA	NA	NA	5158	3633	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV4_-_4104_5007
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190596	SIRV4	-	595	4	FSM	SIRV4A	SIRV404	592	4	-1	-2	-1	2	multi-exon	FALSE	canonical	3	669	junction_3	2787.93595494747	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATATTTAGAGCGTATG	NA	False	NA	NA	False	NA	NA	NA	14624	8320	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV4_-_8373_8629_8991_13672_13823_14592
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190605	SIRV4	-	628	2	FSM	SIRV4A	SIRV405	626	2	-1	-1	-1	1	multi-exon	FALSE	canonical	3	7498	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCTCTTTTCAGCAAGA	NA	False	NA	NA	False	NA	NA	NA	13938	8628	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV4_-_8991_13672
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190619	SIRV4001	+	3997	1	FSM	SIRV4001A	SIRV4001	3997	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1297	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	3997	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV4001_+_0_4000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190629	SIRV4002	+	3999	1	FSM	SIRV4002A	SIRV4002	3999	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4022	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	3999	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV4002_+_0_4000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190635	SIRV4003	+	4001	1	FSM	SIRV4003A	SIRV4003	4001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1705	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	TATAAA	-45	NA	0	4001	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV4003_+_0_4000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190645	SIRV5	+	2032	16	FSM	SIRV5A	SIRV505	2029	16	-1	-2	-1	2	multi-exon	FALSE	canonical	3	5578	junction_10	1970.92572045614	4326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACCGCCAAAAAATGGGAG	NA	False	NA	NA	False	NA	NA	NA	999	10993	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190650	SIRV5	+	2031	16	NNC	SIRV5A	novel	2029	16	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	2797.28762593735	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1000	10991	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_SIRV5_+_1150_1985_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190661	SIRV5	+	547	2	FSM	SIRV5A	SIRV511	546	2	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_1	0	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTACGGCCAGTTTAGCC	NA	False	NA	NA	False	AATGAA	-18	NA	1008	2399	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV5_+_1144_1987
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190670	SIRV5	+	553	2	FSM	SIRV5A	SIRV506	552	2	0	-1	0	1	multi-exon	FALSE	canonical	3	11478	junction_1	0	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTACGGCCAGTTTAGCC	NA	False	NA	NA	False	AATGAA	-18	NA	1008	2399	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV5_+_1150_1987
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190671	SIRV5	+	2086	17	FSM	SIRV5A	SIRV508	2085	17	0	-1	0	1	multi-exon	FALSE	canonical	3	2297	junction_10	2773.74385702339	1426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACCGCCAAAAAATGGGA	NA	False	NA	NA	False	NA	NA	NA	1008	10992	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190691	SIRV5	+	1987	18	FSM	SIRV5A	SIRV502	1984	18	0	-3	0	1	multi-exon	FALSE	canonical	3	681	junction_4	3430.92271124242	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACCGCCAAAAAATGGGA	NA	False	NA	NA	False	NA	NA	NA	1019	10992	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2489_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190702	SIRV5	+	2478	18	FSM	SIRV5A	SIRV510	2474	18	-1	-3	0	3	multi-exon	FALSE	canonical	3	1532	junction_17	2924.81329602575	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTAACCTTGGTAACTTCG	NA	False	NA	NA	False	AGTAAA	-14	NA	1027	11870	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858_10992_11133
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190704	SIRV5	+	534	6	FSM	SIRV5A	SIRV507	533	6	0	-1	0	1	multi-exon	FALSE	canonical	3	3871	junction_1	2708.37786137754	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTAAGTGGTCAAGCCACG	NA	False	NA	NA	False	NA	NA	NA	1027	3599	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV5_+_1150_1925_2034_2119_2157_2270_2316_3298_3405_3483
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190719	SIRV5	+	1893	17	FSM	SIRV5A	SIRV501	1890	17	-2	-1	-2	1	multi-exon	FALSE	canonical	3	1808	junction_14	3064.59256060247	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACCGCCAAAAAATGGGA	NA	False	NA	NA	False	NA	NA	NA	1054	10992	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV5_+_1150_1987_2034_2119_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190729	SIRV5	-	230	1	FSM	SIRV5B	SIRV512	229	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACATGTTAGACCTTTAC	NA	False	NA	NA	False	AATATA	-24	NA	2406	2176	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV5_-_2200_2400
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190736	SIRV5	+	520	2	ISM	SIRV5A	SIRV503	526	3	-1	149	-1	2	5prime_fragment	FALSE	canonical	3	11825	junction_1	0	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACCGCCAAAAAATGGGAG	NA	False	NA	NA	False	NA	NA	NA	8200	10993	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	ISM_SIRV5_+_8586_10858
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190746	SIRV5	+	886	4	FSM	SIRV5A	SIRV509	885	4	0	-1	0	0	multi-exon	FALSE	canonical	3	1024	junction_3	4608.45413946538	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAGTAACCTTGGTAACT	NA	False	NA	NA	False	AGTAAA	-11	NA	8315	11867	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV5_+_8382_8454_8586_10858_10992_11311
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190761	SIRV5	+	2476	1	FSM	SIRV5A	SIRV504	2473	1	-1	-2	-1	2	mono-exon	FALSE	NA	NA	NA	NA	NA	776	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTAAAACATTTGTTAC	NA	False	NA	NA	False	NA	NA	NA	11132	13608	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV5_+_11100_13600
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190763	SIRV6	+	1440	9	FSM	SIRV6A	SIRV601	1435	9	-1	-4	-1	4	multi-exon	TRUE	canonical	3	2056	junction_3	7596.8547757855	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCGGGAGTATACTTAGTT	NA	False	NA	NA	False	NA	NA	NA	999	11830	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV6_+_1187_1468_1535_1640_1736_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190776	SIRV6	+	1540	10	FSM	SIRV6A	SIRV612	1528	10	0	-12	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7772.9807349673	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATACTTAGTTCAATCTT	NA	False	NA	NA	False	NA	NA	NA	1087	11837	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190778	SIRV6	+	1539	10	FSM	SIRV6A	SIRV604	1537	10	0	-2	0	2	multi-exon	TRUE	canonical	0	0	junction_4	9140.21704229429	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTTAGTTCAATCTTCA	NA	False	NA	NA	False	NA	NA	NA	1087	11839	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11034_11109_11205
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190793	SIRV6	+	576	8	FSM	SIRV6A	SIRV602	574	8	0	-2	0	2	multi-exon	FALSE	canonical	3	8561	junction_3	5767.41567350754	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGCCTAATTGTTGGTAA	NA	False	NA	NA	False	NA	NA	NA	1124	11281	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV6_+_1187_1468_1535_1640_1736_2780_2829_3106_3165_10724_10819_11031_11109_11205
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190804	SIRV6	+	576	8	NNC	SIRV6A	novel	574	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8692.54531897585	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGCCTAATTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	1124	11279	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_SIRV6_+_1189_1468_1535_1640_1736_2780_2829_3106_3165_10724_10819_11031_11109_11205
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190811	SIRV6	+	576	4	FSM	SIRV6A	SIRV607	574	4	0	-2	0	2	multi-exon	FALSE	canonical	0	0	junction_3	10529.1711924538	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCAGTCAAGTCGTAGTC	NA	False	NA	NA	False	NA	NA	NA	1130	2542	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV6_+_1187_1468_1736_1845_2027_2470
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190815	SIRV6	+	1089	9	FSM	SIRV6A	SIRV605	1088	9	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_4	8239.38325968637	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAGCAATCAACTCACC	NA	False	NA	NA	False	NA	NA	NA	1130	11332	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190827	SIRV6	+	1090	9	NNC	SIRV6A	novel	1088	9	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	9510.43343846641	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGCAATCAACTCAC	NA	False	NA	NA	False	NA	NA	NA	1130	11331	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_SIRV6_+_1189_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190831	SIRV6	+	488	4	FSM	SIRV6A	SIRV609	485	4	-2	-1	-2	1	multi-exon	FALSE	canonical	3	15063	junction_3	5493.41668626083	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAAGTCAAGCCATTGCC	NA	False	NA	NA	False	NA	NA	NA	1135	2121	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190841	SIRV6	+	488	4	NNC	SIRV6A	novel	485	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11260.4577270297	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAAGTCAAGCCATTGC	NA	False	NA	NA	False	NA	NA	NA	1136	2120	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	NNC_SIRV6_+_1189_1468_1535_1640_1736_1845
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190844	SIRV6	+	457	3	FSM	SIRV6A	SIRV611	454	3	-2	-1	-2	1	multi-exon	FALSE	canonical	3	2656	junction_1	12443	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGTGTTTATAGTTTAC	NA	False	NA	NA	False	NA	NA	NA	1301	1951	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV6_+_1382_1468_1535_1640
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190856	SIRV6	-	279	1	FSM	SIRV6B	SIRV617	276	1	-1	-2	-1	2	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTACTTGGGCACCTTG	NA	False	NA	NA	False	NA	NA	NA	1821	1542	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV6_-_1500_1800
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190861	SIRV6	+	533	4	FSM	SIRV6A	SIRV616	531	4	-1	-1	-1	1	multi-exon	FALSE	canonical	3	918	junction_2	7304.14215816386	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGAAAAAGTAATAGTGCA	NA	False	NA	NA	False	NA	NA	NA	2284	10789	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV6_+_2621_2740_2815_3106_3165_10724
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190862	SIRV6	+	1353	5	FSM	SIRV6A	SIRV610	1163	5	-188	-2	-1	2	multi-exon	FALSE	canonical	3	12902	junction_1	2966.72052736688	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAAATGGGGTTTGCCGA	NA	False	NA	NA	False	ATTAAA	-7	NA	2284	11692	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV6_+_2621_2740_2829_3106_3165_10724_11109_11205
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190885	SIRV6	-	190	1	FSM	SIRV6C	SIRV618	189	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTCTAGCTGTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	2547	2357	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV6_-_2400_2500
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190891	SIRV6	+	462	5	FSM	SIRV6A	SIRV614	459	5	0	-3	0	3	multi-exon	FALSE	canonical	3	2976	junction_3	7392.30118095847	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACTGTATCGGAGACG	NA	False	NA	NA	False	AAAAAG	-20	NA	2516	10818	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV6_+_2621_2740_2829_3106_3165_7805_7924_10724
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190898	SIRV6	+	378	4	FSM	SIRV6A	SIRV608	377	4	-1	0	-1	0	multi-exon	FALSE	canonical	3	18415	junction_1	2118.18355095954	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTATTAGCCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	3022	11270	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV6_+_3165_10724_10819_11031_11109_11205
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190907	SIRV6	+	1313	6	FSM	SIRV6A	SIRV613	1311	6	-1	-1	-1	0	multi-exon	FALSE	canonical	3	472	junction_2	9686.74001715748	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGACCGGGAGTATACT	NA	False	NA	NA	False	NA	NA	NA	3104	11825	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV6_+_3165_7104_7449_7805_7924_10724_10819_11031_11109_11205
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190917	SIRV6	+	1972	1	FSM	SIRV6A	SIRV603	1969	1	-1	-2	-1	2	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGATTTCGACCGAATA	NA	False	NA	NA	False	ATTAAA	-28	NA	8998	10970	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV6_+_9000_11000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190926	SIRV6	+	784	3	FSM	SIRV6A	SIRV615	783	3	0	-1	0	0	multi-exon	FALSE	canonical	3	18822	junction_2	2138	1796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGCAATCAACTCAC	NA	False	NA	NA	False	NA	NA	NA	10237	11331	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV6_+_10819_11031_11109_11205
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190944	SIRV6001	+	6000	1	FSM	SIRV6001A	SIRV6001	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1535	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV6001_+_0_6000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190949	SIRV6002	+	6000	1	FSM	SIRV6002A	SIRV6002	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1226	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV6002_+_0_6000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190965	SIRV6003	+	6000	1	FSM	SIRV6003A	SIRV6003	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	412	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV6003_+_0_6000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190967	SIRV7	-	2500	5	FSM	SIRV7A	SIRV703	2498	5	0	-2	0	2	multi-exon	FALSE	canonical	3	1087	junction_2	1651.92015167199	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTTAATATGAATCAACTC	NA	False	NA	NA	False	TATAAA	-24	NA	147918	998	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV7_-_2676_2993_3112_3809_3897_114680_114989_147608
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190968	SIRV7	-	2249	6	FSM	SIRV7A	SIRV702	2247	6	0	-2	0	2	multi-exon	FALSE	canonical	3	229	junction_3	1351.00954844886	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTTAATATGAATCAACTC	NA	False	NA	NA	False	TATAAA	-24	NA	114916	998	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV7_-_2676_2993_3112_4095_4180_4725_4811_43028_43078_114680
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000190997	SIRV7	-	2466	5	FSM	SIRV7A	SIRV701	2462	5	-2	-2	0	-1	multi-exon	FALSE	canonical	3	1923	junction_2	1231.81783860277	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGTGTTAATATGAATCAA	NA	False	NA	NA	False	TATAAA	-21	NA	147925	1001	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV7_-_2676_2993_3112_43028_43078_114680_114989_147608
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000191004	SIRV7	-	429	3	FSM	SIRV7A	SIRV704	428	3	0	-1	0	1	multi-exon	FALSE	canonical	3	4944	junction_1	1233	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCGTATTTGCTGCTT	NA	False	NA	NA	False	ATTAAA	-34	NA	114738	55848	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV7_-_56098_78841_78964_114680
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000191013	SIRV7	-	951	5	FSM	SIRV7A	SIRV706	949	5	-1	-1	-1	1	multi-exon	FALSE	canonical	3	3147	junction_1	1522.61994601411	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGAGATCGACGAAGTTA	NA	False	NA	NA	False	NA	NA	NA	147958	56030	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV7_-_56098_70883_70988_78841_78964_114680_114989_147608
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000191022	SIRV7	-	896	6	FSM	SIRV7A	SIRV708	889	6	-1	-6	-1	0	multi-exon	FALSE	canonical	0	0	junction_4	1573.00102987887	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGAGATCGACGAAGTT	NA	False	NA	NA	False	NA	NA	NA	147958	56031	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV7_-_56098_70883_70988_78841_78909_78928_78964_114686_114961_147608
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000191036	SIRV8001	+	8001	1	FSM	SIRV8001A	SIRV8001	8001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1834	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8001	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV8001_+_0_8000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000191047	SIRV8002	+	8000	1	FSM	SIRV8002A	SIRV8002	8000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1837	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8000	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV8002_+_0_8000
pacBioSII_SmartSeq2_Mouse_MpreCap_0+_F121-9_Total_Maxima.NAM_TM_000000191050	SIRV8003	+	8000	1	FSM	SIRV8003A	SIRV8003	8000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	516	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8000	ES_cDNA_PacBio	iso_detect_ref_crg_cDNA_PacBio	FSM_SIRV8003_+_0_8000
